Query 034660
Match_columns 88
No_of_seqs 118 out of 137
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 08:07:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034660.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034660hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1zy3a1 f.1.4.1 (A:1-170) Apop 26.7 21 0.0015 22.9 2.6 32 42-73 71-102 (170)
2 d1pq1a_ f.1.4.1 (A:) Apoptosis 23.6 26 0.0019 23.0 2.8 32 42-73 116-147 (196)
3 d1g5ma_ f.1.4.1 (A:) Bcl-2 {Hu 21.2 23 0.0017 22.5 2.0 30 44-73 82-111 (164)
4 d1hfel1 c.96.1.1 (L:87-398) Fe 20.1 43 0.0031 23.0 3.4 50 36-85 31-83 (312)
5 d2fcla1 d.218.1.11 (A:1-157) H 18.5 16 0.0012 22.2 0.7 37 47-86 8-44 (157)
6 d2e74g1 f.23.26.1 (G:9-35) Pet 16.2 59 0.0043 15.1 2.3 19 25-43 7-25 (27)
7 d2jm6b1 f.1.4.1 (B:147-308) EA 15.5 71 0.0052 19.6 3.4 31 42-72 74-105 (162)
8 d1k3ka_ f.1.4.1 (A:) Bcl-2 hom 13.3 40 0.0029 21.2 1.6 31 43-73 63-94 (146)
9 d1okca_ f.42.1.1 (A:) ADP,ATP 11.3 1.2E+02 0.0088 18.9 3.7 52 16-67 7-74 (292)
10 d2e74d2 f.23.12.1 (D:12-45) IS 11.2 40 0.0029 16.6 0.8 16 62-77 12-27 (34)
No 1
>d1zy3a1 f.1.4.1 (A:1-170) Apoptosis regulator Bcl-w {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.68 E-value=21 Score=22.85 Aligned_cols=32 Identities=19% Similarity=0.084 Sum_probs=25.9
Q ss_pred CCchhhHHHHHHHHHhhhhhhhhhhhhhhhhh
Q 034660 42 GLSGITRASFVAKSIGKYGFQCGLVAGVFSST 73 (88)
Q Consensus 42 ~~~~~~~~~~~~k~mg~~~~~~g~vggvysg~ 73 (88)
+.+..+.+..+++++=+.|.+||-|-++|+..
T Consensus 71 ~~~~~~~f~~Va~elF~dginWGRIVal~~F~ 102 (170)
T d1zy3a1 71 PGSAQQRFTQVSDELFQGGPNWGRLVAFFVFG 102 (170)
T ss_dssp CCCSHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 34567888899999989999999888877654
No 2
>d1pq1a_ f.1.4.1 (A:) Apoptosis regulator Bcl-xL {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.60 E-value=26 Score=23.01 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=25.9
Q ss_pred CCchhhHHHHHHHHHhhhhhhhhhhhhhhhhh
Q 034660 42 GLSGITRASFVAKSIGKYGFQCGLVAGVFSST 73 (88)
Q Consensus 42 ~~~~~~~~~~~~k~mg~~~~~~g~vggvysg~ 73 (88)
+.+..+.+..+++++=+.|.+||-|-++|+..
T Consensus 116 ~~~a~~~F~~V~~elF~dginWGRIVal~~F~ 147 (196)
T d1pq1a_ 116 PGTAYQSFEQVVNELFRDGVNWGRIVAFFSFG 147 (196)
T ss_dssp TTTHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 45667788899999999999999887777654
No 3
>d1g5ma_ f.1.4.1 (A:) Bcl-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.21 E-value=23 Score=22.49 Aligned_cols=30 Identities=17% Similarity=0.225 Sum_probs=23.9
Q ss_pred chhhHHHHHHHHHhhhhhhhhhhhhhhhhh
Q 034660 44 SGITRASFVAKSIGKYGFQCGLVAGVFSST 73 (88)
Q Consensus 44 ~~~~~~~~~~k~mg~~~~~~g~vggvysg~ 73 (88)
+..+.+..+++++-+.|.+||-|-++|+..
T Consensus 82 ~~~~~f~~Va~elF~dginWGRIVal~~F~ 111 (164)
T d1g5ma_ 82 TARGRFATVVEELFRDGVNWGRIVAFFEFG 111 (164)
T ss_dssp HHHHHHHHHHHHHTTSCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 456678888888889999999887777654
No 4
>d1hfel1 c.96.1.1 (L:87-398) Fe-only hydrogenase larger subunit, C-domain {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=20.15 E-value=43 Score=22.99 Aligned_cols=50 Identities=12% Similarity=0.048 Sum_probs=35.3
Q ss_pred ccccccCCchhhHHHHHHHHHhhhhhhhhhhhhhhhhhhhh---hhhhhhhcc
Q 034660 36 QLARKRGLSGITRASFVAKSIGKYGFQCGLVAGVFSSTRCG---IQRYRKQND 85 (88)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~k~mg~~~~~~g~vggvysg~ec~---ie~~Rgk~D 85 (88)
.+.+..+..+..++...+|++|-....=..+|+-++-.|.. +|+++.++|
T Consensus 31 ~fg~~~~~~~~~kl~~~Lk~lGF~~V~d~~~gad~~~~e~a~E~~~r~~~~~~ 83 (312)
T d1hfel1 31 AFGMPVGSVTTGKMLAALQKLGFAHCWDTEFTADVTIWEEGSEFVERLTKKSD 83 (312)
T ss_dssp GGTCCTTCCCHHHHHHHHHHHTCSEECCHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HhCCCccccCHHHHHHHHHHcCCCEEEEchHHHHHHHHHHHHHHHHHHhccCC
Confidence 34455667778899999999999887666777777766655 455555554
No 5
>d2fcla1 d.218.1.11 (A:1-157) Hypothetical protein TM1012 {Thermotoga maritima [TaxId: 2336]}
Probab=18.52 E-value=16 Score=22.23 Aligned_cols=37 Identities=5% Similarity=-0.023 Sum_probs=26.7
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhhccC
Q 034660 47 TRASFVAKSIGKYGFQCGLVAGVFSSTRCGIQRYRKQNDW 86 (88)
Q Consensus 47 ~~~~~~~k~mg~~~~~~g~vggvysg~ec~ie~~Rgk~Dw 86 (88)
+.++.+++.+-+.+..|+++||+=... ++.. |..+|+
T Consensus 8 ~~l~~~~~~l~~~~i~~~i~Gg~A~~~-~G~~--r~t~Di 44 (157)
T d2fcla1 8 RVLRKIYDRLKNEKVNWVVTGSLSFAL-QGVP--VEVHDI 44 (157)
T ss_dssp HHHHHHHHHHTTSSCCEEEEHHHHHHH-TTCC--CCCCSE
T ss_pred HHHHHHHHHHHHCCCCEEEEhHHHHHH-CCCC--CCCCce
Confidence 457778888889999999999865433 4554 555664
No 6
>d2e74g1 f.23.26.1 (G:9-35) PetG subunit of the cytochrome b6f complex {Mastigocladus laminosus [TaxId: 83541]}
Probab=16.17 E-value=59 Score=15.07 Aligned_cols=19 Identities=21% Similarity=0.072 Sum_probs=12.5
Q ss_pred HHHHHHHhhhcccccccCC
Q 034660 25 AGAIWGLCAGPQLARKRGL 43 (88)
Q Consensus 25 ~Ga~~gl~~~s~~~~~~~~ 43 (88)
+-.+-|+|.++|...+++.
T Consensus 7 ~~tl~glf~aayqqykrpn 25 (27)
T d2e74g1 7 FATLGGLFYAAYQQYKRPN 25 (27)
T ss_dssp HHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 3455678888887666653
No 7
>d2jm6b1 f.1.4.1 (B:147-308) EAT/MCL-1 (Myeloid cell leukemia sequence 1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.52 E-value=71 Score=19.65 Aligned_cols=31 Identities=19% Similarity=0.131 Sum_probs=25.1
Q ss_pred CCchhhHHHHHHHHHhhhhh-hhhhhhhhhhh
Q 034660 42 GLSGITRASFVAKSIGKYGF-QCGLVAGVFSS 72 (88)
Q Consensus 42 ~~~~~~~~~~~~k~mg~~~~-~~g~vggvysg 72 (88)
+.+..+.+..+++.+=+.|. |||-|-++|+.
T Consensus 74 ~~~~~~~f~~Va~elf~dG~~NWGRIval~~F 105 (162)
T d2jm6b1 74 NEGDVKSFSRVMVHVFKDGVTNWGRIVTLISF 105 (162)
T ss_dssp STTHHHHHHHHHHHHTTTCCCCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHcCCCCchHHHHHHHHH
Confidence 34557788899999999986 99988888874
No 8
>d1k3ka_ f.1.4.1 (A:) Bcl-2 homolog {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=13.33 E-value=40 Score=21.15 Aligned_cols=31 Identities=13% Similarity=0.208 Sum_probs=24.2
Q ss_pred CchhhHHHHHHHHHhhhhh-hhhhhhhhhhhh
Q 034660 43 LSGITRASFVAKSIGKYGF-QCGLVAGVFSST 73 (88)
Q Consensus 43 ~~~~~~~~~~~k~mg~~~~-~~g~vggvysg~ 73 (88)
.+..+.+..+++++=..|. |||-|-++|+.-
T Consensus 63 ~~~~~~f~~V~~elF~DG~~NWGRIVaLfaFg 94 (146)
T d1k3ka_ 63 TTGIDQLGLSMLQVSGDGNMNWGRALAILTFG 94 (146)
T ss_dssp HHHHHHHHTHHHHHCSSCSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 3556678888899999996 999877777654
No 9
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]}
Probab=11.32 E-value=1.2e+02 Score=18.87 Aligned_cols=52 Identities=25% Similarity=0.131 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccC----------------CchhhHHHHHHHHHhhhhhhhhhhh
Q 034660 16 VDAILRIGTAGAIWGLCAGPQLARKRG----------------LSGITRASFVAKSIGKYGFQCGLVA 67 (88)
Q Consensus 16 vd~fv~~g~~Ga~~gl~~~s~~~~~~~----------------~~~~~~~~~~~k~mg~~~~~~g~vg 67 (88)
.+.|+-++++|++--++.-++|.++-. ....+.+++..++=|-.+++-|+..
T Consensus 7 ~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~ 74 (292)
T d1okca_ 7 LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLA 74 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccch
Confidence 356788888888888888888875421 0122335555565555666555443
No 10
>d2e74d2 f.23.12.1 (D:12-45) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Mastigocladus laminosus [TaxId: 83541]}
Probab=11.15 E-value=40 Score=16.57 Aligned_cols=16 Identities=25% Similarity=0.281 Sum_probs=9.3
Q ss_pred hhhhhhhhhhhhhhhh
Q 034660 62 QCGLVAGVFSSTRCGI 77 (88)
Q Consensus 62 ~~g~vggvysg~ec~i 77 (88)
.||.+.|+..|.-|-+
T Consensus 12 tfgt~tg~alg~lypv 27 (34)
T d2e74d2 12 AFGTVTGVALGALYPL 27 (34)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHhhhhhH
Confidence 6776666655554443
Done!