Query 034719
Match_columns 86
No_of_seqs 102 out of 209
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 09:08:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034719.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034719hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtt1 f.23.34.1 (T:1-30) Pho 45.9 14 0.00099 17.5 3.4 22 4-25 2-23 (30)
2 d1of9a_ a.64.1.4 (A:) Ameobapo 19.6 23 0.0017 18.9 1.5 25 22-47 51-75 (77)
3 d1nkla_ a.64.1.1 (A:) NK-lysin 17.3 58 0.0042 16.9 2.9 26 21-47 49-74 (78)
4 d2gtga1 a.64.1.1 (A:2-79) Sapo 17.1 60 0.0043 16.7 2.9 19 28-47 57-75 (78)
5 d2fuea1 c.108.1.10 (A:13-256) 15.2 13 0.00093 22.1 -0.5 17 36-52 228-244 (244)
6 d1mmsa2 d.47.1.1 (A:8-70) Ribo 13.4 23 0.0017 19.4 0.3 14 35-48 24-37 (63)
7 d1l9la_ a.64.1.1 (A:) Granulys 12.9 96 0.007 16.1 3.1 25 21-46 49-73 (74)
8 g1jjo.1 e.1.1.1 (A:,C:,E:) Neu 11.3 26 0.0019 23.5 0.1 18 34-51 79-96 (334)
9 d1wiba_ d.47.1.1 (A:) 60S ribo 10.5 28 0.0021 20.3 0.1 13 36-48 42-54 (92)
10 d1n69a_ a.64.1.3 (A:) Saposin 10.2 1.3E+02 0.0093 15.6 3.0 23 23-47 53-75 (78)
No 1
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=45.90 E-value=14 Score=17.51 Aligned_cols=22 Identities=18% Similarity=0.161 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 034719 4 IFLFWFLMSAINIALIASTFYQ 25 (86)
Q Consensus 4 ~~~~~i~all~~~~ll~~~vy~ 25 (86)
+...|++-+-...++.|+.+|+
T Consensus 2 e~i~yv~ifac~i~lfffaiff 23 (30)
T d2axtt1 2 ETITYVFIFACIIALFFFAIFF 23 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceeehHHHHHHHHHHHHHHHHh
Confidence 5566766666666777776654
No 2
>d1of9a_ a.64.1.4 (A:) Ameobapore A {Entamoeba histolytica [TaxId: 5759]}
Probab=19.55 E-value=23 Score=18.86 Aligned_cols=25 Identities=12% Similarity=0.121 Sum_probs=16.9
Q ss_pred HHHHHHHHhhhccccCChHHHhhccc
Q 034719 22 TFYQLLCLLDLESDDINPFEASSRIN 47 (86)
Q Consensus 22 ~vy~li~l~DLe~D~iNp~d~c~~lN 47 (86)
.-|.=..++.++. ..||.+.|++++
T Consensus 51 ~~y~~~ii~~l~~-~~~p~~iC~~l~ 75 (77)
T d1of9a_ 51 DFGIDKLIQLIED-KVDANAICAKIH 75 (77)
T ss_dssp HHCHHHHHHHHHH-TCCHHHHHHHHS
T ss_pred HHHHHHHHHHHHH-cCCHHHHHHhcC
Confidence 3444555666666 449999998875
No 3
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=17.33 E-value=58 Score=16.92 Aligned_cols=26 Identities=12% Similarity=0.049 Sum_probs=17.5
Q ss_pred HHHHHHHHHhhhccccCChHHHhhccc
Q 034719 21 STFYQLLCLLDLESDDINPFEASSRIN 47 (86)
Q Consensus 21 ~~vy~li~l~DLe~D~iNp~d~c~~lN 47 (86)
+.-|.=..++.++. ..||.+.|+.++
T Consensus 49 v~~y~~~ii~~l~~-~~~p~~iC~~l~ 74 (78)
T d1nkla_ 49 MRSFLRRISWDILT-GKKPQAICVDIK 74 (78)
T ss_dssp HHHHHHHHHHHHHT-TCCHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh-CCCHHHHHhhhC
Confidence 33444455566655 569999999875
No 4
>d2gtga1 a.64.1.1 (A:2-79) Saposin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.06 E-value=60 Score=16.71 Aligned_cols=19 Identities=21% Similarity=0.190 Sum_probs=13.4
Q ss_pred HHhhhccccCChHHHhhccc
Q 034719 28 CLLDLESDDINPFEASSRIN 47 (86)
Q Consensus 28 ~l~DLe~D~iNp~d~c~~lN 47 (86)
.++.++. +.+|-+.|+.++
T Consensus 57 ii~~l~~-~~~p~~iC~~l~ 75 (78)
T d2gtga1 57 ILSILLE-EVSPELVCSMLH 75 (78)
T ss_dssp HHHHHHT-TCCHHHHHHHTT
T ss_pred HHHHHHh-CCCHHHHHHHcC
Confidence 3444544 679999999876
No 5
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.16 E-value=13 Score=22.07 Aligned_cols=17 Identities=18% Similarity=0.210 Sum_probs=14.4
Q ss_pred cCChHHHhhccccchHH
Q 034719 36 DINPFEASSRINFWVEP 52 (86)
Q Consensus 36 ~iNp~d~c~~lN~lv~P 52 (86)
-.||.|-.++++++++|
T Consensus 228 v~na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 228 VVSPQDTVQRCREIFFP 244 (244)
T ss_dssp CSSHHHHHHHHHHHHCT
T ss_pred cCCHHHHHHHHHHhcCC
Confidence 45999999999988887
No 6
>d1mmsa2 d.47.1.1 (A:8-70) Ribosomal protein L11, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=13.37 E-value=23 Score=19.41 Aligned_cols=14 Identities=29% Similarity=0.361 Sum_probs=11.5
Q ss_pred ccCChHHHhhcccc
Q 034719 35 DDINPFEASSRINF 48 (86)
Q Consensus 35 D~iNp~d~c~~lN~ 48 (86)
.=+|..|.|+..|.
T Consensus 24 ~GiNi~~F~k~fN~ 37 (63)
T d1mmsa2 24 HGVNIMEFCKRFNA 37 (63)
T ss_dssp TTCCHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHH
Confidence 34799999999984
No 7
>d1l9la_ a.64.1.1 (A:) Granulysin, NKG5 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.85 E-value=96 Score=16.11 Aligned_cols=25 Identities=12% Similarity=0.143 Sum_probs=17.3
Q ss_pred HHHHHHHHHhhhccccCChHHHhhcc
Q 034719 21 STFYQLLCLLDLESDDINPFEASSRI 46 (86)
Q Consensus 21 ~~vy~li~l~DLe~D~iNp~d~c~~l 46 (86)
..-|.=..++-|+... +|-+.|.+|
T Consensus 49 v~~Y~~~ii~~l~~~~-~P~~IC~~l 73 (74)
T d1l9la_ 49 MRRYQSRVIQGLVAGE-TAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHTTC-CHHHHHGGG
T ss_pred HHHHHHHHHHHHHHCC-CHHHHHHhh
Confidence 3445555666676655 999999876
No 8
>g1jjo.1 e.1.1.1 (A:,C:,E:) Neuroserpin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.25 E-value=26 Score=23.49 Aligned_cols=18 Identities=33% Similarity=0.462 Sum_probs=15.2
Q ss_pred cccCChHHHhhccccchH
Q 034719 34 SDDINPFEASSRINFWVE 51 (86)
Q Consensus 34 ~D~iNp~d~c~~lN~lv~ 51 (86)
-|+.||-+..+.+|+||-
T Consensus 79 vdF~~~~~~~~~IN~wv~ 96 (334)
T g1jjo.1 79 VDFSQNVAVANSINKWVE 96 (334)
T ss_dssp ECTTSHHHHHHHHHHHHH
T ss_pred EcCcChHHHHHHHHHHHH
Confidence 578899999999998864
No 9
>d1wiba_ d.47.1.1 (A:) 60S ribosomal protein L12 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.55 E-value=28 Score=20.31 Aligned_cols=13 Identities=15% Similarity=0.268 Sum_probs=11.2
Q ss_pred cCChHHHhhcccc
Q 034719 36 DINPFEASSRINF 48 (86)
Q Consensus 36 ~iNp~d~c~~lN~ 48 (86)
=+|+.++|+++|.
T Consensus 42 Gini~~f~k~fN~ 54 (92)
T d1wiba_ 42 GLSPKKVGDDIAK 54 (92)
T ss_dssp CSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4799999999995
No 10
>d1n69a_ a.64.1.3 (A:) Saposin B {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.16 E-value=1.3e+02 Score=15.63 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=15.4
Q ss_pred HHHHHHHhhhccccCChHHHhhccc
Q 034719 23 FYQLLCLLDLESDDINPFEASSRIN 47 (86)
Q Consensus 23 vy~li~l~DLe~D~iNp~d~c~~lN 47 (86)
-|.=..++-++ + .||-+.|++++
T Consensus 53 ~y~~~ii~~l~-~-~~P~~iC~~l~ 75 (78)
T d1n69a_ 53 QYSEIAIQMMM-H-MQPKEICALVG 75 (78)
T ss_dssp HHHHHHHHHHT-T-SCHHHHHHHTT
T ss_pred HHHHHHHHHHH-c-CCHHHHHhHcC
Confidence 34444555564 3 69999999875
Done!