Query 034652
Match_columns 88
No_of_seqs 103 out of 150
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 07:58:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034652.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034652hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cp9_A EF-TS, EF-TSMT, elongat 88.1 0.061 2.1E-06 32.8 -0.9 28 57-84 23-50 (64)
2 3mk7_C Cytochrome C oxidase, C 77.8 16 0.00053 26.7 8.4 47 33-80 52-111 (311)
3 1aip_C EF-TS, elongation facto 72.4 0.58 2E-05 33.9 -0.6 27 58-84 18-44 (196)
4 3lcn_C MRNA transport factor G 67.8 7.2 0.00025 20.2 3.2 24 59-82 2-25 (29)
5 4hat_B RAN-specific GTPase-act 67.0 4.5 0.00015 27.3 3.0 25 56-81 115-139 (140)
6 1t1v_A SH3BGRL3, SH3 domain-bi 65.0 4.2 0.00014 24.1 2.3 31 55-87 6-36 (93)
7 3ph0_A ASCE; type III secretio 58.8 12 0.0004 22.9 3.5 25 58-82 10-34 (67)
8 2lqo_A Putative glutaredoxin R 58.4 4 0.00014 25.1 1.4 25 55-87 8-32 (92)
9 3u66_A SCIP/TSSL, putative typ 56.4 41 0.0014 23.3 6.5 51 36-87 8-58 (183)
10 3dhx_A Methionine import ATP-b 55.5 6.4 0.00022 24.8 2.0 18 70-87 76-93 (106)
11 1gng_X Frattide, glycogen synt 53.6 14 0.00048 20.3 2.9 22 63-84 14-38 (39)
12 2lqu_A Decorin-binding protein 53.2 17 0.00057 25.8 4.0 26 62-87 13-38 (168)
13 2o6n_A RH4B designed peptide; 51.9 17 0.0006 19.2 3.0 18 62-79 16-33 (35)
14 1jb0_J Photosystem 1 reaction 50.6 8.7 0.0003 21.4 1.8 22 1-22 1-22 (41)
15 1u6t_A SH3 domain-binding glut 49.6 9.7 0.00033 25.1 2.2 31 55-87 4-34 (121)
16 1xb2_B EF-TS, elongation facto 49.3 2.8 9.5E-05 31.7 -0.6 28 57-84 18-49 (291)
17 3ouv_A Serine/threonine protei 48.8 11 0.00038 21.5 2.2 16 71-86 17-32 (71)
18 1mhq_A ADP-ribosylation factor 48.5 15 0.00052 24.5 3.1 27 52-87 113-139 (148)
19 2ct6_A SH3 domain-binding glut 48.3 10 0.00035 23.5 2.1 31 55-87 12-42 (111)
20 3msz_A Glutaredoxin 1; alpha-b 47.9 13 0.00044 20.8 2.3 24 55-86 8-31 (89)
21 3m1i_B RAN-specific GTPase-act 47.5 16 0.00054 26.1 3.2 25 56-81 166-190 (191)
22 2kxe_A DNA polymerase II small 47.3 8.5 0.00029 23.9 1.5 15 73-87 55-69 (75)
23 1xke_A RAN-binding protein 2; 47.0 12 0.0004 24.6 2.3 25 56-81 99-123 (130)
24 3ced_A Methionine import ATP-b 46.6 11 0.00037 23.4 2.0 17 71-87 77-93 (98)
25 2qrr_A Methionine import ATP-b 46.2 11 0.00038 23.2 2.0 18 70-87 78-95 (101)
26 1aba_A Glutaredoxin; electron 45.8 13 0.00044 21.5 2.1 24 55-86 4-31 (87)
27 1fxk_C Protein (prefoldin); ar 45.2 8 0.00027 24.9 1.2 31 51-81 76-106 (133)
28 2qsw_A Methionine import ATP-b 45.0 12 0.00041 23.0 2.0 18 70-87 78-95 (100)
29 1j8b_A YBAB; hypothetical prot 44.5 9.6 0.00033 24.8 1.5 29 57-85 9-37 (112)
30 1zth_A RIO1 serine protein kin 43.9 21 0.0007 24.6 3.3 37 51-87 211-247 (258)
31 1xg2_B Pectinesterase inhibito 43.9 12 0.00042 23.7 2.0 27 57-83 71-97 (153)
32 1k5d_B RAN-specific GTPase-act 43.6 19 0.00066 25.7 3.2 26 56-82 140-165 (201)
33 2y7c_A Type-1 restriction enzy 43.2 24 0.00081 25.7 3.7 21 63-83 438-458 (464)
34 1uwd_A Hypothetical protein TM 42.9 12 0.00042 23.1 1.8 20 56-76 50-69 (103)
35 1x91_A Invertase/pectin methyl 42.7 13 0.00045 23.7 2.0 27 57-83 71-97 (153)
36 3ic4_A Glutaredoxin (GRX-1); s 41.8 15 0.00053 21.0 2.1 24 55-86 16-39 (92)
37 1ddw_A GLGF-domain protein hom 41.6 21 0.00071 23.4 2.8 26 56-82 88-113 (120)
38 3twe_A Alpha4H; unknown functi 41.6 31 0.0011 17.3 2.9 16 65-80 3-18 (27)
39 2cj4_A Invertase inhibitor; pr 40.8 8.7 0.0003 24.6 0.9 26 57-82 72-98 (150)
40 3lno_A Putative uncharacterize 40.5 16 0.00053 23.0 2.1 21 55-76 51-71 (108)
41 3gkx_A Putative ARSC family re 40.2 18 0.00062 23.0 2.4 25 55-87 8-32 (120)
42 3iu6_A Protein polybromo-1; PB 39.6 33 0.0011 23.5 3.7 26 63-88 93-118 (147)
43 1ybx_A Conserved hypothetical 39.5 19 0.00066 24.6 2.5 29 57-85 42-70 (143)
44 2zdi_C Prefoldin subunit alpha 39.4 11 0.00037 25.0 1.2 31 51-81 86-116 (151)
45 3f0i_A Arsenate reductase; str 39.2 19 0.00066 22.9 2.4 25 55-87 8-32 (119)
46 3avx_A Elongation factor TS, e 39.2 3.4 0.00012 37.1 -1.7 29 57-85 19-47 (1289)
47 3rri_A Glyoxalase/bleomycin re 38.8 22 0.00074 21.2 2.5 17 70-86 79-95 (135)
48 1xqa_A Glyoxalase/bleomycin re 38.8 29 0.00099 19.9 3.0 18 70-87 72-89 (113)
49 3r3p_A MobIle intron protein; 38.7 14 0.0005 23.3 1.7 37 47-83 67-104 (105)
50 3fau_A NEDD4-binding protein 2 38.3 42 0.0014 19.7 3.7 25 60-84 9-34 (82)
51 1i2h_A PSD-ZIP45(homer-1C/VESL 37.3 32 0.0011 24.0 3.4 24 57-81 94-117 (168)
52 2hl0_A Threonyl-tRNA synthetas 37.2 27 0.00091 24.0 2.9 23 61-86 90-112 (143)
53 3rdw_A Putative arsenate reduc 36.9 21 0.0007 22.8 2.2 25 55-87 9-33 (121)
54 2zvf_A Alanyl-tRNA synthetase; 36.9 33 0.0011 22.5 3.3 22 59-80 28-49 (171)
55 4f4l_A ION transport protein; 36.6 31 0.001 21.7 3.0 21 37-57 74-94 (112)
56 1fov_A Glutaredoxin 3, GRX3; a 36.6 21 0.00073 19.6 2.1 24 55-86 5-28 (82)
57 3fz4_A Putative arsenate reduc 36.5 18 0.00061 23.1 1.9 25 55-87 7-31 (120)
58 3uh9_A Metallothiol transferas 36.4 28 0.00097 21.1 2.8 18 70-87 74-91 (145)
59 2d9e_A Peregrin; four-helix bu 36.3 44 0.0015 21.3 3.8 35 53-87 77-119 (121)
60 1s3c_A Arsenate reductase; ARS 36.2 23 0.00077 23.3 2.4 25 55-87 6-30 (141)
61 2dpr_A CON-T(K7GLA); conantoxi 35.9 29 0.00099 17.3 2.2 16 62-77 2-17 (26)
62 1s5l_U Photosystem II 12 kDa e 35.1 8 0.00027 26.4 0.0 22 1-22 1-23 (134)
63 2ec1_A Nucleoporin 50 kDa; ran 35.1 28 0.00095 22.7 2.7 16 62-77 109-124 (125)
64 3dlo_A Universal stress protei 34.9 39 0.0013 21.3 3.3 26 62-87 70-95 (155)
65 3e5d_A Putative glyoxalase I; 34.7 28 0.00096 20.1 2.5 17 70-86 83-99 (127)
66 3h8q_A Thioredoxin reductase 3 34.5 26 0.00088 21.4 2.3 24 55-86 21-44 (114)
67 1juq_A ADP-ribosylation factor 34.4 33 0.0011 23.4 3.1 22 58-87 130-151 (171)
68 3nr7_A DNA-binding protein H-N 34.3 26 0.00088 21.9 2.3 23 66-88 55-77 (86)
69 1n08_A Putative riboflavin kin 34.1 30 0.001 23.8 2.8 27 56-82 124-150 (163)
70 3ewt_E Tumor necrosis factor r 34.0 35 0.0012 16.9 2.3 14 71-84 12-25 (25)
71 3lor_A Thiol-disulfide isomera 33.7 17 0.00058 22.3 1.4 31 56-86 37-67 (160)
72 2a4x_A Mitomycin-binding prote 33.5 29 0.001 20.9 2.5 16 71-86 84-99 (138)
73 2rk0_A Glyoxalase/bleomycin re 33.3 33 0.0011 20.5 2.7 18 70-87 84-101 (136)
74 2wg5_A General control protein 32.9 44 0.0015 21.3 3.3 20 62-81 13-32 (109)
75 1r73_A TM1492, 50S ribosomal p 32.8 31 0.0011 20.3 2.4 17 65-81 11-27 (66)
76 2khp_A Glutaredoxin; thioredox 32.5 31 0.001 19.6 2.3 24 55-86 10-33 (92)
77 2d9i_A NEDD4-binding protein 2 32.4 57 0.002 19.7 3.7 25 60-84 17-42 (96)
78 1z3e_A Regulatory protein SPX; 32.4 26 0.00088 22.3 2.1 24 55-86 5-28 (132)
79 2kok_A Arsenate reductase; bru 31.9 24 0.00081 22.1 1.9 25 55-87 9-33 (120)
80 3s3t_A Nucleotide-binding prot 31.6 44 0.0015 20.1 3.1 24 63-86 62-86 (146)
81 3lay_A Zinc resistance-associa 31.5 39 0.0013 23.5 3.1 22 61-82 111-132 (175)
82 3qmx_A Glutaredoxin A, glutare 31.3 28 0.00096 21.0 2.1 24 55-86 20-43 (99)
83 3v2d_2 50S ribosomal protein L 31.2 34 0.0012 20.5 2.4 17 65-81 18-34 (72)
84 2z8f_A Galacto-N-biose/lacto-N 31.1 48 0.0016 23.9 3.6 25 60-87 387-411 (412)
85 3j21_W 50S ribosomal protein L 30.8 35 0.0012 20.5 2.4 17 65-81 11-27 (72)
86 1nd9_A Translation initiation 30.7 20 0.00067 18.7 1.1 23 62-84 6-28 (49)
87 1ykh_B RNA polymerase II holoe 30.6 48 0.0016 21.9 3.3 17 65-81 94-110 (132)
88 3idf_A USP-like protein; unive 30.4 56 0.0019 19.5 3.4 22 66-87 62-83 (138)
89 1r7h_A NRDH-redoxin; thioredox 30.4 37 0.0013 18.1 2.3 23 56-86 6-28 (75)
90 1whg_A Tubulin specific chaper 30.0 56 0.0019 21.3 3.5 32 57-88 6-37 (113)
91 2rkl_A Vacuolar protein sortin 29.8 26 0.0009 20.3 1.6 19 54-72 29-47 (53)
92 2rbb_A Glyoxalase/bleomycin re 29.7 33 0.0011 20.7 2.2 17 70-86 87-103 (141)
93 3r8s_Y 50S ribosomal protein L 29.6 30 0.001 20.2 1.9 17 65-81 11-27 (63)
94 1nb0_A Hypothetical protein FL 29.5 31 0.0011 23.3 2.3 26 56-81 106-131 (147)
95 3bnw_A Riboflavin kinase, puta 29.2 39 0.0013 23.7 2.8 26 56-81 128-153 (181)
96 3f42_A Protein HP0035; helicob 29.1 40 0.0014 21.4 2.6 20 66-85 13-32 (99)
97 2l3l_A Tubulin-specific chaper 29.1 38 0.0013 21.9 2.5 24 59-82 87-110 (111)
98 1l2p_A ATP synthase B chain; a 28.8 47 0.0016 18.4 2.6 18 63-80 43-60 (61)
99 1vq8_V 50S ribosomal protein L 28.7 40 0.0014 20.1 2.4 17 65-81 14-30 (71)
100 3m1f_V VOPL, putative uncharac 28.7 28 0.00095 18.2 1.4 15 60-74 1-15 (31)
101 3gkn_A Bacterioferritin comigr 28.7 63 0.0022 19.9 3.5 27 59-86 46-72 (163)
102 3mdm_A Cholesterol 24-hydroxyl 28.7 59 0.002 23.4 3.8 28 48-75 260-287 (456)
103 3nm9_A HMG-D, high mobility gr 28.7 65 0.0022 18.2 3.3 22 62-83 52-73 (73)
104 1yke_B RNA polymerase II holoe 28.7 53 0.0018 22.3 3.3 15 66-80 95-109 (151)
105 1j1l_A Pirin; beta sandwich, c 28.6 35 0.0012 25.3 2.6 14 69-82 261-274 (290)
106 1egx_A VAsp, vasodilator-stimu 28.6 57 0.0019 20.9 3.3 23 57-80 92-114 (115)
107 2guz_A Mitochondrial import in 28.6 52 0.0018 18.9 2.9 20 66-85 51-70 (71)
108 3qth_A Uncharacterized protein 28.5 36 0.0012 23.8 2.5 48 35-82 50-102 (176)
109 3faj_A ORF131, putative unchar 28.4 14 0.00049 25.4 0.4 31 57-87 67-97 (151)
110 3ghj_A Putative integron gene 28.4 27 0.00093 21.4 1.7 17 70-86 96-112 (141)
111 3kol_A Oxidoreductase, glyoxal 28.4 25 0.00085 21.1 1.5 16 71-86 108-123 (156)
112 3ey7_A Biphenyl-2,3-DIOL 1,2-d 28.2 24 0.00082 20.6 1.3 17 71-87 83-99 (133)
113 3htk_A Structural maintenance 28.2 32 0.0011 19.2 1.8 22 59-80 15-36 (60)
114 1qc6_A EVH1 domain from ENA/VA 28.0 37 0.0013 22.1 2.3 26 56-82 90-115 (130)
115 3rmu_A Methylmalonyl-COA epime 28.0 30 0.001 19.9 1.7 16 71-86 87-102 (134)
116 1h1j_S THO1 protein; SAP domai 27.5 43 0.0015 18.9 2.3 16 72-87 10-25 (51)
117 2jp2_A Spred-2, sprouty-relate 27.1 55 0.0019 21.5 3.1 25 56-81 102-126 (126)
118 3ovp_A Ribulose-phosphate 3-ep 26.8 42 0.0014 23.6 2.6 26 51-76 196-221 (228)
119 2kjz_A ATC0852; protein of unk 26.8 50 0.0017 20.4 2.7 18 70-87 98-115 (144)
120 3r4q_A Lactoylglutathione lyas 26.8 45 0.0015 20.9 2.5 18 70-87 88-105 (160)
121 2p25_A Glyoxalase family prote 26.7 34 0.0012 19.6 1.9 17 71-87 83-99 (126)
122 1twu_A Hypothetical protein YY 26.7 42 0.0014 20.2 2.3 18 70-87 89-106 (139)
123 1npb_A Fosfomycin-resistance p 26.6 42 0.0014 20.2 2.3 17 70-86 75-91 (141)
124 3uek_A Poly(ADP-ribose) glycoh 26.6 30 0.001 28.7 2.0 28 56-88 512-539 (588)
125 2qn6_B Translation initiation 26.4 54 0.0019 20.5 2.8 31 56-86 58-88 (93)
126 1mjh_A Protein (ATP-binding do 26.3 61 0.0021 19.9 3.1 22 66-87 79-100 (162)
127 2wh0_Q Pkcev3, protein kinase 26.0 53 0.0018 16.9 2.2 17 59-75 9-25 (31)
128 3n7c_A ABR034WP; nuclear pore 25.9 53 0.0018 21.5 2.9 18 62-79 105-122 (130)
129 3jr7_A Uncharacterized EGV fam 25.9 41 0.0014 24.7 2.5 20 56-75 251-270 (298)
130 3l7t_A SMU.1112C, putative unc 25.7 32 0.0011 19.8 1.6 17 71-87 91-107 (134)
131 1nki_A Probable fosfomycin res 25.6 45 0.0015 19.9 2.3 17 70-86 72-88 (135)
132 1iur_A KIAA0730 protein; DNAJ 25.6 86 0.0029 19.0 3.6 23 60-82 51-73 (88)
133 4a0d_A Poly(ADP-ribose) glycoh 25.5 32 0.0011 27.9 2.0 27 56-87 455-481 (531)
134 3gl3_A Putative thiol:disulfid 25.4 53 0.0018 19.7 2.6 30 56-86 35-64 (152)
135 2vvp_A Ribose-5-phosphate isom 25.4 34 0.0012 23.7 1.8 25 61-88 10-34 (162)
136 3cq1_A Putative uncharacterize 25.3 17 0.00058 22.4 0.3 20 56-76 49-68 (103)
137 3ct8_A Protein BH2160, putativ 25.2 53 0.0018 20.2 2.7 18 70-87 98-115 (146)
138 2a19_B Interferon-induced, dou 25.2 79 0.0027 20.9 3.7 31 42-72 201-231 (284)
139 2oqm_A Hypothetical protein; s 25.1 40 0.0014 24.0 2.2 27 56-82 95-121 (192)
140 1nm3_A Protein HI0572; hybrid, 25.1 38 0.0013 22.9 2.1 25 55-87 174-198 (241)
141 3r8s_S 50S ribosomal protein L 25.0 83 0.0028 20.0 3.6 27 62-88 41-68 (110)
142 3nxu_A Cytochrome P450 3A4; al 24.9 59 0.002 23.6 3.2 28 48-75 289-316 (485)
143 3fdj_A DEGV family protein; GU 24.8 45 0.0015 24.2 2.5 19 57-75 229-247 (278)
144 2hzq_A Apolipoprotein D, APO-D 24.7 60 0.0021 21.0 2.9 18 71-88 137-154 (174)
145 3rhe_A NAD-dependent benzaldeh 24.7 46 0.0016 20.8 2.3 17 70-86 79-95 (148)
146 2r7a_A Bacterial heme binding 24.7 68 0.0023 21.7 3.3 22 60-81 110-131 (256)
147 2asy_A Protein YDHR precursor; 24.6 48 0.0016 22.2 2.4 29 53-85 73-101 (123)
148 2dum_A Hypothetical protein PH 24.5 75 0.0026 19.8 3.3 24 64-87 72-95 (170)
149 3hgm_A Universal stress protei 24.5 90 0.0031 18.6 3.6 25 62-86 62-86 (147)
150 2zjr_V 50S ribosomal protein L 24.4 41 0.0014 19.8 1.9 17 65-81 11-27 (67)
151 2kuf_A PKNB, serine/threonine- 24.4 41 0.0014 21.3 2.0 17 71-87 83-99 (139)
152 3gm5_A Lactoylglutathione lyas 24.4 30 0.001 21.3 1.4 16 71-86 114-129 (159)
153 3zw5_A Glyoxalase domain-conta 24.3 28 0.00096 21.4 1.2 18 70-87 99-116 (147)
154 2pju_A Propionate catabolism o 24.2 63 0.0022 22.9 3.2 33 54-86 110-157 (225)
155 3oa4_A Glyoxalase, BH1468 prot 24.2 39 0.0013 21.1 1.9 17 71-87 89-105 (161)
156 1r9c_A Glutathione transferase 24.1 37 0.0012 20.5 1.7 17 71-87 78-94 (139)
157 2qqz_A Glyoxalase family prote 24.1 40 0.0014 19.7 1.8 17 71-87 82-98 (126)
158 2kue_A PKNB, serine/threonine- 24.0 45 0.0016 21.2 2.2 16 71-86 17-32 (138)
159 2i7u_A Four-alpha-helix bundle 23.9 55 0.0019 19.2 2.3 22 60-81 40-61 (62)
160 3okq_A BUD site selection prot 23.8 74 0.0025 21.8 3.3 22 61-82 52-73 (141)
161 3lwa_A Secreted thiol-disulfid 23.8 81 0.0028 19.8 3.4 28 56-84 66-93 (183)
162 2d16_A Hypothetical protein PH 23.3 50 0.0017 23.2 2.4 19 69-87 144-162 (162)
163 3dax_A Cytochrome P450 7A1; ch 23.3 87 0.003 22.7 3.8 29 48-76 274-302 (491)
164 2kvu_A MKL/myocardin-like prot 23.2 54 0.0019 20.2 2.3 16 72-87 31-46 (75)
165 3k9v_A 1,25-dihydroxyvitamin D 23.1 67 0.0023 23.1 3.2 27 49-75 301-327 (482)
166 2cib_A Cytochrome P450 51; hem 23.1 49 0.0017 24.2 2.5 27 49-75 263-289 (455)
167 3j21_S 50S ribosomal protein L 23.1 89 0.0031 21.3 3.6 27 62-88 85-111 (155)
168 3ldz_A STAM-1, signal transduc 23.0 48 0.0016 21.7 2.2 25 57-86 115-139 (140)
169 3hm6_X Plexin-B1; structural g 22.8 22 0.00076 29.9 0.6 28 59-86 47-74 (644)
170 2f9i_A Acetyl-coenzyme A carbo 22.8 28 0.00096 26.2 1.1 31 57-87 13-43 (327)
171 1exn_A 5'-exonuclease, 5'-nucl 22.7 77 0.0026 23.5 3.5 24 63-86 94-120 (290)
172 2dpo_A L-gulonate 3-dehydrogen 22.6 92 0.0031 22.8 3.9 38 47-84 24-61 (319)
173 3ugc_A Tyrosine-protein kinase 22.6 84 0.0029 21.1 3.5 14 44-57 199-212 (295)
174 1tp9_A Peroxiredoxin, PRX D (t 22.4 83 0.0028 19.8 3.2 26 59-85 46-72 (162)
175 3fys_A Protein DEGV; fatty aci 22.3 52 0.0018 24.5 2.5 20 56-75 265-284 (315)
176 1zar_A RIO2 kinase; serine kin 22.3 74 0.0025 22.2 3.2 36 52-87 235-271 (282)
177 2gs3_A PHGPX, GPX-4, phospholi 22.3 57 0.002 20.9 2.5 29 57-86 57-85 (185)
178 1n97_A CYP175A1; electron tran 22.2 1E+02 0.0034 22.1 4.0 28 48-75 227-254 (389)
179 3ff5_A PEX14P, peroxisomal bio 22.2 55 0.0019 18.9 2.1 13 73-85 31-43 (54)
180 2kud_A PKNB, serine/threonine- 22.2 37 0.0013 21.6 1.5 16 71-86 18-33 (140)
181 3egl_A DEGV family protein; al 22.0 55 0.0019 23.8 2.5 19 57-75 213-231 (277)
182 1n2z_A Vitamin B12 transport p 22.0 82 0.0028 21.2 3.3 26 56-81 102-127 (245)
183 2c0s_A Conserved domain protei 22.0 75 0.0026 18.7 2.7 17 66-82 4-20 (64)
184 4b6x_A AVRRPS4, avirulence pro 21.8 96 0.0033 19.7 3.3 14 68-81 60-73 (90)
185 2pjs_A AGR_C_3564P, uncharacte 21.8 38 0.0013 19.5 1.4 17 71-87 74-90 (119)
186 3g2s_A C-terminal fragment of 21.8 61 0.0021 21.6 2.6 21 57-85 127-147 (149)
187 1qwd_A Outer membrane lipoprot 21.7 57 0.0019 21.7 2.4 18 70-87 150-167 (177)
188 3g9q_A Ferrichrome-binding pro 21.7 83 0.0028 21.5 3.3 22 60-81 116-137 (279)
189 4hde_A SCO1/SENC family lipopr 21.6 73 0.0025 20.5 2.9 21 61-85 48-68 (170)
190 2zkr_v 60S ribosomal protein L 21.5 60 0.002 21.6 2.4 17 65-81 14-30 (123)
191 1evh_A WH1 domain, protein (ME 21.5 87 0.003 19.9 3.2 22 57-79 90-111 (112)
192 3u5e_h 60S ribosomal protein L 21.5 60 0.0021 21.5 2.4 17 65-81 14-30 (120)
193 1zrj_A E1B-55KDA-associated pr 21.5 67 0.0023 18.1 2.3 15 72-86 15-29 (50)
194 3mfn_A Uncharacterized protein 21.4 62 0.0021 22.6 2.5 24 62-85 32-55 (157)
195 2l10_A Talin-1; helical bundle 21.4 51 0.0017 22.7 2.1 25 57-81 28-52 (158)
196 2q8p_A Iron-regulated surface 21.3 86 0.0029 21.1 3.3 23 59-81 107-129 (260)
197 3hdp_A Glyoxalase-I; glutathio 21.3 23 0.00078 21.0 0.3 16 71-86 87-102 (133)
198 3e6i_A CYPIIE1, P450-J, cytoch 21.2 57 0.002 23.5 2.5 28 49-76 285-312 (476)
199 3ju3_A Probable 2-oxoacid ferr 21.2 53 0.0018 20.6 2.0 17 70-86 26-42 (118)
200 2bzb_A Conserved domain protei 21.2 80 0.0027 18.4 2.7 17 66-82 4-20 (62)
201 4b28_A Metallopeptidase, famil 21.1 70 0.0024 24.9 3.1 26 60-85 71-96 (470)
202 3iz5_c 60S ribosomal protein L 21.0 62 0.0021 21.6 2.4 17 65-81 16-32 (124)
203 3s79_A Cytochrome P450 19A1; o 21.0 58 0.002 23.8 2.5 28 48-75 312-339 (503)
204 4ets_A Ferric uptake regulatio 21.0 72 0.0024 21.1 2.8 18 69-86 14-31 (162)
205 2p7o_A Glyoxalase family prote 21.0 35 0.0012 20.1 1.1 17 70-86 77-93 (133)
206 2q4a_A Clavaminate synthase-li 21.0 34 0.0012 24.7 1.2 32 54-85 145-176 (330)
207 5mdh_A Malate dehydrogenase; o 20.9 81 0.0028 23.4 3.3 18 64-81 315-332 (333)
208 2uwj_E Type III export protein 20.9 90 0.0031 19.0 2.9 24 59-82 14-37 (70)
209 3nyi_A FAT acid-binding protei 20.8 60 0.002 23.7 2.5 19 57-75 241-259 (297)
210 3vmx_A Voltage-gated hydrogen 20.6 1.3E+02 0.0044 17.1 3.6 23 62-84 24-46 (48)
211 2dmx_A DNAJ homolog subfamily 20.6 97 0.0033 18.3 3.1 21 61-81 45-65 (92)
212 1r9o_A Cytochrome P450 2C9; mo 20.5 60 0.0021 23.7 2.5 27 49-75 287-313 (477)
213 4dgf_A Sulfate transporter sul 20.5 45 0.0015 20.8 1.6 22 56-77 113-134 (135)
214 2yy0_A C-MYC-binding protein; 20.4 88 0.003 17.6 2.7 14 66-79 36-49 (53)
215 1efd_N Ferrichrome-binding per 20.3 98 0.0033 21.0 3.4 23 60-82 116-138 (266)
216 3rhb_A ATGRXC5, glutaredoxin-C 20.2 68 0.0023 19.0 2.3 23 56-86 24-46 (113)
217 3b6h_A Prostacyclin synthase; 20.2 83 0.0028 23.0 3.2 28 49-76 280-307 (498)
218 2ej7_A HCG3 gene; HCG3 protein 20.1 97 0.0033 17.8 3.0 21 61-81 45-65 (82)
219 3rfa_A Ribosomal RNA large sub 20.1 1E+02 0.0034 23.9 3.8 17 70-86 325-341 (404)
220 1zc3_B Exocyst complex protein 20.1 1E+02 0.0035 19.3 3.3 23 60-82 90-112 (113)
221 1h75_A Glutaredoxin-like prote 20.1 74 0.0025 17.3 2.3 23 56-86 6-28 (81)
222 4em8_A Ribose 5-phosphate isom 20.1 37 0.0012 23.3 1.1 24 61-87 14-37 (148)
223 3mq9_A Bone marrow stromal ant 20.1 78 0.0027 23.8 3.1 14 60-73 370-383 (471)
224 2qdq_A Talin-1; dimerisation d 20.1 1.2E+02 0.0041 17.4 3.2 15 67-81 19-33 (50)
225 3sk2_A EHPR; antibiotic resist 20.0 67 0.0023 19.1 2.3 17 70-86 84-103 (132)
No 1
>2cp9_A EF-TS, EF-TSMT, elongation factor TS, mitochondrial; UBA, structural genomics, human, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.2
Probab=88.11 E-value=0.061 Score=32.79 Aligned_cols=28 Identities=21% Similarity=0.379 Sum_probs=25.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcCC
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKGI 84 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG~ 84 (88)
.+.||.+|-+|-..+|++|-..||+||.
T Consensus 23 g~~dcKkAL~e~~GDi~~Ai~~Lr~kg~ 50 (64)
T 2cp9_A 23 SFVNCKKALETCGGDLKQAEIWLHKEAQ 50 (64)
T ss_dssp CHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHhH
Confidence 5679999999999999999999999874
No 2
>3mk7_C Cytochrome C oxidase, CBB3-type, subunit P; TM helices, oxidoreductase; HET: HEM HEC FC6; 3.20A {Pseudomonas stutzeri}
Probab=77.84 E-value=16 Score=26.74 Aligned_cols=47 Identities=11% Similarity=0.138 Sum_probs=30.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhccC-------------CchHHHHHHHHHHHHHHHHHH
Q 034652 33 GLLPIYFIVSLGCYGLLMVGIGLMYFP-------------TCPQEALLLQQDIKEAKEYLE 80 (88)
Q Consensus 33 ~~lP~~~lv~fG~Ysl~~vgy~v~tFn-------------DcpeA~~eL~~eI~eAk~dL~ 80 (88)
..+|-|.+..|-+=.++.++|-+. ++ |--....|.++|+++++++.+
T Consensus 52 nplp~ww~~~f~~~iv~~~~y~~~-yp~~~~~~g~~~~~~~~~~~~~~~~~ev~~~~~~~~ 111 (311)
T 3mk7_C 52 NPLPRWWFLLFIGTLVFGILYLVL-YPGLGNWKGVLPGYEGGWTQEKQWEREVAQADEKYG 111 (311)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHH-STTSTTCCCCCTTSTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHH-HhhccccccccccCCCCCChHHHHHHHHHHHHHhhh
Confidence 667777777777777777777654 22 233456777777777766654
No 3
>1aip_C EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus} SCOP: a.5.2.2 d.43.1.1
Probab=72.43 E-value=0.58 Score=33.87 Aligned_cols=27 Identities=15% Similarity=0.092 Sum_probs=25.2
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhcCC
Q 034652 58 FPTCPQEALLLQQDIKEAKEYLERKGI 84 (88)
Q Consensus 58 FnDcpeA~~eL~~eI~eAk~dL~~kG~ 84 (88)
+-||..|-.|-..+++.|.+.||+||.
T Consensus 18 mmdCKkAL~e~~GD~ekAie~LR~kG~ 44 (196)
T 1aip_C 18 MMDVKRALEDAGWDEEKAVQLLRERGA 44 (196)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHcCC
Confidence 569999999999999999999999986
No 4
>3lcn_C MRNA transport factor GFD1; nuclear mRNA export, metal-binding, nucleus, RNA-binding, ZI finger, membrane, nuclear pore complex; 2.00A {Saccharomyces cerevisiae}
Probab=67.76 E-value=7.2 Score=20.21 Aligned_cols=24 Identities=25% Similarity=0.451 Sum_probs=19.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhc
Q 034652 59 PTCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 59 nDcpeA~~eL~~eI~eAk~dL~~k 82 (88)
.|.+..-+-|.+.|+|-|+-|.++
T Consensus 2 ~~~~sKm~lLKKKIEEQr~i~~~~ 25 (29)
T 3lcn_C 2 QDTASKMKLLKKKIEEQREILQKT 25 (29)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHh
Confidence 367888899999999999988765
No 5
>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*
Probab=66.99 E-value=4.5 Score=27.31 Aligned_cols=25 Identities=16% Similarity=0.333 Sum_probs=21.0
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
++|.+ +|.++++.+.++|||+..++
T Consensus 115 iRfk~-~e~A~~f~~~~ee~~~~n~~ 139 (140)
T 4hat_B 115 IRFGS-KENADKFKEEFEKAQEINKK 139 (140)
T ss_dssp EEESS-HHHHHHHHHHHHHHHHHHHC
T ss_pred EEECC-HHHHHHHHHHHHHHHHHhcc
Confidence 45654 89999999999999998775
No 6
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=65.03 E-value=4.2 Score=24.12 Aligned_cols=31 Identities=13% Similarity=0.138 Sum_probs=20.5
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+++-+.||-. +-.++-+.||+.|+++|++++
T Consensus 6 ly~~~~C~~c--~~~~~~~~ak~~L~~~~i~~~ 36 (93)
T 1t1v_A 6 VYSTSVTGSR--EIKSQQSEVTRILDGKRIQYQ 36 (93)
T ss_dssp EEECSSCSCH--HHHHHHHHHHHHHHHTTCCCE
T ss_pred EEEcCCCCCc--hhhHHHHHHHHHHHHCCCceE
Confidence 3455666643 355666778888888887753
No 7
>3ph0_A ASCE; type III secretion system, chapero; 2.40A {Aeromonas hydrophila} PDB: 2q1k_A
Probab=58.82 E-value=12 Score=22.93 Aligned_cols=25 Identities=20% Similarity=0.114 Sum_probs=22.1
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhc
Q 034652 58 FPTCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 58 FnDcpeA~~eL~~eI~eAk~dL~~k 82 (88)
.||-|+.+.+++.+..+|..+.|++
T Consensus 10 ~~~~~~~~~~i~~~L~qAl~~vKr~ 34 (67)
T 3ph0_A 10 SGADPVFARELHAQLVQALGDVKRR 34 (67)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5777888999999999999999875
No 8
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=58.39 E-value=4 Score=25.15 Aligned_cols=25 Identities=16% Similarity=0.066 Sum_probs=18.0
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
|++-+.||-. +.||+.|+++|++++
T Consensus 8 vYs~~~Cp~C--------~~aK~~L~~~gi~y~ 32 (92)
T 2lqo_A 8 IYTTSWCGYC--------LRLKTALTANRIAYD 32 (92)
T ss_dssp EEECTTCSSH--------HHHHHHHHHTTCCCE
T ss_pred EEcCCCCHhH--------HHHHHHHHhcCCceE
Confidence 5667778865 467888888888764
No 9
>3u66_A SCIP/TSSL, putative type VI secretion protein; duble helical bundle, protein secretion, attached to inner M unknown function; 2.63A {Escherichia coli}
Probab=56.40 E-value=41 Score=23.30 Aligned_cols=51 Identities=18% Similarity=0.014 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 36 PIYFIVSLGCYGLLMVGIGLMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 36 P~~~lv~fG~Ysl~~vgy~v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
|+-.+..=+...+..+--+- +..|.++=++.+.++|++.++.+++.|++-+
T Consensus 8 ~i~~l~~~~l~lv~~Lr~~~-~~~d~~~lr~~~~~~i~~~e~~~~~~g~~~~ 58 (183)
T 3u66_A 8 RAEQIFYPGWLMVSQLRSGQ-PVEDGKALYRRACQLVKQAREELAEAGFSQK 58 (183)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-CCCCHHHHHHHHHHHHHHHHHHHHHTTCCHH
T ss_pred CHHHHHHHHHHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
Confidence 55555555666666666554 7788888899999999999999999998643
No 10
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=55.49 E-value=6.4 Score=24.76 Aligned_cols=18 Identities=28% Similarity=0.468 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
+++++|.+.|+++|+.++
T Consensus 76 ~~~~~ai~~L~~~~v~vE 93 (106)
T 3dhx_A 76 QDTQAAIAWLQEHHVKVE 93 (106)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 368999999999999874
No 11
>1gng_X Frattide, glycogen synthase kinase-3 beta; transferase, protein kinase, GSK3/frattide complex, phosphorylated, active; HET: PTR; 2.6A {Homo sapiens}
Probab=53.55 E-value=14 Score=20.33 Aligned_cols=22 Identities=27% Similarity=0.222 Sum_probs=14.1
Q ss_pred HHHHHHHHH---HHHHHHHHHhcCC
Q 034652 63 QEALLLQQD---IKEAKEYLERKGI 84 (88)
Q Consensus 63 eA~~eL~~e---I~eAk~dL~~kG~ 84 (88)
+--+||..+ |+||-+-|+.+|+
T Consensus 14 ~lLQ~Llr~G~LIkEAVrRlq~~~l 38 (39)
T 1gng_X 14 RLLQQLVLSGNLIKEAVRRLHSRRL 38 (39)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHC---
T ss_pred HHHHHHHHhCcHHHHHHHHHHHccC
Confidence 334555555 9999999999986
No 12
>2lqu_A Decorin-binding protein A; GAG-binding protein, helical bundle protein, LYME disease, B adhesin, cell adhesion; NMR {Borrelia burgdorferi}
Probab=53.17 E-value=17 Score=25.78 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 62 PQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+.-+++...||..+|++=..+||.+|
T Consensus 13 ESSakdI~deI~kikkeA~~~GVnf~ 38 (168)
T 2lqu_A 13 ERSAKDITDEIDAIKKDAALKGVNFD 38 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HhhHHHHHHHHHHHHHHHHHcCCCHH
Confidence 34578889999999999999999987
No 13
>2o6n_A RH4B designed peptide; right-handed, tetramer, de novo protein; HET: CGU; 1.10A {Synthetic} SCOP: k.17.1.1 PDB: 1tgg_A*
Probab=51.86 E-value=17 Score=19.23 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 034652 62 PQEALLLQQDIKEAKEYL 79 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL 79 (88)
..|-+|..+||+.||.+.
T Consensus 16 kkakeeileeikkakqei 33 (35)
T 2o6n_A 16 KKAKEEILEEIKKAKQEI 33 (35)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 356778888898888764
No 14
>1jb0_J Photosystem 1 reaction centre subunit IX; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: f.23.18.1 PDB: 3pcq_J*
Probab=50.64 E-value=8.7 Score=21.41 Aligned_cols=22 Identities=27% Similarity=0.620 Sum_probs=19.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHH
Q 034652 1 MKHVVKILTLLVAITALWFGLL 22 (88)
Q Consensus 1 M~r~~~~l~~~~~l~~~w~~l~ 22 (88)
|+..+|.++.+=++..+|+...
T Consensus 1 m~~f~kyLstAPVla~~w~~~t 22 (41)
T 1jb0_J 1 MKHFLTYLSTAPVLAAIWMTIT 22 (41)
T ss_dssp CHHHHHHTTBHHHHHHHHHHHH
T ss_pred CchHHHHHhhhhHHHHHHHHHH
Confidence 8888999999999999998875
No 15
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=49.55 E-value=9.7 Score=25.05 Aligned_cols=31 Identities=10% Similarity=0.216 Sum_probs=23.7
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
|+|-+.||-. +..++-..||+.|++||++++
T Consensus 4 vYtt~~c~~c--~~kk~c~~aK~lL~~kgV~fe 34 (121)
T 1u6t_A 4 VYIASSSGST--AIKKKQQDVLGFLEANKIGFE 34 (121)
T ss_dssp EEECTTCSCH--HHHHHHHHHHHHHHHTTCCEE
T ss_pred EEecCCCCCc--cchHHHHHHHHHHHHCCCceE
Confidence 4566677743 456777899999999999875
No 16
>1xb2_B EF-TS, elongation factor TS, mitochondrial, EF-TSMT; protein-protein complex, translation; HET: MSE; 2.20A {Bos taurus} SCOP: a.5.2.2 d.43.1.1 d.43.1.1
Probab=49.29 E-value=2.8 Score=31.68 Aligned_cols=28 Identities=25% Similarity=0.477 Sum_probs=25.4
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHh----cCC
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLER----KGI 84 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~----kG~ 84 (88)
.+-||.+|-.|=..+++.|.+.||+ ||.
T Consensus 18 gmmdCKKAL~e~~GD~ekAie~LR~~a~kkG~ 49 (291)
T 1xb2_B 18 SFINCKKALETCGGDLKQAESWLHKQAQKEGW 49 (291)
T ss_dssp CHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHHHHhccH
Confidence 3569999999999999999999999 885
No 17
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=48.76 E-value=11 Score=21.51 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=13.7
Q ss_pred HHHHHHHHHHhcCCcc
Q 034652 71 DIKEAKEYLERKGIDV 86 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~ 86 (88)
..+||++.|++.|+++
T Consensus 17 ~~~~A~~~L~~~Gl~~ 32 (71)
T 3ouv_A 17 TVDVAQKNMNVYGFTK 32 (71)
T ss_dssp BHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHCCCeE
Confidence 4688999999999976
No 18
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=48.48 E-value=15 Score=24.55 Aligned_cols=27 Identities=26% Similarity=0.489 Sum_probs=21.4
Q ss_pred HHhhhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 52 GIGLMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 52 gy~v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
.|+. .|.+.|+ |.++=+.|+++|+.|-
T Consensus 113 ~W~~-~f~~~p~--------i~~~y~~Lk~~G~~Fp 139 (148)
T 1mhq_A 113 SWTV-WFPEDIK--------IRDAYQMLKKQGIIKQ 139 (148)
T ss_dssp HHHH-HCTTCHH--------HHHHHHHHHHTTSSCS
T ss_pred HHHH-HcCCCch--------HHHHHHHHHHcCCCCC
Confidence 3444 3788774 8999999999999875
No 19
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.33 E-value=10 Score=23.46 Aligned_cols=31 Identities=13% Similarity=0.269 Sum_probs=19.3
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
|++-+.||-.. -.+.-++||+.|+++|++++
T Consensus 12 vy~~~~C~~C~--~~~~~~~ak~~L~~~gi~y~ 42 (111)
T 2ct6_A 12 VFIASSSGFVA--IKKKQQDVVRFLEANKIEFE 42 (111)
T ss_dssp EEECSSCSCHH--HHHHHHHHHHHHHHTTCCEE
T ss_pred EEEcCCCCCcc--cchhHHHHHHHHHHcCCCEE
Confidence 45667777543 23344567778888887653
No 20
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=47.87 E-value=13 Score=20.84 Aligned_cols=24 Identities=25% Similarity=0.392 Sum_probs=16.0
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
+++.+.||... .||..|+++|+++
T Consensus 8 ly~~~~Cp~C~--------~~~~~L~~~~i~~ 31 (89)
T 3msz_A 8 IYTRNGCPYCV--------WAKQWFEENNIAF 31 (89)
T ss_dssp EEECTTCHHHH--------HHHHHHHHTTCCC
T ss_pred EEEcCCChhHH--------HHHHHHHHcCCCc
Confidence 45667888764 4677777777654
No 21
>3m1i_B RAN-specific GTPase-activating protein 1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae}
Probab=47.53 E-value=16 Score=26.08 Aligned_cols=25 Identities=16% Similarity=0.333 Sum_probs=21.1
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
++|.+ +|.++++.+.|++||+..++
T Consensus 166 IRFk~-~E~A~eF~~~~eeaq~~nkk 190 (191)
T 3m1i_B 166 IRFGS-KENADKFKEEFEKAQEINKK 190 (191)
T ss_dssp EECSS-HHHHHHHHHHHHHHHHHHHT
T ss_pred EEECC-HHHHHHHHHHHHHHHHHhhc
Confidence 45664 88999999999999998875
No 22
>2kxe_A DNA polymerase II small subunit; D-family, archara, helical BU transferase; HET: DNA; NMR {Pyrococcus horikoshii}
Probab=47.27 E-value=8.5 Score=23.88 Aligned_cols=15 Identities=33% Similarity=0.565 Sum_probs=12.4
Q ss_pred HHHHHHHHhcCCccC
Q 034652 73 KEAKEYLERKGIDVS 87 (88)
Q Consensus 73 ~eAk~dL~~kG~~~d 87 (88)
.-|+++|++||+.++
T Consensus 55 ~lA~EFL~~kG~~~~ 69 (75)
T 2kxe_A 55 EIANEFLKSIGAEVE 69 (75)
T ss_dssp HHHHHHHHHHTCCCC
T ss_pred HHHHHHHHhcCceec
Confidence 358899999999875
No 23
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=47.03 E-value=12 Score=24.58 Aligned_cols=25 Identities=28% Similarity=0.337 Sum_probs=20.6
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
+.|.+ +|.++++.+.|+|||+.+.+
T Consensus 99 irfks-~e~a~~f~~~~ee~k~~~~~ 123 (130)
T 1xke_A 99 AKFKT-PELAEEFKQKFEECQRLLLD 123 (130)
T ss_dssp EECSS-HHHHHHHHHHHHHHHHHTTT
T ss_pred EEECC-HHHHHHHHHHHHHHHHHhhc
Confidence 34553 88999999999999998865
No 24
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=46.60 E-value=11 Score=23.43 Aligned_cols=17 Identities=12% Similarity=0.237 Sum_probs=14.8
Q ss_pred HHHHHHHHHHhcCCccC
Q 034652 71 DIKEAKEYLERKGIDVS 87 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~d 87 (88)
++++|.+.|+++|+.++
T Consensus 77 ~~~~ai~~L~~~~v~vE 93 (98)
T 3ced_A 77 DFGKFEKELIERQVKME 93 (98)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCEEE
Confidence 68899999999998764
No 25
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=46.15 E-value=11 Score=23.18 Aligned_cols=18 Identities=39% Similarity=0.530 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
+++++|.+.|+++|+.++
T Consensus 78 ~~~~~ai~~L~~~~v~vE 95 (101)
T 2qrr_A 78 QDDSAAIEYLRENNVKVE 95 (101)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHcCCEEE
Confidence 368899999999998764
No 26
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=45.75 E-value=13 Score=21.50 Aligned_cols=24 Identities=21% Similarity=0.248 Sum_probs=15.9
Q ss_pred hhccC----CchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 55 LMYFP----TCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 55 v~tFn----DcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
+++.+ .||.. ..||+.|+++|+++
T Consensus 4 iY~~~~~~~~Cp~C--------~~ak~~L~~~gi~y 31 (87)
T 1aba_A 4 VYGYDSNIHKCGPC--------DNAKRLLTVKKQPF 31 (87)
T ss_dssp EEECCTTTSCCHHH--------HHHHHHHHHTTCCE
T ss_pred EEEeCCCCCcCccH--------HHHHHHHHHcCCCE
Confidence 34556 77755 46777777777765
No 27
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=45.24 E-value=8 Score=24.93 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=26.2
Q ss_pred HHHhhhccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 51 VGIGLMYFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 51 vgy~v~tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
||-|++.=.|.+||.+.|.+.++.+++.+++
T Consensus 76 lG~g~~vE~~~~eA~~~l~~r~~~l~~~~~~ 106 (133)
T 1fxk_C 76 VGAGVAIKKNFEDAMESIKSQKNELESTLQK 106 (133)
T ss_dssp EETTEEEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeeHHHHHHHHHHHHHHHHHHHHH
Confidence 6888999999999999999888888776653
No 28
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=45.02 E-value=12 Score=23.00 Aligned_cols=18 Identities=28% Similarity=0.311 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
+++++|.+.|+++|+.++
T Consensus 78 ~~~~~ai~~L~~~~v~vE 95 (100)
T 2qsw_A 78 QNILAAIEGLRKLRVETE 95 (100)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHcCCEEE
Confidence 368899999999998764
No 29
>1j8b_A YBAB; hypothetical protein, structural genomics, structure function project, S2F, unknown function; HET: MSE; 1.75A {Haemophilus influenzae RD} SCOP: d.222.1.1 PDB: 1pug_A
Probab=44.50 E-value=9.6 Score=24.75 Aligned_cols=29 Identities=10% Similarity=0.150 Sum_probs=24.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcCCc
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG~~ 85 (88)
.+++-=.-+++.|+++++++++|.++-++
T Consensus 9 nm~~mmkqaq~mQ~~m~~~QeeL~~~~v~ 37 (112)
T 1j8b_A 9 GLGGLMKQAQQMQEKMQKMQEEIAQLEVT 37 (112)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHTTSEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccEEE
Confidence 78888889999999999999999987543
No 30
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=43.94 E-value=21 Score=24.60 Aligned_cols=37 Identities=14% Similarity=0.381 Sum_probs=31.3
Q ss_pred HHHhhhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 51 VGIGLMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 51 vgy~v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+-+|.....+-|.+..-+..+++.-.++++++|+..+
T Consensus 211 iDFG~a~~~~~~~~~~~l~rd~~~~~~~f~~~g~~~~ 247 (258)
T 1zth_A 211 IDMGQAVTLRHPMAESYLERDVRNIIRFFSKYGVKAD 247 (258)
T ss_dssp CCCTTCEETTSTTHHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred EECcccccCCCccHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3456777778899988999999999999999999864
No 31
>1xg2_B Pectinesterase inhibitor; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Actinidia chinensis}
Probab=43.93 E-value=12 Score=23.73 Aligned_cols=27 Identities=19% Similarity=0.362 Sum_probs=23.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcC
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKG 83 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG 83 (88)
.++||-|-|.+-..++++|.+.|+++.
T Consensus 71 al~dC~e~y~~a~~~L~~a~~~l~~~~ 97 (153)
T 1xg2_B 71 RYETCSENYADAIDSLGQAKQFLTSGD 97 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999998753
No 32
>1k5d_B RAN-specific GTPase-activating protein; ranbp1, rangap, GAP, signal transduction, nuclear transport, GTP hydrolysis, ground state; HET: GNP; 2.70A {Homo sapiens} SCOP: b.55.1.3 PDB: 1k5g_B*
Probab=43.57 E-value=19 Score=25.65 Aligned_cols=26 Identities=15% Similarity=0.367 Sum_probs=21.3
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~k 82 (88)
++|.+ +|.++++.+.|++||+.++++
T Consensus 140 iRfks-~e~A~~f~~~~ee~k~~~~~~ 165 (201)
T 1k5d_B 140 IRFLN-AENAQKFKTKFEECRKEIEER 165 (201)
T ss_dssp EECSS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECC-HHHHHHHHHHHHHHHHHHHhh
Confidence 34544 789999999999999998865
No 33
>2y7c_A Type-1 restriction enzyme ecoki specificity prote; transferase; 18.00A {Escherichia coli} PDB: 2y7h_A*
Probab=43.22 E-value=24 Score=25.72 Aligned_cols=21 Identities=24% Similarity=0.183 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q 034652 63 QEALLLQQDIKEAKEYLERKG 83 (88)
Q Consensus 63 eA~~eL~~eI~eAk~dL~~kG 83 (88)
|-|.+|.++|++.|+.+.+++
T Consensus 438 ~~a~~LL~ri~~er~~~~~~~ 458 (464)
T 2y7c_A 438 NSAAALLEKIKAERAASGGKK 458 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHHhhccccc
Confidence 559999999999999886654
No 34
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=42.87 E-value=12 Score=23.05 Aligned_cols=20 Identities=40% Similarity=0.579 Sum_probs=16.5
Q ss_pred hccCCchHHHHHHHHHHHHHH
Q 034652 56 MYFPTCPQEALLLQQDIKEAK 76 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk 76 (88)
+||..|| +.+.|+++|++|=
T Consensus 50 lt~~~cp-~~~~l~~~i~~al 69 (103)
T 1uwd_A 50 MTTPMCP-LAGMILSDAEEAI 69 (103)
T ss_dssp CSSSCCS-SHHHHHHHHHHHH
T ss_pred ECCCCCc-HHHHHHHHHHHHH
Confidence 5788999 4888999998874
No 35
>1x91_A Invertase/pectin methylesterase inhibitor family protein; four-helix bundle, alpha hairpin, disulfide bridge, domain- swapping, linker; 1.50A {Arabidopsis thaliana} SCOP: a.29.6.1 PDB: 1x8z_A 1x90_A
Probab=42.67 E-value=13 Score=23.73 Aligned_cols=27 Identities=22% Similarity=0.244 Sum_probs=23.8
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcC
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKG 83 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG 83 (88)
.++||-|-|.+-..++++|.+.|+++.
T Consensus 71 al~dC~e~y~~a~~~L~~a~~~l~~~~ 97 (153)
T 1x91_A 71 AYRSCVDEYESAIGNLEEAFEHLASGD 97 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 478999999999999999999998753
No 36
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=41.79 E-value=15 Score=20.95 Aligned_cols=24 Identities=33% Similarity=0.744 Sum_probs=14.7
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
+++.+.||... .||..|+++|+++
T Consensus 16 ly~~~~Cp~C~--------~~~~~L~~~gi~~ 39 (92)
T 3ic4_A 16 MYGLSTCPHCK--------RTLEFLKREGVDF 39 (92)
T ss_dssp EEECTTCHHHH--------HHHHHHHHHTCCC
T ss_pred EEECCCChHHH--------HHHHHHHHcCCCc
Confidence 45667788653 3566666666654
No 37
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=41.59 E-value=21 Score=23.38 Aligned_cols=26 Identities=15% Similarity=0.161 Sum_probs=19.2
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~k 82 (88)
++|.+ ||++.+-.+.+++|.++|+..
T Consensus 88 LnF~s-~~eA~~F~~~~~~~~~~l~~~ 113 (120)
T 1ddw_A 88 LGFSS-EHHLSKFAEKFQEFKEAARLA 113 (120)
T ss_dssp EECSS-HHHHHHHHHHHHHHHHHHC--
T ss_pred eccCC-HHHHHHHHHHHHHHHHHHHHH
Confidence 36777 666677789999999999754
No 38
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=41.58 E-value=31 Score=17.27 Aligned_cols=16 Identities=25% Similarity=0.320 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 034652 65 ALLLQQDIKEAKEYLE 80 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~ 80 (88)
+.||-+|.+.-++.||
T Consensus 3 adelykeledlqerlr 18 (27)
T 3twe_A 3 ADELYKELEDLQERLR 18 (27)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555444444444
No 39
>2cj4_A Invertase inhibitor; protein binding, four-helix bundle, helical hairpin; 1.63A {Nicotiana tabacum} SCOP: a.29.6.1 PDB: 2cj5_A 2cj6_A 2cj7_A 2cj8_A 1rj1_A 1rj4_A* 2xqr_B*
Probab=40.78 E-value=8.7 Score=24.58 Aligned_cols=26 Identities=19% Similarity=0.261 Sum_probs=22.7
Q ss_pred ccCCchHHHHHHH-HHHHHHHHHHHhc
Q 034652 57 YFPTCPQEALLLQ-QDIKEAKEYLERK 82 (88)
Q Consensus 57 tFnDcpeA~~eL~-~eI~eAk~dL~~k 82 (88)
.++||-|.|.+-. .++++|.++++++
T Consensus 72 al~dC~e~y~~a~~~~L~~a~~~l~~~ 98 (150)
T 2cj4_A 72 PLKNCAFSYKVILTASLPEAIEALTKG 98 (150)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4789999999999 6999999999874
No 40
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=40.54 E-value=16 Score=22.96 Aligned_cols=21 Identities=29% Similarity=0.316 Sum_probs=16.1
Q ss_pred hhccCCchHHHHHHHHHHHHHH
Q 034652 55 LMYFPTCPQEALLLQQDIKEAK 76 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk 76 (88)
.+|+..|| +...+.++|++|=
T Consensus 51 tlt~p~cp-~~~~i~~~i~~al 71 (108)
T 3lno_A 51 TMTSIGCP-MAGQIVSDVKKVL 71 (108)
T ss_dssp CCSCTTCT-THHHHHHHHHHHH
T ss_pred EECCCCCc-HHHHHHHHHHHHH
Confidence 35788999 4578888888774
No 41
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=40.16 E-value=18 Score=23.01 Aligned_cols=25 Identities=24% Similarity=0.677 Sum_probs=18.9
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+++-+.||- -+.||+.|+++|++++
T Consensus 8 iY~~p~C~~--------c~ka~~~L~~~gi~~~ 32 (120)
T 3gkx_A 8 FLQYPACST--------CQKAKKWLIENNIEYT 32 (120)
T ss_dssp EEECTTCHH--------HHHHHHHHHHTTCCCE
T ss_pred EEECCCChH--------HHHHHHHHHHcCCceE
Confidence 456678885 4678999999998764
No 42
>3iu6_A Protein polybromo-1; PB1, polybromo 1 isoform 1, BAF180, polybromo0ID, PBRM1, BRG associated factor 180, structural genomics, SGC; HET: OCS; 1.79A {Homo sapiens}
Probab=39.57 E-value=33 Score=23.48 Aligned_cols=26 Identities=23% Similarity=0.222 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccCC
Q 034652 63 QEALLLQQDIKEAKEYLERKGIDVSE 88 (88)
Q Consensus 63 eA~~eL~~eI~eAk~dL~~kG~~~d~ 88 (88)
+.+.+||+...++++.|.+.|=.+.|
T Consensus 93 eDAv~Lq~~f~~~r~eL~~~g~~~~s 118 (147)
T 3iu6_A 93 EDAVELQQFFIKIRDELCKNGEILLS 118 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeecC
Confidence 78999999999999999999876543
No 43
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=39.49 E-value=19 Score=24.56 Aligned_cols=29 Identities=21% Similarity=0.342 Sum_probs=24.0
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcCCc
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG~~ 85 (88)
.+++-=.-+++.|+++++++++|.++-++
T Consensus 42 nm~~mmkQAQkmQ~km~k~QeeL~~~eve 70 (143)
T 1ybx_A 42 NINNLVKQAQKMQRDMERVQEELKEKTVE 70 (143)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCEEE
Confidence 56777788999999999999999987543
No 44
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=39.45 E-value=11 Score=25.00 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=26.3
Q ss_pred HHHhhhccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 51 VGIGLMYFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 51 vgy~v~tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
||-|++.=.|.+||.+.|.+.|+.+++.+++
T Consensus 86 lG~g~~vE~~~~eA~~~l~~ri~~l~~~l~~ 116 (151)
T 2zdi_C 86 VGSGYAVERSIDEAISFLEKRLKEYDEAIKK 116 (151)
T ss_dssp EETTEEEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCeEEEecHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999888888877654
No 45
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=39.24 E-value=19 Score=22.85 Aligned_cols=25 Identities=28% Similarity=0.527 Sum_probs=18.7
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+++-+.||. -+.||+.|+++|++++
T Consensus 8 iY~~p~C~~--------c~ka~~~L~~~gi~~~ 32 (119)
T 3f0i_A 8 IYHNPKCSK--------SRETLALLENQGIAPQ 32 (119)
T ss_dssp EECCTTCHH--------HHHHHHHHHHTTCCCE
T ss_pred EEECCCChH--------HHHHHHHHHHcCCceE
Confidence 456677874 4678899999998764
No 46
>3avx_A Elongation factor TS, elongation factor TU, linke replicase; RNA polymerase, translation, transferase-RNA complex; HET: GH3; 2.41A {Escherichia coli O157} PDB: 3agq_A 3agp_A* 3avu_A 3avv_A 3avt_A* 3avw_A* 3avy_A* 3mmp_A* 3mmp_G* 1efu_B
Probab=39.18 E-value=3.4 Score=37.13 Aligned_cols=29 Identities=21% Similarity=0.213 Sum_probs=26.2
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcCCc
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG~~ 85 (88)
-+-||.+|-+|=..+++.|.+.||+||..
T Consensus 19 gmmdCKKAL~e~~GD~ekAie~LRkkG~a 47 (1289)
T 3avx_A 19 GMMDCKKALTEANGDIELAIENMRKSGAI 47 (1289)
T ss_dssp CTTTTTTTTTTTTTCHHHHHHHHHTTHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHHhCcc
Confidence 35799999999999999999999999963
No 47
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=38.82 E-value=22 Score=21.20 Aligned_cols=17 Identities=12% Similarity=0.323 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHhcCCcc
Q 034652 70 QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~ 86 (88)
++++++.+.|+++|+++
T Consensus 79 ~d~~~~~~~l~~~G~~~ 95 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPF 95 (135)
T ss_dssp HHHHHHHHHHHHTTCCE
T ss_pred HhHHHHHHHHHHcCCce
Confidence 58899999999999976
No 48
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=38.76 E-value=29 Score=19.93 Aligned_cols=18 Identities=17% Similarity=0.383 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
++++++.+.|+++|+++.
T Consensus 72 ~d~~~~~~~l~~~G~~~~ 89 (113)
T 1xqa_A 72 EQVDKINQRLKEDGFLVE 89 (113)
T ss_dssp HHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 468888888999998764
No 49
>3r3p_A MobIle intron protein; homing endonuclease, hydrolase; 2.20A {Bacillus phage 0305phi8-36}
Probab=38.72 E-value=14 Score=23.35 Aligned_cols=37 Identities=14% Similarity=0.054 Sum_probs=24.3
Q ss_pred HHHHHHHhhhccCCch-HHHHHHHHHHHHHHHHHHhcC
Q 034652 47 GLLMVGIGLMYFPTCP-QEALLLQQDIKEAKEYLERKG 83 (88)
Q Consensus 47 sl~~vgy~v~tFnDcp-eA~~eL~~eI~eAk~dL~~kG 83 (88)
.|-..||.|++|-+|. ..-+...++|.++=..-.+.|
T Consensus 67 ~L~~~Gw~Vlr~~~~~v~~~~~v~~~I~~~l~~~~~~~ 104 (105)
T 3r3p_A 67 ELHSKGYRVLTIEDDELNDIDKVKQQIQKFWVTHISNG 104 (105)
T ss_dssp HHHHTTCEEEEEEGGGGGGHHHHHHHHHHHHHHHHC--
T ss_pred HHHHCCCEEEEEeHHHhCCHHHHHHHHHHHHHHhhccC
Confidence 3567799999998887 234456677777666555555
No 50
>3fau_A NEDD4-binding protein 2; SMR, small-MUTS related domain, nicking endonuclease, alternative splicing, ATP-binding, coiled coil, cytoplasm, hydrolase; 1.90A {Homo sapiens} SCOP: d.68.8.1
Probab=38.27 E-value=42 Score=19.73 Aligned_cols=25 Identities=12% Similarity=0.139 Sum_probs=19.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHh-cCC
Q 034652 60 TCPQEALLLQQDIKEAKEYLER-KGI 84 (88)
Q Consensus 60 DcpeA~~eL~~eI~eAk~dL~~-kG~ 84 (88)
+.+||..+|.+-|++|.+.+++ .|.
T Consensus 9 ~v~eA~~~l~~~l~~~~~~~~~~~g~ 34 (82)
T 3fau_A 9 HVDEALEHLMRVLEKKTEEFKQNGGK 34 (82)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 4689999999999999876654 454
No 51
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=37.27 E-value=32 Score=23.99 Aligned_cols=24 Identities=17% Similarity=0.141 Sum_probs=18.3
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
+|.+ ||++..-.+.++||+++|+.
T Consensus 94 nF~S-e~eA~~F~~~~~~ale~l~~ 117 (168)
T 1i2h_A 94 GFSS-EHHLSKFAEKFQEFKEAARL 117 (168)
T ss_dssp EESS-HHHHHHHHHHHHHHHHHHHH
T ss_pred ccCC-HHHHHHHHHHHHHHHHHHHH
Confidence 6777 55666668889999988874
No 52
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=37.18 E-value=27 Score=24.03 Aligned_cols=23 Identities=22% Similarity=0.380 Sum_probs=19.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 61 CPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 61 cpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
.|+.|.++.+++++ .|+++|+.|
T Consensus 90 ~P~~A~~iL~~le~---~L~~~g~eV 112 (143)
T 2hl0_A 90 KPSVAMDILNRVYQ---GLKERGFNV 112 (143)
T ss_dssp CHHHHHHHHHHHHH---HHHHTTCEE
T ss_pred ChHHHHHHHHHHHH---HHHhCCCeE
Confidence 79999999888876 688898765
No 53
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=36.88 E-value=21 Score=22.79 Aligned_cols=25 Identities=24% Similarity=0.514 Sum_probs=18.9
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+++-+.||- -+.||+.|+++|++++
T Consensus 9 iY~~p~C~~--------c~ka~~~L~~~gi~~~ 33 (121)
T 3rdw_A 9 IYHNPRCSK--------SRETLALVEQQGITPQ 33 (121)
T ss_dssp EECCTTCHH--------HHHHHHHHHTTTCCCE
T ss_pred EEECCCCHH--------HHHHHHHHHHcCCCcE
Confidence 456678884 4678999999998764
No 54
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=36.86 E-value=33 Score=22.52 Aligned_cols=22 Identities=14% Similarity=0.279 Sum_probs=14.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHH
Q 034652 59 PTCPQEALLLQQDIKEAKEYLE 80 (88)
Q Consensus 59 nDcpeA~~eL~~eI~eAk~dL~ 80 (88)
+|-|+..+.|++|+++.++.++
T Consensus 28 ~~l~~~v~~l~~e~k~l~ke~~ 49 (171)
T 2zvf_A 28 AKLPKTVERFFEEWKDQRKEIE 49 (171)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3666777777777766666554
No 55
>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus}
Probab=36.65 E-value=31 Score=21.74 Aligned_cols=21 Identities=19% Similarity=0.328 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhc
Q 034652 37 IYFIVSLGCYGLLMVGIGLMY 57 (88)
Q Consensus 37 ~~~lv~fG~Ysl~~vgy~v~t 57 (88)
+...+.+|.|-+..+--+|..
T Consensus 74 Fi~fi~i~~fi~lNLfiaVi~ 94 (112)
T 4f4l_A 74 FIPFIMLTTFTVLNLFIGIIV 94 (112)
T ss_dssp HHHHHHHHHHHHHHHHTTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345678899999999888874
No 56
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=36.64 E-value=21 Score=19.58 Aligned_cols=24 Identities=33% Similarity=0.508 Sum_probs=14.3
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
+++.+.||... .||..|+++|+++
T Consensus 5 ~y~~~~C~~C~--------~~~~~l~~~~i~~ 28 (82)
T 1fov_A 5 IYTKETCPYCH--------RAKALLSSKGVSF 28 (82)
T ss_dssp EEECSSCHHHH--------HHHHHHHHHTCCC
T ss_pred EEECCCChhHH--------HHHHHHHHCCCCc
Confidence 34566777553 4556666666654
No 57
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=36.47 E-value=18 Score=23.07 Aligned_cols=25 Identities=24% Similarity=0.478 Sum_probs=18.3
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+++-+.||. -+.||+.|+++|++++
T Consensus 7 iY~~~~C~~--------c~ka~~~L~~~gi~~~ 31 (120)
T 3fz4_A 7 FYEYPKCST--------CRRAKAELDDLAWDYD 31 (120)
T ss_dssp EEECSSCHH--------HHHHHHHHHHHTCCEE
T ss_pred EEeCCCChH--------HHHHHHHHHHcCCceE
Confidence 456677874 4678899999998763
No 58
>3uh9_A Metallothiol transferase FOSB 2; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: MSE; 1.60A {Bacillus anthracis}
Probab=36.39 E-value=28 Score=21.06 Aligned_cols=18 Identities=17% Similarity=0.364 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
++++++.+.|+++|+++.
T Consensus 74 ~d~~~~~~~l~~~G~~~~ 91 (145)
T 3uh9_A 74 EALDHLKEVLIQNDVNIL 91 (145)
T ss_dssp HHHHHHHHHHHHTTCCBC
T ss_pred HHHHHHHHHHHHCCCeEe
Confidence 588999999999999874
No 59
>2d9e_A Peregrin; four-helix bundle, transcription activator, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.28 E-value=44 Score=21.28 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=25.9
Q ss_pred HhhhccCCc----hHHHHHHHH----HHHHHHHHHHhcCCccC
Q 034652 53 IGLMYFPTC----PQEALLLQQ----DIKEAKEYLERKGIDVS 87 (88)
Q Consensus 53 y~v~tFnDc----peA~~eL~~----eI~eAk~dL~~kG~~~d 87 (88)
-+-.+||.. -.+|.+|++ .++++|+.+.+-|++-+
T Consensus 77 ~Na~~yN~~~s~~~~~A~~L~~~~~~~l~~~~~~~~~~~~~~~ 119 (121)
T 2d9e_A 77 SNCLKYNAKDTIFYRAAVRLREQGGAVLRQARRQAEKMGSGPS 119 (121)
T ss_dssp HHHHHHSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTSBTTB
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 445567753 356777774 68999999999999865
No 60
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=36.17 E-value=23 Score=23.30 Aligned_cols=25 Identities=12% Similarity=0.264 Sum_probs=18.6
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+++-++||- -+.||+.|+++|++++
T Consensus 6 iY~~p~C~~--------crkak~~L~~~gi~~~ 30 (141)
T 1s3c_A 6 IYHNPASGT--------SRNTLEMIRNSGTEPT 30 (141)
T ss_dssp EECCTTCHH--------HHHHHHHHHHTTCCCE
T ss_pred EEECCCChH--------HHHHHHHHHHcCCCEE
Confidence 456678874 4578899999998763
No 61
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=35.87 E-value=29 Score=17.27 Aligned_cols=16 Identities=19% Similarity=0.295 Sum_probs=13.3
Q ss_pred hHHHHHHHHHHHHHHH
Q 034652 62 PQEALLLQQDIKEAKE 77 (88)
Q Consensus 62 peA~~eL~~eI~eAk~ 77 (88)
+|+|+|..+...||..
T Consensus 2 eeeyqemlenlreaev 17 (26)
T 2dpr_A 2 EEEYQEMLENLREAEV 17 (26)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHH
Confidence 5889999999888864
No 62
>1s5l_U Photosystem II 12 kDa extrinsic protein; photosynthesis, oxygen-evolving, tetra- manganese, membrane; HET: CL1 PHO HEM PL9 LMT BCR; 3.50A {Thermosynechococcus elongatus}
Probab=35.12 E-value=8 Score=26.40 Aligned_cols=22 Identities=18% Similarity=0.007 Sum_probs=0.0
Q ss_pred ChHHHHHHHHHHH-HHHHHHHHH
Q 034652 1 MKHVVKILTLLVA-ITALWFGLL 22 (88)
Q Consensus 1 M~r~~~~l~~~~~-l~~~w~~l~ 22 (88)
|||+.+++.++++ +.+.|..+.
T Consensus 1 Mk~l~~~L~~~~lvl~~~l~~~~ 23 (134)
T 1s5l_U 1 MQRLGRWLALAYFVGVSLLGWIN 23 (134)
T ss_dssp -----------------------
T ss_pred CcHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999988 888777764
No 63
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.05 E-value=28 Score=22.69 Aligned_cols=16 Identities=25% Similarity=0.275 Sum_probs=14.4
Q ss_pred hHHHHHHHHHHHHHHH
Q 034652 62 PQEALLLQQDIKEAKE 77 (88)
Q Consensus 62 peA~~eL~~eI~eAk~ 77 (88)
+|.+++|.+.|+|||+
T Consensus 109 ~e~a~~f~~~~~e~k~ 124 (125)
T 2ec1_A 109 SEDADELHKILLEKKD 124 (125)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhc
Confidence 6889999999999985
No 64
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=34.93 E-value=39 Score=21.32 Aligned_cols=26 Identities=8% Similarity=0.210 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 62 PQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
++..++.++.++++++.+++.|++++
T Consensus 70 ~~~~~~~~~~l~~~~~~~~~~g~~~~ 95 (155)
T 3dlo_A 70 DEDIIEAKETLSWAVSIIRKEGAEGE 95 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 45566777888999999999998753
No 65
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=34.75 E-value=28 Score=20.14 Aligned_cols=17 Identities=24% Similarity=0.507 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhcCCcc
Q 034652 70 QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~ 86 (88)
++++++.+.|+++|+++
T Consensus 83 ~~v~~~~~~l~~~G~~~ 99 (127)
T 3e5d_A 83 EAVDELTEKLRQDGFAI 99 (127)
T ss_dssp HHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHcCCeE
Confidence 35888899999999876
No 66
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=34.49 E-value=26 Score=21.43 Aligned_cols=24 Identities=21% Similarity=0.527 Sum_probs=16.3
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
+++-+.||-. ..||+.|+++|+++
T Consensus 21 vy~~~~Cp~C--------~~ak~~L~~~~i~~ 44 (114)
T 3h8q_A 21 IFSKSYCPHS--------TRVKELFSSLGVEC 44 (114)
T ss_dssp EEECTTCHHH--------HHHHHHHHHTTCCC
T ss_pred EEEcCCCCcH--------HHHHHHHHHcCCCc
Confidence 4555677765 46777777777765
No 67
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=34.45 E-value=33 Score=23.37 Aligned_cols=22 Identities=41% Similarity=0.569 Sum_probs=18.4
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 58 FPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 58 FnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
|.+.| +|.++=+.|+++|+.+.
T Consensus 130 f~~~~--------~i~~~y~~Lk~~G~~f~ 151 (171)
T 1juq_A 130 LPEEA--------KIKDAYHMLKRQGIVQS 151 (171)
T ss_dssp CTTCH--------HHHHHHHHHHHTTSCSS
T ss_pred cCCCc--------HHHHHHHHHHHCCCCCC
Confidence 67766 39999999999999873
No 68
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=34.27 E-value=26 Score=21.93 Aligned_cols=23 Identities=26% Similarity=0.339 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHhcCCccCC
Q 034652 66 LLLQQDIKEAKEYLERKGIDVSE 88 (88)
Q Consensus 66 ~eL~~eI~eAk~dL~~kG~~~d~ 88 (88)
+|-++.|++-++.+.+-|+++++
T Consensus 55 ~er~~Kl~~~~e~l~~~GI~~ee 77 (86)
T 3nr7_A 55 EERTRKLQQYREMLIADGIDPNE 77 (86)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHH
Confidence 34445688888899999998763
No 69
>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A*
Probab=34.08 E-value=30 Score=23.85 Aligned_cols=27 Identities=15% Similarity=0.212 Sum_probs=22.2
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~k 82 (88)
..|++-+|=.+.++++|+.||+.|.+.
T Consensus 124 ~kF~sle~L~~qI~~D~~~ar~~l~~~ 150 (163)
T 1n08_A 124 LNYAGLDKLIEDIHTDIRVALNSMDRP 150 (163)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 358888888889999999999988653
No 70
>3ewt_E Tumor necrosis factor receptor superfamily member 6; calmodulin-peptide complex, FAS, death domain, calcium, calcium binding protein; 2.40A {Homo sapiens}
Probab=34.00 E-value=35 Score=16.95 Aligned_cols=14 Identities=14% Similarity=0.657 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhcCC.
Q 034652 71 DIKEAKEYLERKGI. 84 (88)
Q Consensus 71 eI~eAk~dL~~kG~. 84 (88)
.|+|.|++-|+.|+
T Consensus 12 ~~~~Vk~fvR~~gi. 25 (25)
T 3ewt_E 12 TLSQVKGFVRKNGVx 26 (26)
T ss_pred hHHHHHHHHHHcCC.
Confidence 68999999999986
No 71
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=33.69 E-value=17 Score=22.32 Aligned_cols=31 Identities=10% Similarity=0.215 Sum_probs=23.2
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
+....||...+|...++++..+.++.+|+.+
T Consensus 37 F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~ 67 (160)
T 3lor_A 37 VFQMLCPGCVNHGVPQAQKIHRMIDESQVQV 67 (160)
T ss_dssp EECTTCHHHHHTHHHHHHHHHHHSCTTTEEE
T ss_pred EEcCCCcchhhhhhHHHHHHHHHhCcCCcEE
Confidence 3345799888877778888888888777654
No 72
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=33.47 E-value=29 Score=20.87 Aligned_cols=16 Identities=13% Similarity=0.144 Sum_probs=13.9
Q ss_pred HHHHHHHHHHhcCCcc
Q 034652 71 DIKEAKEYLERKGIDV 86 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~ 86 (88)
+++++.+.|+++|+++
T Consensus 84 dv~~~~~~l~~~G~~~ 99 (138)
T 2a4x_A 84 SVDKKYAELVDAGYEG 99 (138)
T ss_dssp HHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHCCCce
Confidence 7888899999999875
No 73
>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}
Probab=33.28 E-value=33 Score=20.51 Aligned_cols=18 Identities=22% Similarity=0.396 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
++++++.+.|+++|+++.
T Consensus 84 ~d~~~~~~~l~~~G~~~~ 101 (136)
T 2rk0_A 84 TDLDVLEERLAKAGAAFT 101 (136)
T ss_dssp HHHHHHHHHHHHHTCCBC
T ss_pred HHHHHHHHHHHHCCCccc
Confidence 478889999999998764
No 74
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=32.91 E-value=44 Score=21.26 Aligned_cols=20 Identities=10% Similarity=-0.007 Sum_probs=15.8
Q ss_pred hHHHHHHHHHHHHHHHHHHh
Q 034652 62 PQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL~~ 81 (88)
.++.++|++||++.|+++++
T Consensus 13 ~~~~~~l~~~i~~lkeel~~ 32 (109)
T 2wg5_A 13 EDKVEELLSKNYHLENEVAR 32 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 46778888888888888764
No 75
>1r73_A TM1492, 50S ribosomal protein L29; ribosome, structural genomics, PSI, protein structure initiative, joint center for structural genomics; NMR {Thermotoga maritima} SCOP: a.2.2.1
Probab=32.76 E-value=31 Score=20.28 Aligned_cols=17 Identities=24% Similarity=0.155 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHh
Q 034652 65 ALLLQQDIKEAKEYLER 81 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~~ 81 (88)
.+||++++.|.|++|-.
T Consensus 11 ~~EL~~~l~elk~ELf~ 27 (66)
T 1r73_A 11 DEELKNLLEEKKRQLME 27 (66)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47899999999988743
No 76
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=32.51 E-value=31 Score=19.61 Aligned_cols=24 Identities=42% Similarity=0.657 Sum_probs=15.1
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
+++.+.||... .||..|+++|+++
T Consensus 10 ly~~~~C~~C~--------~~~~~L~~~~i~~ 33 (92)
T 2khp_A 10 IYTRPGCPYCA--------RAKALLARKGAEF 33 (92)
T ss_dssp EEECTTCHHHH--------HHHHHHHHTTCCC
T ss_pred EEECCCChhHH--------HHHHHHHHcCCCc
Confidence 45567777654 4666666777654
No 77
>2d9i_A NEDD4-binding protein 2; SMR domain, N4BP2, BCL-3 binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.68.8.1
Probab=32.40 E-value=57 Score=19.71 Aligned_cols=25 Identities=12% Similarity=0.123 Sum_probs=19.5
Q ss_pred CchHHHHHHHHHHHHHHHHHH-hcCC
Q 034652 60 TCPQEALLLQQDIKEAKEYLE-RKGI 84 (88)
Q Consensus 60 DcpeA~~eL~~eI~eAk~dL~-~kG~ 84 (88)
+.+||..+|.+-|++|...++ +.|+
T Consensus 17 ~v~eA~~~L~~~L~~~~~~~~~~~g~ 42 (96)
T 2d9i_A 17 HVDEALEHLMRVLEKKTEEFKQNGGK 42 (96)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 468999999999999986554 3564
No 78
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=32.39 E-value=26 Score=22.34 Aligned_cols=24 Identities=29% Similarity=0.574 Sum_probs=17.8
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
+++.++||-. +.||+.|+++|+++
T Consensus 5 lY~~~~C~~C--------~ka~~~L~~~gi~y 28 (132)
T 1z3e_A 5 LYTSPSCTSC--------RKARAWLEEHEIPF 28 (132)
T ss_dssp EEECTTCHHH--------HHHHHHHHHTTCCE
T ss_pred EEeCCCChHH--------HHHHHHHHHcCCce
Confidence 4567788854 46888888888875
No 79
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=31.86 E-value=24 Score=22.15 Aligned_cols=25 Identities=32% Similarity=0.571 Sum_probs=17.2
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+++-+.||-. +.||+.|+++|++++
T Consensus 9 iY~~~~C~~C--------~ka~~~L~~~gi~y~ 33 (120)
T 2kok_A 9 IYGIKNCDTM--------KKARIWLEDHGIDYT 33 (120)
T ss_dssp EEECSSCHHH--------HHHHHHHHHHTCCEE
T ss_pred EEECCCChHH--------HHHHHHHHHcCCcEE
Confidence 4566778754 467788888887653
No 80
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=31.56 E-value=44 Score=20.12 Aligned_cols=24 Identities=8% Similarity=0.328 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-cc
Q 034652 63 QEALLLQQDIKEAKEYLERKGI-DV 86 (88)
Q Consensus 63 eA~~eL~~eI~eAk~dL~~kG~-~~ 86 (88)
+..++.++.++++++.+++.|+ ++
T Consensus 62 ~~~~~~~~~l~~~~~~~~~~g~~~~ 86 (146)
T 3s3t_A 62 AEAAHAKDAMRQRQQFVATTSAPNL 86 (146)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcce
Confidence 3445556667888888888888 65
No 81
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=31.48 E-value=39 Score=23.51 Aligned_cols=22 Identities=5% Similarity=0.131 Sum_probs=15.6
Q ss_pred chHHHHHHHHHHHHHHHHHHhc
Q 034652 61 CPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 61 cpeA~~eL~~eI~eAk~dL~~k 82 (88)
-|+++++|.+||.+.+.+++..
T Consensus 111 DeakI~aL~~Ei~~Lr~qL~~~ 132 (175)
T 3lay_A 111 DTAKINAVAKEMESLGQKLDEQ 132 (175)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 3457788888888877776543
No 82
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=31.31 E-value=28 Score=20.97 Aligned_cols=24 Identities=33% Similarity=0.643 Sum_probs=14.3
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
|++.+.||-.. .||+.|+++|+++
T Consensus 20 vy~~~~Cp~C~--------~ak~~L~~~~i~y 43 (99)
T 3qmx_A 20 IYTWSTCPFCM--------RALALLKRKGVEF 43 (99)
T ss_dssp EEECTTCHHHH--------HHHHHHHHHTCCC
T ss_pred EEEcCCChhHH--------HHHHHHHHCCCCC
Confidence 56677777543 4555566666554
No 83
>3v2d_2 50S ribosomal protein L29; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_W 1vsa_W 2j03_2 2jl6_2 2jl8_2 2v47_2 2v49_2 2wdi_2 2wdj_2 2wdl_2 2wdn_2 2wh2_2 2wh4_2 2wrj_2 2wrl_2 2wro_2 2wrr_2 2x9s_2 2x9u_2 2xg0_2 ...
Probab=31.22 E-value=34 Score=20.54 Aligned_cols=17 Identities=24% Similarity=0.292 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHh
Q 034652 65 ALLLQQDIKEAKEYLER 81 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~~ 81 (88)
.+||++++.|.|++|-.
T Consensus 18 ~eEL~~~L~elk~ELf~ 34 (72)
T 3v2d_2 18 PVELEKLVREKKRELME 34 (72)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47899999999988754
No 84
>2z8f_A Galacto-N-biose/lacto-N-biose I transporter subst binding protein; ABC transporter, mucin core-1, human MILK oligosacchalide; HET: BGC GAL NAG MES; 1.65A {Bifidobacterium longum} PDB: 2z8e_A* 2z8d_A*
Probab=31.09 E-value=48 Score=23.88 Aligned_cols=25 Identities=20% Similarity=0.092 Sum_probs=19.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 60 TCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 60 DcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
|-+||.+++++++++ .|+++|..+.
T Consensus 387 ~~~~al~~~~~~~~~---~l~~~G~~~~ 411 (412)
T 2z8f_A 387 KVADIFSDAQTTSVD---TLKNFGLSVS 411 (412)
T ss_dssp CTHHHHHHHHHHHHH---HHHHTTCCBC
T ss_pred CHHHHHHHHHHHHHH---HHHhcCCccc
Confidence 688888998888765 5788998875
No 85
>3j21_W 50S ribosomal protein L29P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.83 E-value=35 Score=20.49 Aligned_cols=17 Identities=18% Similarity=0.229 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHh
Q 034652 65 ALLLQQDIKEAKEYLER 81 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~~ 81 (88)
.+||++++.|.|++|-.
T Consensus 11 ~~EL~~~L~elk~ELf~ 27 (72)
T 3j21_W 11 IEEIDAKIRELRLQLAK 27 (72)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47899999999998754
No 86
>1nd9_A Translation initiation factor IF-2; NMR {Escherichia coli} SCOP: a.6.1.6
Probab=30.75 E-value=20 Score=18.72 Aligned_cols=23 Identities=17% Similarity=0.143 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCC
Q 034652 62 PQEALLLQQDIKEAKEYLERKGI 84 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL~~kG~ 84 (88)
-|-++||....++.-+.|++.|+
T Consensus 6 ~~lAkel~~~~k~l~~~l~~~g~ 28 (49)
T 1nd9_A 6 KTLAAERQTSVERLVQQFADAGI 28 (49)
T ss_dssp THHHHHHSSSHHHHHHHHHHHTS
T ss_pred HHHHHHHCcCHHHHHHHHHHcCC
Confidence 46788998889999999999998
No 87
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=30.60 E-value=48 Score=21.88 Aligned_cols=17 Identities=18% Similarity=0.165 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHh
Q 034652 65 ALLLQQDIKEAKEYLER 81 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~~ 81 (88)
.++|++|.++|.+.|++
T Consensus 94 i~~L~~E~~~~~~el~~ 110 (132)
T 1ykh_B 94 IDMLQKKLVEVEDEKIE 110 (132)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34555555555555543
No 88
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=30.44 E-value=56 Score=19.48 Aligned_cols=22 Identities=14% Similarity=0.129 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHhcCCccC
Q 034652 66 LLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 66 ~eL~~eI~eAk~dL~~kG~~~d 87 (88)
++.++.++++++.+++.|++++
T Consensus 62 ~~~~~~l~~~~~~~~~~g~~~~ 83 (138)
T 3idf_A 62 EKAKLLTQKFSTFFTEKGINPF 83 (138)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCE
T ss_pred HHHHHHHHHHHHHHHHCCCCeE
Confidence 5556677888888888898763
No 89
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=30.43 E-value=37 Score=18.13 Aligned_cols=23 Identities=30% Similarity=0.502 Sum_probs=12.2
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
++.+.||-.. .++..|+++|+++
T Consensus 6 y~~~~C~~C~--------~~~~~l~~~~i~~ 28 (75)
T 1r7h_A 6 YTKPACVQCT--------ATKKALDRAGLAY 28 (75)
T ss_dssp EECTTCHHHH--------HHHHHHHHTTCCC
T ss_pred EeCCCChHHH--------HHHHHHHHcCCCc
Confidence 4556666553 2455555556554
No 90
>1whg_A Tubulin specific chaperone B; microtubule binding, cytoskeleton associated protein, ckapi, structural genomics; NMR {Mus musculus} SCOP: b.34.10.1
Probab=29.96 E-value=56 Score=21.29 Aligned_cols=32 Identities=9% Similarity=-0.057 Sum_probs=21.8
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcCCccCC
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKGIDVSE 88 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d~ 88 (88)
.||.-.++..|.+++.++...+....++.+.|
T Consensus 6 rf~~~~~~~~~~~~~~~~~~~~~~~~~~~VG~ 37 (113)
T 1whg_A 6 SGNEELRAQQEAEAAQRLSEEKAQASAISVGS 37 (113)
T ss_dssp CCCSTHHHHHHHHHHHTTHHHHHHHTTSCSSC
T ss_pred ccChhhhhhhhhHhhhhhhHhhhhhhcCCCCC
Confidence 57776666566666666777777777777654
No 91
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=29.84 E-value=26 Score=20.32 Aligned_cols=19 Identities=11% Similarity=0.214 Sum_probs=15.0
Q ss_pred hhhccCCchHHHHHHHHHH
Q 034652 54 GLMYFPTCPQEALLLQQDI 72 (88)
Q Consensus 54 ~v~tFnDcpeA~~eL~~eI 72 (88)
.-..|.|.+-|.++|++-.
T Consensus 29 SAL~feDv~tA~~~L~~AL 47 (53)
T 2rkl_A 29 SALNYEDLPTAKDELTKAL 47 (53)
T ss_dssp HHHTTTCHHHHHHHHHHHH
T ss_pred HHcccccHHHHHHHHHHHH
Confidence 4468999999999988744
No 92
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=29.72 E-value=33 Score=20.71 Aligned_cols=17 Identities=6% Similarity=0.089 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhcCCcc
Q 034652 70 QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~ 86 (88)
++++++.+.|+++|+++
T Consensus 87 ~dv~~~~~~l~~~G~~~ 103 (141)
T 2rbb_A 87 EAVDKLVPVAIAAGATL 103 (141)
T ss_dssp HHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCeE
Confidence 37888899999999875
No 93
>3r8s_Y 50S ribosomal protein L29; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_W 1p86_W 1vs8_X 1vs6_X 2aw4_X 2awb_X 1vt2_Y 2i2v_Y 2j28_X 2i2t_Y* 2qao_X* 2qba_X* 2qbc_X* 2qbe_X 2qbg_X 2qbi_X* 2qbk_X* 2qov_X 2qox_X 2qoz_X* ...
Probab=29.60 E-value=30 Score=20.22 Aligned_cols=17 Identities=6% Similarity=-0.140 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHh
Q 034652 65 ALLLQQDIKEAKEYLER 81 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~~ 81 (88)
.+||++++.|.|++|-.
T Consensus 11 ~~EL~~~l~elk~Elf~ 27 (63)
T 3r8s_Y 11 VEELNTELLNLLREQFN 27 (63)
T ss_dssp HHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47899999999988754
No 94
>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A*
Probab=29.53 E-value=31 Score=23.26 Aligned_cols=26 Identities=35% Similarity=0.318 Sum_probs=21.3
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
..|++-+|=.+.++++|+.||+.|.+
T Consensus 106 ~kF~sle~L~~qI~~D~~~ar~~l~~ 131 (147)
T 1nb0_A 106 KNFDSLESLISAIQGDIEEAKKRLEL 131 (147)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHTTS
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 35888888888899999999998854
No 95
>3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei}
Probab=29.17 E-value=39 Score=23.69 Aligned_cols=26 Identities=12% Similarity=0.209 Sum_probs=21.8
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
..|++-+|=.+.++++|+.||+.|.+
T Consensus 128 ~kF~sle~L~~QI~~Di~~Ar~~l~~ 153 (181)
T 3bnw_A 128 GSFHSLQALVDTIKSDVQFTRDMLQK 153 (181)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 35888888888999999999998864
No 96
>3f42_A Protein HP0035; helicobacter pylori unknown-function, structural genomics, P protein structure initiative; HET: MSE; 1.78A {Helicobacter pylori}
Probab=29.15 E-value=40 Score=21.38 Aligned_cols=20 Identities=5% Similarity=-0.069 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHhcCCc
Q 034652 66 LLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 66 ~eL~~eI~eAk~dL~~kG~~ 85 (88)
+++|+++++++++|.++-++
T Consensus 13 q~mQ~~m~~~QeeL~~~~v~ 32 (99)
T 3f42_A 13 DGMKKEFSQLEEKNKDTIHT 32 (99)
T ss_dssp HHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHHhcCEEE
Confidence 78999999999999987543
No 97
>2l3l_A Tubulin-specific chaperone C; tubulin binding cofactor; NMR {Homo sapiens}
Probab=29.08 E-value=38 Score=21.88 Aligned_cols=24 Identities=21% Similarity=0.178 Sum_probs=19.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhc
Q 034652 59 PTCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 59 nDcpeA~~eL~~eI~eAk~dL~~k 82 (88)
+-|-++.++|+..++|++..|.=|
T Consensus 87 R~~q~~i~~L~~~l~e~r~~l~PK 110 (111)
T 2l3l_A 87 RQGQEALARLQAALAERRRGLQPK 110 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 347889999999999999887544
No 98
>1l2p_A ATP synthase B chain; alpha helix, hydrolase; 1.55A {Escherichia coli} SCOP: f.23.21.1
Probab=28.78 E-value=47 Score=18.44 Aligned_cols=18 Identities=28% Similarity=0.318 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 034652 63 QEALLLQQDIKEAKEYLE 80 (88)
Q Consensus 63 eA~~eL~~eI~eAk~dL~ 80 (88)
+|..++..|.+.|+.+||
T Consensus 43 ~A~~eie~ek~~A~~~Lr 60 (61)
T 1l2p_A 43 QAQAEIEAERKRAREELR 60 (61)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 455666666666666665
No 99
>1vq8_V 50S ribosomal protein L29P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: a.2.2.1 PDB: 1vq4_V* 1vq5_V* 1vq6_V* 1vq7_V* 1s72_V* 1vq9_V* 1vqk_V* 1vql_V* 1vqm_V* 1vqn_V* 1vqo_V* 1vqp_V* 1yhq_V* 1yi2_V* 1yij_V* 1yit_V* 1yj9_V* 1yjn_V* 1yjw_V* 2otj_V* ...
Probab=28.71 E-value=40 Score=20.13 Aligned_cols=17 Identities=12% Similarity=0.100 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHh
Q 034652 65 ALLLQQDIKEAKEYLER 81 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~~ 81 (88)
.+||++++.+.|++|-.
T Consensus 14 ~~EL~~~l~elk~ELf~ 30 (71)
T 1vq8_V 14 PAEREAELDDLKTELLN 30 (71)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47899999999988753
No 100
>3m1f_V VOPL, putative uncharacterized protein VPA1370; actin, actin-binding protein, crosslinking, nucleator, prote protein interaction; HET: HIC ATP; 2.89A {Oryctolagus cuniculus}
Probab=28.69 E-value=28 Score=18.17 Aligned_cols=15 Identities=20% Similarity=0.567 Sum_probs=12.6
Q ss_pred CchHHHHHHHHHHHH
Q 034652 60 TCPQEALLLQQDIKE 74 (88)
Q Consensus 60 DcpeA~~eL~~eI~e 74 (88)
.|.|..-.|++||.+
T Consensus 1 scnedrSKLMEqIRq 15 (31)
T 3m1f_V 1 SCNEDHSKLMEQIRQ 15 (31)
T ss_dssp CCSTTHHHHHHHHHH
T ss_pred CcchhHHHHHHHHHh
Confidence 488889999999964
No 101
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=28.68 E-value=63 Score=19.89 Aligned_cols=27 Identities=11% Similarity=0.172 Sum_probs=20.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 59 PTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 59 nDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
..||-.-.|+ .++++..+.++++|+.+
T Consensus 46 ~~c~~C~~~~-~~l~~~~~~~~~~~~~v 72 (163)
T 3gkn_A 46 DSTPGATTEG-LDFNALLPEFDKAGAKI 72 (163)
T ss_dssp TTSHHHHHHH-HHHHHHHHHHHHTTCEE
T ss_pred CCCCcHHHHH-HHHHHHHHHHHHCCCEE
Confidence 4588877664 56888888899998765
No 102
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=28.67 E-value=59 Score=23.42 Aligned_cols=28 Identities=18% Similarity=0.236 Sum_probs=23.5
Q ss_pred HHHHHHhhhccCCchHHHHHHHHHHHHH
Q 034652 48 LLMVGIGLMYFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 48 l~~vgy~v~tFnDcpeA~~eL~~eI~eA 75 (88)
..++.|.+...-..||..+.|++||+++
T Consensus 260 a~~l~~~l~~L~~~P~~~~kl~~Ei~~~ 287 (456)
T 3mdm_A 260 ANHLAFTVMELSRQPEIVARLQAEVDEV 287 (456)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 3467777888888999999999999876
No 103
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=28.66 E-value=65 Score=18.22 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcC
Q 034652 62 PQEALLLQQDIKEAKEYLERKG 83 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL~~kG 83 (88)
.+.|+++.++=++...+++++|
T Consensus 52 ~~~A~~~k~~y~~~~~~Y~~kg 73 (73)
T 3nm9_A 52 EAKAAKAKDDYDRAVKEFEANG 73 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 3556667777777788888876
No 104
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=28.66 E-value=53 Score=22.31 Aligned_cols=15 Identities=20% Similarity=0.195 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHH
Q 034652 66 LLLQQDIKEAKEYLE 80 (88)
Q Consensus 66 ~eL~~eI~eAk~dL~ 80 (88)
++|++|.++|.+.|+
T Consensus 95 ~~Le~E~~~~~~el~ 109 (151)
T 1yke_B 95 DMLQKKLVEVEDEKI 109 (151)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 445555555554444
No 105
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=28.64 E-value=35 Score=25.25 Aligned_cols=14 Identities=14% Similarity=0.190 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHhc
Q 034652 69 QQDIKEAKEYLERK 82 (88)
Q Consensus 69 ~~eI~eAk~dL~~k 82 (88)
++||++|++|+++-
T Consensus 261 ~eeI~qA~~d~~~g 274 (290)
T 1j1l_A 261 NEEISQAILDFRNA 274 (290)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc
Confidence 35799999999983
No 106
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=28.59 E-value=57 Score=20.93 Aligned_cols=23 Identities=26% Similarity=0.323 Sum_probs=18.5
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHH
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLE 80 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~ 80 (88)
+|.+ |+++..-.+.+++|-++|+
T Consensus 92 nF~s-e~eA~~F~~~v~~al~~l~ 114 (115)
T 1egx_A 92 NFGS-KEDAAQFAAGMASALEALE 114 (115)
T ss_dssp EESS-HHHHHHHHHHHHHHHHHHH
T ss_pred ecCC-HHHHHHHHHHHHHHHHHhc
Confidence 5666 6777778999999999885
No 107
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=28.56 E-value=52 Score=18.89 Aligned_cols=20 Identities=45% Similarity=0.831 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHhcCCc
Q 034652 66 LLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 66 ~eL~~eI~eAk~dL~~kG~~ 85 (88)
.+..++|.+|.+-|+..+++
T Consensus 51 ~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 51 PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHhhhhhc
Confidence 34678999999999887653
No 108
>3qth_A Uncharacterized protein; DINB/YFIT-like putative metalloenzymes, structural genomics, center for structural genomics, JCSG; HET: MSE; 2.20A {Colwellia psychrerythraea}
Probab=28.45 E-value=36 Score=23.85 Aligned_cols=48 Identities=13% Similarity=0.080 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHH-----HHhhhccCCchHHHHHHHHHHHHHHHHHHhc
Q 034652 35 LPIYFIVSLGCYGLLMV-----GIGLMYFPTCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 35 lP~~~lv~fG~Ysl~~v-----gy~v~tFnDcpeA~~eL~~eI~eAk~dL~~k 82 (88)
+|+..=|-+.|-..-.. |--+-.|+|-|.-..||++.|+++.+.|++-
T Consensus 50 ~PL~~QVq~a~d~A~~~~arL~G~e~p~~~d~e~tfa~L~arI~~ti~~L~~~ 102 (176)
T 3qth_A 50 FPFNVQAKIATNFALRACCPLSGKEYKELEGDIDSFCGLKTYVVTAIDYINKL 102 (176)
T ss_dssp CCHHHHHHHHHHHHHHHHTGGGTCCCCCCCCCCSSHHHHHHHHHHHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 45555444444433333 3344679999999999999999999999875
No 109
>3faj_A ORF131, putative uncharacterized protein; archaeal virus, extremophiles, bicaudavirus, structural PROT binding protein; 1.70A {Acidianus two-tailed virus}
Probab=28.44 E-value=14 Score=25.45 Aligned_cols=31 Identities=13% Similarity=0.027 Sum_probs=20.8
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
.|.|..|+..|+.|-|.||-+-+|.||--|.
T Consensus 67 G~E~~keaIHeiIK~IreA~kPyr~~g~gf~ 97 (151)
T 3faj_A 67 GDERTKEAIHAIVKMISDAMKPYRNKGSGFQ 97 (151)
T ss_dssp TCHHHHHHHHHHHHHHHHHHGGGC-------
T ss_pred ChHHHHHHHHHHHHHHHHHhcccccCCCCcc
Confidence 3566778889999999999999999886554
No 110
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=28.40 E-value=27 Score=21.44 Aligned_cols=17 Identities=41% Similarity=0.643 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHhcCCcc
Q 034652 70 QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~ 86 (88)
++++++.+.|+++|+++
T Consensus 96 ~dld~~~~~l~~~G~~~ 112 (141)
T 3ghj_A 96 SEIEPLKKALESKGVSV 112 (141)
T ss_dssp GGHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHCCCeE
Confidence 36888888999999876
No 111
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=28.39 E-value=25 Score=21.13 Aligned_cols=16 Identities=13% Similarity=0.133 Sum_probs=14.0
Q ss_pred HHHHHHHHHHhcCCcc
Q 034652 71 DIKEAKEYLERKGIDV 86 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~ 86 (88)
+++++.+.|+++|+++
T Consensus 108 d~~~~~~~l~~~G~~~ 123 (156)
T 3kol_A 108 LFDRAVTVIGENKIAI 123 (156)
T ss_dssp GHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHCCCcc
Confidence 7888999999999876
No 112
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=28.20 E-value=24 Score=20.58 Aligned_cols=17 Identities=18% Similarity=0.407 Sum_probs=14.0
Q ss_pred HHHHHHHHHHhcCCccC
Q 034652 71 DIKEAKEYLERKGIDVS 87 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~d 87 (88)
+++++.+.|+++|+++.
T Consensus 83 d~~~~~~~l~~~G~~~~ 99 (133)
T 3ey7_A 83 VLSDAMKHVEDQGVTIM 99 (133)
T ss_dssp CHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHCCCccc
Confidence 48888888999998874
No 113
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=28.16 E-value=32 Score=19.15 Aligned_cols=22 Identities=18% Similarity=0.240 Sum_probs=11.1
Q ss_pred CCchHHHHHHHHHHHHHHHHHH
Q 034652 59 PTCPQEALLLQQDIKEAKEYLE 80 (88)
Q Consensus 59 nDcpeA~~eL~~eI~eAk~dL~ 80 (88)
++|.+-..+...++++++..+.
T Consensus 15 ~~~~~~~~~~~~~~~~~k~~~~ 36 (60)
T 3htk_A 15 EELTEKCSLKTDEFLKAKEKIN 36 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4454455555555555555443
No 114
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=28.00 E-value=37 Score=22.12 Aligned_cols=26 Identities=15% Similarity=0.249 Sum_probs=18.3
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~k 82 (88)
++|.| +|+|.+-.+.+++|.+.++++
T Consensus 90 L~F~s-e~eA~~F~~~~~~al~~~~~~ 115 (130)
T 1qc6_A 90 LNFAS-KEEATTFSNAMLFALNIMNSQ 115 (130)
T ss_dssp EEESC-HHHHHHHHHHHHHHHHHTC--
T ss_pred EecCC-HHHHHHHHHHHHHHHHHHhcC
Confidence 36777 555667788999999887664
No 115
>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0
Probab=27.96 E-value=30 Score=19.93 Aligned_cols=16 Identities=31% Similarity=0.327 Sum_probs=13.3
Q ss_pred HHHHHHHHHHhcCCcc
Q 034652 71 DIKEAKEYLERKGIDV 86 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~ 86 (88)
+++++.+.|+++|+++
T Consensus 87 d~~~~~~~l~~~G~~~ 102 (134)
T 3rmu_A 87 NINAAVMDLKKKKIRS 102 (134)
T ss_dssp CHHHHHHHHHHTTCTT
T ss_pred CHHHHHHHHHHcCCcc
Confidence 4778888999999886
No 116
>1h1j_S THO1 protein; SAP domain, DNA binding; NMR {Saccharomyces cerevisiae} SCOP: a.140.2.1 PDB: 2wqg_A
Probab=27.48 E-value=43 Score=18.91 Aligned_cols=16 Identities=19% Similarity=0.513 Sum_probs=12.7
Q ss_pred HHHHHHHHHhcCCccC
Q 034652 72 IKEAKEYLERKGIDVS 87 (88)
Q Consensus 72 I~eAk~dL~~kG~~~d 87 (88)
+.|=|+.|++||++..
T Consensus 10 V~eLK~~Lk~RGL~~~ 25 (51)
T 1h1j_S 10 VVQLKDLLTKRNLSVG 25 (51)
T ss_dssp HHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHcCCCCC
Confidence 5677889999998763
No 117
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=27.11 E-value=55 Score=21.48 Aligned_cols=25 Identities=24% Similarity=0.436 Sum_probs=19.2
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
++|.+ |+++..-.+.+++|-++|.+
T Consensus 102 LnF~s-e~eA~~F~~~v~~al~~l~~ 126 (126)
T 2jp2_A 102 LTFQS-PADARAFDRGVRKAIEDLIE 126 (126)
T ss_dssp EEESS-HHHHHHHHHHHHHHHHHHHC
T ss_pred EecCC-HHHHHHHHHHHHHHHHHhhC
Confidence 36777 66667779999999998863
No 118
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=26.78 E-value=42 Score=23.62 Aligned_cols=26 Identities=23% Similarity=0.114 Sum_probs=19.7
Q ss_pred HHHhhhccCCchHHHHHHHHHHHHHH
Q 034652 51 VGIGLMYFPTCPQEALLLQQDIKEAK 76 (88)
Q Consensus 51 vgy~v~tFnDcpeA~~eL~~eI~eAk 76 (88)
+|-.++.=+|..++.++++++++++.
T Consensus 196 vGsaIf~a~dp~~~~~~l~~~~~~~~ 221 (228)
T 3ovp_A 196 SGSAIMRSEDPRSVINLLRNVCSEAA 221 (228)
T ss_dssp ESHHHHTCSCHHHHHHHHHHHHHHHH
T ss_pred EeHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 34455666788899999999888764
No 119
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}
Probab=26.78 E-value=50 Score=20.39 Aligned_cols=18 Identities=11% Similarity=0.189 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
++++++.+.|+++|+++.
T Consensus 98 ~dv~~~~~~l~~~G~~~~ 115 (144)
T 2kjz_A 98 AQVDETFAGWKASGVAML 115 (144)
T ss_dssp HHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHCCCeEe
Confidence 368888899999998763
No 120
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=26.77 E-value=45 Score=20.89 Aligned_cols=18 Identities=28% Similarity=0.305 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
++++++.+.|+++|+++.
T Consensus 88 ~dld~~~~~l~~~G~~~~ 105 (160)
T 3r4q_A 88 AEVDEWKTRFEALEIPVE 105 (160)
T ss_dssp HHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 579999999999999873
No 121
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=26.75 E-value=34 Score=19.57 Aligned_cols=17 Identities=29% Similarity=0.640 Sum_probs=13.4
Q ss_pred HHHHHHHHHHhcCCccC
Q 034652 71 DIKEAKEYLERKGIDVS 87 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~d 87 (88)
+++++.+.|+++|+++.
T Consensus 83 d~~~~~~~l~~~G~~~~ 99 (126)
T 2p25_A 83 HIEEVIAFLNEQGIETE 99 (126)
T ss_dssp CHHHHHHHHHHTTCCCC
T ss_pred CHHHHHHHHHHcCCccc
Confidence 47778888899998764
No 122
>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8
Probab=26.67 E-value=42 Score=20.19 Aligned_cols=18 Identities=11% Similarity=0.174 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
++++++.+.|+++|+++.
T Consensus 89 ~~l~~~~~~l~~~G~~~~ 106 (139)
T 1twu_A 89 VELAAITSKLKHMGYQEV 106 (139)
T ss_dssp HHHHHHHHHHHHTTCCEE
T ss_pred chHHHHHHHHHHcCCcCc
Confidence 355888888999998763
No 123
>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2
Probab=26.63 E-value=42 Score=20.24 Aligned_cols=17 Identities=24% Similarity=0.558 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHhcCCcc
Q 034652 70 QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~ 86 (88)
++++++.+.|+++|+++
T Consensus 75 ~d~~~~~~~l~~~G~~~ 91 (141)
T 1npb_A 75 EDFEPLSQRLEQAGVTI 91 (141)
T ss_dssp HHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHCCCeE
Confidence 58899999999999875
No 124
>3uek_A Poly(ADP-ribose) glycohydrolase; mammalian PArg, macrodomain; 1.95A {Rattus norvegicus} PDB: 3uel_A*
Probab=26.62 E-value=30 Score=28.66 Aligned_cols=28 Identities=21% Similarity=0.412 Sum_probs=23.1
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhcCCccCC
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERKGIDVSE 88 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d~ 88 (88)
+||+|. ++++++.+--+.|+.||++|++
T Consensus 512 ~tF~D~-----el~~~l~~v~~~L~~k~~TVGd 539 (588)
T 3uek_A 512 FTFGDS-----ELMRDIYSMHTFLTERKLNVGK 539 (588)
T ss_dssp ECTTCH-----HHHHHHHHHHHHHHHTTCCHHH
T ss_pred eecCcH-----HHHHHHHHHHHHHHHcCCcHHH
Confidence 568884 6888999999999999998853
No 125
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=26.43 E-value=54 Score=20.49 Aligned_cols=31 Identities=13% Similarity=0.072 Sum_probs=26.2
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
.+-.|..++.+-|.+=|+.+++..+++|.++
T Consensus 58 ~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~ 88 (93)
T 2qn6_B 58 VVGTNPKEASEALNQIISNLIKIGKEENVDI 88 (93)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred EEecCHHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 3567888899999999999999999998654
No 126
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=26.31 E-value=61 Score=19.94 Aligned_cols=22 Identities=23% Similarity=0.283 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHhcCCccC
Q 034652 66 LLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 66 ~eL~~eI~eAk~dL~~kG~~~d 87 (88)
++.++.++++++.++..|++++
T Consensus 79 ~~~~~~l~~~~~~~~~~g~~~~ 100 (162)
T 1mjh_A 79 EEAKNKMENIKKELEDVGFKVK 100 (162)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCceE
Confidence 3445567778888888888653
No 127
>2wh0_Q Pkcev3, protein kinase C epsilon type, NPKC-epsilon; tandem binding, phosphoprotein, signaling protein, 14-3-3, cytoplasm, acetylation; HET: SEP; 2.25A {Homo sapiens}
Probab=26.02 E-value=53 Score=16.89 Aligned_cols=17 Identities=35% Similarity=0.604 Sum_probs=12.3
Q ss_pred CCchHHHHHHHHHHHHH
Q 034652 59 PTCPQEALLLQQDIKEA 75 (88)
Q Consensus 59 nDcpeA~~eL~~eI~eA 75 (88)
.-|.++.+||...|..|
T Consensus 9 spcdqeikelennirka 25 (31)
T 2wh0_Q 9 SPCDQEIKELENNIRKA 25 (31)
T ss_pred CchHHHHHHHHHHHHHH
Confidence 35778888887777655
No 128
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=25.93 E-value=53 Score=21.52 Aligned_cols=18 Identities=11% Similarity=0.202 Sum_probs=15.9
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 034652 62 PQEALLLQQDIKEAKEYL 79 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL 79 (88)
+|.|+++.+.|+|+|+..
T Consensus 105 ~e~A~~f~~~iee~~~~~ 122 (130)
T 3n7c_A 105 KADGRRLVGAVADAQQAM 122 (130)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 788999999999999864
No 129
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=25.90 E-value=41 Score=24.73 Aligned_cols=20 Identities=25% Similarity=0.321 Sum_probs=16.6
Q ss_pred hccCCchHHHHHHHHHHHHH
Q 034652 56 MYFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eA 75 (88)
....||||.+++|.++|+|.
T Consensus 251 I~h~~~~e~a~~l~~~l~~~ 270 (298)
T 3jr7_A 251 IAHCNCEERAKEVQRLLKER 270 (298)
T ss_dssp EEESSCHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHHHHHHHhh
Confidence 45678999999999998864
No 130
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=25.66 E-value=32 Score=19.79 Aligned_cols=17 Identities=29% Similarity=0.477 Sum_probs=13.4
Q ss_pred HHHHHHHHHHhcCCccC
Q 034652 71 DIKEAKEYLERKGIDVS 87 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~d 87 (88)
+++++.+.|+++|+++.
T Consensus 91 d~~~~~~~l~~~G~~~~ 107 (134)
T 3l7t_A 91 DVEASRQELIALGIRVE 107 (134)
T ss_dssp CHHHHHHHHHHHTCCCC
T ss_pred CHHHHHHHHHhCCCccc
Confidence 47788888888998764
No 131
>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A
Probab=25.63 E-value=45 Score=19.92 Aligned_cols=17 Identities=18% Similarity=0.257 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHhcCCcc
Q 034652 70 QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~ 86 (88)
++++++.+.|+++|+++
T Consensus 72 ~d~~~~~~~l~~~G~~~ 88 (135)
T 1nki_A 72 ADFARFAAQLRAHGVRE 88 (135)
T ss_dssp HHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHCCCce
Confidence 58889999999999876
No 132
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=25.60 E-value=86 Score=18.98 Aligned_cols=23 Identities=13% Similarity=0.102 Sum_probs=18.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHhc
Q 034652 60 TCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 60 DcpeA~~eL~~eI~eAk~dL~~k 82 (88)
+.++++.|-.++|.+|-+-|.+.
T Consensus 51 ~~~~~a~~~F~~I~~AYevL~~~ 73 (88)
T 1iur_A 51 ENHDIANEVFKHLQNEINRLEKQ 73 (88)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhh
Confidence 34466888899999999999874
No 133
>4a0d_A Poly(ADP-ribose) glycohydrolase; 1.75A {Homo sapiens} PDB: 4fc2_A
Probab=25.46 E-value=32 Score=27.90 Aligned_cols=27 Identities=22% Similarity=0.326 Sum_probs=22.1
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
.||+| +||++++.+..+.+++++++|.
T Consensus 455 ~tF~d-----~~l~~~l~~~~~~l~~~~~TVg 481 (531)
T 4a0d_A 455 FTFGD-----SELMRDIYSMHIFLTERKLTVG 481 (531)
T ss_dssp ECTTC-----HHHHHHHHHHHHHHHHTTCBHH
T ss_pred EeCCC-----HHHHHHHHHHHHHHHHcCCcHH
Confidence 58888 3578888888899999998874
No 134
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=25.43 E-value=53 Score=19.74 Aligned_cols=30 Identities=13% Similarity=0.210 Sum_probs=20.5
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
+....||....++ .++++..+.++++|+.+
T Consensus 35 f~~~~C~~C~~~~-~~l~~l~~~~~~~~~~~ 64 (152)
T 3gl3_A 35 FWASWCGPCRQSF-PWMNQMQAKYKAKGFQV 64 (152)
T ss_dssp EECTTCTHHHHHH-HHHHHHHHHHGGGTEEE
T ss_pred EECCcCHHHHHHH-HHHHHHHHHhhcCCeEE
Confidence 3456788865544 45888888888887654
No 135
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=25.39 E-value=34 Score=23.74 Aligned_cols=25 Identities=24% Similarity=0.307 Sum_probs=19.0
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCCccCC
Q 034652 61 CPQEALLLQQDIKEAKEYLERKGIDVSE 88 (88)
Q Consensus 61 cpeA~~eL~~eI~eAk~dL~~kG~~~d~ 88 (88)
|.++..+|+++| |+.|+++|.+|.|
T Consensus 10 sDhaG~~lK~~i---~~~L~~~G~eV~D 34 (162)
T 2vvp_A 10 ADHAGYELKQRI---IEHLKQTGHEPID 34 (162)
T ss_dssp ECHHHHHHHHHH---HHHHHHTTCEEEE
T ss_pred eCchhHHHHHHH---HHHHHHCCCEEEE
Confidence 456778888886 5689999987643
No 136
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=25.31 E-value=17 Score=22.45 Aligned_cols=20 Identities=25% Similarity=0.468 Sum_probs=16.4
Q ss_pred hccCCchHHHHHHHHHHHHHH
Q 034652 56 MYFPTCPQEALLLQQDIKEAK 76 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk 76 (88)
+||..||. ...|+++|++|=
T Consensus 49 lt~~~cp~-~~~l~~~i~~al 68 (103)
T 3cq1_A 49 LTTPGCPL-HDSLGEAVRQAL 68 (103)
T ss_dssp CSSSSCCS-SCHHHHHHHHHH
T ss_pred ECCCCCcH-HHHHHHHHHHHH
Confidence 57889996 888999988874
No 137
>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}
Probab=25.25 E-value=53 Score=20.23 Aligned_cols=18 Identities=17% Similarity=0.359 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
++++++.+.|+++|+++.
T Consensus 98 ~dv~~~~~~l~~~G~~~~ 115 (146)
T 3ct8_A 98 EKVDELTQKLKERGDPIL 115 (146)
T ss_dssp HHHHHHHHHHHHHTCCBC
T ss_pred HHHHHHHHHHHHcCCccc
Confidence 378888899999998764
No 138
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=25.19 E-value=79 Score=20.89 Aligned_cols=31 Identities=16% Similarity=0.154 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhhhccCCchHHHHHHHHHH
Q 034652 42 SLGCYGLLMVGIGLMYFPTCPQEALLLQQDI 72 (88)
Q Consensus 42 ~fG~Ysl~~vgy~v~tFnDcpeA~~eL~~eI 72 (88)
.-=+||++.+.|-++|-.+.+....+..+++
T Consensus 201 ~~Di~slG~il~~l~~~~~~~~~~~~~~~~~ 231 (284)
T 2a19_B 201 EVDLYALGLILAELLHVCDTAFETSKFFTDL 231 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCSSHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHhcCCcchhHHHHHHHh
Confidence 3467999999999998777665554444433
No 139
>2oqm_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.83A {Shewanella denitrificans} SCOP: a.213.1.3
Probab=25.10 E-value=40 Score=23.99 Aligned_cols=27 Identities=22% Similarity=0.122 Sum_probs=24.6
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~k 82 (88)
-.|+|-|.-..||++.|+++.+.|++-
T Consensus 95 p~~~d~ettfaeL~~rI~~tia~L~~~ 121 (192)
T 2oqm_A 95 PKHDDSETTLAELRQRIASVLTYLEGF 121 (192)
T ss_dssp CCCCCCCCSHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 678999999999999999999999863
No 140
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=25.06 E-value=38 Score=22.90 Aligned_cols=25 Identities=36% Similarity=0.635 Sum_probs=18.3
Q ss_pred hhccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 55 LMYFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 55 v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+++.+.||-.. .||+.|+++|++++
T Consensus 174 ly~~~~Cp~C~--------~a~~~L~~~~i~~~ 198 (241)
T 1nm3_A 174 IFTKPGCPFCA--------KAKQLLHDKGLSFE 198 (241)
T ss_dssp EEECSSCHHHH--------HHHHHHHHHTCCCE
T ss_pred EEECCCChHHH--------HHHHHHHHcCCceE
Confidence 56677888765 67888888888753
No 141
>3r8s_S 50S ribosomal protein L22; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_Q 1p86_Q 1vs8_S 1vs6_S 2aw4_S 2awb_S 1vt2_S 2i2v_S 2j28_S 2i2t_S* 2qao_S* 2qba_S* 2qbc_S* 2qbe_S 2qbg_S 2qbi_S* 2qbk_S* 2qov_S 2qox_S 2qoz_S* ...
Probab=25.02 E-value=83 Score=20.00 Aligned_cols=27 Identities=22% Similarity=0.429 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhc-CCccCC
Q 034652 62 PQEALLLQQDIKEAKEYLERK-GIDVSE 88 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL~~k-G~~~d~ 88 (88)
..+++.+.+-++.|.+.-..+ |+|.|+
T Consensus 41 kkaa~~v~k~L~sA~aNAe~~~gld~d~ 68 (110)
T 3r8s_S 41 KKAAVLVKKVLESAIANAEHNDGADIDD 68 (110)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSSCCTTS
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCCChhh
Confidence 356777888899999888777 999885
No 142
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=24.93 E-value=59 Score=23.59 Aligned_cols=28 Identities=18% Similarity=0.215 Sum_probs=23.1
Q ss_pred HHHHHHhhhccCCchHHHHHHHHHHHHH
Q 034652 48 LLMVGIGLMYFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 48 l~~vgy~v~tFnDcpeA~~eL~~eI~eA 75 (88)
..++.|.+...-..||..+.|++||+++
T Consensus 289 a~~l~~~l~~L~~~P~~~~kl~~Ei~~~ 316 (485)
T 3nxu_A 289 SSVLSFIMYELATHPDVQQKLQEEIDAV 316 (485)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 3467777777778899999999999875
No 143
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=24.81 E-value=45 Score=24.19 Aligned_cols=19 Identities=21% Similarity=0.008 Sum_probs=16.0
Q ss_pred ccCCchHHHHHHHHHHHHH
Q 034652 57 YFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eA 75 (88)
...||||.+++|.+++++.
T Consensus 229 ~h~~~~e~a~~l~~~l~~~ 247 (278)
T 3fdj_A 229 CHVENEALADKIADMIKQA 247 (278)
T ss_dssp EESSCHHHHHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHHHHh
Confidence 4568999999999999864
No 144
>2hzq_A Apolipoprotein D, APO-D, APOD; lipocalin, beta barrel, bilin-binding protein, transport protein; HET: STR; 1.80A {Homo sapiens} PDB: 2hzr_A
Probab=24.72 E-value=60 Score=20.98 Aligned_cols=18 Identities=28% Similarity=0.451 Sum_probs=14.2
Q ss_pred HHHHHHHHHHhcCCccCC
Q 034652 71 DIKEAKEYLERKGIDVSE 88 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~d~ 88 (88)
.++++++.+++.|++.++
T Consensus 137 ~~~~~~~~~~~~G~~~~~ 154 (174)
T 2hzq_A 137 TVDSLKNILTSNNIDVKK 154 (174)
T ss_dssp HHHHHHHHHHHTTCCCTT
T ss_pred HHHHHHHHHHHcCCCHHH
Confidence 357778889999998764
No 145
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=24.71 E-value=46 Score=20.78 Aligned_cols=17 Identities=18% Similarity=0.268 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHhcCCcc
Q 034652 70 QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~ 86 (88)
++++++.+.|+++|+++
T Consensus 79 ~dvd~~~~~l~~~G~~i 95 (148)
T 3rhe_A 79 EMVDEIHRQWSDKEISI 95 (148)
T ss_dssp HHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHhCCCEE
Confidence 47888899999999876
No 146
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=24.69 E-value=68 Score=21.69 Aligned_cols=22 Identities=18% Similarity=0.309 Sum_probs=15.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHh
Q 034652 60 TCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 60 DcpeA~~eL~~eI~eAk~dL~~ 81 (88)
+.+|+++++.+++++.-+++++
T Consensus 110 g~~~~A~~~~~~~~~~~~~~~~ 131 (256)
T 2r7a_A 110 QVPEQGDALVTQINQRLERVQQ 131 (256)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 5788888888777766665554
No 147
>2asy_A Protein YDHR precursor; dimeric APHA+beta barrel, homodimer, structural genomics, ontario centre for structural proteomics, OCSP; NMR {Escherichia coli} SCOP: d.58.4.12
Probab=24.58 E-value=48 Score=22.24 Aligned_cols=29 Identities=17% Similarity=0.320 Sum_probs=22.9
Q ss_pred HhhhccCCchHHHHHHHHHHHHHHHHHHhcCCc
Q 034652 53 IGLMYFPTCPQEALLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 53 y~v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~ 85 (88)
-||.-|+|+..|-+=+.+. ++.|++.|++
T Consensus 73 GGIYLFe~~aaAEaYl~~h----~aRl~~~Gi~ 101 (123)
T 2asy_A 73 GGIYLFTDEKSALAYLEKH----TARLKNLGVE 101 (123)
T ss_dssp EEEEEESCHHHHHHHHHHH----HHHHHHHSSS
T ss_pred ceEEEeCCHHHHHHHHHHH----HHHHHHcCCc
Confidence 3778899998888777775 6778888875
No 148
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=24.47 E-value=75 Score=19.75 Aligned_cols=24 Identities=13% Similarity=-0.014 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccC
Q 034652 64 EALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 64 A~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
..++.++.++++++.++..|++++
T Consensus 72 ~~~~~~~~l~~~~~~~~~~g~~~~ 95 (170)
T 2dum_A 72 LKEEASRKLQEKAEEVKRAFRAKN 95 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHHHHcCCcee
Confidence 344556667788888888888764
No 149
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=24.46 E-value=90 Score=18.59 Aligned_cols=25 Identities=12% Similarity=-0.029 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 62 PQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
++..++-++..+++++.+++.|+++
T Consensus 62 ~~~~~~~~~~l~~~~~~~~~~g~~~ 86 (147)
T 3hgm_A 62 DALKDYATEIAVQAKTRATELGVPA 86 (147)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3344566677888899999999876
No 150
>2zjr_V 50S ribosomal protein L29; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: a.2.2.1 PDB: 1nwx_W* 1nwy_W* 1sm1_W* 1xbp_W* 2aar_W 2d3o_W 2zjp_V* 2zjq_V 1nkw_W 3cf5_V* 3dll_V* 3pio_V* 3pip_V* 1pnu_W 1pny_W 1vor_Y 1vou_Y 1vow_Y 1voy_Y 1vp0_Y
Probab=24.44 E-value=41 Score=19.80 Aligned_cols=17 Identities=24% Similarity=0.220 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHh
Q 034652 65 ALLLQQDIKEAKEYLER 81 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~~ 81 (88)
.+||++++.+.|++|-.
T Consensus 11 ~~EL~~~l~elk~ELf~ 27 (67)
T 2zjr_V 11 ATDFAKEIDARKKELME 27 (67)
T ss_dssp HHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47889999998888743
No 151
>2kuf_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=24.44 E-value=41 Score=21.31 Aligned_cols=17 Identities=18% Similarity=-0.040 Sum_probs=13.9
Q ss_pred HHHHHHHHHHhcCCccC
Q 034652 71 DIKEAKEYLERKGIDVS 87 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~d 87 (88)
..++|++.|++.|+++.
T Consensus 83 ~~~~A~~~L~~~Gl~v~ 99 (139)
T 2kuf_A 83 FWVDAEPRLRALGWTGM 99 (139)
T ss_dssp CHHHHHHHHHHHTCCSC
T ss_pred CHHHHHHHHHHcCCcee
Confidence 45789999999999863
No 152
>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}
Probab=24.37 E-value=30 Score=21.35 Aligned_cols=16 Identities=44% Similarity=0.607 Sum_probs=13.6
Q ss_pred HHHHHHHHHHhcCCcc
Q 034652 71 DIKEAKEYLERKGIDV 86 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~ 86 (88)
+|+++.+.|+++|+++
T Consensus 114 di~~~~~~l~~~G~~~ 129 (159)
T 3gm5_A 114 DMDRKVEELYRKGMKV 129 (159)
T ss_dssp CHHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHCCCcE
Confidence 5788889999999876
No 153
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=24.33 E-value=28 Score=21.42 Aligned_cols=18 Identities=11% Similarity=0.182 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
++++++.+.|+++|+++.
T Consensus 99 ~dl~~~~~~l~~~G~~~~ 116 (147)
T 3zw5_A 99 VPLEEMIQHLKACDVPIE 116 (147)
T ss_dssp SCHHHHHHHHHHTTCCCC
T ss_pred cCHHHHHHHHHHcCCcee
Confidence 378888899999999874
No 154
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.18 E-value=63 Score=22.90 Aligned_cols=33 Identities=15% Similarity=0.318 Sum_probs=22.0
Q ss_pred hhhccCCchHHHHHHH---------------HHHHHHHHHHHhcCCcc
Q 034652 54 GLMYFPTCPQEALLLQ---------------QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 54 ~v~tFnDcpeA~~eL~---------------~eI~eAk~dL~~kG~~~ 86 (88)
++.+|.+-....+++. +|++++=+.|+++|+++
T Consensus 110 avVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~~G~~v 157 (225)
T 2pju_A 110 GVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKANGTEA 157 (225)
T ss_dssp EEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHHTTCCE
T ss_pred EEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCCE
Confidence 5566666555555443 46777778888899875
No 155
>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}
Probab=24.17 E-value=39 Score=21.15 Aligned_cols=17 Identities=18% Similarity=0.397 Sum_probs=14.0
Q ss_pred HHHHHHHHHHhcCCccC
Q 034652 71 DIKEAKEYLERKGIDVS 87 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~d 87 (88)
+|+++.+.|+++|+++.
T Consensus 89 Did~~~~~l~~~G~~~~ 105 (161)
T 3oa4_A 89 SIEERIQEVKENGVQMI 105 (161)
T ss_dssp CHHHHHHHHHHTTCCBS
T ss_pred CHHHHHHHHHHCCCEec
Confidence 47888889999999863
No 156
>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2
Probab=24.08 E-value=37 Score=20.45 Aligned_cols=17 Identities=24% Similarity=0.450 Sum_probs=13.4
Q ss_pred HHHHHHHHHHhcCCccC
Q 034652 71 DIKEAKEYLERKGIDVS 87 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~d 87 (88)
+++++.+.|+++|+++.
T Consensus 78 d~~~~~~~l~~~G~~~~ 94 (139)
T 1r9c_A 78 DFDRYAERVGKLGLDMR 94 (139)
T ss_dssp GHHHHHHHHHHHTCCBC
T ss_pred HHHHHHHHHHHCCCccc
Confidence 67788888888888764
No 157
>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}
Probab=24.06 E-value=40 Score=19.74 Aligned_cols=17 Identities=41% Similarity=0.567 Sum_probs=13.6
Q ss_pred HHHHHHHHHHhcCCccC
Q 034652 71 DIKEAKEYLERKGIDVS 87 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~d 87 (88)
+++++.+.|+++|+++.
T Consensus 82 d~~~~~~~l~~~G~~~~ 98 (126)
T 2qqz_A 82 KIDEFKQELIKQGIEVI 98 (126)
T ss_dssp THHHHHHHHHHTTCCCE
T ss_pred CHHHHHHHHHHcCCCcc
Confidence 57788888999998763
No 158
>2kue_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=23.95 E-value=45 Score=21.18 Aligned_cols=16 Identities=25% Similarity=0.229 Sum_probs=13.8
Q ss_pred HHHHHHHHHHhcCCcc
Q 034652 71 DIKEAKEYLERKGIDV 86 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~ 86 (88)
..++|++.|+++|+++
T Consensus 17 ~~~~A~~~L~~~gl~~ 32 (138)
T 2kue_A 17 TYAEAVKKLTAAGFGR 32 (138)
T ss_dssp CHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHCCCcc
Confidence 4679999999999976
No 159
>2i7u_A Four-alpha-helix bundle; HOMO dimer, anesthetic binding, de novo protein/ligand binding protein complex; NMR {Synthetic} PDB: 2jst_A
Probab=23.88 E-value=55 Score=19.19 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=14.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHh
Q 034652 60 TCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 60 DcpeA~~eL~~eI~eAk~dL~~ 81 (88)
-|+||++.-.+-.+-|.+.|++
T Consensus 40 lceeaakkaeelfklaeerlkk 61 (62)
T 2i7u_A 40 LCEEAAKKAEELFKLAEERLKK 61 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 3788877666666666666653
No 160
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=23.81 E-value=74 Score=21.80 Aligned_cols=22 Identities=9% Similarity=0.170 Sum_probs=17.5
Q ss_pred chHHHHHHHHHHHHHHHHHHhc
Q 034652 61 CPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 61 cpeA~~eL~~eI~eAk~dL~~k 82 (88)
-|.--+.+++||+.|+.+|++.
T Consensus 52 ~~~ql~~v~kdi~~a~~eL~~m 73 (141)
T 3okq_A 52 AKKKLETVSKDLENAQADVLKL 73 (141)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 3566778889999999999763
No 161
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=23.78 E-value=81 Score=19.84 Aligned_cols=28 Identities=18% Similarity=0.171 Sum_probs=20.2
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhcCC
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERKGI 84 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~kG~ 84 (88)
+....||...++ ..++++..+.++.+|+
T Consensus 66 F~a~~C~~C~~~-~~~l~~l~~~~~~~~~ 93 (183)
T 3lwa_A 66 AWGQWCAPCRSE-SDDLQIIHEELQAAGN 93 (183)
T ss_dssp EECTTCHHHHHH-HHHHHHHHHHHHHCC-
T ss_pred EECCcCHhHHHH-HHHHHHHHHHHHhcCC
Confidence 345779986554 4578888899999987
No 162
>2d16_A Hypothetical protein PH1918; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.65A {Pyrococcus horikoshii}
Probab=23.30 E-value=50 Score=23.23 Aligned_cols=19 Identities=26% Similarity=0.525 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHhcCCccC
Q 034652 69 QQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 69 ~~eI~eAk~dL~~kG~~~d 87 (88)
.++++|-|+.||+-|.+.|
T Consensus 144 e~d~~~Rk~lLr~iGYK~~ 162 (162)
T 2d16_A 144 DEQKKERRELVEKIGYKID 162 (162)
T ss_dssp HHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHhCcCCC
Confidence 4689999999999999875
No 163
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=23.28 E-value=87 Score=22.69 Aligned_cols=29 Identities=10% Similarity=0.092 Sum_probs=23.0
Q ss_pred HHHHHHhhhccCCchHHHHHHHHHHHHHH
Q 034652 48 LLMVGIGLMYFPTCPQEALLLQQDIKEAK 76 (88)
Q Consensus 48 l~~vgy~v~tFnDcpeA~~eL~~eI~eAk 76 (88)
..++.|.++-.-..||..+.|++||+++-
T Consensus 274 a~tl~~~l~~L~~~P~~~~kl~~Ei~~v~ 302 (491)
T 3dax_A 274 IPATFWSLFQMIRNPEAMKAATEEVKRTL 302 (491)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence 34566777777778999999999999874
No 164
>2kvu_A MKL/myocardin-like protein 1; SAP motif, DNA/RNA binding, structural genomics, northeast structural genomics consortium (NESG), PSI-2; NMR {Homo sapiens} PDB: 2kw9_A
Probab=23.20 E-value=54 Score=20.17 Aligned_cols=16 Identities=31% Similarity=0.441 Sum_probs=13.0
Q ss_pred HHHHHHHHHhcCCccC
Q 034652 72 IKEAKEYLERKGIDVS 87 (88)
Q Consensus 72 I~eAk~dL~~kG~~~d 87 (88)
+.|=|+.|++||+++.
T Consensus 31 VaeLK~eLk~RGL~~s 46 (75)
T 2kvu_A 31 VAELKQELKLRSLPVS 46 (75)
T ss_dssp HHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHcCCCCC
Confidence 6677889999998763
No 165
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=23.13 E-value=67 Score=23.12 Aligned_cols=27 Identities=19% Similarity=0.111 Sum_probs=22.0
Q ss_pred HHHHHhhhccCCchHHHHHHHHHHHHH
Q 034652 49 LMVGIGLMYFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 49 ~~vgy~v~tFnDcpeA~~eL~~eI~eA 75 (88)
.++.|.+...-..||..+.|++||+++
T Consensus 301 ~~l~~~l~~L~~~P~~q~kl~~Ei~~v 327 (482)
T 3k9v_A 301 NSLMWILYNLSRNPQAQRRLLQEVQSV 327 (482)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 356677777777899999999999876
No 166
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=23.11 E-value=49 Score=24.17 Aligned_cols=27 Identities=7% Similarity=-0.009 Sum_probs=21.5
Q ss_pred HHHHHhhhccCCchHHHHHHHHHHHHH
Q 034652 49 LMVGIGLMYFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 49 ~~vgy~v~tFnDcpeA~~eL~~eI~eA 75 (88)
.++.|.+...-..||..+.|++||+++
T Consensus 263 ~~l~~~l~~L~~~P~~~~~l~~Ei~~~ 289 (455)
T 2cib_A 263 GTASWTLIELMRHRDAYAAVIDELDEL 289 (455)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 456666666667899999999999876
No 167
>3j21_S 50S ribosomal protein L22P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.06 E-value=89 Score=21.30 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCccCC
Q 034652 62 PQEALLLQQDIKEAKEYLERKGIDVSE 88 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL~~kG~~~d~ 88 (88)
..+++.+.+=++.|.+.-..+|+|.|+
T Consensus 85 kKaa~~ilklL~sA~aNAe~kgld~d~ 111 (155)
T 3j21_S 85 VKVAKAIKKVLLNVKNNAVQKGLDPDK 111 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhh
Confidence 357777888889888888889999885
No 168
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=23.02 E-value=48 Score=21.68 Aligned_cols=25 Identities=24% Similarity=0.320 Sum_probs=18.2
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
.|.+.|+ ...|.++=+.|+++|++|
T Consensus 115 ~f~~~~~-----l~~i~~~Y~~Lk~~G~~F 139 (140)
T 3ldz_A 115 EFKNDPQ-----LSLISAMIKNLKEQGVTF 139 (140)
T ss_dssp HHTTCGG-----GTHHHHHHHHHHHTTCCC
T ss_pred HhCCCCC-----chHHHHHHHHHHHccCcC
Confidence 4555554 235888889999999987
No 169
>3hm6_X Plexin-B1; structural genomics consortium, SGC, membrane, transmembrane receptor, cell membrane, glycoprotein, phosphoprotein; 2.40A {Homo sapiens} PDB: 3sua_D* 3su8_X*
Probab=22.83 E-value=22 Score=29.86 Aligned_cols=28 Identities=21% Similarity=0.300 Sum_probs=2.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 59 PTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 59 nDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
+.|.+|..|||-|+.+-.+||..-|+.+
T Consensus 47 ~ecK~aFaELQtdm~dlt~dl~~~giPf 74 (644)
T 3hm6_X 47 DRCKKEFTDLMTEMTDLTSDLLGSGIPF 74 (644)
T ss_dssp -------------------------CCB
T ss_pred HHHHHHHHHHccchhhhhhccccCCCCc
Confidence 5799999999999999999998778876
No 170
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=22.83 E-value=28 Score=26.21 Aligned_cols=31 Identities=13% Similarity=0.262 Sum_probs=15.9
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
+|-|-++-..||+++|+|.|..-+..+++++
T Consensus 13 ~~~~fe~~~~~~~~~~~~~~~~~~~~~~~~~ 43 (327)
T 2f9i_A 13 SMLDFEKPLFEIRNKIESLKESQDKNDVDLQ 43 (327)
T ss_dssp CCCGGGHHHHHHHHHHHCC-----------C
T ss_pred CCCchhhHHHHHHHHHHHHHHhhhcCCCCHH
Confidence 3557788888999999998886655566654
No 171
>1exn_A 5'-exonuclease, 5'-nuclease; hydrolase; 2.50A {Enterobacteria phage T5} SCOP: a.60.7.1 c.120.1.2 PDB: 1ut5_A 1ut8_A 1xo1_A
Probab=22.74 E-value=77 Score=23.52 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=20.0
Q ss_pred HHHHHHHHH-HHHHHHHHHh--cCCcc
Q 034652 63 QEALLLQQD-IKEAKEYLER--KGIDV 86 (88)
Q Consensus 63 eA~~eL~~e-I~eAk~dL~~--kG~~~ 86 (88)
++.++|.+| +...|+-|+. .|+.+
T Consensus 94 ~~~e~L~~q~~~~ikell~~~~~gip~ 120 (290)
T 1exn_A 94 EEEKALDEQFFEYLKDAFELCKTTFPT 120 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSCE
T ss_pred ccchhHHHhhHHHHHHHHHhhCCCCcE
Confidence 334889999 9999999999 99864
No 172
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=22.63 E-value=92 Score=22.82 Aligned_cols=38 Identities=13% Similarity=0.202 Sum_probs=32.0
Q ss_pred HHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHhcCC
Q 034652 47 GLLMVGIGLMYFPTCPQEALLLQQDIKEAKEYLERKGI 84 (88)
Q Consensus 47 sl~~vgy~v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~ 84 (88)
.+..-||.|.-++--||+.+.++++|++.-+.|.++|+
T Consensus 24 ~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~ 61 (319)
T 2dpo_A 24 LFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGS 61 (319)
T ss_dssp HHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCc
Confidence 34455889999999999999999999998888888874
No 173
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=22.58 E-value=84 Score=21.13 Aligned_cols=14 Identities=14% Similarity=0.121 Sum_probs=11.8
Q ss_pred HHHHHHHHHHhhhc
Q 034652 44 GCYGLLMVGIGLMY 57 (88)
Q Consensus 44 G~Ysl~~vgy~v~t 57 (88)
=+||++.+.|-++|
T Consensus 199 Di~slG~~l~~l~~ 212 (295)
T 3ugc_A 199 DVWSFGVVLYELFT 212 (295)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 47888888888888
No 174
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=22.44 E-value=83 Score=19.80 Aligned_cols=26 Identities=19% Similarity=0.221 Sum_probs=19.8
Q ss_pred CCchHHH-HHHHHHHHHHHHHHHhcCCc
Q 034652 59 PTCPQEA-LLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 59 nDcpeA~-~eL~~eI~eAk~dL~~kG~~ 85 (88)
..||-.- +|+. ++++..+.++++|++
T Consensus 46 ~~c~~C~~~e~~-~l~~~~~~~~~~~v~ 72 (162)
T 1tp9_A 46 AFTPTCSLKHVP-GFIEKAGELKSKGVT 72 (162)
T ss_dssp TTCHHHHHTHHH-HHHHHHHHHHHTTCC
T ss_pred CCCCCCCHHHHH-HHHHHHHHHHHCCCC
Confidence 3688777 6764 577788888889987
No 175
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=22.35 E-value=52 Score=24.48 Aligned_cols=20 Identities=10% Similarity=0.187 Sum_probs=16.2
Q ss_pred hccCCchHHHHHHHHHHHHH
Q 034652 56 MYFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eA 75 (88)
....||||.+++|.++|+|.
T Consensus 265 I~h~~~~e~a~~l~~~l~~~ 284 (315)
T 3fys_A 265 VIHANREEEAAKIIEELSAK 284 (315)
T ss_dssp EEESSCHHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHh
Confidence 34568999999999999764
No 176
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=22.34 E-value=74 Score=22.24 Aligned_cols=36 Identities=8% Similarity=0.027 Sum_probs=29.1
Q ss_pred HHhhhccCCchHHHHHHHHHHHHHHHHH-HhcCCccC
Q 034652 52 GIGLMYFPTCPQEALLLQQDIKEAKEYL-ERKGIDVS 87 (88)
Q Consensus 52 gy~v~tFnDcpeA~~eL~~eI~eAk~dL-~~kG~~~d 87 (88)
-+|+.+..+.|.|-+-+..+++.-..++ ++-|++.|
T Consensus 235 DFG~a~~~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~ 271 (282)
T 1zar_A 235 DFPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKD 271 (282)
T ss_dssp CCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred ECCCCeECCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3567777888999888999999999999 66677654
No 177
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=22.26 E-value=57 Score=20.94 Aligned_cols=29 Identities=3% Similarity=0.068 Sum_probs=18.9
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
....||-.-+|+ .++++..+.++++|+.+
T Consensus 57 ~atwC~~C~~~~-~~l~~l~~~~~~~~v~v 85 (185)
T 2gs3_A 57 VASQGGKTEVNY-TQLVDLHARYAECGLRI 85 (185)
T ss_dssp ECSSSTTHHHHH-HHHHHHHHHHGGGTEEE
T ss_pred ecCCCCchHHHH-HHHHHHHHHhhcCCeEE
Confidence 345688665554 46777777777777653
No 178
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=22.20 E-value=1e+02 Score=22.06 Aligned_cols=28 Identities=7% Similarity=0.055 Sum_probs=23.4
Q ss_pred HHHHHHhhhccCCchHHHHHHHHHHHHH
Q 034652 48 LLMVGIGLMYFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 48 l~~vgy~v~tFnDcpeA~~eL~~eI~eA 75 (88)
..++.|.+...-..||..+.|++||+++
T Consensus 227 ~~~l~~~l~~L~~~P~~~~~l~~E~~~~ 254 (389)
T 1n97_A 227 ASALTWSFLLLSHRPDWQKRVAESEEAA 254 (389)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 3467777888888999999999999876
No 179
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=22.18 E-value=55 Score=18.90 Aligned_cols=13 Identities=23% Similarity=0.698 Sum_probs=9.0
Q ss_pred HHHHHHHHhcCCc
Q 034652 73 KEAKEYLERKGID 85 (88)
Q Consensus 73 ~eAk~dL~~kG~~ 85 (88)
..=+++|++||++
T Consensus 31 ~~K~~FL~sKGLt 43 (54)
T 3ff5_A 31 ATRRAFLKKKGLT 43 (54)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 3445788888875
No 180
>2kud_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=22.16 E-value=37 Score=21.63 Aligned_cols=16 Identities=19% Similarity=0.403 Sum_probs=13.6
Q ss_pred HHHHHHHHHHhcCCcc
Q 034652 71 DIKEAKEYLERKGIDV 86 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~ 86 (88)
..++|++.|+++|+++
T Consensus 18 ~~~~A~~~L~~~gl~~ 33 (140)
T 2kud_A 18 SSADAIATLQNRGFKI 33 (140)
T ss_dssp BHHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHHHCCCeE
Confidence 4689999999999875
No 181
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=22.03 E-value=55 Score=23.80 Aligned_cols=19 Identities=16% Similarity=0.113 Sum_probs=15.8
Q ss_pred ccCCchHHHHHHHHHHHHH
Q 034652 57 YFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eA 75 (88)
...||||.+++|.+++++.
T Consensus 213 ~h~~~~e~a~~l~~~l~~~ 231 (277)
T 3egl_A 213 GQNEAREAAXQLEELLRNA 231 (277)
T ss_dssp EEESCHHHHHHHHHHHHHH
T ss_pred EeCCCHHHHHHHHHHHHHh
Confidence 4568999999999998764
No 182
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=21.97 E-value=82 Score=21.17 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=17.5
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
...=+++++++++.+++++.-+++++
T Consensus 102 g~~lg~~~~A~~~~~~~~~~~~~~~~ 127 (245)
T 1n2z_A 102 APWSPQPDKAEQAAQSLLDQYAQLKA 127 (245)
T ss_dssp GGGCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 34445788888888777666555554
No 183
>2c0s_A Conserved domain protein; transferase, phosphatase, phosphorylation, sporulation, antithetical, negative regulator, spine; NMR {Bacillus anthracis} SCOP: a.30.7.1
Probab=21.96 E-value=75 Score=18.67 Aligned_cols=17 Identities=24% Similarity=0.116 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHhc
Q 034652 66 LLLQQDIKEAKEYLERK 82 (88)
Q Consensus 66 ~eL~~eI~eAk~dL~~k 82 (88)
+.|.++|++.|+.|-+.
T Consensus 4 ~~L~~~IE~kR~eL~~l 20 (64)
T 2c0s_A 4 TKLNDRIEAKKKELIYL 20 (64)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57899999999988543
No 184
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=21.81 E-value=96 Score=19.68 Aligned_cols=14 Identities=21% Similarity=0.344 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHh
Q 034652 68 LQQDIKEAKEYLER 81 (88)
Q Consensus 68 L~~eI~eAk~dL~~ 81 (88)
=.++.++|++||+.
T Consensus 60 ~~~~L~qAraDL~~ 73 (90)
T 4b6x_A 60 TSQQLRHARADLAD 73 (90)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34556667777654
No 185
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=21.81 E-value=38 Score=19.51 Aligned_cols=17 Identities=12% Similarity=0.403 Sum_probs=13.5
Q ss_pred HHHHHHHHHHhcCCccC
Q 034652 71 DIKEAKEYLERKGIDVS 87 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~d 87 (88)
+++++.+.|+++|+++.
T Consensus 74 d~~~~~~~l~~~G~~~~ 90 (119)
T 2pjs_A 74 NFDEVHARILKAGLPIE 90 (119)
T ss_dssp CHHHHHHHHHHTTCCCS
T ss_pred CHHHHHHHHHHCCCccc
Confidence 57788888889998763
No 186
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=21.80 E-value=61 Score=21.62 Aligned_cols=21 Identities=33% Similarity=0.450 Sum_probs=17.4
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcCCc
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~kG~~ 85 (88)
.|.+.|. |.++=+.||++|+.
T Consensus 127 ~f~~~p~--------i~~~Y~~Lk~~Giv 147 (149)
T 3g2s_A 127 GLPEEVK--------IAEAYQMLKKQGIV 147 (149)
T ss_dssp HCTTCHH--------HHHHHHHHHHTTCC
T ss_pred HhCCCch--------HHHHHHHHHHCcCc
Confidence 4777773 89999999999985
No 187
>1qwd_A Outer membrane lipoprotein BLC; bacterial lipocalin, lipid binding protein; 1.75A {Escherichia coli} SCOP: b.60.1.1 PDB: 2aco_A* 3mbt_A
Probab=21.68 E-value=57 Score=21.72 Aligned_cols=18 Identities=33% Similarity=0.379 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHhcCCccC
Q 034652 70 QDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~d 87 (88)
+.++++++.+++.|++.+
T Consensus 150 ~~~~~~~~~~~~~G~d~~ 167 (177)
T 1qwd_A 150 EVKQEMLAVATREGFDVS 167 (177)
T ss_dssp HHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHcCCCHH
Confidence 356777888899999876
No 188
>3g9q_A Ferrichrome-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.60A {Bacillus subtilis subsp} PDB: 3hxp_A
Probab=21.66 E-value=83 Score=21.53 Aligned_cols=22 Identities=5% Similarity=-0.135 Sum_probs=15.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHh
Q 034652 60 TCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 60 DcpeA~~eL~~eI~eAk~dL~~ 81 (88)
+++|.++++.+++++.-+++++
T Consensus 116 g~e~~A~~li~~~~~~~~~i~~ 137 (279)
T 3g9q_A 116 GTEDKAEKWLAKWDKKVAAAKT 137 (279)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 4788888887776665555544
No 189
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=21.59 E-value=73 Score=20.47 Aligned_cols=21 Identities=14% Similarity=0.412 Sum_probs=11.8
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCCc
Q 034652 61 CPQEALLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 61 cpeA~~eL~~eI~eAk~dL~~kG~~ 85 (88)
||....+ +.+.++.++++|.+
T Consensus 48 Cp~~~~~----l~~l~~~~~~~~~~ 68 (170)
T 4hde_A 48 CPPMTAN----MAKLQKMAKEEKLD 68 (170)
T ss_dssp HHHHHHH----HHHHHHHHHHTTCC
T ss_pred ccHHHHH----HHHHHHhhhccccc
Confidence 5554444 45556666666644
No 190
>2zkr_v 60S ribosomal protein L35; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=21.52 E-value=60 Score=21.59 Aligned_cols=17 Identities=18% Similarity=0.157 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHh
Q 034652 65 ALLLQQDIKEAKEYLER 81 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~~ 81 (88)
.+||++++.|.|++|-.
T Consensus 14 ~eEL~~~L~eLK~ELf~ 30 (123)
T 2zkr_v 14 KEELLKQLDDLKVELSQ 30 (123)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47899999999998753
No 191
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=21.48 E-value=87 Score=19.88 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=17.3
Q ss_pred ccCCchHHHHHHHHHHHHHHHHH
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYL 79 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL 79 (88)
+|.+ |+++..-.+.+++|-++|
T Consensus 90 nF~s-e~eA~~F~~~v~~al~~l 111 (112)
T 1evh_A 90 NFGS-KEDANVFASAMMHALEVL 111 (112)
T ss_dssp EESS-HHHHHHHHHHHHHHHHHH
T ss_pred ecCC-HHHHHHHHHHHHHHHHhc
Confidence 5666 677777789999998876
No 192
>3u5e_h 60S ribosomal protein L35-A, 60S ribosomal protein L33-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 1s1i_X 2wwa_N 2ww9_N 3izc_c 3izs_c 2wwb_N 3o5h_c 3o58_c 3u5i_h 4b6a_h
Probab=21.46 E-value=60 Score=21.48 Aligned_cols=17 Identities=18% Similarity=0.175 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHh
Q 034652 65 ALLLQQDIKEAKEYLER 81 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~~ 81 (88)
.+||++++.|.|++|-.
T Consensus 14 ~eEL~~~L~eLK~ELf~ 30 (120)
T 3u5e_h 14 KEQLASQLVDLKKELAE 30 (120)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47999999999998854
No 193
>1zrj_A E1B-55KDA-associated protein 5 isoform C; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=21.46 E-value=67 Score=18.06 Aligned_cols=15 Identities=40% Similarity=0.824 Sum_probs=12.2
Q ss_pred HHHHHHHHHhcCCcc
Q 034652 72 IKEAKEYLERKGIDV 86 (88)
Q Consensus 72 I~eAk~dL~~kG~~~ 86 (88)
+.|=|+.|++||++.
T Consensus 15 V~eLK~eLk~RgL~~ 29 (50)
T 1zrj_A 15 VNELREELQRRGLDT 29 (50)
T ss_dssp HHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHcCCCC
Confidence 567788999999875
No 194
>3mfn_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 2.02A {Dyadobacter fermentans}
Probab=21.42 E-value=62 Score=22.55 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCc
Q 034652 62 PQEALLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL~~kG~~ 85 (88)
.|+.+|-..-.+.||+-|++||.+
T Consensus 32 ~~~~~eArryLdnAkeIL~eka~K 55 (157)
T 3mfn_A 32 QEAVIEAKRYLNNAKDILRDKGGK 55 (157)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHSCE
T ss_pred hhHHHHHHHHHHHHHHHHHHhccc
Confidence 567888888899999999999976
No 195
>2l10_A Talin-1; helical bundle, cytoskeleton, focal adhesion, structu protein; NMR {Mus musculus}
Probab=21.37 E-value=51 Score=22.70 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=20.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHh
Q 034652 57 YFPTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
.|+-.++-|.|+|.|+..|.+.|-.
T Consensus 28 ~~~~~~~~~~~~Q~eL~~aA~~Ln~ 52 (158)
T 2l10_A 28 LLPPSTGTFQEAQSRLNEAAAGLNQ 52 (158)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCccHHHHHHHHHHHHHHHHH
Confidence 3777788999999999998887753
No 196
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=21.35 E-value=86 Score=21.14 Aligned_cols=23 Identities=17% Similarity=0.180 Sum_probs=15.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHh
Q 034652 59 PTCPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 59 nDcpeA~~eL~~eI~eAk~dL~~ 81 (88)
=+.+|+++++.+++++.-+++++
T Consensus 107 ~g~~~~A~~~~~~~~~~~~~~~~ 129 (260)
T 2q8p_A 107 FNRKAQAKELNDHLNSVKQKIEN 129 (260)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hCChHHHHHHHHHHHHHHHHHHH
Confidence 35788888887776665555544
No 197
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=21.28 E-value=23 Score=20.96 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=12.9
Q ss_pred HHHHHHHHHHhcCCcc
Q 034652 71 DIKEAKEYLERKGIDV 86 (88)
Q Consensus 71 eI~eAk~dL~~kG~~~ 86 (88)
+++++.+.|+++|+++
T Consensus 87 di~~~~~~l~~~G~~~ 102 (133)
T 3hdp_A 87 DIQKSIEEMSQIGYTL 102 (133)
T ss_dssp CHHHHHHHHTTTTEEE
T ss_pred CHHHHHHHHHHcCCcc
Confidence 4777888899999875
No 198
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=21.24 E-value=57 Score=23.52 Aligned_cols=28 Identities=18% Similarity=0.291 Sum_probs=22.0
Q ss_pred HHHHHhhhccCCchHHHHHHHHHHHHHH
Q 034652 49 LMVGIGLMYFPTCPQEALLLQQDIKEAK 76 (88)
Q Consensus 49 ~~vgy~v~tFnDcpeA~~eL~~eI~eAk 76 (88)
.++.|.+...-..||..+.|++||+++-
T Consensus 285 ~~l~~~l~~L~~~P~~~~~l~~Ei~~~~ 312 (476)
T 3e6i_A 285 TTLRYGLLILMKYPEIEEKLHEEIDRVI 312 (476)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhc
Confidence 3566666666678999999999998873
No 199
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=21.18 E-value=53 Score=20.64 Aligned_cols=17 Identities=29% Similarity=0.388 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHhcCCcc
Q 034652 70 QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~ 86 (88)
..+.||-+.|+++|+++
T Consensus 26 ~~a~eA~~~L~~~Gi~v 42 (118)
T 3ju3_A 26 GPILDVIEDLKEEGISA 42 (118)
T ss_dssp HHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHCCCce
Confidence 45667777888888765
No 200
>2bzb_A Conserved domain protein; transferase, phosphatase, phosphorylation, sporulation, antithetical, negative, regulator, spine; NMR {Bacillus anthracis} SCOP: a.30.7.1
Probab=21.16 E-value=80 Score=18.43 Aligned_cols=17 Identities=24% Similarity=0.175 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHhc
Q 034652 66 LLLQQDIKEAKEYLERK 82 (88)
Q Consensus 66 ~eL~~eI~eAk~dL~~k 82 (88)
++|.++|++.|+.|-+.
T Consensus 4 ~~L~~~IE~kR~eL~~l 20 (62)
T 2bzb_A 4 GQLKNKIENKKKELIQL 20 (62)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 57899999999988653
No 201
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=21.10 E-value=70 Score=24.93 Aligned_cols=26 Identities=12% Similarity=0.162 Sum_probs=23.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHhcCCc
Q 034652 60 TCPQEALLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 60 DcpeA~~eL~~eI~eAk~dL~~kG~~ 85 (88)
+||+-.+|-++-|+..|+.++++|++
T Consensus 71 ~~p~~~~~~~~Rl~rlr~~m~~~glD 96 (470)
T 4b28_A 71 DLPDLAAMRRFRHRRLTDHVVARGYA 96 (470)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCCChHHHHHHHHHHHHHHHHHcCCC
Confidence 48888888899999999999999987
No 202
>3iz5_c 60S ribosomal protein L35 (L29P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 2j37_5 2go5_5 3izr_c
Probab=21.03 E-value=62 Score=21.56 Aligned_cols=17 Identities=24% Similarity=0.157 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHh
Q 034652 65 ALLLQQDIKEAKEYLER 81 (88)
Q Consensus 65 ~~eL~~eI~eAk~dL~~ 81 (88)
.+||++++.|.|.+|-.
T Consensus 16 ~eEL~~~L~eLK~ELf~ 32 (124)
T 3iz5_c 16 KDDLTKQLAELKTELGQ 32 (124)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47899999999998754
No 203
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=21.02 E-value=58 Score=23.76 Aligned_cols=28 Identities=11% Similarity=0.134 Sum_probs=21.8
Q ss_pred HHHHHHhhhccCCchHHHHHHHHHHHHH
Q 034652 48 LLMVGIGLMYFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 48 l~~vgy~v~tFnDcpeA~~eL~~eI~eA 75 (88)
..++.|.+...-..||..+.|++||+++
T Consensus 312 a~~l~~~l~~L~~~P~~~~kl~~Ei~~v 339 (503)
T 3s79_A 312 SVSLFFMLFLIAKHPNVEEAIIKEIQTV 339 (503)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 3456666666667899999999999986
No 204
>4ets_A Ferric uptake regulation protein; metal binding protein, transcription factor; 2.10A {Campylobacter jejuni subsp}
Probab=20.98 E-value=72 Score=21.13 Aligned_cols=18 Identities=17% Similarity=0.276 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHhcCCcc
Q 034652 69 QQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 69 ~~eI~eAk~dL~~kG~~~ 86 (88)
++.++++++.|+++|+++
T Consensus 14 ~~~~~~~~~~L~~~g~r~ 31 (162)
T 4ets_A 14 DVLLERFKKILRQGGLKY 31 (162)
T ss_dssp HHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHcCCCC
Confidence 455778889999999986
No 205
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=20.97 E-value=35 Score=20.10 Aligned_cols=17 Identities=18% Similarity=0.522 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhcCCcc
Q 034652 70 QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~ 86 (88)
++++++.+.|+++|+++
T Consensus 77 ~d~~~~~~~l~~~G~~~ 93 (133)
T 2p7o_A 77 EEVDEYTERIKALGVEM 93 (133)
T ss_dssp GGHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHCCCcc
Confidence 36788888888888875
No 206
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=20.96 E-value=34 Score=24.69 Aligned_cols=32 Identities=16% Similarity=0.032 Sum_probs=27.5
Q ss_pred hhhccCCchHHHHHHHHHHHHHHHHHHhcCCc
Q 034652 54 GLMYFPTCPQEALLLQQDIKEAKEYLERKGID 85 (88)
Q Consensus 54 ~v~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~ 85 (88)
|=-.|-|.-.+|+.|.++..+..+.|.++|+.
T Consensus 145 G~T~~ad~~~ay~~L~~~~p~~~~~L~~~~~~ 176 (330)
T 2q4a_A 145 GETPIVLSHVVYERMKDKHPEFVQRLEEHGLL 176 (330)
T ss_dssp CCCCEEEHHHHHHHHHHHCHHHHHHHHHHCEE
T ss_pred CceeeecHHHHHHHhhhhCHHHHHHHHhCCeE
Confidence 44567889999999999999999999988875
No 207
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=20.93 E-value=81 Score=23.41 Aligned_cols=18 Identities=28% Similarity=0.305 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 034652 64 EALLLQQDIKEAKEYLER 81 (88)
Q Consensus 64 A~~eL~~eI~eAk~dL~~ 81 (88)
.+++|+++++++.+.|++
T Consensus 315 sa~~L~~~~~~~~~~l~~ 332 (333)
T 5mdh_A 315 TAKELAEEKETAFEFLSS 332 (333)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 368889999999998875
No 208
>2uwj_E Type III export protein PSCE; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=20.92 E-value=90 Score=19.05 Aligned_cols=24 Identities=21% Similarity=0.127 Sum_probs=19.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhc
Q 034652 59 PTCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 59 nDcpeA~~eL~~eI~eAk~dL~~k 82 (88)
|--|+.+.+++.+..+|-.+.|++
T Consensus 14 ~~~~~~~~~i~~~L~qAl~~vKrq 37 (70)
T 2uwj_E 14 VADGTHAAALRQRLQAALAECRRE 37 (70)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345778899999999998888764
No 209
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=20.80 E-value=60 Score=23.74 Aligned_cols=19 Identities=5% Similarity=0.162 Sum_probs=15.8
Q ss_pred ccCCchHHHHHHHHHHHHH
Q 034652 57 YFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 57 tFnDcpeA~~eL~~eI~eA 75 (88)
...||||.+++|.+++++.
T Consensus 241 ~h~~~~e~a~~l~~~l~~~ 259 (297)
T 3nyi_A 241 GYGYDKEEGFEFMKEVEST 259 (297)
T ss_dssp EECSCHHHHHHHHHHHHHH
T ss_pred EeCCCHHHHHHHHHHHHHh
Confidence 3458999999999999765
No 210
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=20.57 E-value=1.3e+02 Score=17.06 Aligned_cols=23 Identities=17% Similarity=0.306 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCC
Q 034652 62 PQEALLLQQDIKEAKEYLERKGI 84 (88)
Q Consensus 62 peA~~eL~~eI~eAk~dL~~kG~ 84 (88)
++-..++.+||+.=++-||..|.
T Consensus 24 e~~c~~~eQEieRL~~LLkqHgl 46 (48)
T 3vmx_A 24 EFSCSEKEQEIERLNKLLKQNGL 46 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHccHHHHHHHHHHHHHHHcCC
Confidence 44556777999999999999885
No 211
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.56 E-value=97 Score=18.27 Aligned_cols=21 Identities=29% Similarity=0.109 Sum_probs=15.5
Q ss_pred chHHHHHHHHHHHHHHHHHHh
Q 034652 61 CPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 61 cpeA~~eL~~eI~eAk~dL~~ 81 (88)
.++.+++..++|.+|-+-|+.
T Consensus 45 ~~~~a~~~f~~i~~Ay~~L~d 65 (92)
T 2dmx_A 45 NKEEAEKKFKLVSEAYEVLSD 65 (92)
T ss_dssp CSHHHHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHHHHHCC
Confidence 345777888888888877753
No 212
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=20.50 E-value=60 Score=23.67 Aligned_cols=27 Identities=15% Similarity=0.289 Sum_probs=21.1
Q ss_pred HHHHHhhhccCCchHHHHHHHHHHHHH
Q 034652 49 LMVGIGLMYFPTCPQEALLLQQDIKEA 75 (88)
Q Consensus 49 ~~vgy~v~tFnDcpeA~~eL~~eI~eA 75 (88)
.++.|.+...-..||..+.|++||+++
T Consensus 287 ~~l~~~l~~L~~~P~~~~kl~~Ei~~~ 313 (477)
T 1r9o_A 287 TTLRYALLLLLKHPEVTAKVQEEIERV 313 (477)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHh
Confidence 455666666666899999999999886
No 213
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A*
Probab=20.46 E-value=45 Score=20.83 Aligned_cols=22 Identities=14% Similarity=0.102 Sum_probs=17.3
Q ss_pred hccCCchHHHHHHHHHHHHHHH
Q 034652 56 MYFPTCPQEALLLQQDIKEAKE 77 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~ 77 (88)
-.|+|.+||-+..++.+++|++
T Consensus 113 ~i~~t~~~Al~~~~~~~~~~~~ 134 (135)
T 4dgf_A 113 RVFDHIDKALAYAKLLVETAEE 134 (135)
T ss_dssp GBCSSHHHHHHHHHHHHHC---
T ss_pred ceeCCHHHHHHHHHHHHhhhhc
Confidence 4799999999999999998875
No 214
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=20.37 E-value=88 Score=17.64 Aligned_cols=14 Identities=21% Similarity=0.173 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHH
Q 034652 66 LLLQQDIKEAKEYL 79 (88)
Q Consensus 66 ~eL~~eI~eAk~dL 79 (88)
++|+++++|-++.|
T Consensus 36 ~~L~~~~~el~~~l 49 (53)
T 2yy0_A 36 EAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33444444444433
No 215
>1efd_N Ferrichrome-binding periplasmic protein; periplasmic binding protein-siderophore complex, FHUD complex with gallichrome; HET: GCR; 1.90A {Escherichia coli} SCOP: c.92.2.1 PDB: 1k7s_N* 1k2v_N* 1esz_A*
Probab=20.30 E-value=98 Score=20.99 Aligned_cols=23 Identities=4% Similarity=-0.032 Sum_probs=18.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHhc
Q 034652 60 TCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 60 DcpeA~~eL~~eI~eAk~dL~~k 82 (88)
+.+|.++++.+++++.-++++++
T Consensus 116 g~~~~A~~~~~~~~~~~~~i~~~ 138 (266)
T 1efd_N 116 NLQSAAETHLAQYEDFIRSMKPR 138 (266)
T ss_dssp TCHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999988888877777765
No 216
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=20.22 E-value=68 Score=19.04 Aligned_cols=23 Identities=22% Similarity=0.297 Sum_probs=13.5
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
++-+.||-.. .||..|+++|+++
T Consensus 24 y~~~~Cp~C~--------~~~~~L~~~~i~~ 46 (113)
T 3rhb_A 24 YSKTWCSYCT--------EVKTLFKRLGVQP 46 (113)
T ss_dssp EECTTCHHHH--------HHHHHHHHTTCCC
T ss_pred EECCCChhHH--------HHHHHHHHcCCCC
Confidence 4445666543 5666666666654
No 217
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=20.16 E-value=83 Score=23.00 Aligned_cols=28 Identities=7% Similarity=0.093 Sum_probs=22.2
Q ss_pred HHHHHhhhccCCchHHHHHHHHHHHHHH
Q 034652 49 LMVGIGLMYFPTCPQEALLLQQDIKEAK 76 (88)
Q Consensus 49 ~~vgy~v~tFnDcpeA~~eL~~eI~eAk 76 (88)
.++.|.+...-..||..+.|++||+++-
T Consensus 280 ~~l~~~l~~L~~~P~~~~kl~~Ei~~v~ 307 (498)
T 3b6h_A 280 PAAFWLLLFLLKNPEALAAVRGELESIL 307 (498)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence 4556666666778999999999999763
No 218
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.12 E-value=97 Score=17.77 Aligned_cols=21 Identities=29% Similarity=0.175 Sum_probs=16.5
Q ss_pred chHHHHHHHHHHHHHHHHHHh
Q 034652 61 CPQEALLLQQDIKEAKEYLER 81 (88)
Q Consensus 61 cpeA~~eL~~eI~eAk~dL~~ 81 (88)
.++.+.+..++|.+|-+-|..
T Consensus 45 ~~~~a~~~f~~i~~Ay~~L~d 65 (82)
T 2ej7_A 45 NKEEAERRFKQVAEAYEVLSD 65 (82)
T ss_dssp THHHHHHHHHHHHHHHHHHSS
T ss_pred cHHHHHHHHHHHHHHHHHHCC
Confidence 356778888999999888764
No 219
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=20.12 E-value=1e+02 Score=23.87 Aligned_cols=17 Identities=18% Similarity=0.198 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHhcCCcc
Q 034652 70 QDIKEAKEYLERKGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~kG~~~ 86 (88)
++|+++++-|+++|+.+
T Consensus 325 e~i~~f~~iL~~~Gi~v 341 (404)
T 3rfa_A 325 SRIDRFSKVLMSYGFTT 341 (404)
T ss_dssp HHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCcE
Confidence 67888888888888754
No 220
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=20.12 E-value=1e+02 Score=19.26 Aligned_cols=23 Identities=17% Similarity=0.075 Sum_probs=19.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHhc
Q 034652 60 TCPQEALLLQQDIKEAKEYLERK 82 (88)
Q Consensus 60 DcpeA~~eL~~eI~eAk~dL~~k 82 (88)
+.+++-.+....|++|++|+-+|
T Consensus 90 es~~eK~~Wl~~~~~a~~~~~~~ 112 (113)
T 1zc3_B 90 ENAKIKREWLEVLEETKRALSDK 112 (113)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhc
Confidence 46888899999999999998664
No 221
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=20.09 E-value=74 Score=17.29 Aligned_cols=23 Identities=26% Similarity=0.381 Sum_probs=11.5
Q ss_pred hccCCchHHHHHHHHHHHHHHHHHHhcCCcc
Q 034652 56 MYFPTCPQEALLLQQDIKEAKEYLERKGIDV 86 (88)
Q Consensus 56 ~tFnDcpeA~~eL~~eI~eAk~dL~~kG~~~ 86 (88)
++-+.||... +++..|+++|+++
T Consensus 6 f~~~~C~~C~--------~~~~~l~~~~i~~ 28 (81)
T 1h75_A 6 YTRNDCVQCH--------ATKRAMENRGFDF 28 (81)
T ss_dssp EECTTCHHHH--------HHHHHHHHTTCCC
T ss_pred EcCCCChhHH--------HHHHHHHHCCCCe
Confidence 3445666553 2444455555544
No 222
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=20.09 E-value=37 Score=23.28 Aligned_cols=24 Identities=21% Similarity=0.293 Sum_probs=18.1
Q ss_pred chHHHHHHHHHHHHHHHHHHhcCCccC
Q 034652 61 CPQEALLLQQDIKEAKEYLERKGIDVS 87 (88)
Q Consensus 61 cpeA~~eL~~eI~eAk~dL~~kG~~~d 87 (88)
|.+|.-||+++|+ +.|+++|.+|.
T Consensus 14 sDhaG~~lK~~i~---~~L~~~G~eV~ 37 (148)
T 4em8_A 14 SDHAGVELRLFLS---AYLRDLGCEVF 37 (148)
T ss_dssp ECGGGHHHHHHHH---HHHHHTTCEEE
T ss_pred ECchhHHHHHHHH---HHHHHCCCEEE
Confidence 4567778888774 67899998764
No 223
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=20.08 E-value=78 Score=23.76 Aligned_cols=14 Identities=21% Similarity=0.038 Sum_probs=7.3
Q ss_pred CchHHHHHHHHHHH
Q 034652 60 TCPQEALLLQQDIK 73 (88)
Q Consensus 60 DcpeA~~eL~~eI~ 73 (88)
|-+||.++++++|+
T Consensus 370 t~eeal~~~~~~i~ 383 (471)
T 3mq9_A 370 TVDEALKDAQTRIT 383 (471)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 45555555554443
No 224
>2qdq_A Talin-1; dimerisation domain, C-terminal actin binding site, ABS3, latch domain, structural protein; 2.20A {Mus musculus}
Probab=20.07 E-value=1.2e+02 Score=17.35 Aligned_cols=15 Identities=20% Similarity=0.421 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHh
Q 034652 67 LLQQDIKEAKEYLER 81 (88)
Q Consensus 67 eL~~eI~eAk~dL~~ 81 (88)
-..+|.+|||+-|..
T Consensus 19 r~ErELEeAr~~La~ 33 (50)
T 2qdq_A 19 RKERELEEARKKLAQ 33 (50)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 345789999988763
No 225
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=20.01 E-value=67 Score=19.08 Aligned_cols=17 Identities=18% Similarity=0.198 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHh---cCCcc
Q 034652 70 QDIKEAKEYLER---KGIDV 86 (88)
Q Consensus 70 ~eI~eAk~dL~~---kG~~~ 86 (88)
++++++.+.|++ +|+++
T Consensus 84 ~dv~~~~~~l~~~~~~G~~~ 103 (132)
T 3sk2_A 84 EDVDKLFNEWTKQKSHQIIV 103 (132)
T ss_dssp HHHHHHHHHHHHCSSSCCEE
T ss_pred HHHHHHHHHHHhhhcCCCEE
Confidence 468888888888 99875
Done!