BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034688
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49901|ZDS_NARPS Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=ZDS1 PE=2 SV=1
Length = 574
Score = 158 bits (400), Expect = 9e-39, Method: Composition-based stats.
Identities = 72/82 (87%), Positives = 75/82 (91%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
MSTAVELLDQGHEVDIYE R FIGGKV SFV KRGNHIE+ LHVFFGCYNNLFRL KKVG
Sbjct: 77 MSTAVELLDQGHEVDIYESRQFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVG 136
Query: 61 ADENLLMKDHTHKFVNKGGEIG 82
ADENLL+KDHTH FVN+GGEIG
Sbjct: 137 ADENLLVKDHTHTFVNRGGEIG 158
>sp|Q9SMJ3|ZDS_CAPAN Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=ZDS PE=1 SV=1
Length = 588
Score = 154 bits (390), Expect = 1e-37, Method: Composition-based stats.
Identities = 70/82 (85%), Positives = 76/82 (92%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
MSTAVELLDQGHEVDIYE R+FIGGKV SFV KRGNHIE+ LHVFFGCYNNLFRL KKVG
Sbjct: 92 MSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKRGNHIEMGLHVFFGCYNNLFRLMKKVG 151
Query: 61 ADENLLMKDHTHKFVNKGGEIG 82
A++NLL+K+HTH FVNKGGEIG
Sbjct: 152 AEKNLLVKEHTHTFVNKGGEIG 173
>sp|Q9SE20|ZDS_SOLLC Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=ZDS PE=2 SV=1
Length = 588
Score = 153 bits (387), Expect = 3e-37, Method: Composition-based stats.
Identities = 69/82 (84%), Positives = 76/82 (92%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
MSTAVELLDQGHEVDIYE R+FIGGKV SFV +RGNHIE+ LHVFFGCYNNLFRL KKVG
Sbjct: 92 MSTAVELLDQGHEVDIYESRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLLKKVG 151
Query: 61 ADENLLMKDHTHKFVNKGGEIG 82
A++NLL+K+HTH FVNKGGEIG
Sbjct: 152 AEKNLLVKEHTHTFVNKGGEIG 173
>sp|Q9FV46|ZDS_TARER Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes
erecta PE=2 SV=1
Length = 587
Score = 152 bits (384), Expect = 6e-37, Method: Composition-based stats.
Identities = 68/82 (82%), Positives = 76/82 (92%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
MSTAVELLDQGHEVDIYE R+FIGGKV SFV K+GNHIE+ LHVFFGCYNNLFRL KKVG
Sbjct: 95 MSTAVELLDQGHEVDIYESRTFIGGKVGSFVDKQGNHIEMGLHVFFGCYNNLFRLLKKVG 154
Query: 61 ADENLLMKDHTHKFVNKGGEIG 82
A++NLL+KDHTH FVN+GGE+G
Sbjct: 155 AEKNLLVKDHTHTFVNRGGELG 176
>sp|Q38893|ZDS_ARATH Zeta-carotene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=ZDS1 PE=1 SV=3
Length = 558
Score = 148 bits (374), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/82 (80%), Positives = 74/82 (90%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
MSTAVELLDQGHEVDIY+ R+FIGGKV SFV +RGNHIE+ LHVFFGCYNNLFRL KKVG
Sbjct: 69 MSTAVELLDQGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYNNLFRLMKKVG 128
Query: 61 ADENLLMKDHTHKFVNKGGEIG 82
A++NLL+KDHTH F+NK G IG
Sbjct: 129 AEKNLLVKDHTHTFINKDGTIG 150
>sp|Q9ZTP4|ZDS_MAIZE Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays
GN=ZDS1 PE=2 SV=1
Length = 570
Score = 146 bits (369), Expect = 3e-35, Method: Composition-based stats.
Identities = 66/82 (80%), Positives = 73/82 (89%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
MSTAVELLDQGHEVD+YE R FIGGKV SFV ++GNHIE+ LHVFFGCY+NLFRL KKVG
Sbjct: 77 MSTAVELLDQGHEVDLYESRPFIGGKVGSFVDRQGNHIEMGLHVFFGCYSNLFRLMKKVG 136
Query: 61 ADENLLMKDHTHKFVNKGGEIG 82
AD NLL+K+HTH FVNKGG IG
Sbjct: 137 ADNNLLVKEHTHTFVNKGGTIG 158
>sp|P74306|ZDS_SYNY3 Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=crtQ PE=3 SV=1
Length = 489
Score = 127 bits (320), Expect = 2e-29, Method: Composition-based stats.
Identities = 57/82 (69%), Positives = 68/82 (82%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
M+TAVEL+D GHEV++YE RSFIGGKV S+V GNHIE+ LHVFFGCY NLF L +KVG
Sbjct: 13 MATAVELVDAGHEVELYEARSFIGGKVGSWVDGDGNHIEMGLHVFFGCYYNLFNLMEKVG 72
Query: 61 ADENLLMKDHTHKFVNKGGEIG 82
A +NL +K+HTH FVN+GG IG
Sbjct: 73 AKQNLRLKEHTHTFVNQGGRIG 94
>sp|Q31N27|ZDS_SYNE7 Probable zeta-carotene desaturase OS=Synechococcus elongatus
(strain PCC 7942) GN=zds PE=3 SV=1
Length = 481
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 48/78 (61%), Positives = 60/78 (76%)
Query: 5 VELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVGADEN 64
++L+D GH+V IY+ R F+GGKV S++ GNHIE+ LHVFF Y NLF L +KVGA EN
Sbjct: 17 IDLVDAGHQVAIYDSRPFVGGKVGSWIDADGNHIEMGLHVFFFNYANLFALMRKVGAFEN 76
Query: 65 LLMKDHTHKFVNKGGEIG 82
LL K HTH F+NKGGE+G
Sbjct: 77 LLPKAHTHTFINKGGEVG 94
>sp|Q9R6X4|ZDS_NOSS1 Zeta-carotene desaturase OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=crtQ PE=3 SV=2
Length = 479
Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
++TA++L D G EV I+E R F+GGKV S++ GNH+E+ LHVFFGCY LF L KVG
Sbjct: 13 LATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGCYYQLFELMNKVG 72
Query: 61 ADENLLMKDHTHKFVNKGGEIGGI 84
A +L +K+HTH FVNKGG G +
Sbjct: 73 AFSHLRLKEHTHTFVNKGGRTGAL 96
>sp|Q40406|CRTI_NARPS Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus
pseudonarcissus GN=PDS1 PE=1 SV=1
Length = 570
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
+STA L D GH+ + E R +GGK+A++ K G+ E LH+FFG Y N+ L ++G
Sbjct: 110 LSTAKYLADAGHKPILLESRDVLGGKIAAWKDKDGDWYETGLHIFFGAYPNVQNLFGELG 169
Query: 61 ADENLLMKDHTHKFV--NKGGE 80
++ L K+H+ F NK GE
Sbjct: 170 INDRLQWKEHSMIFAMPNKPGE 191
>sp|P80093|PDS_CAPAN 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum
annuum GN=PDS PE=1 SV=1
Length = 582
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
+STA L D GH+ + E R +GGKVA++ G+ E LH+FFG Y N+ L ++G
Sbjct: 123 LSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNMQNLFGELG 182
Query: 61 ADENLLMKDHTHKFV--NKGGE 80
++ L K+H+ F NK GE
Sbjct: 183 INDRLQWKEHSMIFAMPNKPGE 204
>sp|Q0DUI8|CRTI_ORYSJ Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. japonica GN=PDS PE=2 SV=2
Length = 578
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
+STA L D GH+ + E R +GGK+A++ + G+ E LH+FFG Y N+ L ++G
Sbjct: 117 LSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELG 176
Query: 61 ADENLLMKDHTHKFV--NKGGE 80
++ L K+H+ F NK GE
Sbjct: 177 INDRLQWKEHSMIFAMPNKPGE 198
>sp|A2XDA1|CRTI_ORYSI Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa
subsp. indica GN=PDS1 PE=2 SV=2
Length = 578
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
+STA L D GH+ + E R +GGK+A++ + G+ E LH+FFG Y N+ L ++G
Sbjct: 117 LSTAKYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELG 176
Query: 61 ADENLLMKDHTHKFV--NKGGE 80
++ L K+H+ F NK GE
Sbjct: 177 INDRLQWKEHSMIFAMPNKPGE 198
>sp|P26294|PDS_SYNE7 15-cis-phytoene desaturase OS=Synechococcus elongatus (strain PCC
7942) GN=pds PE=1 SV=1
Length = 474
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
+S A L D GH +YE R +GGKVA++ + G+ E LH+FFG Y N+ +L K++
Sbjct: 13 LSCAKYLADAGHTPIVYERRDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNMLQLFKELN 72
Query: 61 ADENLLMKDHTHKF 74
++ L K H+ F
Sbjct: 73 IEDRLQWKSHSMIF 86
>sp|P28553|CRTI_SOYBN Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max
GN=PDS1 PE=2 SV=1
Length = 570
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
+STA L D GH+ + E R +GGKVA++ K G+ E LH+FFG Y + L ++G
Sbjct: 111 LSTAKYLADAGHKPILLEARDVLGGKVAAWKDKDGDWYETGLHIFFGAYPYVQNLFGELG 170
Query: 61 ADENLLMKDHTHKFV--NKGGE 80
++ L K+H+ F NK GE
Sbjct: 171 INDRLQWKEHSMIFAMPNKPGE 192
>sp|P28554|CRTI_SOLLC Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum
lycopersicum GN=PDS PE=2 SV=1
Length = 583
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
+STA L D GH+ + E R +GGKVA++ G+ E LH+FFG Y N+ L ++G
Sbjct: 124 LSTAKYLADAGHKPILLEARDVLGGKVAAWKDDDGDWYETGLHIFFGAYPNIQNLFGELG 183
Query: 61 ADENLLMKDHTHKFV--NKGGE 80
++ L K+H+ F +K GE
Sbjct: 184 INDRLQWKEHSMIFAMPSKPGE 205
>sp|Q07356|PDS_ARATH 15-cis-phytoene desaturase, chloroplastic/chromoplastic
OS=Arabidopsis thaliana GN=PDS PE=1 SV=1
Length = 566
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
+STA L D GH+ + E R +GGK+A++ + G+ E LH+FFG Y N+ L ++G
Sbjct: 105 LSTAKYLADAGHKPLLLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELG 164
Query: 61 ADENLLMKDHTHKFV--NKGGE 80
++ L K+H+ F +K GE
Sbjct: 165 INDRLQWKEHSMIFAMPSKPGE 186
>sp|P49086|CRTI_MAIZE Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays
GN=PDS1 PE=2 SV=1
Length = 571
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
+STA L D GH+ + E R +GGKVA++ + G+ E LH+FFG Y N+ L ++
Sbjct: 109 LSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELR 168
Query: 61 ADENLLMKDHTHKFV--NKGGE 80
++ L K+H+ F NK GE
Sbjct: 169 IEDRLQWKEHSMIFAMPNKPGE 190
>sp|P29273|CRTI_SYNY3 Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=pds PE=3 SV=2
Length = 472
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 1 MSTAVELLDQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFRLTKKVG 60
++ A L D G + E R +GGK+A++ + G+ E LH+FFG Y N+ +L K++
Sbjct: 13 LACAKYLADAGFTPVVLERRDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNMLQLFKELD 72
Query: 61 ADENLLMKDHTHKF 74
++ L K+H+ F
Sbjct: 73 IEDRLQWKEHSMIF 86
>sp|P86810|OXLA_SIGCA L-amino-acid oxidase OS=Siganus canaliculatus PE=1 SV=2
Length = 527
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 3 TAVELL-DQGHEVDIYELRSFIGGKVASFVCKRGNHIEISLHVFFGCYNNLFR-LTKKVG 60
TA +LL D GH V I E S IGG+V ++ K + +++FR K +G
Sbjct: 74 TAAKLLQDAGHRVTIVEANSRIGGRVETYRNKEEGWYADLGAMRIPSDHSIFRWFAKTLG 133
Query: 61 ADEN-LLMKDH-THKFVN 76
N +M DH T FVN
Sbjct: 134 VKLNPFIMDDHNTFYFVN 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.142 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,029,839
Number of Sequences: 539616
Number of extensions: 1160155
Number of successful extensions: 2435
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2416
Number of HSP's gapped (non-prelim): 20
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)