BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034653
MKGLIWATAVDSKHQKRVLSLYRQILRSLNSPKLELSLAARLAKKAEARAIFMVGSEERS
IHNIQDLIDTAEYALSLLKEGKIPKHIQ

High Scoring Gene Products

Symbol, full name Information P value
AT1G65032 protein from Arabidopsis thaliana 5.3e-17

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034653
        (88 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4515102717 - symbol:AT1G65032 "AT1G65032" spec...   209  5.3e-17   1


>TAIR|locus:4515102717 [details] [associations]
            symbol:AT1G65032 "AT1G65032" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 InterPro:IPR008011 Pfam:PF13232
            IPI:IPI00518337 RefSeq:NP_001117549.1 UniGene:At.43680
            UniGene:At.74019 EnsemblPlants:AT1G65032.1 GeneID:6240339
            KEGG:ath:AT1G65032 OMA:ECRAIFI Uniprot:F4I8C2
        Length = 91

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 45/87 (51%), Positives = 56/87 (64%)

Query:     1 MKGLIWATAVDS-KHQKRVLSLYRQILRSLNSPXXXXXXXXXXXXXXXXXXIFMVGSEER 59
             MK LIW TA ++ K++ +VLSLYRQ+LRS+NSP                  IF+ GSEE 
Sbjct:     1 MKSLIWLTAEEAAKNRGKVLSLYRQLLRSINSPKLQLSYASRLAKKAEVRTIFLFGSEEI 60

Query:    60 SIHNIQDLIDTAEYALSLLKEGKIPKH 86
             S HN+ DLI T EYALS LK+GKIP +
Sbjct:    61 SKHNVADLIRTGEYALSQLKQGKIPNN 87


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.376    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       88        70   0.00091  102 3  11 22  0.45    28
                                                     29  0.41    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  486 (52 KB)
  Total size of DFA:  85 KB (2065 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.14u 0.18s 7.32t   Elapsed:  00:00:00
  Total cpu time:  7.14u 0.18s 7.32t   Elapsed:  00:00:00
  Start:  Thu May  9 22:30:16 2013   End:  Thu May  9 22:30:16 2013

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