BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034721
         (86 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9FWA4|GAUT9_ARATH Probable galacturonosyltransferase 9 OS=Arabidopsis thaliana
          GN=GAUT9 PE=2 SV=1
          Length = 561

 Score = 56.2 bits (134), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/42 (61%), Positives = 29/42 (69%)

Query: 17 GLRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSP 58
          GLRS FSYRIF+SA+FS LFLAT SV+L S     H D   P
Sbjct: 19 GLRSFFSYRIFISALFSFLFLATFSVVLNSSRHQPHQDHTLP 60


>sp|P35513|PAL2_TOBAC Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2
          Length = 712

 Score = 30.0 bits (66), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 11  GTAVGPGLRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHH 53
           GTAVG GL S+  +   V A+FS +  A  + ++   P  + H
Sbjct: 257 GTAVGSGLASMVLFDANVLAVFSEVLSAIFAEVMNGKPEFTDH 299


>sp|P45730|PALY_POPTR Phenylalanine ammonia-lyase OS=Populus trichocarpa GN=PAL PE=2 SV=1
          Length = 715

 Score = 29.6 bits (65), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 11  GTAVGPGLRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHH 53
           GTAVG GL S+  +   V A+ S L  A  + ++   P  + H
Sbjct: 260 GTAVGSGLASMVLFETNVLAVLSELLSAIFAEVMNGKPEFTDH 302


>sp|P45733|PAL3_TOBAC Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1
          Length = 712

 Score = 29.6 bits (65), Expect = 6.0,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 11  GTAVGPGLRSLFSYRIFVSAMFSLLFLATLSVILTSHPSTSHH 53
           GTAVG GL S+  +   + A+FS +  A  + ++   P  + H
Sbjct: 257 GTAVGSGLASMVLFDANILAVFSEVLSAIFAEVMNGKPEFTDH 299


>sp|Q95YM9|FGFR_HALRO Fibroblast growth factor receptor OS=Halocynthia roretzi GN=FGFR
          PE=2 SV=1
          Length = 763

 Score = 29.6 bits (65), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 23/46 (50%)

Query: 22 FSYRIFVSAMFSLLFLATLSVILTSHPSTSHHDPVSPPPLHSFFHL 67
          F  ++  +A   +LF  T++ IL S  ST    PV  P +  + HL
Sbjct: 4  FEVKVASTAFVLVLFSLTINQILASETSTKFRSPVPAPTVPDWNHL 49


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.327    0.141    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,141,605
Number of Sequences: 539616
Number of extensions: 1025388
Number of successful extensions: 4038
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4030
Number of HSP's gapped (non-prelim): 10
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)