BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034697
(86 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58FS3|RAD_ANTMA Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1
SV=1
Length = 93
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 62/78 (79%)
Query: 6 MTSSRSSGSSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDI 65
M S+R SG W+ K+NK FE ALA YDKDTPDRW NVA+AV G+T E+VKKHYE+LV+DI
Sbjct: 1 MASTRGSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDI 60
Query: 66 NDIEAGRYPHPNYRSTTG 83
IE+G+ P PNYR+T G
Sbjct: 61 KYIESGKVPFPNYRTTGG 78
>sp|Q6NNN0|RADL3_ARATH Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1
Length = 81
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 58/65 (89%)
Query: 16 WTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDINDIEAGRYPH 75
WT K+NK FE ALA YD+DTPDRW NVA+AV GK+ E+V++HYELL++D+NDIE+GRYPH
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRYPH 71
Query: 76 PNYRS 80
PNYRS
Sbjct: 72 PNYRS 76
>sp|Q1A173|RADL6_ARATH Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1
Length = 97
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 63/80 (78%), Gaps = 4/80 (5%)
Query: 1 MASNTMTSSRSSGSSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYEL 60
MASN SRSS S WT QNK FE ALA YDKDTPDRW NVAKAV GKTVE+VK+HY++
Sbjct: 1 MASN----SRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDI 56
Query: 61 LVKDINDIEAGRYPHPNYRS 80
LV+D+ +IE GR P PNY++
Sbjct: 57 LVEDLINIETGRVPLPNYKT 76
>sp|F4JVB8|RADL1_ARATH Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1
Length = 100
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 55/71 (77%)
Query: 16 WTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDINDIEAGRYPH 75
WT KQNK FE ALA YD+DTP+RW NVAK V GKT E+VK+HYELLV+DIN IE G P
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPF 73
Query: 76 PNYRSTTGTGN 86
PNYR++ G N
Sbjct: 74 PNYRTSGGCTN 84
>sp|Q9SIJ5|RADL2_ARATH Protein RADIALIS-like 2 OS=Arabidopsis thaliana GN=RL2 PE=2 SV=1
Length = 101
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 55/71 (77%)
Query: 16 WTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDINDIEAGRYPH 75
WTVKQNK FE ALA YD+DTPDRW NVA+AV GKT E+ K+ Y+LLV+DI IE G P
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73
Query: 76 PNYRSTTGTGN 86
P+Y++TTG N
Sbjct: 74 PDYKTTTGNSN 84
>sp|Q1G3C4|RADL4_ARATH Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN=RL4 PE=2 SV=1
Length = 77
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 55/63 (87%)
Query: 19 KQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDINDIEAGRYPHPNY 78
+++KQFE ALA +DKDTPDRW +A+AV GK+ E+VK+HYELL++D+NDIE+GRYP P Y
Sbjct: 14 REDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRY 73
Query: 79 RST 81
R+T
Sbjct: 74 RNT 76
>sp|Q8GW75|RADL5_ARATH Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN=RL5 PE=3 SV=1
Length = 100
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 19 KQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDINDIEAGRYPHPNY 78
KQNK FE ALA YDKDTPDRW NVAKAV K+ E+VK+HY++LV+D+ +IE P P Y
Sbjct: 15 KQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKY 74
Query: 79 RST 81
++
Sbjct: 75 KTV 77
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus
GN=DIVARICATA PE=2 SV=1
Length = 307
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 6 MTSSRSSGSSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDI 65
+ SRS+ + WT +NK FE ALA +D++TP+RW+ VA+ V GKTV DV + Y+ L D+
Sbjct: 17 LEESRST-TRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDV 75
Query: 66 NDIEAGRYPHPNYRSTT 82
+ IEAG P P Y +++
Sbjct: 76 SSIEAGFVPVPGYSTSS 92
>sp|Q4R8H2|DNJC2_MACFA DnaJ homolog subfamily C member 2 OS=Macaca fascicularis GN=DNAJC2
PE=2 SV=1
Length = 621
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 2 ASNTMTSSRSSG-----SSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKK 56
A N S R G + WT ++ K E AL Y +TP+RW+ +A+AV G+T +D K
Sbjct: 535 ADNAAPSERFEGPYTDFTPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMK 594
Query: 57 HYELLVKDINDIEAGR 72
Y+ LV+ + +A +
Sbjct: 595 RYKELVEMVKAKKAAQ 610
>sp|Q99543|DNJC2_HUMAN DnaJ homolog subfamily C member 2 OS=Homo sapiens GN=DNAJC2 PE=1
SV=4
Length = 621
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 2 ASNTMTSSRSSG-----SSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKK 56
A N S R G + WT ++ K E AL Y +TP+RW+ +A+AV G+T +D K
Sbjct: 535 ADNATPSERFEGPYTDFTPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMK 594
Query: 57 HYELLVKDINDIEAGR 72
Y+ LV+ + +A +
Sbjct: 595 RYKELVEMVKAKKAAQ 610
>sp|Q1RMH9|DNJC2_BOVIN DnaJ homolog subfamily C member 2 OS=Bos taurus GN=DNAJC2 PE=2 SV=1
Length = 621
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 2 ASNTMTSSRSSG-----SSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKK 56
A N S R G + WT ++ K E AL Y +TP+RW+ +A+AV G+T +D K
Sbjct: 535 ADNATPSERFEGPCTDFTPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMK 594
Query: 57 HYELLVKDINDIEAGR 72
Y+ LV+ + +A +
Sbjct: 595 RYKELVEMVKAKKAAQ 610
>sp|Q61712|DNJC1_MOUSE DnaJ homolog subfamily C member 1 OS=Mus musculus GN=Dnajc1 PE=1
SV=1
Length = 552
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 9 SRSSGSSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVK 63
+R++ +WT Q K E AL Y K DRWD +AK V K+ ED Y+LLV+
Sbjct: 488 TRAAEEAWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLVE 542
>sp|P54103|DNJC2_MOUSE DnaJ homolog subfamily C member 2 OS=Mus musculus GN=Dnajc2 PE=1
SV=2
Length = 621
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 16 WTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDINDIEAGR 72
WT ++ K E AL Y +TP+RW+ +A+AV G+T +D + Y+ LV+ + +A +
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQ 610
>sp|Q7TQ20|DNJC2_RAT DnaJ homolog subfamily C member 2 OS=Rattus norvegicus GN=Dnajc2
PE=2 SV=1
Length = 621
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 16 WTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDINDIEAGR 72
WT ++ K E AL Y +TP+RW+ +A+AV G+T +D + Y+ LV+ + +A +
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQ 610
>sp|Q96KC8|DNJC1_HUMAN DnaJ homolog subfamily C member 1 OS=Homo sapiens GN=DNAJC1 PE=1
SV=1
Length = 554
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 9 SRSSGSSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVK 63
+RS+ WT Q K E AL Y + + DRWD +A+ V K+ ED Y+LLV+
Sbjct: 490 ARSAEEPWTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLVE 544
>sp|Q6P2Y3|DNJC2_XENTR DnaJ homolog subfamily C member 2 OS=Xenopus tropicalis GN=dnajc2
PE=2 SV=2
Length = 620
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 4 NTMTSSRSSG-----SSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHY 58
N + S R G S WT ++ K E AL Y +TP+RW+ +A+AV G++ +D K Y
Sbjct: 536 NAVPSERFEGPAADMSPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRY 595
Query: 59 ELLVKDINDIEAGR 72
+ LV+ + +A +
Sbjct: 596 KELVEMVKAKKAAQ 609
>sp|Q6NWJ4|DNJC2_DANRE DnaJ homolog subfamily C member 2 OS=Danio rerio GN=dnajc2 PE=2
SV=1
Length = 618
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 4 NTMTSSR-------SSGSSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKK 56
N M S R S+ ++WT ++ K E AL Y T +RW+ +++AV G++ +D K
Sbjct: 534 NAMPSERFDAVGADSNAAAWTTEEQKLLEQALKTYPVSTAERWERISEAVPGRSKKDCMK 593
Query: 57 HYELLVKDINDIEAGR 72
Y+ LV+ I +A +
Sbjct: 594 RYKELVEMIKAKKAAQ 609
>sp|P34454|YMA9_CAEEL Uncharacterized protein F54F2.9 OS=Caenorhabditis elegans
GN=F54F2.9 PE=4 SV=3
Length = 414
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 12 SGSSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDI 65
S W+ + K FETAL Y K T +RW+ +++ + KT + V ++ L + I
Sbjct: 353 SEDDWSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQVMVRFKQLAEMI 406
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 15 SWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKH---YELLVKDINDIEAG 71
+WT +++++F AL +D+D W + V KTV ++ H Y + V+ N E
Sbjct: 43 NWTDEEHQKFLEALTLFDRD----WKKIESFVGSKTVIQIRSHAQKYFIKVQKNNTGERI 98
Query: 72 RYPHPNYRS 80
P P +S
Sbjct: 99 PPPRPKRKS 107
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 5 TMTSSRSSGSSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKH 57
T+T SR + WT +++ +F AL +D+D W + V KTV ++ H
Sbjct: 56 TITKSREN---WTEQEHDKFLEALHLFDRD----WKKIKAFVGSKTVIQIRSH 101
>sp|Q97BG8|DNAK_THEVO Chaperone protein DnaK OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=dnaK PE=3
SV=1
Length = 613
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 32 DKDTPDRW----DNVAKAVSGKTVEDVKKHYELLVKDINDIEAGRYPHPNYRSTTGTGN 86
DK+T DR ++ KA+ K +++VK E + KDI ++ Y + + TG+GN
Sbjct: 535 DKETKDRILSEVKDLRKAIEEKNMDNVKTLMEKISKDIQEVGTKMYQSASSTTQTGSGN 593
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 7 TSSRSSGSSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKH 57
T S WT+++ + FE LA + + RW ++K + +TV VK +
Sbjct: 112 TKPASYSVKWTIEEKELFEQGLAKFGR----RWTKISKLIGSRTVLQVKSY 158
>sp|Q6P0N0|M18BP_HUMAN Mis18-binding protein 1 OS=Homo sapiens GN=MIS18BP1 PE=1 SV=1
Length = 1132
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 16 WTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHY 58
W K+ ++ A A K P W VA AV ++ E+ ++ Y
Sbjct: 880 WNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKY 922
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 14 SSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDINDIE 69
++WT + QF A Y +D DN+A+ V GK+ E+V ++ + + N+++
Sbjct: 858 TNWTKRDFNQFIKANEKYGRDD---IDNIAREVEGKSPEEVMEYSAVFWERCNELQ 910
>sp|Q80WQ8|M18BP_MOUSE Mis18-binding protein 1 OS=Mus musculus GN=Mis18bp1 PE=1 SV=1
Length = 998
Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 16 WTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHY 58
W+ ++ ++ A K P W +VA AV +T ++ +K Y
Sbjct: 746 WSEQELQKLHCAFTSLPKHKPGFWSDVAMAVGSRTADECQKKY 788
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 14 SSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKHYELLVKDINDIE 69
++WT + QF A Y +D DN+A+ V GK+ E+V ++ + + N+++
Sbjct: 850 TNWTKRDFNQFIKANEKYGRDD---IDNIAREVEGKSPEEVMEYSAVFWERCNELQ 902
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 7 TSSRSSGSSWTVKQNKQFETALAFYDKDTPDRWDNVAKAVSGKTVEDVKKH 57
T S ++ SSWT ++ + F A YDKD + + V KT+ V+ H
Sbjct: 144 TISGATRSSWTKEEERLFVEAYKLYDKDN----KKIQEHVKTKTILQVRSH 190
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.123 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,468,500
Number of Sequences: 539616
Number of extensions: 1166824
Number of successful extensions: 2667
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2637
Number of HSP's gapped (non-prelim): 53
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)