Query 034713
Match_columns 86
No_of_seqs 121 out of 1084
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 09:04:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034713.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034713hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2aak_A UBC1, ubiquitin conjuga 100.0 7.2E-35 2.4E-39 185.2 10.3 86 1-86 67-152 (152)
2 4gpr_A Ubiquitin-conjugating e 100.0 1.3E-34 4.6E-39 183.8 10.3 84 1-84 67-150 (151)
3 2r0j_A Ubiquitin carrier prote 100.0 1.8E-34 6.2E-39 182.9 9.7 85 1-85 64-148 (149)
4 2c2v_B Ubiquitin-conjugating e 100.0 8.9E-35 3E-39 185.2 7.8 85 1-85 68-152 (154)
5 1ayz_A UBC2, ubiquitin-conjuga 100.0 3.1E-34 1.1E-38 185.2 10.4 84 1-84 67-150 (169)
6 1z2u_A Ubiquitin-conjugating e 100.0 4.2E-34 1.4E-38 181.3 10.3 84 1-84 67-150 (150)
7 2ayv_A Ubiquitin-conjugating e 100.0 4.4E-34 1.5E-38 184.0 10.4 83 1-83 84-166 (166)
8 2c4o_A Ubiquitin-conjugating e 100.0 5.8E-34 2E-38 183.3 10.3 84 1-84 82-165 (165)
9 1jat_A Ubiquitin-conjugating e 100.0 2.6E-34 8.8E-39 183.1 8.5 86 1-86 68-153 (155)
10 1wzv_A Ubiquitin-conjugating e 100.0 5.7E-34 2E-38 181.5 10.1 86 1-86 67-153 (155)
11 1fxt_A Ubiquitin-conjugating e 100.0 2.6E-34 8.7E-39 182.1 7.5 84 1-84 65-149 (149)
12 2bep_A Ubiquitin-conjugating e 100.0 1.1E-33 3.8E-38 180.8 10.4 85 1-85 74-159 (159)
13 3h8k_A Ubiquitin-conjugating e 100.0 1.4E-33 4.8E-38 181.0 10.6 84 1-84 67-163 (164)
14 1yh2_A HSPC150 protein similar 100.0 1.4E-33 4.8E-38 182.0 10.6 85 1-85 67-155 (169)
15 1zdn_A Ubiquitin-conjugating e 100.0 4.7E-34 1.6E-38 182.5 8.1 83 1-83 76-158 (158)
16 2e2c_A Ubiquitin conjugating e 100.0 1.8E-33 6E-38 179.4 10.0 84 1-85 72-155 (156)
17 2f4z_A Tgtwinscan_2721 - E2 do 100.0 2.1E-33 7E-38 184.6 10.3 85 1-85 108-193 (193)
18 3k9o_A Ubiquitin-conjugating e 100.0 2.5E-33 8.5E-38 184.9 10.6 85 1-85 71-156 (201)
19 2ucz_A UBC7, ubiquitin conjuga 100.0 1.6E-33 5.6E-38 180.9 9.4 84 1-84 68-164 (165)
20 1tte_A Ubiquitin-conjugating e 100.0 2.3E-33 7.9E-38 186.9 9.9 85 1-85 66-151 (215)
21 3fn1_B NEDD8-conjugating enzym 100.0 4.2E-33 1.4E-37 179.3 10.1 84 1-84 77-167 (167)
22 3rcz_B SUMO-conjugating enzyme 100.0 5.7E-33 1.9E-37 178.4 10.1 84 1-84 78-163 (163)
23 3bzh_A Ubiquitin-conjugating e 100.0 5.5E-33 1.9E-37 182.7 10.3 84 1-84 111-194 (194)
24 2gjd_A Ubiquitin-conjugating e 100.0 5.4E-33 1.8E-37 177.4 9.8 84 1-84 72-157 (157)
25 2pwq_A Ubiquitin conjugating e 100.0 2.4E-33 8.2E-38 186.9 8.4 85 1-85 86-171 (216)
26 2grr_A Ubiquitin-conjugating e 100.0 9E-33 3.1E-37 177.0 9.9 85 1-85 75-161 (161)
27 2onu_A Ubiquitin-conjugating e 100.0 2.9E-33 9.8E-38 178.0 7.2 85 1-85 62-148 (152)
28 1c4z_D UBCH7, ubiquitin conjug 100.0 2.3E-33 7.9E-38 178.5 6.7 85 1-85 65-150 (154)
29 2z5d_A Ubiquitin-conjugating e 100.0 1.8E-33 6.1E-38 183.1 5.6 85 1-85 84-170 (179)
30 3e46_A Ubiquitin-conjugating e 100.0 2.2E-32 7.5E-37 185.8 10.6 85 1-85 123-208 (253)
31 1i7k_A Ubiquitin-conjugating e 100.0 1.7E-32 5.8E-37 178.4 8.8 84 1-85 93-176 (179)
32 1y8x_A Ubiquitin-conjugating e 100.0 9.2E-32 3.1E-36 172.2 9.9 82 1-82 67-148 (160)
33 3o2u_A NEDD8-conjugating enzym 100.0 5E-32 1.7E-36 177.6 8.6 83 1-83 96-178 (190)
34 1yf9_A Ubiquitin carrier prote 100.0 2.6E-32 9E-37 176.4 6.8 85 1-85 71-157 (171)
35 2nvu_C NEDD8-conjugating enzym 100.0 1.9E-31 6.4E-36 173.6 9.5 83 1-83 87-169 (180)
36 2y9m_A Ubiquitin-conjugating e 100.0 3.3E-31 1.1E-35 171.3 9.8 84 1-84 81-168 (172)
37 3rz3_A Ubiquitin-conjugating e 100.0 2.5E-31 8.4E-36 173.3 8.8 84 1-84 71-173 (183)
38 4ddg_A Ubiquitin-conjugating e 100.0 7.4E-31 2.5E-35 187.3 10.6 85 1-85 66-150 (399)
39 1yrv_A Ubiquitin-conjugating l 100.0 1.2E-30 4.1E-35 168.4 7.5 80 1-81 86-168 (169)
40 2awf_A Ubiquitin-conjugating e 100.0 1E-30 3.5E-35 169.1 5.7 78 1-78 81-172 (172)
41 4ds2_A Ubiquitin-conjugating e 99.9 7.2E-28 2.5E-32 154.9 7.0 77 1-77 85-164 (167)
42 3ceg_A Baculoviral IAP repeat- 99.9 1.4E-26 4.7E-31 161.5 6.5 84 1-84 143-243 (323)
43 2q0v_A Ubiquitin-conjugating e 99.9 2.3E-25 8E-30 142.1 0.9 66 1-67 88-156 (156)
44 2a4d_A Ubiquitin-conjugating e 99.9 1.9E-23 6.7E-28 133.7 3.8 61 1-61 92-156 (160)
45 1jat_B Ubiquitin-conjugating e 99.9 2.8E-24 9.5E-29 134.5 -1.8 63 1-64 73-138 (138)
46 2hlw_A Ubiquitin-conjugating e 99.9 4.2E-23 1.4E-27 133.2 3.2 61 1-61 102-166 (170)
47 2fo3_A Ubiquitin-conjugating e 99.9 4.7E-22 1.6E-26 122.6 5.4 54 1-54 69-123 (125)
48 2h2y_A Ubiquitin-conjugating e 99.8 1.7E-21 5.8E-26 121.7 5.8 52 1-52 83-135 (136)
49 1zuo_A Hypothetical protein LO 99.8 4.2E-22 1.5E-26 130.0 1.3 76 1-84 105-182 (186)
50 2a7l_A Hypothetical ubiquitin- 99.8 4.3E-20 1.5E-24 115.4 5.5 48 1-48 87-136 (136)
51 2f4w_A Ubiquitin-conjugating e 99.7 2.4E-17 8.1E-22 107.6 7.5 53 1-55 77-132 (187)
52 3r3q_A Suppressor protein STP2 99.5 6.2E-14 2.1E-18 89.7 5.3 53 1-54 97-161 (162)
53 2z6o_A UFM1-conjugating enzyme 99.2 7.8E-13 2.7E-17 84.7 0.5 41 1-41 99-144 (172)
54 3obq_A Tumor susceptibility ge 98.9 1.8E-09 6.1E-14 67.9 3.9 46 1-48 85-137 (146)
55 3kpa_A Probable ubiquitin fold 98.4 2.7E-08 9.2E-13 62.8 -0.8 31 1-34 101-132 (168)
56 2cwb_A Chimera of immunoglobul 93.4 0.015 5E-07 34.6 0.0 35 49-83 20-54 (108)
57 2yzh_A Probable thiol peroxida 43.4 16 0.00053 21.7 2.3 32 16-47 140-171 (171)
58 4g2e_A Peroxiredoxin; redox pr 42.8 25 0.00084 20.7 3.1 32 15-46 125-156 (157)
59 3mfq_A TROA, high-affinity zin 42.2 40 0.0014 22.3 4.4 47 30-82 106-152 (282)
60 2kru_A Light-independent proto 41.2 31 0.0011 18.2 2.9 29 57-85 7-35 (63)
61 2jsy_A Probable thiol peroxida 40.5 24 0.00082 20.6 2.8 33 15-47 134-166 (167)
62 4gqc_A Thiol peroxidase, perox 39.9 35 0.0012 20.2 3.5 34 15-48 127-160 (164)
63 2fkn_A Urocanate hydratase; ro 37.8 42 0.0014 24.9 4.1 29 56-84 276-304 (552)
64 1pq4_A Periplasmic binding pro 37.7 25 0.00085 23.4 2.8 48 29-82 134-181 (291)
65 1x87_A Urocanase protein; stru 37.5 43 0.0015 24.9 4.1 29 56-84 275-303 (551)
66 1uwk_A Urocanate hydratase; hy 37.0 44 0.0015 24.9 4.1 29 56-84 280-308 (557)
67 2c1l_A Restriction endonucleas 36.3 7.2 0.00025 26.8 -0.1 11 11-21 6-16 (358)
68 3gi1_A LBP, laminin-binding pr 33.8 32 0.0011 22.8 2.8 47 30-82 124-170 (286)
69 2prs_A High-affinity zinc upta 33.3 33 0.0011 22.6 2.8 47 30-82 119-165 (284)
70 2o1e_A YCDH; alpha-beta protei 32.1 35 0.0012 23.0 2.8 47 30-82 135-181 (312)
71 3fap_B FRAP, FKBP12-rapamycin 31.7 72 0.0025 17.9 4.3 45 34-84 27-72 (94)
72 2l09_A ASR4154 protein; proto- 31.6 30 0.001 18.2 1.9 29 57-85 6-34 (62)
73 2f4m_B UV excision repair prot 31.3 58 0.002 16.9 3.0 20 56-75 37-56 (61)
74 2ys2_A Cytoplasmic tyrosine-pr 31.1 10 0.00035 19.1 -0.0 16 9-24 13-29 (50)
75 2npu_A FKBP12-rapamycin comple 30.8 87 0.003 18.6 4.6 43 35-83 58-101 (126)
76 3cx3_A Lipoprotein; zinc-bindi 30.7 38 0.0013 22.4 2.8 47 30-82 122-168 (284)
77 1toa_A Tromp-1, protein (perip 30.5 39 0.0013 22.8 2.8 47 30-82 140-186 (313)
78 2e6i_A Tyrosine-protein kinase 30.5 15 0.00051 19.5 0.6 16 10-25 14-30 (64)
79 3ujp_A Mn transporter subunit; 29.8 46 0.0016 22.5 3.1 48 29-82 132-179 (307)
80 3hh8_A Metal ABC transporter s 29.5 42 0.0014 22.4 2.8 47 30-82 126-172 (294)
81 1pve_A HHR23B, UV excision rep 29.1 59 0.002 17.5 2.9 21 56-76 39-59 (72)
82 1psq_A Probable thiol peroxida 28.8 57 0.0019 18.9 3.1 31 15-45 132-162 (163)
83 1xvl_A Mn transporter, MNTC pr 26.6 49 0.0017 22.4 2.8 47 30-82 147-193 (321)
84 3c9p_A Uncharacterized protein 26.2 19 0.00066 21.4 0.6 18 9-26 67-85 (123)
85 3p7x_A Probable thiol peroxida 25.7 54 0.0018 19.1 2.6 31 15-45 135-165 (166)
86 3ixr_A Bacterioferritin comigr 23.5 90 0.0031 18.5 3.4 31 15-47 147-177 (179)
87 3keb_A Probable thiol peroxida 23.0 73 0.0025 20.5 3.0 37 15-51 143-179 (224)
88 2j3t_C Trafficking protein par 22.7 70 0.0024 19.1 2.7 40 33-82 90-137 (145)
89 3gkn_A Bacterioferritin comigr 21.7 90 0.0031 17.8 3.1 31 15-47 131-161 (163)
No 1
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=7.2e-35 Score=185.15 Aligned_cols=86 Identities=79% Similarity=1.231 Sum_probs=82.8
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|++
T Consensus 67 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~ 146 (152)
T 2aak_A 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDVVE 146 (152)
T ss_dssp CCEEEESSCCCCTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCEEEEecCcccCCCCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcC
Q 034713 81 QSWTAD 86 (86)
Q Consensus 81 ~~~~~~ 86 (86)
+||++|
T Consensus 147 ~~a~~~ 152 (152)
T 2aak_A 147 QSWTAD 152 (152)
T ss_dssp HHCC--
T ss_pred HHcccC
Confidence 999987
No 2
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=1.3e-34 Score=183.78 Aligned_cols=84 Identities=35% Similarity=0.621 Sum_probs=82.6
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+||+
T Consensus 67 pP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~ 146 (151)
T 4gpr_A 67 APRVTFMTKVYHPNINKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREWTR 146 (151)
T ss_dssp CCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cceeEEecCcccceECCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhh
Q 034713 81 QSWT 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||+
T Consensus 147 ~ya~ 150 (151)
T 4gpr_A 147 MYAR 150 (151)
T ss_dssp HHCC
T ss_pred HhcC
Confidence 9986
No 3
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.8e-34 Score=182.86 Aligned_cols=85 Identities=29% Similarity=0.538 Sum_probs=83.2
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||+
T Consensus 64 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 143 (149)
T 2r0j_A 64 PPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQWNK 143 (149)
T ss_dssp CCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCeeEeccCCccCCCCCCCEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 034713 81 QSWTA 85 (86)
Q Consensus 81 ~~~~~ 85 (86)
+||+.
T Consensus 144 ~~a~~ 148 (149)
T 2r0j_A 144 IYANN 148 (149)
T ss_dssp HHSCC
T ss_pred HHccC
Confidence 99975
No 4
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.9e-35 Score=185.18 Aligned_cols=85 Identities=29% Similarity=0.507 Sum_probs=81.2
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||+
T Consensus 68 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~ 147 (154)
T 2c2v_B 68 APKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTR 147 (154)
T ss_dssp CCEEEECSCCCCTTBCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecCcccCcCccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 034713 81 QSWTA 85 (86)
Q Consensus 81 ~~~~~ 85 (86)
+||++
T Consensus 148 ~~a~~ 152 (154)
T 2c2v_B 148 LYAMN 152 (154)
T ss_dssp HHSSC
T ss_pred HhcCC
Confidence 99975
No 5
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-34 Score=185.16 Aligned_cols=84 Identities=58% Similarity=0.975 Sum_probs=82.6
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.|||++|+++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||+
T Consensus 67 PP~v~F~t~i~HPNI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~ 146 (169)
T 1ayz_A 67 PPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVE 146 (169)
T ss_dssp CCEEEESSCCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCccccccCCccCCCCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhh
Q 034713 81 QSWT 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+|++
T Consensus 147 ~~a~ 150 (169)
T 1ayz_A 147 KSWE 150 (169)
T ss_dssp HHHH
T ss_pred HHcC
Confidence 9997
No 6
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=4.2e-34 Score=181.26 Aligned_cols=84 Identities=38% Similarity=0.713 Sum_probs=82.2
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||+
T Consensus 67 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 146 (150)
T 1z2u_A 67 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREWTQ 146 (150)
T ss_dssp CCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CcEEEEecCcccCcCCCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhh
Q 034713 81 QSWT 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||+
T Consensus 147 ~~a~ 150 (150)
T 1z2u_A 147 KYAM 150 (150)
T ss_dssp HHCC
T ss_pred HHhC
Confidence 9984
No 7
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=4.4e-34 Score=183.99 Aligned_cols=83 Identities=34% Similarity=0.659 Sum_probs=81.6
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||+
T Consensus 84 PP~V~F~T~i~HPNI~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~ 163 (166)
T 2ayv_A 84 PPKVNFTTKIYHPNINSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREWSQ 163 (166)
T ss_dssp CCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CceeeeccCCcCCcCCCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh
Q 034713 81 QSW 83 (86)
Q Consensus 81 ~~~ 83 (86)
+||
T Consensus 164 ~~A 166 (166)
T 2ayv_A 164 KYA 166 (166)
T ss_dssp HHC
T ss_pred HhC
Confidence 986
No 8
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=5.8e-34 Score=183.26 Aligned_cols=84 Identities=39% Similarity=0.728 Sum_probs=82.3
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|+++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+||+
T Consensus 82 PP~v~F~T~i~HPnV~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~ 161 (165)
T 2c4o_A 82 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQ 161 (165)
T ss_dssp CCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCcCCcCCCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhh
Q 034713 81 QSWT 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||+
T Consensus 162 ~~a~ 165 (165)
T 2c4o_A 162 KYAM 165 (165)
T ss_dssp HTTC
T ss_pred HHhC
Confidence 9984
No 9
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2.6e-34 Score=183.14 Aligned_cols=86 Identities=29% Similarity=0.525 Sum_probs=83.6
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||+
T Consensus 68 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~ 147 (155)
T 1jat_A 68 APKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTK 147 (155)
T ss_dssp CCEEEECSCCCBTTBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHHHH
T ss_pred CCcceeecccccCCCCCCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcC
Q 034713 81 QSWTAD 86 (86)
Q Consensus 81 ~~~~~~ 86 (86)
+||+++
T Consensus 148 ~~a~~~ 153 (155)
T 1jat_A 148 LYAKKK 153 (155)
T ss_dssp HHSEEC
T ss_pred HhcccC
Confidence 999753
No 10
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=5.7e-34 Score=181.48 Aligned_cols=86 Identities=21% Similarity=0.407 Sum_probs=83.5
Q ss_pred CCeEEEecCCccccccCCCceeeccc-cCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDIL-QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIV 79 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l-~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 79 (86)
+|+|+|.|+||||||+.+|.||+++| .++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||
T Consensus 67 PP~v~f~t~i~HPnV~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~ 146 (155)
T 1wzv_A 67 PPMIKFTTKIYHPNVDENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFT 146 (155)
T ss_dssp CCEEEESSCCCBTTBCTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCcceeeCCCccCcCCCCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcC
Q 034713 80 EQSWTAD 86 (86)
Q Consensus 80 ~~~~~~~ 86 (86)
++||+++
T Consensus 147 ~~~a~~~ 153 (155)
T 1wzv_A 147 LRFGVDR 153 (155)
T ss_dssp HHHCEEC
T ss_pred HHhcccC
Confidence 9999764
No 11
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2.6e-34 Score=182.09 Aligned_cols=84 Identities=29% Similarity=0.577 Sum_probs=82.1
Q ss_pred CCeEEEecCCccccccC-CCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIV 79 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~-~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 79 (86)
+|+|+|.|+||||||+. +|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+||
T Consensus 65 PP~v~f~t~i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~ 144 (149)
T 1fxt_A 65 PPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWT 144 (149)
T ss_dssp CCEEEESSCCCBTTBCSSSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHHH
T ss_pred CCEEEEeCCCccCCCcCCCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Confidence 59999999999999998 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh
Q 034713 80 EQSWT 84 (86)
Q Consensus 80 ~~~~~ 84 (86)
++||+
T Consensus 145 ~~~a~ 149 (149)
T 1fxt_A 145 RLYAS 149 (149)
T ss_dssp HHHCC
T ss_pred HHhcC
Confidence 99984
No 12
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.1e-33 Score=180.83 Aligned_cols=85 Identities=25% Similarity=0.476 Sum_probs=82.4
Q ss_pred CCeEEEecCCccccccC-CCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIV 79 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~-~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 79 (86)
+|+|+|.|+||||||+. +|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+||
T Consensus 74 PP~v~f~t~i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~ 153 (159)
T 2bep_A 74 PPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWA 153 (159)
T ss_dssp CCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCEEEeeCCCCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Confidence 59999999999999995 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 034713 80 EQSWTA 85 (86)
Q Consensus 80 ~~~~~~ 85 (86)
++||++
T Consensus 154 ~~~a~~ 159 (159)
T 2bep_A 154 HVYAGA 159 (159)
T ss_dssp HHHSCC
T ss_pred HHhhcC
Confidence 999864
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=1.4e-33 Score=180.98 Aligned_cols=84 Identities=31% Similarity=0.692 Sum_probs=81.9
Q ss_pred CCeEEEecCCccccccCCCceeecccc-------------CCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhC
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSEN 67 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~-------------~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~ 67 (86)
+|+|+|.|+||||||+.+|.||+++|. ++|+|++||++||.+|++||.+|++++|+|.+||.+|++|
T Consensus 67 PP~v~f~t~i~HPNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~ 146 (164)
T 3h8k_A 67 PPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDD 146 (164)
T ss_dssp CCEEEECSCCCCTTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHC
T ss_pred CCEEEEcCCCccCCCCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHC
Confidence 599999999999999999999999997 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 034713 68 KREYNRRVREIVEQSWT 84 (86)
Q Consensus 68 ~~~f~~~~~~~~~~~~~ 84 (86)
+++|.++||+|++++++
T Consensus 147 ~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 147 REQFYKIAKQIVQKSLG 163 (164)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999999986
No 14
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-33 Score=181.98 Aligned_cols=85 Identities=29% Similarity=0.577 Sum_probs=82.9
Q ss_pred CCeEEEecCCccccccCCCceeecccc----CCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQ----NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 76 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~----~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~ 76 (86)
+|+|+|.|+||||||+.+|.|||++|+ ++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||
T Consensus 67 PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r 146 (169)
T 1yh2_A 67 PPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNAR 146 (169)
T ss_dssp CCEEEESSCCCBTTBCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHH
T ss_pred CcEEEeecCCccccCCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHH
Confidence 599999999999999999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q 034713 77 EIVEQSWTA 85 (86)
Q Consensus 77 ~~~~~~~~~ 85 (86)
+||++||+.
T Consensus 147 ~~~~~~a~~ 155 (169)
T 1yh2_A 147 QWTEKHARQ 155 (169)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHHccc
Confidence 999999974
No 15
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=4.7e-34 Score=182.49 Aligned_cols=83 Identities=33% Similarity=0.527 Sum_probs=81.5
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+||+
T Consensus 76 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~ 155 (158)
T 1zdn_A 76 PPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 155 (158)
T ss_dssp CCEEEESSCCCCTTBCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCEEEeccCcccCCCCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh
Q 034713 81 QSW 83 (86)
Q Consensus 81 ~~~ 83 (86)
+||
T Consensus 156 ~~A 158 (158)
T 1zdn_A 156 IHG 158 (158)
T ss_dssp HHC
T ss_pred HhC
Confidence 986
No 16
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-33 Score=179.44 Aligned_cols=84 Identities=39% Similarity=0.610 Sum_probs=82.0
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+| +|+++|.++||+||+
T Consensus 72 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~ 150 (156)
T 2e2c_A 72 PPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEKYK 150 (156)
T ss_dssp CCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCcccCCCccCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred HHhhc
Q 034713 81 QSWTA 85 (86)
Q Consensus 81 ~~~~~ 85 (86)
+|+++
T Consensus 151 ~~~~~ 155 (156)
T 2e2c_A 151 TAQSD 155 (156)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 99875
No 17
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.1e-33 Score=184.57 Aligned_cols=85 Identities=32% Similarity=0.550 Sum_probs=81.9
Q ss_pred CCeEEEecCCcccccc-CCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIV 79 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~-~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 79 (86)
+|+|+|.|+||||||+ .+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+||
T Consensus 108 PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t 187 (193)
T 2f4z_A 108 PPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLWT 187 (193)
T ss_dssp CCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCeEEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Confidence 5999999999999999 599999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 034713 80 EQSWTA 85 (86)
Q Consensus 80 ~~~~~~ 85 (86)
++||++
T Consensus 188 ~~ya~~ 193 (193)
T 2f4z_A 188 ETFAKE 193 (193)
T ss_dssp HHHCC-
T ss_pred HHHccC
Confidence 999864
No 18
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=2.5e-33 Score=184.92 Aligned_cols=85 Identities=25% Similarity=0.476 Sum_probs=82.6
Q ss_pred CCeEEEecCCccccccC-CCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIV 79 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~-~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 79 (86)
+|+|+|.|+||||||+. +|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||++|++|+++|.++||+||
T Consensus 71 pP~v~f~t~i~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~ 150 (201)
T 3k9o_A 71 PPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWA 150 (201)
T ss_dssp CCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCccccccCcccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Confidence 59999999999999995 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 034713 80 EQSWTA 85 (86)
Q Consensus 80 ~~~~~~ 85 (86)
++||+.
T Consensus 151 ~~~a~~ 156 (201)
T 3k9o_A 151 HVYAGA 156 (201)
T ss_dssp HHHHCC
T ss_pred HHhccc
Confidence 999974
No 19
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-33 Score=180.91 Aligned_cols=84 Identities=31% Similarity=0.640 Sum_probs=81.7
Q ss_pred CCeEEEecCCccccccCCCceeeccc-------------cCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhC
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSEN 67 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l-------------~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~ 67 (86)
+|+|+|.|+||||||+.+|.||+++| .++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|
T Consensus 68 PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~ 147 (165)
T 2ucz_A 68 PPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDN 147 (165)
T ss_dssp CCEEEESSCCSCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTT
T ss_pred CCEEEEeCCCccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHC
Confidence 59999999999999999999999999 67899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 034713 68 KREYNRRVREIVEQSWT 84 (86)
Q Consensus 68 ~~~f~~~~~~~~~~~~~ 84 (86)
+++|.++||+|+++|++
T Consensus 148 ~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 148 RPEFERQVKLSILKSLG 164 (165)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999999976
No 20
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=2.3e-33 Score=186.86 Aligned_cols=85 Identities=28% Similarity=0.570 Sum_probs=83.0
Q ss_pred CCeEEEecCCccccccC-CCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIV 79 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~-~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 79 (86)
+|+|+|.|+||||||+. +|.|||++|.++|+|++||.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||
T Consensus 66 PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t 145 (215)
T 1tte_A 66 PPKMQFDTKVYHPNISSVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWT 145 (215)
T ss_dssp CCEEEETTTCCCSSSCSSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCcccccCCCccCcCcCCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHH
Confidence 59999999999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 034713 80 EQSWTA 85 (86)
Q Consensus 80 ~~~~~~ 85 (86)
++||..
T Consensus 146 ~~yA~~ 151 (215)
T 1tte_A 146 RLYASE 151 (215)
T ss_dssp HHSSCC
T ss_pred HHhccC
Confidence 999974
No 21
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=4.2e-33 Score=179.29 Aligned_cols=84 Identities=23% Similarity=0.420 Sum_probs=81.1
Q ss_pred CCeEEEecCCccccccCCCceeeccccC------CCCCcccHHHHHHHHHHhhcC-CCCCCCccHHHHHHHHhCHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQN------QWSPIYDVAAILTSIQSLLCD-PNPNSPANSEAARMFSENKREYNR 73 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~------~W~p~~~l~~vl~~i~~ll~~-p~~~~p~n~~aa~~~~~~~~~f~~ 73 (86)
+|+|+|.|+||||||+.+|.||+++|.. +|+|+++|.+||.+|++||.+ |++++|+|.+||.+|++|+++|.+
T Consensus 77 pP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~ 156 (167)
T 3fn1_B 77 PPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRN 156 (167)
T ss_dssp CCEEEECSCCCCSSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHH
T ss_pred CCeeEecCCcccCCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHH
Confidence 5999999999999999999999999975 799999999999999999999 699999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 034713 74 RVREIVEQSWT 84 (86)
Q Consensus 74 ~~~~~~~~~~~ 84 (86)
+||+||++||+
T Consensus 157 ~~r~~~~~~A~ 167 (167)
T 3fn1_B 157 KVDDYIKRYAR 167 (167)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhcC
Confidence 99999999984
No 22
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=5.7e-33 Score=178.37 Aligned_cols=84 Identities=39% Similarity=0.670 Sum_probs=81.1
Q ss_pred CCeEEEecCCccccccCCCceeeccccCC--CCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQ--WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREI 78 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~--W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~ 78 (86)
+|+|+|.|+||||||+.+|.||+++|.+. |+|+++|++||.+|++||.+|++++|+|.+||.+|++|+++|.++||+|
T Consensus 78 pP~v~F~t~i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~ 157 (163)
T 3rcz_B 78 PPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQ 157 (163)
T ss_dssp CCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCEEEEeCCCccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHH
Confidence 59999999999999999999999999864 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh
Q 034713 79 VEQSWT 84 (86)
Q Consensus 79 ~~~~~~ 84 (86)
|++||.
T Consensus 158 ~~~ya~ 163 (163)
T 3rcz_B 158 ARENAP 163 (163)
T ss_dssp HHHTCC
T ss_pred HHHhCc
Confidence 999973
No 23
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=5.5e-33 Score=182.66 Aligned_cols=84 Identities=32% Similarity=0.535 Sum_probs=82.2
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
.|+|+|.|+||||||+.+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||+
T Consensus 111 PP~V~F~T~i~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~ 190 (194)
T 3bzh_A 111 PPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTK 190 (194)
T ss_dssp CCEEEESSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CccccccCCCccceECCCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhh
Q 034713 81 QSWT 84 (86)
Q Consensus 81 ~~~~ 84 (86)
+||+
T Consensus 191 ~ya~ 194 (194)
T 3bzh_A 191 RYAT 194 (194)
T ss_dssp HHCC
T ss_pred HhhC
Confidence 9984
No 24
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=5.4e-33 Score=177.39 Aligned_cols=84 Identities=39% Similarity=0.637 Sum_probs=81.7
Q ss_pred CCeEEEecCCccccccCCCceeeccccC--CCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREI 78 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~--~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~ 78 (86)
+|+|+|.|+||||||+.+|.||+++|.. +|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|
T Consensus 72 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~ 151 (157)
T 2gjd_A 72 PPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQ 151 (157)
T ss_dssp CCEEECCTTCCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCeeeccCCCccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHH
Confidence 5999999999999999999999999987 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHhh
Q 034713 79 VEQSWT 84 (86)
Q Consensus 79 ~~~~~~ 84 (86)
|++||+
T Consensus 152 ~~~~a~ 157 (157)
T 2gjd_A 152 AKQYSK 157 (157)
T ss_dssp HHHTBC
T ss_pred HHHhcC
Confidence 999984
No 25
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=2.4e-33 Score=186.90 Aligned_cols=85 Identities=33% Similarity=0.596 Sum_probs=82.5
Q ss_pred CCeEEEecCCcccccc-CCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVY-ADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIV 79 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~-~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 79 (86)
+|+|+|.|+||||||+ .+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++||+||
T Consensus 86 PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t 165 (216)
T 2pwq_A 86 PPKIKFVTKIWHPNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWT 165 (216)
T ss_dssp CCEEEESSCCCBTTBCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCcccccCCCcCCCCcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Confidence 5999999999999999 489999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 034713 80 EQSWTA 85 (86)
Q Consensus 80 ~~~~~~ 85 (86)
++||+.
T Consensus 166 ~~ya~~ 171 (216)
T 2pwq_A 166 KTFATG 171 (216)
T ss_dssp HHHSCC
T ss_pred HHhcCC
Confidence 999974
No 26
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=9e-33 Score=176.98 Aligned_cols=85 Identities=36% Similarity=0.653 Sum_probs=81.8
Q ss_pred CCeEEEecCCccccccCCCceeeccccC--CCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQN--QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREI 78 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~--~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~ 78 (86)
+|+|+|.|+||||||+.+|.||+++|.. +|+|+++|.+||.+|++||.+|++++|+|.+|+.+|++|+++|.++||+|
T Consensus 75 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~ 154 (161)
T 2grr_A 75 PPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQ 154 (161)
T ss_dssp CCEEEESSCCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCEEEEecCcccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHH
Confidence 5999999999999999999999999986 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 034713 79 VEQSWTA 85 (86)
Q Consensus 79 ~~~~~~~ 85 (86)
|++||++
T Consensus 155 ~~~~a~~ 161 (161)
T 2grr_A 155 AKKFAPS 161 (161)
T ss_dssp HHHTCC-
T ss_pred HHHHhcC
Confidence 9999864
No 27
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=2.9e-33 Score=177.96 Aligned_cols=85 Identities=31% Similarity=0.625 Sum_probs=82.0
Q ss_pred CCeEEEecCCccccccC-CCceeeccccCCCCCcccHHHHHHH-HHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYA-DGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREI 78 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~-~G~vcl~~l~~~W~p~~~l~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~ 78 (86)
+|+|+|.|+||||||+. +|.||+++|+++|+|+++|.+||.+ |++||.+|++++|+|.+||++|++|+++|.++||+|
T Consensus 62 pP~v~f~t~i~HPni~~~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~ 141 (152)
T 2onu_A 62 SPSIGFMNKLLHPNVDEASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEY 141 (152)
T ss_dssp CCEEEESSCCCCTTBCTTTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCeEEEecCCccCcCcCcCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHH
Confidence 59999999999999995 9999999999999999999999999 699999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 034713 79 VEQSWTA 85 (86)
Q Consensus 79 ~~~~~~~ 85 (86)
+++||+.
T Consensus 142 ~~~~a~~ 148 (152)
T 2onu_A 142 VKLYASK 148 (152)
T ss_dssp HHHHSCG
T ss_pred HHHhccC
Confidence 9999975
No 28
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=2.3e-33 Score=178.50 Aligned_cols=85 Identities=18% Similarity=0.497 Sum_probs=80.4
Q ss_pred CCeEEEecCCccccccCCCceeecccc-CCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIV 79 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~-~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 79 (86)
+|+|+|.|+||||||+.+|.||+++|. ++|+|++++.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+|+
T Consensus 65 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 144 (154)
T 1c4z_D 65 PPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFT 144 (154)
T ss_dssp CCEEEESSCCCCTTBCTTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHH
T ss_pred CCEEEEeCCCccccCCCCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 599999999999999999999999997 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 034713 80 EQSWTA 85 (86)
Q Consensus 80 ~~~~~~ 85 (86)
++||++
T Consensus 145 ~~~a~~ 150 (154)
T 1c4z_D 145 KKYGEK 150 (154)
T ss_dssp TTC---
T ss_pred HHhccc
Confidence 999975
No 29
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.98 E-value=1.8e-33 Score=183.05 Aligned_cols=85 Identities=28% Similarity=0.633 Sum_probs=82.9
Q ss_pred CCeEEEecCCccccccC-CCceeeccccCCCCCcccHHHHHHH-HHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYA-DGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREI 78 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~-~G~vcl~~l~~~W~p~~~l~~vl~~-i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~ 78 (86)
+|+|+|.|+||||||+. +|.||+++|+++|+|+++|.+||.+ |++||.+|++++|+|.+||.+|++|+++|.++||+|
T Consensus 84 PP~V~F~t~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~ 163 (179)
T 2z5d_A 84 SPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEY 163 (179)
T ss_dssp CCEEEESSCCCBTTBCTTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CceEEEecCCccCcCCCCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHH
Confidence 59999999999999998 9999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 034713 79 VEQSWTA 85 (86)
Q Consensus 79 ~~~~~~~ 85 (86)
+++||+.
T Consensus 164 ~~~~a~~ 170 (179)
T 2z5d_A 164 IQKYATE 170 (179)
T ss_dssp HHHHSSH
T ss_pred HHHHccc
Confidence 9999974
No 30
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.98 E-value=2.2e-32 Score=185.77 Aligned_cols=85 Identities=25% Similarity=0.476 Sum_probs=82.6
Q ss_pred CCeEEEecCCccccccC-CCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIV 79 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~-~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 79 (86)
+|+|+|.|+||||||+. +|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||
T Consensus 123 PP~V~F~T~i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t 202 (253)
T 3e46_A 123 PPKVRFITKIWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWA 202 (253)
T ss_dssp CCEEEESSCCCBTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCeeeecCCCccCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHH
Confidence 59999999999999995 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhc
Q 034713 80 EQSWTA 85 (86)
Q Consensus 80 ~~~~~~ 85 (86)
++||+.
T Consensus 203 ~~yA~~ 208 (253)
T 3e46_A 203 HVYAGA 208 (253)
T ss_dssp HHHHCC
T ss_pred HHhccc
Confidence 999974
No 31
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=1.7e-32 Score=178.45 Aligned_cols=84 Identities=38% Similarity=0.602 Sum_probs=81.3
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.|||++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+| +|+++|.++|+++++
T Consensus 93 PP~V~F~T~i~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~ 171 (179)
T 1i7k_A 93 APTVKFLTPCYHPNVDTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYS 171 (179)
T ss_dssp CCEEEESSCCCSTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHH
T ss_pred CceEEEecCCccCccccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHhhc
Q 034713 81 QSWTA 85 (86)
Q Consensus 81 ~~~~~ 85 (86)
+++++
T Consensus 172 ~~~~~ 176 (179)
T 1i7k_A 172 KQVTS 176 (179)
T ss_dssp TTCC-
T ss_pred HHhcc
Confidence 98864
No 32
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=9.2e-32 Score=172.23 Aligned_cols=82 Identities=27% Similarity=0.614 Sum_probs=79.7
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++|+++|.++||++++
T Consensus 67 PP~v~f~t~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~ 146 (160)
T 1y8x_A 67 PPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMR 146 (160)
T ss_dssp CCEEEECSCCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCccCcCCCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHh
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HH
Q 034713 81 QS 82 (86)
Q Consensus 81 ~~ 82 (86)
..
T Consensus 147 ~~ 148 (160)
T 1y8x_A 147 GG 148 (160)
T ss_dssp SE
T ss_pred hC
Confidence 64
No 33
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.97 E-value=5e-32 Score=177.59 Aligned_cols=83 Identities=29% Similarity=0.574 Sum_probs=80.4
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||+|++
T Consensus 96 PP~v~f~t~i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~ 175 (190)
T 3o2u_A 96 PPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTMS 175 (190)
T ss_dssp CCEEEECSCCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHHB
T ss_pred CceeEEecCcccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred HHh
Q 034713 81 QSW 83 (86)
Q Consensus 81 ~~~ 83 (86)
.+.
T Consensus 176 ~~~ 178 (190)
T 3o2u_A 176 GGS 178 (190)
T ss_dssp TCE
T ss_pred hcC
Confidence 653
No 34
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.97 E-value=2.6e-32 Score=176.43 Aligned_cols=85 Identities=28% Similarity=0.574 Sum_probs=81.7
Q ss_pred CCeEEEecCCccccccC-CCceeeccccCCCCCcccHHHHHHHH-HHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYA-DGSICLDILQNQWSPIYDVAAILTSI-QSLLCDPNPNSPANSEAARMFSENKREYNRRVREI 78 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~-~G~vcl~~l~~~W~p~~~l~~vl~~i-~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~ 78 (86)
+|+|+|.|+||||||+. +|.||+++|.++|+|+++|.+||.+| ++||.+|++++|+|.+||.+|++|+++|.++||+|
T Consensus 71 PP~v~F~t~i~HPNi~~~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~ 150 (171)
T 1yf9_A 71 SPSIGFCNRILHPNVDERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREH 150 (171)
T ss_dssp CCEEEESSCCCBTTBCTTTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCeEEeecCcccccCcccCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHH
Confidence 59999999999999995 99999999999999999999999997 89999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 034713 79 VEQSWTA 85 (86)
Q Consensus 79 ~~~~~~~ 85 (86)
+++||+.
T Consensus 151 ~~~~a~~ 157 (171)
T 1yf9_A 151 VSTHATP 157 (171)
T ss_dssp HHHHCCH
T ss_pred HHHHcCh
Confidence 9999863
No 35
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=1.9e-31 Score=173.61 Aligned_cols=83 Identities=25% Similarity=0.579 Sum_probs=80.2
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|+++|.+||.+|+++|.+|++++|+|.+||.+|++|+++|.++||++++
T Consensus 87 PP~v~F~t~i~HPNV~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~ 166 (180)
T 2nvu_C 87 PPKVKCETMVYHPNIDLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMR 166 (180)
T ss_dssp CCEEEECSCCCBTTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCcCceeccCccCCCCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHh
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHh
Q 034713 81 QSW 83 (86)
Q Consensus 81 ~~~ 83 (86)
...
T Consensus 167 ~~~ 169 (180)
T 2nvu_C 167 GGY 169 (180)
T ss_dssp SEE
T ss_pred hCC
Confidence 643
No 36
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.97 E-value=3.3e-31 Score=171.29 Aligned_cols=84 Identities=23% Similarity=0.479 Sum_probs=80.9
Q ss_pred CCeEEEec-CCcccccc-CCCceeecccc-CCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHh-CHHHHHHHHH
Q 034713 1 MTDFKFQF-CLVLAKVY-ADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE-NKREYNRRVR 76 (86)
Q Consensus 1 ~P~v~F~t-~i~HPNV~-~~G~vcl~~l~-~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~-~~~~f~~~~~ 76 (86)
+|+|+|.| +||||||+ .+|.||+++|. ++|+|+++|.+||.+|++||.+|++++|+|.+||.+|++ |+++|.++||
T Consensus 81 PP~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~ 160 (172)
T 2y9m_A 81 PPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVK 160 (172)
T ss_dssp CCEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHH
T ss_pred CCEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHH
Confidence 59999999 99999995 79999999998 899999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHhh
Q 034713 77 EIVEQSWT 84 (86)
Q Consensus 77 ~~~~~~~~ 84 (86)
+|++++..
T Consensus 161 ~~~~~~~~ 168 (172)
T 2y9m_A 161 YFLAERER 168 (172)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99999874
No 37
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.97 E-value=2.5e-31 Score=173.35 Aligned_cols=84 Identities=35% Similarity=0.633 Sum_probs=80.1
Q ss_pred CCeEEEecCCccccccCCCceeecccc-------------CCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHh-
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSE- 66 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~-------------~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~- 66 (86)
+|+|+|.|+||||||+++|.||+++|. ++|+|+++|++||.+|++||.+|++++|+|.+|+.+|++
T Consensus 71 PP~v~f~t~i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~ 150 (183)
T 3rz3_A 71 PPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKW 150 (183)
T ss_dssp CCEEEESSCCCCTTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHH
T ss_pred CCeeEecCCCccCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhc
Confidence 599999999999999999999999997 789999999999999999999999999999999999998
Q ss_pred -----CHHHHHHHHHHHHHHHhh
Q 034713 67 -----NKREYNRRVREIVEQSWT 84 (86)
Q Consensus 67 -----~~~~f~~~~~~~~~~~~~ 84 (86)
++++|.++||+++++++.
T Consensus 151 ~~~~~~~~~y~~~v~~~v~~s~~ 173 (183)
T 3rz3_A 151 KESKGKDREYTDIIRKQVLGTKV 173 (183)
T ss_dssp HHTTTCCCHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHH
Confidence 789999999999999875
No 38
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.97 E-value=7.4e-31 Score=187.33 Aligned_cols=85 Identities=38% Similarity=0.677 Sum_probs=83.2
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 80 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~ 80 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|++||++||.+|++||.+|++++|+|.+||.+|++|+++|.++||+||+
T Consensus 66 pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~ 145 (399)
T 4ddg_A 66 PPKVAFTTRIYHPNINSNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQ 145 (399)
T ss_dssp CCEEEESSCCCCTTBCTTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CcEEEeeccccccccCCCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 034713 81 QSWTA 85 (86)
Q Consensus 81 ~~~~~ 85 (86)
+|+..
T Consensus 146 ~~a~~ 150 (399)
T 4ddg_A 146 KYAMG 150 (399)
T ss_dssp HHTSC
T ss_pred Hhhcc
Confidence 99974
No 39
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=1.2e-30 Score=168.39 Aligned_cols=80 Identities=26% Similarity=0.480 Sum_probs=76.2
Q ss_pred CCeEEEecCCccccc-cCCCceeecccc--CCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKV-YADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 77 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV-~~~G~vcl~~l~--~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~ 77 (86)
+|+|+|.|+|||||| +.+|.||+++|+ ++|+|+++|.+||.+|++||.+|++++|+|.+||++|++|+++|.++ |+
T Consensus 86 PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~ 164 (169)
T 1yrv_A 86 PPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTI-LR 164 (169)
T ss_dssp CCEEEESSCCCCTTBCTTTCCBCCHHHHCGGGCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHSCHHHHHHH-HH
T ss_pred CCcceecCCCccCcccCCCCeEeehhhcCCcCCCCcCCHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHH-HH
Confidence 599999999999999 789999999998 89999999999999999999999999999999999999999999998 88
Q ss_pred HHHH
Q 034713 78 IVEQ 81 (86)
Q Consensus 78 ~~~~ 81 (86)
++++
T Consensus 165 ~v~~ 168 (169)
T 1yrv_A 165 LFNR 168 (169)
T ss_dssp HHC-
T ss_pred HhhC
Confidence 8764
No 40
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.96 E-value=1e-30 Score=169.06 Aligned_cols=78 Identities=36% Similarity=0.671 Sum_probs=48.3
Q ss_pred CCeEEEecCCccccccCCCceeecccc-------------CCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhC
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSEN 67 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~-------------~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~ 67 (86)
+|+|+|.|+||||||+.+|.||+++|. ++|+|+++|++||.+|++||.+|++++|+|.+||++|++|
T Consensus 81 PP~v~F~T~i~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~Pn~~~p~n~~aa~~~~~d 160 (172)
T 2awf_A 81 PPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWRED 160 (172)
T ss_dssp CCEEEECSCCCCTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSCC-----------------
T ss_pred CCcccccCCCccCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHCcCCCCccCHHHHHHHHHC
Confidence 599999999999999999999999996 6899999999999999999999999999999999999999
Q ss_pred HH-HHHHHHHHH
Q 034713 68 KR-EYNRRVREI 78 (86)
Q Consensus 68 ~~-~f~~~~~~~ 78 (86)
++ +|.++||+|
T Consensus 161 ~~~~f~~~vr~~ 172 (172)
T 2awf_A 161 RNGEFKRKVARC 172 (172)
T ss_dssp ------------
T ss_pred cHHHHHHHHHhC
Confidence 99 999999975
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.95 E-value=7.2e-28 Score=154.94 Aligned_cols=77 Identities=17% Similarity=0.393 Sum_probs=71.6
Q ss_pred CCeEEEecCCccccccCCCceeeccccCCCCCcccHHHHHH-HHHHhhcC--CCCCCCccHHHHHHHHhCHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDILQNQWSPIYDVAAILT-SIQSLLCD--PNPNSPANSEAARMFSENKREYNRRVRE 77 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~-~i~~ll~~--p~~~~p~n~~aa~~~~~~~~~f~~~~~~ 77 (86)
+|+|+|.|+||||||+.+|.||+++|.++|+|++++.++|. .|++|+.. |++++|+|.+||.+|++|+++|.++||+
T Consensus 85 pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~~vll~~l~~l~~~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 85 PPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQHASDVIKLVLDRVFSQYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp CCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHHHHHHHHHHHHHTSTTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred CCEEEEeCCcccccCCCCCEEEcccCcCCCCCCCChHHHHHHHHHHHHhcCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 59999999999999999999999999999999999999765 67888875 8999999999999999999999999983
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.93 E-value=1.4e-26 Score=161.54 Aligned_cols=84 Identities=25% Similarity=0.463 Sum_probs=78.5
Q ss_pred CCeEEEecC-----CccccccCCCceeecccc-------CCCCCcc-cHHHHHHHHHHhhc--CCCCCCCccHHH--HHH
Q 034713 1 MTDFKFQFC-----LVLAKVYADGSICLDILQ-------NQWSPIY-DVAAILTSIQSLLC--DPNPNSPANSEA--ARM 63 (86)
Q Consensus 1 ~P~v~F~t~-----i~HPNV~~~G~vcl~~l~-------~~W~p~~-~l~~vl~~i~~ll~--~p~~~~p~n~~a--a~~ 63 (86)
+|+|+|.|+ ||||||+.+|.|||++|+ ++|+|++ +|.+||.+|++||. +|++++|+|.++ +.+
T Consensus 143 PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VLlsIqsLL~~~~Pn~~dP~~~~a~a~~~ 222 (323)
T 3ceg_A 143 PPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFLQVLVSVQSLILVAEPYFNEPGYERSRGTPS 222 (323)
T ss_dssp CCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHHHHHHHHTSCSSGGGGSTTGGGGTTSHH
T ss_pred CCeEEEeccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCcCCHHHHHHHHHHHHcCCCCCCCCccCHHHHHhhh
Confidence 599999998 999999999999999997 6899999 89999999999996 677799999987 678
Q ss_pred HHhCHHHHHHHHHHHHHHHhh
Q 034713 64 FSENKREYNRRVREIVEQSWT 84 (86)
Q Consensus 64 ~~~~~~~f~~~~~~~~~~~~~ 84 (86)
|.+|+++|.++||+||++||+
T Consensus 223 ~~~d~~~Y~~~vr~~t~k~A~ 243 (323)
T 3ceg_A 223 GTQSSREYDGNIRQATVKWAM 243 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHHHHHHHHhh
Confidence 999999999999999999986
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.90 E-value=2.3e-25 Score=142.07 Aligned_cols=66 Identities=21% Similarity=0.383 Sum_probs=60.8
Q ss_pred CCeEEEecCCccccccCCCce---eeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhC
Q 034713 1 MTDFKFQFCLVLAKVYADGSI---CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSEN 67 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~v---cl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~ 67 (86)
+|+|+|.|+||||||+.+|.| ||++|+ +|+|+++|++||.+|++||.+|++++|+|++||.+|.+|
T Consensus 88 PP~v~F~t~i~HPNV~~~G~icisCL~iL~-~WsP~~ti~~vL~sI~~ll~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 88 PPTVKFDTKIEMSCVDNCGRVIKNNLHILK-NWNRNYTIETILISLRQEMLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp CCEEEESBCCCCTTBCTTSBBCGGGSHHHH-TCCTTCCHHHHHHHHHHHTTSTTTTTCCCCCTTCBC---
T ss_pred CCeEEEEcccccCCCccCCeEehhhccccc-CCCCcCcHHHHHHHHHHHHhCCCCCCcCChHHHHHhhhC
Confidence 599999999999999999999 899987 599999999999999999999999999999999998765
No 44
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.88 E-value=1.9e-23 Score=133.68 Aligned_cols=61 Identities=16% Similarity=0.335 Sum_probs=57.9
Q ss_pred CCeEEEecCCcccccc-CCCceeecccc--CCCCCcccHHHHHHHHHHhhc-CCCCCCCccHHHH
Q 034713 1 MTDFKFQFCLVLAKVY-ADGSICLDILQ--NQWSPIYDVAAILTSIQSLLC-DPNPNSPANSEAA 61 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~-~~G~vcl~~l~--~~W~p~~~l~~vl~~i~~ll~-~p~~~~p~n~~aa 61 (86)
+|+|+|.|+||||||+ .+|.||+++|. ++|+|+++|++||.+|++||. +|++++|+|.|+|
T Consensus 92 PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 92 PPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 156 (160)
T ss_dssp CCEEEESBCCCCTTBCTTTCBBCGGGSHHHHTCCTTCCHHHHHHHHHHHHTSTTTTTCCCCCTTC
T ss_pred CcEEEEecCceeCCEECCCCEEehhhcCCccCCCccCcHHHHHHHHHHHHccCCCCCCCCChhhc
Confidence 5999999999999999 59999999998 899999999999999999995 6999999999987
No 45
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.87 E-value=2.8e-24 Score=134.54 Aligned_cols=63 Identities=16% Similarity=0.344 Sum_probs=58.9
Q ss_pred CCeEEEecCCccccccCC-Cce--eeccccCCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHH
Q 034713 1 MTDFKFQFCLVLAKVYAD-GSI--CLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMF 64 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~-G~v--cl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~ 64 (86)
+|+|+|.|+||||||+.+ |.| ||++|. +|+|+++|++||.+|++||.+|++++|+|++|+.+|
T Consensus 73 PP~v~f~t~i~HPnv~~~~G~i~~cL~~l~-~W~p~~~i~~vl~~i~~ll~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 73 PPKVTFISKINLPCVNPTTGEVQTDFHTLR-DWKRAYTMETLLLDLRKEMATPANKKLRQPKEGETF 138 (138)
T ss_dssp CCEEEESBCCCCTTBCTTTCBBCTTSHHHH-TCCTTCCHHHHHHHHHHHHTSHHHHTSCCCCTTCBC
T ss_pred CCceEEEcccccCCEeCCCCEEeeecccCC-CCCCcCcHHHHHHHHHHHHcCCCCCCCCCcchhhcC
Confidence 599999999999999985 999 999986 899999999999999999999999999999988654
No 46
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.87 E-value=4.2e-23 Score=133.21 Aligned_cols=61 Identities=16% Similarity=0.335 Sum_probs=57.7
Q ss_pred CCeEEEecCCcccccc-CCCceeecccc--CCCCCcccHHHHHHHHHHhhc-CCCCCCCccHHHH
Q 034713 1 MTDFKFQFCLVLAKVY-ADGSICLDILQ--NQWSPIYDVAAILTSIQSLLC-DPNPNSPANSEAA 61 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~-~~G~vcl~~l~--~~W~p~~~l~~vl~~i~~ll~-~p~~~~p~n~~aa 61 (86)
+|+|+|.|+||||||+ .+|.||+++|. ++|+|+++|++||.+|++||. .|+.++|+|.|||
T Consensus 102 PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL~sI~~ll~~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 102 PPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQ 166 (170)
T ss_dssp CCEEEECBCCCCSSBCSSSCBBCTTTCHHHHTCCSSCCHHHHHHHHHHHHHSTTTSSSCCCSSCC
T ss_pred CCeeEEecccccCCEeCCCCEEEhhhcCCCCCCCccCcHHHHHHHHHHHHccCCCCCCCCCcccc
Confidence 5999999999999999 69999999998 899999999999999999997 5899999999987
No 47
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.85 E-value=4.7e-22 Score=122.59 Aligned_cols=54 Identities=24% Similarity=0.448 Sum_probs=46.8
Q ss_pred CCeEEEecCC-ccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCCCC
Q 034713 1 MTDFKFQFCL-VLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNS 54 (86)
Q Consensus 1 ~P~v~F~t~i-~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~~~ 54 (86)
+|+|+|.|+| |||||+.+|.||+++|.++|+|++++.+||.+|++||.+|+.+.
T Consensus 69 PP~v~f~t~i~~HPnv~~~G~iCl~iL~~~W~P~~~i~~vl~si~~ll~~p~~~~ 123 (125)
T 2fo3_A 69 PPIVYFLQKPPKHTHVYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEKK 123 (125)
T ss_dssp CCEEEECSSCCCBTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHC------
T ss_pred CCEEEEeCCCCCCCcCCCCCEEEchhcCCCCCCCCcHHHHHHHHHHHHhCccccc
Confidence 5999999997 99999999999999999999999999999999999999998753
No 48
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.84 E-value=1.7e-21 Score=121.67 Aligned_cols=52 Identities=25% Similarity=0.468 Sum_probs=49.9
Q ss_pred CCeEEEecCC-ccccccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCCC
Q 034713 1 MTDFKFQFCL-VLAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNP 52 (86)
Q Consensus 1 ~P~v~F~t~i-~HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~~ 52 (86)
+|+|+|.|+| |||||+.+|.||+++|.++|+|+++|.+||.+|++||.+|+.
T Consensus 83 PP~v~f~t~i~~HPnv~~~G~ICl~iL~~~WsP~~ti~~vL~si~sll~~p~~ 135 (136)
T 2h2y_A 83 PPIVYFLQKPPKHTHVYSNGDICLSVLGDDYNPSLSISGLILSIISMLSSAKE 135 (136)
T ss_dssp CCEEEECSSCCCCTTBCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHSSSCC
T ss_pred CCEEEEeCCCCCCCcCCCCCEEECccccCCCCCCCcHHHHHHHHHHHHhCcCc
Confidence 5999999997 999999999999999999999999999999999999999975
No 49
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.83 E-value=4.2e-22 Score=130.04 Aligned_cols=76 Identities=20% Similarity=0.405 Sum_probs=65.4
Q ss_pred CCeEEEecCCccc-cccCCCceeecccc-CCCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHH
Q 034713 1 MTDFKFQFCLVLA-KVYADGSICLDILQ-NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREI 78 (86)
Q Consensus 1 ~P~v~F~t~i~HP-NV~~~G~vcl~~l~-~~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~ 78 (86)
+|+|+|.|++||| ||+.+|.|||++|. ++|+|+++|++||.+|++||.+|+... .|..++.+|.+++++.
T Consensus 105 PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~VL~sI~slL~~p~a~~--------~~~~~~~~Y~~~~~~~ 176 (186)
T 1zuo_A 105 PPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARV--------QFGANKNQYNLARAQQ 176 (186)
T ss_dssp CCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHHHHHHHHHHHHHTTCEE--------CTTCCTTCCCHHHHHH
T ss_pred CCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHHHHHHHHHHHcCCChhH--------hhccCHHHHhHHHHHH
Confidence 5999999999999 69999999999997 789999999999999999999986543 3455677888888888
Q ss_pred HHHHhh
Q 034713 79 VEQSWT 84 (86)
Q Consensus 79 ~~~~~~ 84 (86)
+.+++.
T Consensus 177 ~~~~~~ 182 (186)
T 1zuo_A 177 SYNSIV 182 (186)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777653
No 50
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.80 E-value=4.3e-20 Score=115.37 Aligned_cols=48 Identities=35% Similarity=0.616 Sum_probs=46.3
Q ss_pred CCeEEEecCCc--cccccCCCceeeccccCCCCCcccHHHHHHHHHHhhc
Q 034713 1 MTDFKFQFCLV--LAKVYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 48 (86)
Q Consensus 1 ~P~v~F~t~i~--HPNV~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~ 48 (86)
+|+|+|.|+|| ||||+.+|.||+++|+++|+|+++|++||.+|++||.
T Consensus 87 PP~v~F~T~i~~~HPNV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~slL~ 136 (136)
T 2a7l_A 87 SPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 136 (136)
T ss_dssp CCEEEEESSCCCCBTTBCTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcCCCccCCCCCeEEchhcCCCCCCCCcHHHHHHHHHHHhC
Confidence 59999999999 9999999999999999999999999999999999984
No 51
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.71 E-value=2.4e-17 Score=107.61 Aligned_cols=53 Identities=21% Similarity=0.455 Sum_probs=42.9
Q ss_pred CCeEEEecCCccccccCCCceeeccc---cCCCCCcccHHHHHHHHHHhhcCCCCCCC
Q 034713 1 MTDFKFQFCLVLAKVYADGSICLDIL---QNQWSPIYDVAAILTSIQSLLCDPNPNSP 55 (86)
Q Consensus 1 ~P~v~F~t~i~HPNV~~~G~vcl~~l---~~~W~p~~~l~~vl~~i~~ll~~p~~~~p 55 (86)
+|+|+|.|+ ||||+.+|.|||++| .++|+|+++|.+||.+|++||.+|+++..
T Consensus 77 PP~v~f~T~--~~~~~~~G~ICL~iL~~~~~~W~P~~ti~~vL~si~sll~~p~p~~g 132 (187)
T 2f4w_A 77 PPSIYMITP--NGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLG 132 (187)
T ss_dssp CCEEEECSC--CSSBCTTSCBC----------CCTTCCHHHHHHHHHHHHHSCCCCTT
T ss_pred CCcccccCC--CceeccCCeEeeeccccCccCCCCcCcHHHHHHHHHHHhcCCCCCCc
Confidence 599999999 999999999999999 58899999999999999999999987643
No 52
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.46 E-value=6.2e-14 Score=89.70 Aligned_cols=53 Identities=23% Similarity=0.443 Sum_probs=46.9
Q ss_pred CCeEEEec-------C---Cc-cccccCCCceeeccccCCCCC-cccHHHHHHHHHHhhcCCCCCC
Q 034713 1 MTDFKFQF-------C---LV-LAKVYADGSICLDILQNQWSP-IYDVAAILTSIQSLLCDPNPNS 54 (86)
Q Consensus 1 ~P~v~F~t-------~---i~-HPNV~~~G~vcl~~l~~~W~p-~~~l~~vl~~i~~ll~~p~~~~ 54 (86)
+|.|.|.+ + |+ ||||+.+|+||+++|. +|+| +.++.++|.+|+++|.+|+++.
T Consensus 97 PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL~-~W~p~~s~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 97 PPFISINLENFDMNTISSSLPIQEYIDSNGWIALPILH-AWDPAAMNLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp CCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGGG-SCCGGGCCHHHHHHHHHHTTSCCCCCC
T ss_pred CCEEEEECCCccccccccccCCCCCCCCCCcEeCcccc-cCCCCcCcHHHHHHHHHHHhcCCCCCC
Confidence 58887755 1 88 9999999999999995 7999 5799999999999999999875
No 53
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.25 E-value=7.8e-13 Score=84.75 Aligned_cols=41 Identities=22% Similarity=0.314 Sum_probs=36.7
Q ss_pred CCeEEEecC-CccccccCCCceeecccc-C---CCCCcccHHHHHH
Q 034713 1 MTDFKFQFC-LVLAKVYADGSICLDILQ-N---QWSPIYDVAAILT 41 (86)
Q Consensus 1 ~P~v~F~t~-i~HPNV~~~G~vcl~~l~-~---~W~p~~~l~~vl~ 41 (86)
+|+|+|.++ +|||||+.+|+||||+|. + .|+|.++|.++|.
T Consensus 99 PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~ 144 (172)
T 2z6o_A 99 APEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMA 144 (172)
T ss_dssp CCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHH
T ss_pred CCeeeeCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHh
Confidence 699999998 999999999999999994 3 4559999999984
No 54
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=98.86 E-value=1.8e-09 Score=67.94 Aligned_cols=46 Identities=20% Similarity=0.234 Sum_probs=40.3
Q ss_pred CCeEEEecC------CccccccCCCceeeccccCCCCC-cccHHHHHHHHHHhhc
Q 034713 1 MTDFKFQFC------LVLAKVYADGSICLDILQNQWSP-IYDVAAILTSIQSLLC 48 (86)
Q Consensus 1 ~P~v~F~t~------i~HPNV~~~G~vcl~~l~~~W~p-~~~l~~vl~~i~~ll~ 48 (86)
+|.| |.++ .+||||+.+|+||+++|. +|++ ..+|.+++..++++|.
T Consensus 85 pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~-~W~~~~snL~~ll~~l~~~F~ 137 (146)
T 3obq_A 85 PPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH-EWKHPQSDLLGLIQVMIVVFG 137 (146)
T ss_dssp CCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH-TCCTTTCCHHHHHHHHHHHHH
T ss_pred CCEE-EEeCCCCCEECCCCCCCCCCCEeccccc-ccCCCCCCHHHHHHHHHHHHh
Confidence 4767 7766 589999999999999996 4987 7899999999999987
No 55
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=98.38 E-value=2.7e-08 Score=62.85 Aligned_cols=31 Identities=19% Similarity=0.431 Sum_probs=27.0
Q ss_pred CCeEEEecC-CccccccCCCceeeccccCCCCCcc
Q 034713 1 MTDFKFQFC-LVLAKVYADGSICLDILQNQWSPIY 34 (86)
Q Consensus 1 ~P~v~F~t~-i~HPNV~~~G~vcl~~l~~~W~p~~ 34 (86)
+|+|+|.+. ++|||++.+|+|||+++ |+|.+
T Consensus 101 PPeI~Fp~ldgkt~kmYr~GkICLdIh---wkPlW 132 (168)
T 3kpa_A 101 PPEIALPELEGKTVKMYRGGKICMTTH---FFPLW 132 (168)
T ss_dssp CCCCBCGGGTTTCSSEETTTEECCCTT---HHHHH
T ss_pred CCEeecccccCcCccccCCCcEEeccc---cchhh
Confidence 699999995 89999999999999985 66654
No 56
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=93.35 E-value=0.015 Score=34.61 Aligned_cols=35 Identities=9% Similarity=-0.045 Sum_probs=0.0
Q ss_pred CCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHh
Q 034713 49 DPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 83 (86)
Q Consensus 49 ~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~~ 83 (86)
.-....|.+.++|++|+++++.|...||.|+.-++
T Consensus 20 ~~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a 54 (108)
T 2cwb_A 20 GETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDA 54 (108)
T ss_dssp -----------------------------------
T ss_pred CcccCCchhHHHHHHHHhchhccccccccccccCc
Confidence 33456899999999999999999999999995554
No 57
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=43.44 E-value=16 Score=21.65 Aligned_cols=32 Identities=9% Similarity=0.206 Sum_probs=20.5
Q ss_pred cCCCceeeccccCCCCCcccHHHHHHHHHHhh
Q 034713 16 YADGSICLDILQNQWSPIYDVAAILTSIQSLL 47 (86)
Q Consensus 16 ~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll 47 (86)
+++|.|-............+..+++..|..+|
T Consensus 140 D~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 140 DKEGKVAYVQLVPEITEEPNYDEVVNKVKELI 171 (171)
T ss_dssp CTTSBEEEEEECSBTTSCCCCHHHHHHHHHC-
T ss_pred cCCCeEEEEEeCCCcCCCCCHHHHHHHHHhhC
Confidence 56888877655444444556778888777654
No 58
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=42.79 E-value=25 Score=20.69 Aligned_cols=32 Identities=13% Similarity=0.139 Sum_probs=21.4
Q ss_pred ccCCCceeeccccCCCCCcccHHHHHHHHHHh
Q 034713 15 VYADGSICLDILQNQWSPIYDVAAILTSIQSL 46 (86)
Q Consensus 15 V~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~l 46 (86)
|+++|.|=.......+....++.+++..|.+|
T Consensus 125 ID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 125 IDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp ECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred ECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 57789886555445555555678888777654
No 59
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=42.22 E-value=40 Score=22.30 Aligned_cols=47 Identities=17% Similarity=0.254 Sum_probs=35.6
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 30 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 30 W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
|-.......+...|..-|..-++++ +..|..|.+.|.++..+.-+++
T Consensus 106 Wldp~~~~~~a~~I~~~L~~~dP~~------a~~y~~N~~~~~~~L~~ld~~~ 152 (282)
T 3mfq_A 106 WFSIPLYKSAVAVASEELQKLLPAK------AEMIQKNTEKYQAQLDDLHAWV 152 (282)
T ss_dssp GGSHHHHHHHHHHHHHHHTTTCGGG------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhChhh------HHHHHHHHHHHHHHHHHHHHHH
Confidence 8777788888899999998655443 5678888888888877765544
No 60
>2kru_A Light-independent protochlorophyllide reductase subunit B; NESG, PSI, BCHB, bacteriochlorophyll biosynthesis, chlorophyll biosynthesis; NMR {Chlorobaculum tepidum}
Probab=41.21 E-value=31 Score=18.18 Aligned_cols=29 Identities=17% Similarity=0.198 Sum_probs=22.7
Q ss_pred cHHHHHHHHhCHHHHHHHHHHHHHHHhhc
Q 034713 57 NSEAARMFSENKREYNRRVREIVEQSWTA 85 (86)
Q Consensus 57 n~~aa~~~~~~~~~f~~~~~~~~~~~~~~ 85 (86)
..||...+++=|-....+||.-+++||.+
T Consensus 7 t~EAe~~LkkIP~FVR~kvrr~tE~~Are 35 (63)
T 2kru_A 7 TAEAEKMLGKVPFFVRKKVRKNTDNYARE 35 (63)
T ss_dssp CHHHHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 45677777777777788999999998863
No 61
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=40.49 E-value=24 Score=20.57 Aligned_cols=33 Identities=6% Similarity=0.106 Sum_probs=22.0
Q ss_pred ccCCCceeeccccCCCCCcccHHHHHHHHHHhh
Q 034713 15 VYADGSICLDILQNQWSPIYDVAAILTSIQSLL 47 (86)
Q Consensus 15 V~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll 47 (86)
|+++|.|-.......+...-++.+++..|..++
T Consensus 134 id~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 134 LDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp ECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred EcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 356888877665444544556778888887765
No 62
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=39.92 E-value=35 Score=20.25 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=22.6
Q ss_pred ccCCCceeeccccCCCCCcccHHHHHHHHHHhhc
Q 034713 15 VYADGSICLDILQNQWSPIYDVAAILTSIQSLLC 48 (86)
Q Consensus 15 V~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~ 48 (86)
|+++|.|-...........-++.++|..|..|..
T Consensus 127 ID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~ 160 (164)
T 4gqc_A 127 VKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAG 160 (164)
T ss_dssp ECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHH
T ss_pred ECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhc
Confidence 5678888665444444444468889888887754
No 63
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=37.80 E-value=42 Score=24.93 Aligned_cols=29 Identities=17% Similarity=0.245 Sum_probs=23.9
Q ss_pred ccHHHHHHHHhCHHHHHHHHHHHHHHHhh
Q 034713 56 ANSEAARMFSENKREYNRRVREIVEQSWT 84 (86)
Q Consensus 56 ~n~~aa~~~~~~~~~f~~~~~~~~~~~~~ 84 (86)
.-.|+..+..+|++.|.+.|++...++.+
T Consensus 276 t~ee~~~l~~~dp~~~~~~~~~Sm~rhv~ 304 (552)
T 2fkn_A 276 SLDEADRLRQDTPELYVRLAKQSMKKHVE 304 (552)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 35678888899999999999998877643
No 64
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=37.74 E-value=25 Score=23.41 Aligned_cols=48 Identities=15% Similarity=0.238 Sum_probs=35.0
Q ss_pred CCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 29 QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 29 ~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
-|-....+..+...|..-|..-+++ -+..|..|.+.|.++.++.-+++
T Consensus 134 ~Wldp~~~~~~a~~I~~~L~~~dP~------~a~~y~~N~~~~~~~L~~Ld~~~ 181 (291)
T 1pq4_A 134 IWLSPTLVKRQATTIAKELAELDPD------NRDQYEANLAAFLAELERLNQEL 181 (291)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHCGG------GHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHCcc------cHHHHHHHHHHHHHHHHHHHHHH
Confidence 3877777788888888888854433 36678889899988887765544
No 65
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=37.51 E-value=43 Score=24.89 Aligned_cols=29 Identities=17% Similarity=0.297 Sum_probs=23.8
Q ss_pred ccHHHHHHHHhCHHHHHHHHHHHHHHHhh
Q 034713 56 ANSEAARMFSENKREYNRRVREIVEQSWT 84 (86)
Q Consensus 56 ~n~~aa~~~~~~~~~f~~~~~~~~~~~~~ 84 (86)
.-.|+..+..+|++.|.+.|++...++.+
T Consensus 275 t~ee~~~l~~~dp~~~~~~~~~Sm~rhv~ 303 (551)
T 1x87_A 275 TLDEAAELRARDPKQYIARAKQSIAAHVR 303 (551)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 34677888899999999999998877643
No 66
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=36.99 E-value=44 Score=24.86 Aligned_cols=29 Identities=0% Similarity=-0.107 Sum_probs=23.8
Q ss_pred ccHHHHHHHHhCHHHHHHHHHHHHHHHhh
Q 034713 56 ANSEAARMFSENKREYNRRVREIVEQSWT 84 (86)
Q Consensus 56 ~n~~aa~~~~~~~~~f~~~~~~~~~~~~~ 84 (86)
.-.|+..+..+|++.|.+.|++...++.+
T Consensus 280 t~ee~~~l~~~dp~~~~~~~~~Sm~rhv~ 308 (557)
T 1uwk_A 280 TWEQYRDRAQTEPAAVVKAAKQSMAVHVQ 308 (557)
T ss_dssp CHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 34677888899999999999998877643
No 67
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=36.35 E-value=7.2 Score=26.80 Aligned_cols=11 Identities=36% Similarity=0.558 Sum_probs=8.8
Q ss_pred ccccccCCCce
Q 034713 11 VLAKVYADGSI 21 (86)
Q Consensus 11 ~HPNV~~~G~v 21 (86)
.||||+.+|+-
T Consensus 6 lhpnvyatg~~ 16 (358)
T 2c1l_A 6 LHPNVYATGRP 16 (358)
T ss_dssp EETTTEESSSC
T ss_pred cCCceeecCCC
Confidence 59999988763
No 68
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=33.76 E-value=32 Score=22.84 Aligned_cols=47 Identities=13% Similarity=0.321 Sum_probs=34.2
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 30 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 30 W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
|-...++..+...|..-|..-++++ +..|..|.+.|.++.++.-+++
T Consensus 124 Wldp~~~~~~a~~I~~~L~~~dP~~------a~~y~~N~~~~~~~L~~Ld~~~ 170 (286)
T 3gi1_A 124 WTDPVLAGEEAVNIAKELGRLDPKH------KDSYTKNAKAFKKEAEQLTEEY 170 (286)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHCGGG------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHHHHHHChhh------HHHHHHHHHHHHHHHHHHHHHH
Confidence 7666778888888888888544332 5678888888888877765554
No 69
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=33.31 E-value=33 Score=22.64 Aligned_cols=47 Identities=15% Similarity=0.244 Sum_probs=33.9
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 30 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 30 W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
|-....+..+...|..-|..-+++ -+..|..|.+.|.++.++.-+++
T Consensus 119 Wldp~~~~~~a~~I~~~L~~~dP~------~a~~y~~N~~~~~~~L~~Ld~~~ 165 (284)
T 2prs_A 119 WLSPEIARATAVAIHGKLVELMPQ------SRAKLDANLKDFEAQLASTETQV 165 (284)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHCGG------GHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhCch------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777788888888888854333 35678888888888877665544
No 70
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=32.15 E-value=35 Score=22.99 Aligned_cols=47 Identities=13% Similarity=0.355 Sum_probs=33.8
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 30 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 30 W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
|-....+..+...|..-|..-+++ -+..|..|.+.|.++.++.-+++
T Consensus 135 Wldp~n~~~~a~~I~~~L~~~DP~------~a~~Y~~N~~~~~~~L~~Ld~~~ 181 (312)
T 2o1e_A 135 WLSPVLAQKEVKNITAQIVKQDPD------NKEYYEKNSKEYIAKLQDLDKLY 181 (312)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHCGG------GHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHhCch------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 866677778888888888854333 36678888888888877655544
No 71
>3fap_B FRAP, FKBP12-rapamycin associated protein; complex, gene therapy, cell cycle; HET: ARD; 1.85A {Homo sapiens} SCOP: a.24.7.1 PDB: 2fap_B* 2rse_B 1nsg_B* 4fap_B* 1aue_A 2gaq_A 1fap_B*
Probab=31.71 E-value=72 Score=17.92 Aligned_cols=45 Identities=7% Similarity=0.142 Sum_probs=29.0
Q ss_pred ccHHHHHHHHHHhhc-CCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHhh
Q 034713 34 YDVAAILTSIQSLLC-DPNPNSPANSEAARMFSENKREYNRRVREIVEQSWT 84 (86)
Q Consensus 34 ~~l~~vl~~i~~ll~-~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~~~ 84 (86)
..+.++|..|..+|. .|+. +......+.| ..-.+.|++|.++|..
T Consensus 27 ~~m~~~L~pLh~~l~~~peT--~~E~sF~~~f----G~~L~~A~~~~~~y~~ 72 (94)
T 3fap_B 27 KGMFEVLEPLHAMMERGPQT--LKETSFNQAY----GRDLMEAQEWCRKYMK 72 (94)
T ss_dssp HHHHHHHHHHHHHHHHCCCS--HHHHHHHHHH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCC--HHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 357788888888888 4644 3333333344 3446778888888764
No 72
>2l09_A ASR4154 protein; proto-chlorophyllide reductase 57 KD subunit superfamily, ST genomics, PSI-2, protein structure initiative; NMR {Nostoc SP}
Probab=31.61 E-value=30 Score=18.17 Aligned_cols=29 Identities=17% Similarity=0.029 Sum_probs=21.3
Q ss_pred cHHHHHHHHhCHHHHHHHHHHHHHHHhhc
Q 034713 57 NSEAARMFSENKREYNRRVREIVEQSWTA 85 (86)
Q Consensus 57 n~~aa~~~~~~~~~f~~~~~~~~~~~~~~ 85 (86)
..||...+++=|-....+||.-+++||.+
T Consensus 6 t~EAe~~LkkIP~FVR~kvrr~tE~~Are 34 (62)
T 2l09_A 6 TSEAKTKLKNIPFFARSQAKARIEQLARQ 34 (62)
T ss_dssp CHHHHHHHHTSCGGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 35666677776666778888889888863
No 73
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=31.32 E-value=58 Score=16.89 Aligned_cols=20 Identities=10% Similarity=0.273 Sum_probs=17.0
Q ss_pred ccHHHHHHHHhCHHHHHHHH
Q 034713 56 ANSEAARMFSENKREYNRRV 75 (86)
Q Consensus 56 ~n~~aa~~~~~~~~~f~~~~ 75 (86)
.|++...+...|+++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 57888899999999998765
No 74
>2ys2_A Cytoplasmic tyrosine-protein kinase BMX; bone marrow tyrosine kinase gene in chromosome X protein, epithelial and endothelial tyrosine kinase, ETK; NMR {Homo sapiens}
Probab=31.12 E-value=10 Score=19.15 Aligned_cols=16 Identities=19% Similarity=0.528 Sum_probs=11.8
Q ss_pred CCccccccCCCc-eeec
Q 034713 9 CLVLAKVYADGS-ICLD 24 (86)
Q Consensus 9 ~i~HPNV~~~G~-vcl~ 24 (86)
.-|||.++.+|+ .|-.
T Consensus 13 ~~YHPg~~~~g~W~CC~ 29 (50)
T 2ys2_A 13 VKYHSGFFVDGKFLCCQ 29 (50)
T ss_dssp CCCCSSCEETTEESSSC
T ss_pred hhcCCCcccCCeECCCC
Confidence 359999998777 5554
No 75
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=30.84 E-value=87 Score=18.61 Aligned_cols=43 Identities=7% Similarity=0.175 Sum_probs=25.4
Q ss_pred cHHHHHHHHHHhhc-CCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHHh
Q 034713 35 DVAAILTSIQSLLC-DPNPNSPANSEAARMFSENKREYNRRVREIVEQSW 83 (86)
Q Consensus 35 ~l~~vl~~i~~ll~-~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~~ 83 (86)
.+.++|..+..++. .|.+ +......+.|. .-.+.|++|.++|.
T Consensus 58 ~m~~~L~pLh~~l~~~PeT--~~E~sF~~~fG----~~L~~A~~~~~~y~ 101 (126)
T 2npu_A 58 GMFEVLEPLHAMMERGPQT--LKETSFNQAYG----RDLMEAQEWCRKYM 101 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCC--HHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCC--HHHHHHHHHHh----HHHHHHHHHHHHHH
Confidence 34556666666677 5655 33333344443 33567888888876
No 76
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=30.70 E-value=38 Score=22.36 Aligned_cols=47 Identities=11% Similarity=0.270 Sum_probs=33.3
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 30 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 30 W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
|-...++..+...|..-|..-+++ -+..|..|.+.|.++.++.-+++
T Consensus 122 Wldp~~~~~~a~~I~~~L~~~dP~------~a~~y~~N~~~~~~~L~~Ld~~~ 168 (284)
T 3cx3_A 122 WLDPEKAGEEAQIIADKLSEVDSE------HKETYQKNAQAFIKKAQELTKKF 168 (284)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHSGG------GHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHhCcc------cHHHHHHHHHHHHHHHHHHHHHH
Confidence 766667778888888888753333 36678888888888777655543
No 77
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=30.52 E-value=39 Score=22.81 Aligned_cols=47 Identities=15% Similarity=0.339 Sum_probs=33.0
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 30 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 30 W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
|-....+..+...|..-|..-+++ -+..|..|.+.|.++.++.-+++
T Consensus 140 Wldp~n~~~~a~~I~~~L~~~DP~------~a~~Y~~N~~~~~~~L~~Ld~~~ 186 (313)
T 1toa_A 140 WFDVKLWSYSVKAVYESLCKLLPG------KTREFTQRYQAYQQQLDKLDAYV 186 (313)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHCGG------GHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHHHHHHChh------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 766667778888888888754333 25678888888888777655443
No 78
>2e6i_A Tyrosine-protein kinase ITK/TSK; BTK, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.48 E-value=15 Score=19.48 Aligned_cols=16 Identities=19% Similarity=0.358 Sum_probs=12.2
Q ss_pred CccccccCCCc-eeecc
Q 034713 10 LVLAKVYADGS-ICLDI 25 (86)
Q Consensus 10 i~HPNV~~~G~-vcl~~ 25 (86)
-|||.++.+|+ .|-..
T Consensus 14 ~yHPg~~~~GkW~CC~q 30 (64)
T 2e6i_A 14 KYHPNFWMDGKWRCCSQ 30 (64)
T ss_dssp EECSSCBCSSSBSSSCC
T ss_pred hcCCCceeCCeECCCCC
Confidence 49999998877 55543
No 79
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=29.78 E-value=46 Score=22.46 Aligned_cols=48 Identities=17% Similarity=0.421 Sum_probs=34.9
Q ss_pred CCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 29 QWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 29 ~W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
-|-...++..+...|..-|..-++++ +..|..|.+.|.++.++.-+++
T Consensus 132 vWldp~n~~~~a~~I~~~L~~~DP~~------a~~Y~~Na~~~~~~L~~Ld~~~ 179 (307)
T 3ujp_A 132 AWMSPRNALVYVENIRQAFVELDPDN------AKYYNANAAVYSEQLKAIDRQL 179 (307)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHCGGG------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCchh------HHHHHHHHHHHHHHHHHHHHHH
Confidence 38777778888888888887544433 5678888888888877765554
No 80
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=29.47 E-value=42 Score=22.41 Aligned_cols=47 Identities=13% Similarity=0.341 Sum_probs=35.2
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 30 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 30 W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
|-...++..+...|..-|..-++++ +..|..|.+.|.++.++.-+++
T Consensus 126 Wldp~~~~~~a~~I~~~L~~~dP~~------a~~y~~N~~~~~~~L~~Ld~~~ 172 (294)
T 3hh8_A 126 WLNLENGIIYSKNIAKQLIAKDPKN------KETYEKNLKAYVAKLEKLDKEA 172 (294)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHCGGG------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHHHHHHHHhCccc------hHHHHHHHHHHHHHHHHHHHHH
Confidence 8777778888888888888544433 5678888888888887766554
No 81
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=29.11 E-value=59 Score=17.49 Aligned_cols=21 Identities=10% Similarity=0.265 Sum_probs=18.3
Q ss_pred ccHHHHHHHHhCHHHHHHHHH
Q 034713 56 ANSEAARMFSENKREYNRRVR 76 (86)
Q Consensus 56 ~n~~aa~~~~~~~~~f~~~~~ 76 (86)
.|++...+...|+++|.+...
T Consensus 39 ~NPqL~q~I~~n~e~Fl~ll~ 59 (72)
T 1pve_A 39 ENPQLLQQISQHQEHFIQMLN 59 (72)
T ss_dssp TCHHHHHHHHTTHHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHHc
Confidence 678899999999999998764
No 82
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=28.78 E-value=57 Score=18.94 Aligned_cols=31 Identities=10% Similarity=0.085 Sum_probs=20.0
Q ss_pred ccCCCceeeccccCCCCCcccHHHHHHHHHH
Q 034713 15 VYADGSICLDILQNQWSPIYDVAAILTSIQS 45 (86)
Q Consensus 15 V~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ 45 (86)
|+++|.|-...........-++.+++..|..
T Consensus 132 iD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 132 LDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp ECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred EcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 3568888776655444444567788777764
No 83
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=26.62 E-value=49 Score=22.39 Aligned_cols=47 Identities=17% Similarity=0.423 Sum_probs=33.7
Q ss_pred CCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 30 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 30 W~p~~~l~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
|-....+..+...|..-|..-+++ -+..|..|.+.|.++..+.-+++
T Consensus 147 Wldp~n~~~~a~~I~~~L~~~DP~------~a~~Y~~Na~~~~~~L~~Ld~~~ 193 (321)
T 1xvl_A 147 WMSPRNALVYVENIRQAFVELDPD------NAKYYNANAAVYSEQLKAIDRQL 193 (321)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHCGG------GHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHCcc------cHHHHHHHHHHHHHHHHHHHHHH
Confidence 877777788888888888854433 25678888888888777655443
No 84
>3c9p_A Uncharacterized protein SP1917; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 1.96A {Streptococcus pneumoniae}
Probab=26.21 E-value=19 Score=21.44 Aligned_cols=18 Identities=22% Similarity=0.263 Sum_probs=14.3
Q ss_pred CCccccccC-CCceeeccc
Q 034713 9 CLVLAKVYA-DGSICLDIL 26 (86)
Q Consensus 9 ~i~HPNV~~-~G~vcl~~l 26 (86)
|-.|||-.- +|.||---+
T Consensus 67 P~lnP~~~lItGvICGvRV 85 (123)
T 3c9p_A 67 PYYVPERIAITGKICGVRI 85 (123)
T ss_dssp SCCCGGGGGCCSEETTEEG
T ss_pred cccCccHHHhcccccceeh
Confidence 468999986 999997544
No 85
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=25.70 E-value=54 Score=19.12 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=21.2
Q ss_pred ccCCCceeeccccCCCCCcccHHHHHHHHHH
Q 034713 15 VYADGSICLDILQNQWSPIYDVAAILTSIQS 45 (86)
Q Consensus 15 V~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ 45 (86)
|+++|.|-.......+...-++.+++..|..
T Consensus 135 iD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 135 LDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp ECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred ECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 4678988776554555555678888877754
No 86
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=23.54 E-value=90 Score=18.50 Aligned_cols=31 Identities=10% Similarity=-0.003 Sum_probs=21.8
Q ss_pred ccCCCceeeccccCCCCCcccHHHHHHHHHHhh
Q 034713 15 VYADGSICLDILQNQWSPIYDVAAILTSIQSLL 47 (86)
Q Consensus 15 V~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll 47 (86)
|+++|.|-.-. ..+.+...+.+++..|..+.
T Consensus 147 ID~~G~I~~~~--~~~~~~~~~~~il~~l~~l~ 177 (179)
T 3ixr_A 147 IGPTHRIVEAW--RQVKVPGHAEEVLNKLKAHA 177 (179)
T ss_dssp ECTTSBEEEEE--CSCCSTTHHHHHHHHHHHHH
T ss_pred ECCCCEEEEEE--cCCCCCCCHHHHHHHHHHHh
Confidence 46788877543 34566677888888887764
No 87
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=23.05 E-value=73 Score=20.53 Aligned_cols=37 Identities=14% Similarity=-0.016 Sum_probs=25.3
Q ss_pred ccCCCceeeccccCCCCCcccHHHHHHHHHHhhcCCC
Q 034713 15 VYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPN 51 (86)
Q Consensus 15 V~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll~~p~ 51 (86)
|+++|.|-...+.......-+..++|..|..+....-
T Consensus 143 ID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~~~~ 179 (224)
T 3keb_A 143 ADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQQAM 179 (224)
T ss_dssp ECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHHHC-
T ss_pred EcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhhccc
Confidence 4568888765554555555578899999988877543
No 88
>2j3t_C Trafficking protein particle complex subunit 1, trafficking protein particle complex subunit 3; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Mus musculus}
Probab=22.74 E-value=70 Score=19.12 Aligned_cols=40 Identities=15% Similarity=0.261 Sum_probs=27.2
Q ss_pred cccHHHHHHHHHH------hhcCC--CCCCCccHHHHHHHHhCHHHHHHHHHHHHHHH
Q 034713 33 IYDVAAILTSIQS------LLCDP--NPNSPANSEAARMFSENKREYNRRVREIVEQS 82 (86)
Q Consensus 33 ~~~l~~vl~~i~~------ll~~p--~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~ 82 (86)
..+++++|..|.+ .+.|| .++.|+. -+.|.+++++.++++
T Consensus 90 ~~~i~~~l~~iy~~lYv~~v~kNPfy~~~~pI~----------s~~Fd~~v~~~~~~~ 137 (145)
T 2j3t_C 90 VGPIRDVLHHIYSALYVEFVVKNPLCPLGQTVQ----------SELFRSRLDSYVRSL 137 (145)
T ss_dssp CCCCHHHHHHHHHTTHHHHTTTCTTSCTTSCCC----------CHHHHHHHHHHHTTS
T ss_pred cchHHHHHHHHHHHHHHHHHhcCCCCCCCCcee----------cHHHHHHHHHHHHhC
Confidence 4568888888874 66677 4556653 256777787777653
No 89
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=21.72 E-value=90 Score=17.79 Aligned_cols=31 Identities=10% Similarity=0.169 Sum_probs=21.3
Q ss_pred ccCCCceeeccccCCCCCcccHHHHHHHHHHhh
Q 034713 15 VYADGSICLDILQNQWSPIYDVAAILTSIQSLL 47 (86)
Q Consensus 15 V~~~G~vcl~~l~~~W~p~~~l~~vl~~i~~ll 47 (86)
|+++|.|-... ....+...+.+++..|..+.
T Consensus 131 id~~G~i~~~~--~~~~~~~~~~~il~~l~~l~ 161 (163)
T 3gkn_A 131 LSPEGQVVQAW--RKVKVAGHADAVLAALKAHA 161 (163)
T ss_dssp ECTTSCEEEEE--CSCCSTTHHHHHHHHHHHHC
T ss_pred ECCCCeEEEEE--cCCCcccCHHHHHHHHHHHh
Confidence 46788886543 34556667888888887764
Done!