BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034696
(86 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q43307|PLSB_ARATH Glycerol-3-phosphate acyltransferase, chloroplastic OS=Arabidopsis
thaliana GN=ATS1 PE=1 SV=2
Length = 459
Score = 115 bits (288), Expect = 7e-26, Method: Composition-based stats.
Identities = 46/68 (67%), Positives = 59/68 (86%)
Query: 1 MRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFADII 60
MRRL EHSG PGHIYP++LLC+DIMPPPPQVE+E+GEKR++ FHG GLS+APEI+F+D+
Sbjct: 348 MRRLVEHSGAPGHIYPMSLLCYDIMPPPPQVEKEIGEKRLVGFHGTGLSIAPEINFSDVT 407
Query: 61 TASKNPEE 68
++P E
Sbjct: 408 ADCESPNE 415
>sp|P10349|PLSB_CUCMO Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucurbita
moschata PE=1 SV=1
Length = 396
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 60/69 (86%)
Query: 1 MRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFADII 60
MRRL +HS +PGH++PLALLCHDIMPPP QVE E+GEKRVI+F+GAGLSVAPEISF +I
Sbjct: 286 MRRLIQHSDVPGHLFPLALLCHDIMPPPSQVEIEIGEKRVIAFNGAGLSVAPEISFEEIA 345
Query: 61 TASKNPEEV 69
KNPEEV
Sbjct: 346 ATHKNPEEV 354
>sp|Q43869|PLSB_SPIOL Glycerol-3-phosphate acyltransferase, chloroplastic OS=Spinacia
oleracea GN=GAT PE=1 SV=1
Length = 472
Score = 112 bits (281), Expect = 6e-25, Method: Composition-based stats.
Identities = 48/68 (70%), Positives = 57/68 (83%)
Query: 1 MRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFADII 60
MRRL EH+G PGHIYPLALLC+DIMPPP QVE+E+GEKRV+SFHG G+SV PEI++ D+
Sbjct: 360 MRRLVEHAGRPGHIYPLALLCYDIMPPPAQVEKEIGEKRVMSFHGVGVSVEPEINYNDVS 419
Query: 61 TASKNPEE 68
KN EE
Sbjct: 420 LGCKNDEE 427
>sp|Q43822|PLSB_PHAVU Glycerol-3-phosphate acyltransferase, chloroplastic OS=Phaseolus
vulgaris GN=PLSB PE=2 SV=1
Length = 461
Score = 111 bits (278), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 1 MRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFADII 60
MRRL EHSG PGH+YPLA+LCHDIMPPP +VE+E+GEKR+I FHGAG+SVAP ISF++
Sbjct: 350 MRRLVEHSGPPGHVYPLAILCHDIMPPPLKVEKEIGEKRIICFHGAGISVAPAISFSETT 409
Query: 61 TASKNPEEVGWVIT 74
+NPE+ V +
Sbjct: 410 ATCENPEKAKEVFS 423
>sp|P30706|PLSB_PEA Glycerol-3-phosphate acyltransferase, chloroplastic OS=Pisum
sativum GN=GPAT PE=1 SV=1
Length = 457
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 60/74 (81%)
Query: 1 MRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFADII 60
MRRL +HSG PGHIYPLA+LCHDIMPPP +VE+E+GEKR+IS+HG G+S APEISF++
Sbjct: 346 MRRLVDHSGPPGHIYPLAILCHDIMPPPLKVEKEIGEKRIISYHGTGISTAPEISFSNTT 405
Query: 61 TASKNPEEVGWVIT 74
A +NPE+ T
Sbjct: 406 AACENPEKAKDAYT 419
>sp|Q39639|PLSB_CUCSA Glycerol-3-phosphate acyltransferase, chloroplastic OS=Cucumis
sativus PE=2 SV=1
Length = 470
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 58/69 (84%)
Query: 1 MRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFADII 60
MRRL +HSG PGH+YPLALLC+DIMPPP QVE E+GEKRVISF+G GLSV PEISF +I
Sbjct: 359 MRRLLQHSGAPGHLYPLALLCYDIMPPPSQVEIEIGEKRVISFNGTGLSVGPEISFDEIA 418
Query: 61 TASKNPEEV 69
+ NP+EV
Sbjct: 419 ASRDNPDEV 427
>sp|Q42713|PLSB_CARTI Glycerol-3-phosphate acyltransferase, chloroplastic OS=Carthamus
tinctorius PE=2 SV=1
Length = 463
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 57/69 (82%)
Query: 1 MRRLAEHSGIPGHIYPLALLCHDIMPPPPQVEREVGEKRVISFHGAGLSVAPEISFADII 60
MRRL +H+G+ GHIYPLA+LCHDIMPPP QVE+E+GEK ISFHG G+SVAPEI+F ++
Sbjct: 349 MRRLVDHAGLVGHIYPLAILCHDIMPPPLQVEKEIGEKSWISFHGTGISVAPEINFQEVT 408
Query: 61 TASKNPEEV 69
+ +PEE
Sbjct: 409 ASCGSPEEA 417
>sp|Q3SRU9|LIPB_NITWN Octanoyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 /
ATCC 25391) GN=lipB PE=3 SV=1
Length = 231
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Query: 38 KRVISFHGAGLSVAPEIS-FADII 60
+R +SFHG L+V P++S FADI+
Sbjct: 168 RRWVSFHGVSLNVDPDLSHFADIV 191
>sp|Q5N180|LIPB_SYNP6 Octanoyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=lipB PE=3 SV=1
Length = 233
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 38 KRVISFHGAGLSVAPEIS-FADIITASKNPEEVGWVITFCSCISLFIV 84
R IS HG L+V P+++ F I+ + VG ++ FC + L +V
Sbjct: 149 SRWISLHGFALNVCPDLAGFEAIVPCGISDRAVGSLVEFCPDVRLEVV 196
>sp|Q31KN6|LIPB_SYNE7 Octanoyltransferase OS=Synechococcus elongatus (strain PCC 7942)
GN=lipB PE=3 SV=1
Length = 233
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 38 KRVISFHGAGLSVAPEIS-FADIITASKNPEEVGWVITFCSCISLFIV 84
R IS HG L+V P+++ F I+ + VG ++ FC + L +V
Sbjct: 149 SRWISLHGFALNVCPDLAGFEAIVPCGISDRAVGSLVEFCPDVRLEVV 196
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.142 0.463
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,557,610
Number of Sequences: 539616
Number of extensions: 1379425
Number of successful extensions: 4185
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4178
Number of HSP's gapped (non-prelim): 10
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)