BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034673
(87 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CJJ|A Chain A, Crystal Structure Of The Myb Domain Of The Rad
Transcription Factor From Antirrhinum Majus
Length = 93
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 64/84 (76%), Gaps = 5/84 (5%)
Query: 4 EQNKKFERALAVYDKDTPDRWQNVARAVGGGKSPDDVKRHYDRLVEDLIFIESAQFPLPN 63
++NK FERALAVYDKDTPDRW NVARAV G++P++VK+HY+ LVED+ +IES + P PN
Sbjct: 14 KENKAFERALAVYDKDTPDRWANVARAV-EGRTPEEVKKHYEILVEDIKYIESGKVPFPN 72
Query: 64 YKNTGNNCIGILADAPRLMKNLKL 87
Y+ TG N + D R +NLK+
Sbjct: 73 YRTTGGN---MKTDEKRF-RNLKI 92
>pdb|4EEF|G Chain G, Crystal Structure Of The Designed Inhibitor Protein
F-Hb80.4 In Complex With The 1918 Influenza Virus
Hemagglutinin.
pdb|4EEF|H Chain H, Crystal Structure Of The Designed Inhibitor Protein
F-Hb80.4 In Complex With The 1918 Influenza Virus
Hemagglutinin.
pdb|4EEF|I Chain I, Crystal Structure Of The Designed Inhibitor Protein
F-Hb80.4 In Complex With The 1918 Influenza Virus
Hemagglutinin
Length = 74
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 5 QNKKFERALAVYDKDTPDRWQNVARAVGGGKSPDDVKRHYD 45
+N FE AL+ +KDTPDRW+ VA+ V G++P++VK+HY+
Sbjct: 27 ENIAFEIALSFTNKDTPDRWKKVAQYV-KGRTPEEVKKHYE 66
>pdb|2M2E|A Chain A, Solution Nmr Structure Of The Sant Domain Of Human
Dnajc2, Northeast Structural Genomics Consortium Target
Hr8254a
Length = 73
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 4 EQNKKFERALAVYDKDTPDRWQNVARAVGGGKSPDDVKRHYDRLVEDLIFIESAQ 58
E+ K E+AL Y +TP+RW+ +A AV G D +KR Y LVE + ++AQ
Sbjct: 9 EEQKLLEQALKTYPVNTPERWKKIAEAVPGRTKKDCMKR-YKELVEMVKAKKAAQ 62
>pdb|1WGX|A Chain A, Solution Structure Of Rsgi Ruh-022, A Myb Dna-Binding
Domain In Human Cdna
Length = 73
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 7 KKFERALAVYDKDTPDRWQNVARAVGGGKSPDDVKRHY 44
+K A A K P W VA AV G +SP++ +R Y
Sbjct: 17 QKLHCAFASLPKHKPGFWSEVAAAV-GSRSPEECQRKY 53
>pdb|2CQR|A Chain A, Solution Structure Of Rsgi Ruh-043, A Myb Dna-Binding
Domain In Human Cdna
Length = 73
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 5 QNKKFERALAVYDKDTPDRWQNVARAVGGGKSPDDVKRHYDRLV 48
Q K E AL Y + + D W +AR V KS +D Y LV
Sbjct: 25 QQKLLELALQQYPRGSSDCWDKIARCV-PSKSKEDCIARYKLLV 67
>pdb|3IS7|A Chain A, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|B Chain B, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|C Chain C, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|D Chain D, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|E Chain E, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|F Chain F, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|G Chain G, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|H Chain H, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|I Chain I, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|J Chain J, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|K Chain K, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|L Chain L, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|M Chain M, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|N Chain N, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|O Chain O, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|P Chain P, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|Q Chain Q, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|R Chain R, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|S Chain S, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|T Chain T, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|U Chain U, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|V Chain V, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|W Chain W, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS7|X Chain X, Structure Of Mineralized Bfrb From Pseudomonas
Aeruginosa To 2.1a Resolution
pdb|3IS8|A Chain A, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|B Chain B, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|C Chain C, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|D Chain D, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|E Chain E, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|F Chain F, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|G Chain G, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|H Chain H, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|I Chain I, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|J Chain J, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|K Chain K, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|L Chain L, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|M Chain M, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|N Chain N, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|O Chain O, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|P Chain P, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|Q Chain Q, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|R Chain R, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|S Chain S, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|T Chain T, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|U Chain U, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|V Chain V, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|W Chain W, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3IS8|X Chain X, Structure Of Mineralized Bfrb Soaked With Feso4 From
Pseudomonas Aeruginosa To 2.25a Resolution
pdb|3ISE|A Chain A, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|B Chain B, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|C Chain C, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|D Chain D, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|E Chain E, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|F Chain F, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|G Chain G, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|H Chain H, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|I Chain I, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|J Chain J, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|K Chain K, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|L Chain L, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|M Chain M, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|N Chain N, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|O Chain O, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|P Chain P, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|Q Chain Q, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|R Chain R, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|S Chain S, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|T Chain T, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|U Chain U, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|V Chain V, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|W Chain W, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISE|X Chain X, Structure Of Mineralized Bfrb (Double Soak) From
Pseudomonas Aeruginosa To 2.8a Resolution
pdb|3ISF|A Chain A, Structure Of Non-Mineralized Bfrb (As-Isolated) From
Pseudomonas Aeruginosa To 2.07a Resolution
pdb|3ISF|B Chain B, Structure Of Non-Mineralized Bfrb (As-Isolated) From
Pseudomonas Aeruginosa To 2.07a Resolution
pdb|3ISF|C Chain C, Structure Of Non-Mineralized Bfrb (As-Isolated) From
Pseudomonas Aeruginosa To 2.07a Resolution
pdb|3ISF|D Chain D, Structure Of Non-Mineralized Bfrb (As-Isolated) From
Pseudomonas Aeruginosa To 2.07a Resolution
pdb|3ISF|E Chain E, Structure Of Non-Mineralized Bfrb (As-Isolated) From
Pseudomonas Aeruginosa To 2.07a Resolution
pdb|3ISF|F Chain F, Structure Of Non-Mineralized Bfrb (As-Isolated) From
Pseudomonas Aeruginosa To 2.07a Resolution
pdb|4E6K|A Chain A, 2.0 A Resolution Structure Of Pseudomonas Aeruginosa
Bacterioferritin (Bfrb) In Complex With
Bacterioferritin Associated Ferredoxin (Bfd)
pdb|4E6K|B Chain B, 2.0 A Resolution Structure Of Pseudomonas Aeruginosa
Bacterioferritin (Bfrb) In Complex With
Bacterioferritin Associated Ferredoxin (Bfd)
pdb|4E6K|C Chain C, 2.0 A Resolution Structure Of Pseudomonas Aeruginosa
Bacterioferritin (Bfrb) In Complex With
Bacterioferritin Associated Ferredoxin (Bfd)
pdb|4E6K|D Chain D, 2.0 A Resolution Structure Of Pseudomonas Aeruginosa
Bacterioferritin (Bfrb) In Complex With
Bacterioferritin Associated Ferredoxin (Bfd)
pdb|4E6K|E Chain E, 2.0 A Resolution Structure Of Pseudomonas Aeruginosa
Bacterioferritin (Bfrb) In Complex With
Bacterioferritin Associated Ferredoxin (Bfd)
pdb|4E6K|F Chain F, 2.0 A Resolution Structure Of Pseudomonas Aeruginosa
Bacterioferritin (Bfrb) In Complex With
Bacterioferritin Associated Ferredoxin (Bfd)
Length = 158
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 5/39 (12%)
Query: 35 KSPDDVKRHYDRLVEDLIFIESAQFPLPNYKNTGNNCIG 73
+S D++K H D+L+E ++F+E LPN ++ G IG
Sbjct: 47 ESIDEMK-HADKLIERILFLEG----LPNLQDLGKLLIG 80
>pdb|3CYM|A Chain A, Crystal Structure Of Protein Bad_0989 From Bifidobacterium
Adolescentis
Length = 440
Score = 27.7 bits (60), Expect = 1.9, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 2 DPEQNKKFERALAVYDKDTPDRWQNV 27
D EQ+K FER + K P W+N+
Sbjct: 293 DSEQDKMFERYAPIQRKIKPSMWKNI 318
>pdb|1CZA|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I
Complexed With Glucose, Glucose-6-Phosphate, And Adp
Length = 917
Score = 26.6 bits (57), Expect = 3.4, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 30 AVGGGKSPDDVKRHYDRLVED 50
A G DD++ HYDRLV++
Sbjct: 711 AFGDNGCLDDIRTHYDRLVDE 731
>pdb|1DGK|N Chain N, Mutant Monomer Of Recombinant Human Hexokinase Type I With
Glucose And Adp In The Active Site
Length = 917
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 30 AVGGGKSPDDVKRHYDRLVED 50
A G DD++ HYDRLV++
Sbjct: 711 AFGDNGCLDDIRTHYDRLVDE 731
>pdb|1HKB|A Chain A, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
pdb|1HKB|B Chain B, Crystal Structure Of Recombinant Human Brain Hexokinase
Type I Complexed With Glucose And Glucose-6-Phosphate
Length = 917
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 30 AVGGGKSPDDVKRHYDRLVED 50
A G DD++ HYDRLV++
Sbjct: 711 AFGDNGCLDDIRTHYDRLVDE 731
>pdb|3E2C|A Chain A, Escherichia Coli Bacterioferritin Mutant E128rE135R
pdb|3E2C|B Chain B, Escherichia Coli Bacterioferritin Mutant E128rE135R
Length = 158
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 35 KSPDDVKRHYDRLVEDLIFIESAQFPLPNYKNTGNNCIG 73
+S D++K H DR +E ++F+E LPN ++ G IG
Sbjct: 47 ESIDEMK-HADRYIERILFLEG----LPNLQDLGKLNIG 80
>pdb|3GHQ|A Chain A, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|B Chain B, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|C Chain C, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|D Chain D, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|E Chain E, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|F Chain F, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|G Chain G, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|H Chain H, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|I Chain I, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|J Chain J, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|K Chain K, Crystal Structure Of E. Coli W35f Bfr Mutant
pdb|3GHQ|L Chain L, Crystal Structure Of E. Coli W35f Bfr Mutant
Length = 158
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 35 KSPDDVKRHYDRLVEDLIFIESAQFPLPNYKNTGNNCIG 73
+S D++K H DR +E ++F+E LPN ++ G IG
Sbjct: 47 ESIDEMK-HADRYIERILFLEG----LPNLQDLGKLNIG 80
>pdb|3E1Q|A Chain A, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|B Chain B, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|C Chain C, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|D Chain D, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|E Chain E, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|F Chain F, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|G Chain G, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|H Chain H, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|I Chain I, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|J Chain J, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|K Chain K, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron.
pdb|3E1Q|L Chain L, Crystal Structure Of W133f Variant E. Coli
Bacterioferritn With Iron
Length = 158
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 35 KSPDDVKRHYDRLVEDLIFIESAQFPLPNYKNTGNNCIG 73
+S D++K H DR +E ++F+E LPN ++ G IG
Sbjct: 47 ESIDEMK-HADRYIERILFLEG----LPNLQDLGKLNIG 80
>pdb|1BCF|A Chain A, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BCF|B Chain B, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BFR|A Chain A, Iron Storage And Electron Transport
pdb|1BFR|B Chain B, Iron Storage And Electron Transport
pdb|1BFR|C Chain C, Iron Storage And Electron Transport
pdb|1BFR|D Chain D, Iron Storage And Electron Transport
pdb|1BFR|E Chain E, Iron Storage And Electron Transport
pdb|1BFR|F Chain F, Iron Storage And Electron Transport
pdb|1BFR|G Chain G, Iron Storage And Electron Transport
pdb|1BFR|H Chain H, Iron Storage And Electron Transport
pdb|1BFR|I Chain I, Iron Storage And Electron Transport
pdb|1BFR|J Chain J, Iron Storage And Electron Transport
pdb|1BFR|K Chain K, Iron Storage And Electron Transport
pdb|1BFR|L Chain L, Iron Storage And Electron Transport
pdb|1BFR|M Chain M, Iron Storage And Electron Transport
pdb|1BFR|N Chain N, Iron Storage And Electron Transport
pdb|1BFR|O Chain O, Iron Storage And Electron Transport
pdb|1BFR|P Chain P, Iron Storage And Electron Transport
pdb|1BFR|Q Chain Q, Iron Storage And Electron Transport
pdb|1BFR|R Chain R, Iron Storage And Electron Transport
pdb|1BFR|S Chain S, Iron Storage And Electron Transport
pdb|1BFR|T Chain T, Iron Storage And Electron Transport
pdb|1BFR|U Chain U, Iron Storage And Electron Transport
pdb|1BFR|V Chain V, Iron Storage And Electron Transport
pdb|1BFR|W Chain W, Iron Storage And Electron Transport
pdb|1BFR|X Chain X, Iron Storage And Electron Transport
pdb|2HTN|A Chain A, E. Coli Bacterioferritin In Its As-Isolated Form
pdb|2HTN|B Chain B, E. Coli Bacterioferritin In Its As-Isolated Form
pdb|2HTN|C Chain C, E. Coli Bacterioferritin In Its As-Isolated Form
pdb|2HTN|D Chain D, E. Coli Bacterioferritin In Its As-Isolated Form
pdb|2HTN|E Chain E, E. Coli Bacterioferritin In Its As-Isolated Form
pdb|2HTN|F Chain F, E. Coli Bacterioferritin In Its As-Isolated Form
pdb|2HTN|G Chain G, E. Coli Bacterioferritin In Its As-Isolated Form
pdb|2HTN|H Chain H, E. Coli Bacterioferritin In Its As-Isolated Form
pdb|1BCF|C Chain C, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BCF|D Chain D, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BCF|E Chain E, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BCF|F Chain F, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BCF|G Chain G, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BCF|H Chain H, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BCF|I Chain I, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BCF|J Chain J, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BCF|K Chain K, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|1BCF|L Chain L, The Structure Of A Unique, Two-Fold Symmetric,
Haem-Binding Site
pdb|2VXI|A Chain A, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|B Chain B, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|C Chain C, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|D Chain D, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|E Chain E, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|F Chain F, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|G Chain G, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|H Chain H, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|I Chain I, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|J Chain J, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|K Chain K, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|2VXI|L Chain L, The Binding Of Heme And Zinc In Escherichia Coli
Bacterioferritin
pdb|3E1J|A Chain A, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|B Chain B, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|C Chain C, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|D Chain D, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|E Chain E, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|F Chain F, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|G Chain G, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|H Chain H, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|I Chain I, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|J Chain J, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|K Chain K, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1J|L Chain L, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
An Unoccupied Ferroxidase Centre (Apo-Bfr).
pdb|3E1L|A Chain A, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|B Chain B, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|C Chain C, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|D Chain D, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|E Chain E, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|F Chain F, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|G Chain G, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|H Chain H, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|I Chain I, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|J Chain J, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|K Chain K, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1L|L Chain L, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Soaked In Phosphate With An Alternative Conformation Of
The Unoccupied Ferroxidase Centre (Apo-Bfr Ii).
pdb|3E1M|A Chain A, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|B Chain B, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|C Chain C, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|D Chain D, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|E Chain E, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|F Chain F, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|G Chain G, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|H Chain H, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|I Chain I, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|J Chain J, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|K Chain K, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1M|L Chain L, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
Obtained After Soaking Apo-Bfr Crystals For 2.5 Minutes
In Fe2+ (2.5m Fe(Ii)-Bfr)
pdb|3E1N|A Chain A, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|B Chain B, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|C Chain C, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|D Chain D, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|E Chain E, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|F Chain F, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|G Chain G, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|H Chain H, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|I Chain I, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|J Chain J, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|K Chain K, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1N|L Chain L, Crystal Structure Of E. Coli Bacterioferritin (Bfr)
After A 65 Minute (Aerobic) Exposure To Fe(Ii)
Revealing A Possible Mu-Oxo BridgeMU-Hydroxy Bridged
Diiron Intermediate At The Ferroxidase Centre.
(Fe(Iii)-O-Fe(Iii)- Bfr).
pdb|3E1O|A Chain A, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|B Chain B, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|C Chain C, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|D Chain D, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|E Chain E, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|F Chain F, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|G Chain G, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|H Chain H, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|I Chain I, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|J Chain J, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|K Chain K, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1O|L Chain L, Crystal Structure Of E. Coli Bacterioferritin (Bfr) With
Two Zn(Ii) Ion Sites At The Ferroxidase Centre
(Zn-Bfr).
pdb|3E1P|A Chain A, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|B Chain B, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|C Chain C, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|D Chain D, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|E Chain E, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|F Chain F, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|G Chain G, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|H Chain H, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|I Chain I, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|J Chain J, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|K Chain K, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|3E1P|L Chain L, Crystal Structure Of E. Coli Bacterioferritin (Bfr) In
Which The Ferroxidase Centre Is Inhibited With Zn(Ii)
And High Occupancy Iron Is Bound Within The Cavity.
pdb|2Y3Q|A Chain A, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|B Chain B, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|C Chain C, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|D Chain D, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|E Chain E, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|F Chain F, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|G Chain G, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|H Chain H, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|I Chain I, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|J Chain J, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|K Chain K, 1.55a Structure Of Apo Bacterioferritin From E. Coli
pdb|2Y3Q|L Chain L, 1.55a Structure Of Apo Bacterioferritin From E. Coli
Length = 158
Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 35 KSPDDVKRHYDRLVEDLIFIESAQFPLPNYKNTGNNCIG 73
+S D++K H DR +E ++F+E LPN ++ G IG
Sbjct: 47 ESIDEMK-HADRYIERILFLEG----LPNLQDLGKLNIG 80
>pdb|2B0T|A Chain A, Structure Of Monomeric Nadp Isocitrate Dehydrogenase
pdb|3MBC|A Chain A, Crystal Structure Of Monomeric Isocitrate Dehydrogenase
From Corynebacterium Glutamicum In Complex With Nadp
pdb|3MBC|B Chain B, Crystal Structure Of Monomeric Isocitrate Dehydrogenase
From Corynebacterium Glutamicum In Complex With Nadp
Length = 738
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 10/54 (18%)
Query: 32 GGGKSPDDVKR-------HYDRLVEDLIFIESAQFPLPNYKNTGNNCIGILADA 78
GG +P V++ +D L E L ES + L N GN G+LADA
Sbjct: 578 AGGSAPKHVQQVQEENHLRWDSLGEFLALAESFRHEL---NNNGNTKAGVLADA 628
>pdb|1HKC|A Chain A, Recombinant Human Hexokinase Type I Complexed With Glucose
And Phosphate
pdb|1QHA|A Chain A, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
pdb|1QHA|B Chain B, Human Hexokinase Type I Complexed With Atp Analogue
Amp-Pnp
Length = 917
Score = 25.8 bits (55), Expect = 5.8, Method: Composition-based stats.
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 30 AVGGGKSPDDVKRHYDRLVED 50
A G DD++ HYDRLV +
Sbjct: 711 AFGDNGCLDDIRTHYDRLVNE 731
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 25.8 bits (55), Expect = 6.8, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 4 EQNKKFERALAVYDKDTPDRWQNVARAVG----GGKSPDDVKRHYDRLVEDLIFIESAQF 59
E+ K F L KD N +A+G G + +D++ +D V LI I A
Sbjct: 100 EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVL 159
Query: 60 PLPNYKNTGN 69
P+ KN+G+
Sbjct: 160 PIFQAKNSGD 169
>pdb|2FKZ|A Chain A, Reduced (All Ferrous) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FKZ|B Chain B, Reduced (All Ferrous) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FKZ|C Chain C, Reduced (All Ferrous) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FKZ|D Chain D, Reduced (All Ferrous) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FKZ|E Chain E, Reduced (All Ferrous) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FKZ|F Chain F, Reduced (All Ferrous) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FKZ|G Chain G, Reduced (All Ferrous) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FKZ|H Chain H, Reduced (All Ferrous) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FL0|A Chain A, Oxidized (All Ferric) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FL0|B Chain B, Oxidized (All Ferric) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FL0|C Chain C, Oxidized (All Ferric) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FL0|D Chain D, Oxidized (All Ferric) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FL0|E Chain E, Oxidized (All Ferric) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FL0|F Chain F, Oxidized (All Ferric) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FL0|G Chain G, Oxidized (All Ferric) Form Of The Azotobacter Vinelandii
Bacterioferritin
pdb|2FL0|H Chain H, Oxidized (All Ferric) Form Of The Azotobacter Vinelandii
Bacterioferritin
Length = 155
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 35 KSPDDVKRHYDRLVEDLIFIESAQFPLPNYKNTGNNCIG 73
+S D++K H D+L++ ++F+E LPN + G IG
Sbjct: 47 ESIDEMK-HADKLIKRILFLEG----LPNLQELGKLLIG 80
>pdb|1SOF|A Chain A, Crystal Structure Of The Azotobacter Vinelandii
Bacterioferritin At 2.6 A Resolution
pdb|1SOF|B Chain B, Crystal Structure Of The Azotobacter Vinelandii
Bacterioferritin At 2.6 A Resolution
pdb|1SOF|C Chain C, Crystal Structure Of The Azotobacter Vinelandii
Bacterioferritin At 2.6 A Resolution
pdb|1SOF|D Chain D, Crystal Structure Of The Azotobacter Vinelandii
Bacterioferritin At 2.6 A Resolution
pdb|1SOF|E Chain E, Crystal Structure Of The Azotobacter Vinelandii
Bacterioferritin At 2.6 A Resolution
pdb|1SOF|F Chain F, Crystal Structure Of The Azotobacter Vinelandii
Bacterioferritin At 2.6 A Resolution
pdb|1SOF|G Chain G, Crystal Structure Of The Azotobacter Vinelandii
Bacterioferritin At 2.6 A Resolution
pdb|1SOF|H Chain H, Crystal Structure Of The Azotobacter Vinelandii
Bacterioferritin At 2.6 A Resolution
Length = 156
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 35 KSPDDVKRHYDRLVEDLIFIESAQFPLPNYKNTGNNCIG 73
+S D++K H D+L++ ++F+E LPN + G IG
Sbjct: 47 ESIDEMK-HADKLIKRILFLEG----LPNLQELGKLLIG 80
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,965,329
Number of Sequences: 62578
Number of extensions: 111057
Number of successful extensions: 292
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 281
Number of HSP's gapped (non-prelim): 23
length of query: 87
length of database: 14,973,337
effective HSP length: 55
effective length of query: 32
effective length of database: 11,531,547
effective search space: 369009504
effective search space used: 369009504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 45 (21.9 bits)