BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034721
         (86 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|356573772|ref|XP_003555030.1| PREDICTED: probable galacturonosyltransferase 9-like [Glycine
          max]
          Length = 529

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/66 (60%), Positives = 52/66 (78%), Gaps = 4/66 (6%)

Query: 1  MAVAIRGGRGGTAVGPGLRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSPPP 60
          MAVA RG RGG++     RSLFS+RIF+SAMFSLLF+ATLSV+LT++PSTS+ DP  P  
Sbjct: 1  MAVATRGARGGSS----FRSLFSFRIFISAMFSLLFVATLSVLLTTNPSTSNDDPDLPTT 56

Query: 61 LHSFFH 66
           +++ H
Sbjct: 57 GNAYVH 62


>gi|449438749|ref|XP_004137150.1| PREDICTED: probable galacturonosyltransferase 9-like [Cucumis
          sativus]
 gi|449476425|ref|XP_004154733.1| PREDICTED: probable galacturonosyltransferase 9-like [Cucumis
          sativus]
          Length = 550

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 1/59 (1%)

Query: 1  MAVAIRGGRGGTAV-GPGLRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSP 58
          MAVA+RG RG +   G   R+ FSYRIF+SA+FSLLF+ATLSVI T++PST HHD   P
Sbjct: 1  MAVAVRGSRGASNFSGFNPRNFFSYRIFISALFSLLFIATLSVIFTTNPSTPHHDSALP 59


>gi|356545523|ref|XP_003541190.1| PREDICTED: probable galacturonosyltransferase 9-like [Glycine
          max]
          Length = 529

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/66 (56%), Positives = 50/66 (75%), Gaps = 4/66 (6%)

Query: 1  MAVAIRGGRGGTAVGPGLRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSPPP 60
          MAVA RG RGG++     RSLFS+RIF+SA+FSLLF+ATLSV+ T++PSTS+ D   P  
Sbjct: 1  MAVATRGARGGSS----FRSLFSFRIFISAIFSLLFVATLSVLFTTNPSTSNDDSDLPTT 56

Query: 61 LHSFFH 66
           +++ H
Sbjct: 57 GNAYVH 62


>gi|358343636|ref|XP_003635905.1| Glycosyltransferase [Medicago truncatula]
 gi|355501840|gb|AES83043.1| Glycosyltransferase [Medicago truncatula]
          Length = 555

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 4/66 (6%)

Query: 1  MAVAIRGGRGGTAVGPGLRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSPPP 60
          MAV+ RG RGG+     LR  FSYRIF+SAMFSLLF+ATLSV+ T++PST + D   P  
Sbjct: 1  MAVSGRGSRGGST----LRGFFSYRIFISAMFSLLFIATLSVLFTTNPSTENDDSDLPTT 56

Query: 61 LHSFFH 66
           +++ H
Sbjct: 57 GNAYVH 62


>gi|255579934|ref|XP_002530802.1| Glycosyltransferase QUASIMODO1, putative [Ricinus communis]
 gi|223529623|gb|EEF31570.1| Glycosyltransferase QUASIMODO1, putative [Ricinus communis]
          Length = 563

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/41 (73%), Positives = 34/41 (82%)

Query: 18 LRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSP 58
          LRS FSYRI VSAMF+LLFLATLSV+LT+HP TS H+   P
Sbjct: 22 LRSFFSYRILVSAMFTLLFLATLSVLLTTHPPTSPHESSLP 62


>gi|90657560|gb|ABD96860.1| hypothetical protein [Cleome spinosa]
          Length = 556

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/49 (63%), Positives = 34/49 (69%), Gaps = 2/49 (4%)

Query: 18 LRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSPPPLHSFFH 66
          LR LFSYRIFVSAMFSLLFLAT SV+L S  S  H DP  P    ++ H
Sbjct: 17 LRGLFSYRIFVSAMFSLLFLATFSVVLNS--SRQHQDPTLPNTGSAYMH 63


>gi|297828684|ref|XP_002882224.1| hypothetical protein ARALYDRAFT_477468 [Arabidopsis lyrata subsp.
          lyrata]
 gi|297328064|gb|EFH58483.1| hypothetical protein ARALYDRAFT_477468 [Arabidopsis lyrata subsp.
          lyrata]
          Length = 561

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 29/42 (69%)

Query: 17 GLRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSP 58
          GLRS FSYRIF+SA+FS LFLAT SV+L S     H D   P
Sbjct: 19 GLRSFFSYRIFISALFSFLFLATFSVVLNSSRHQPHQDHTLP 60


>gi|18396159|ref|NP_566170.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana]
 gi|26394254|sp|Q9FWA4.1|GAUT9_ARATH RecName: Full=Probable galacturonosyltransferase 9
 gi|10092184|gb|AAG12603.1|AC068900_9 unknown protein; 9779-11709 [Arabidopsis thaliana]
 gi|19310441|gb|AAL84957.1| AT3g02350/F11A12_103 [Arabidopsis thaliana]
 gi|21536764|gb|AAM61096.1| glycosyl transferase, putative [Arabidopsis thaliana]
 gi|28416491|gb|AAO42776.1| At3g02350/F11A12_103 [Arabidopsis thaliana]
 gi|332640274|gb|AEE73795.1| alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana]
          Length = 561

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 29/42 (69%)

Query: 17 GLRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSP 58
          GLRS FSYRIF+SA+FS LFLAT SV+L S     H D   P
Sbjct: 19 GLRSFFSYRIFISALFSFLFLATFSVVLNSSRHQPHQDHTLP 60


>gi|298204422|emb|CBI16902.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/39 (51%), Positives = 31/39 (79%)

Query: 20 SLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSP 58
          ++ SYRIF SA+F++LF+AT+SV+L ++P+   HD V P
Sbjct: 19 NIVSYRIFASALFTILFIATISVLLNTNPAPPSHDSVIP 57


>gi|147794385|emb|CAN73730.1| hypothetical protein VITISV_022574 [Vitis vinifera]
          Length = 543

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/39 (51%), Positives = 31/39 (79%)

Query: 20 SLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSP 58
          ++ SYRIF SA+F++LF+AT+SV+L ++P+   HD V P
Sbjct: 19 NIVSYRIFASALFTILFIATISVLLNTNPAPPSHDSVIP 57


>gi|359488313|ref|XP_002282423.2| PREDICTED: LOW QUALITY PROTEIN: probable galacturonosyltransferase
           9, partial [Vitis vinifera]
          Length = 595

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/39 (51%), Positives = 31/39 (79%)

Query: 20  SLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSP 58
           ++ SYRIF SA+F++LF+AT+SV+L ++P+   HD V P
Sbjct: 71  NIVSYRIFASALFTILFIATISVLLNTNPAPPSHDSVIP 109


>gi|224112273|ref|XP_002332802.1| glycosyltransferase [Populus trichocarpa]
 gi|222834237|gb|EEE72714.1| glycosyltransferase [Populus trichocarpa]
          Length = 564

 Score = 46.2 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/29 (65%), Positives = 25/29 (86%)

Query: 18 LRSLFSYRIFVSAMFSLLFLATLSVILTS 46
          LR  FSYRIF+SA+F+LLFLAT S++ +S
Sbjct: 20 LRPFFSYRIFISAIFTLLFLATFSILFSS 48


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.327    0.141    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,392,489,418
Number of Sequences: 23463169
Number of extensions: 45577596
Number of successful extensions: 215465
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 215437
Number of HSP's gapped (non-prelim): 19
length of query: 86
length of database: 8,064,228,071
effective HSP length: 56
effective length of query: 30
effective length of database: 6,750,290,607
effective search space: 202508718210
effective search space used: 202508718210
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 69 (31.2 bits)