BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034694
MNMGGAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLRACSEPP
PSKTSEFSADGGGQGDSGGSQAKGQND

High Scoring Gene Products

Symbol, full name Information P value
AT1G27435 protein from Arabidopsis thaliana 4.3e-22

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034694
        (87 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006150 - symbol:AT1G27435 "AT1G27435" speci...   257  4.3e-22   1


>TAIR|locus:505006150 [details] [associations]
            symbol:AT1G27435 "AT1G27435" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
            UniGene:At.19289 EMBL:AF386937 EMBL:BT001169 EMBL:AK118536
            IPI:IPI00548150 RefSeq:NP_564283.1 STRING:Q94F28 PaxDb:Q94F28
            PRIDE:Q94F28 EnsemblPlants:AT1G27435.1 GeneID:839634
            KEGG:ath:AT1G27435 TAIR:At1g27435 eggNOG:NOG325612
            HOGENOM:HOG000090300 InParanoid:Q94F28 OMA:WGTRVME PhylomeDB:Q94F28
            ProtClustDB:CLSN2688016 Genevestigator:Q94F28 Uniprot:Q94F28
        Length = 81

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 48/54 (88%), Positives = 50/54 (92%)

Query:     5 GAFWGTRVMEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLRACSE 58
             GAFWGTRVME+VKKHDSGGL+WKRIKLT TRKANAK RL RVWQNEAVLRAC E
Sbjct:     6 GAFWGTRVMELVKKHDSGGLLWKRIKLTPTRKANAKTRLRRVWQNEAVLRACGE 59


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.130   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       87        69   0.00091  102 3  11 22  0.47    28
                                                     29  0.39    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  550 (59 KB)
  Total size of DFA:  105 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.81u 0.13s 8.94t   Elapsed:  00:00:01
  Total cpu time:  8.81u 0.13s 8.94t   Elapsed:  00:00:01
  Start:  Thu May  9 23:17:57 2013   End:  Thu May  9 23:17:58 2013

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