Query 034678
Match_columns 87
No_of_seqs 102 out of 123
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 08:26:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ki9_A Cannabinoid receptor 2; 32.1 5.9 0.0002 19.8 -0.8 9 78-86 13-21 (33)
2 1f35_A Olfactory marker protei 15.3 34 0.0012 24.1 0.1 10 73-82 132-141 (162)
3 1kpt_A KP4 toxin; killer toxin 12.1 86 0.003 20.5 1.3 14 12-26 66-79 (105)
4 1i7w_B E-cadherin, epithelial- 10.9 48 0.0016 22.9 -0.3 8 79-86 129-136 (151)
5 4gac_A Alcohol dehydrogenase [ 10.0 1.5E+02 0.0053 21.0 2.2 17 10-26 140-156 (324)
6 2l6m_A Protein dicer; DSRBD, h 9.8 86 0.0029 21.1 0.7 10 16-26 30-39 (121)
7 1us0_A Aldose reductase; oxido 9.6 1.6E+02 0.0055 21.1 2.2 18 10-27 139-156 (316)
8 1q55_A EP-cadherin, C-cadherin 9.6 65 0.0022 27.2 0.0 8 79-86 857-864 (880)
9 3ln3_A Dihydrodiol dehydrogena 9.1 1.6E+02 0.0056 21.0 2.0 17 10-26 146-162 (324)
10 3o3r_A Aldo-keto reductase fam 9.0 1.7E+02 0.0057 21.0 2.0 18 9-26 138-155 (316)
No 1
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=32.07 E-value=5.9 Score=19.83 Aligned_cols=9 Identities=44% Similarity=1.184 Sum_probs=7.2
Q ss_pred hheeecccC
Q 034678 78 VMYLSCWGP 86 (87)
Q Consensus 78 VMyLSCWGP 86 (87)
+.|+-||.|
T Consensus 13 ~~F~icW~P 21 (33)
T 2ki9_A 13 AVLLICWFP 21 (33)
T ss_dssp HHHTTTSSH
T ss_pred HHHHHHHhH
Confidence 458889988
No 2
>1f35_A Olfactory marker protein; beta, structural genomics, PSI, protein structure initiative northeast structural genomics consortium, NESG, signaling P; 2.30A {Mus musculus} SCOP: b.94.1.1 PDB: 1job_A 1jod_A 1jyt_A 1zri_A
Probab=15.29 E-value=34 Score=24.07 Aligned_cols=10 Identities=50% Similarity=0.873 Sum_probs=8.0
Q ss_pred hhhhhhheee
Q 034678 73 ESLRKVMYLS 82 (87)
Q Consensus 73 ESLR~VMyLS 82 (87)
...|||||+-
T Consensus 132 AkiRKVMYFl 141 (162)
T 1f35_A 132 AKIRKVMYFL 141 (162)
T ss_dssp HHHCSEEEEE
T ss_pred HHHHhheeEE
Confidence 4689999974
No 3
>1kpt_A KP4 toxin; killer toxin, virally encoded, single subunit, alpha/beta family, LEFT-handed crossover, fungal TOXI; 1.75A {Ustilago maydis} SCOP: d.70.1.1
Probab=12.14 E-value=86 Score=20.52 Aligned_cols=14 Identities=29% Similarity=0.439 Sum_probs=11.6
Q ss_pred HHHHHHhhhhccccc
Q 034678 12 AIGAVEALKDQGFAR 26 (87)
Q Consensus 12 ~vgaVealKDQG~cr 26 (87)
+...+++|.|+| ||
T Consensus 66 ~~~~~~~L~~hG-Ck 79 (105)
T 1kpt_A 66 ACRHLTNLVNHG-CR 79 (105)
T ss_dssp HHHHHHHHHHHT-CS
T ss_pred HHHHHHHHHhcC-cc
Confidence 478899999998 65
No 4
>1i7w_B E-cadherin, epithelial-cadherin; cell adhesion, beta-catenin, protein-protein complex, extended interface, armadillo repeat, phosphoserin; HET: SEP; 2.00A {Mus musculus} SCOP: j.71.1.1 PDB: 1i7x_B 3ifq_C*
Probab=10.85 E-value=48 Score=22.85 Aligned_cols=8 Identities=50% Similarity=1.107 Sum_probs=6.6
Q ss_pred heeecccC
Q 034678 79 MYLSCWGP 86 (87)
Q Consensus 79 MyLSCWGP 86 (87)
=||+-|||
T Consensus 129 d~L~~wGP 136 (151)
T 1i7w_B 129 DYLNEWGN 136 (151)
T ss_dssp CCTTTSCG
T ss_pred hhhcccch
Confidence 38888998
No 5
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=10.00 E-value=1.5e+02 Score=20.97 Aligned_cols=17 Identities=24% Similarity=0.370 Sum_probs=13.4
Q ss_pred HHHHHHHHhhhhccccc
Q 034678 10 VAAIGAVEALKDQGFAR 26 (87)
Q Consensus 10 vA~vgaVealKDQG~cr 26 (87)
.-++.++|.|+++|+.|
T Consensus 140 ~e~~~al~~l~~~Gkir 156 (324)
T 4gac_A 140 KETWKALEVLVAKGLVK 156 (324)
T ss_dssp HHHHHHHHHHHHTTSBS
T ss_pred HHHHHHHHHHHHCCCee
Confidence 34578999999998765
No 6
>2l6m_A Protein dicer; DSRBD, hydrolase; NMR {Schizosaccharomyces pombe}
Probab=9.80 E-value=86 Score=21.05 Aligned_cols=10 Identities=50% Similarity=0.717 Sum_probs=7.1
Q ss_pred HHhhhhccccc
Q 034678 16 VEALKDQGFAR 26 (87)
Q Consensus 16 VealKDQG~cr 26 (87)
-+-|+||| |.
T Consensus 30 ~Q~Lq~QG-C~ 39 (121)
T 2l6m_A 30 YQLLKDQG-CE 39 (121)
T ss_dssp HHHHTTTT-CC
T ss_pred HHHHHHhc-HH
Confidence 45688898 64
No 7
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=9.61 E-value=1.6e+02 Score=21.05 Aligned_cols=18 Identities=28% Similarity=0.462 Sum_probs=14.0
Q ss_pred HHHHHHHHhhhhcccccc
Q 034678 10 VAAIGAVEALKDQGFARW 27 (87)
Q Consensus 10 vA~vgaVealKDQG~crw 27 (87)
.-++.++|.|+++|++|.
T Consensus 139 ~e~~~ale~l~~~Gkir~ 156 (316)
T 1us0_A 139 LDTWAAMEELVDEGLVKA 156 (316)
T ss_dssp HHHHHHHHHHHHTTSBSC
T ss_pred HHHHHHHHHHHHCCCccE
Confidence 345789999999987664
No 8
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=9.57 E-value=65 Score=27.15 Aligned_cols=8 Identities=63% Similarity=1.240 Sum_probs=0.0
Q ss_pred heeecccC
Q 034678 79 MYLSCWGP 86 (87)
Q Consensus 79 MyLSCWGP 86 (87)
=||+.|||
T Consensus 857 d~L~~~gp 864 (880)
T 1q55_A 857 NYLSDWGS 864 (880)
T ss_dssp --------
T ss_pred hhhcccch
Confidence 38999998
No 9
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=9.08 E-value=1.6e+02 Score=21.04 Aligned_cols=17 Identities=18% Similarity=0.261 Sum_probs=13.4
Q ss_pred HHHHHHHHhhhhccccc
Q 034678 10 VAAIGAVEALKDQGFAR 26 (87)
Q Consensus 10 vA~vgaVealKDQG~cr 26 (87)
..++.++|.|+++|+.|
T Consensus 146 ~e~~~al~~l~~~Gkir 162 (324)
T 3ln3_A 146 CDTWERLEECXDAGLVX 162 (324)
T ss_dssp HHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHhcCCee
Confidence 44578899999998765
No 10
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=9.01 E-value=1.7e+02 Score=20.99 Aligned_cols=18 Identities=33% Similarity=0.540 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhccccc
Q 034678 9 IVAAIGAVEALKDQGFAR 26 (87)
Q Consensus 9 ~vA~vgaVealKDQG~cr 26 (87)
+..++.++|.|+++|+.|
T Consensus 138 ~~e~~~al~~l~~~Gkir 155 (316)
T 3o3r_A 138 FLDAWEGMEELVDQGLVK 155 (316)
T ss_dssp HHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHcCCCc
Done!