Query 034729
Match_columns 85
No_of_seqs 127 out of 493
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 09:19:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034729.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034729hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lgta1 d.32.1.3 (A:2-132) 2,3 49.9 5.8 0.00042 22.7 2.7 26 30-62 105-130 (131)
2 d1b3ta_ d.58.8.1 (A:) Epstein 24.2 21 0.0015 22.2 2.1 28 33-61 69-96 (147)
3 d2zjda1 d.15.1.3 (A:2-120) Mic 21.9 26 0.0019 20.7 2.3 19 22-41 94-112 (119)
4 d3d32a1 d.15.1.3 (A:1-118) GAB 18.5 35 0.0025 20.1 2.3 19 22-41 93-111 (118)
5 d1eo6a_ d.15.1.3 (A:) Golgi-as 16.3 42 0.0031 19.7 2.3 19 22-41 91-109 (116)
6 d1va4a_ c.69.1.12 (A:) Arylest 14.9 41 0.003 19.4 1.9 9 43-51 22-30 (271)
7 d1vk3a4 d.139.1.1 (A:508-603) 14.6 32 0.0024 19.9 1.3 8 44-51 8-15 (96)
8 d1juoa_ a.39.1.8 (A:) Sorcin { 13.7 57 0.0041 18.9 2.4 11 14-24 110-120 (172)
9 d1sbpa_ c.94.1.1 (A:) Sulphate 13.1 51 0.0037 20.8 2.2 32 14-46 12-43 (309)
10 d1kw3b1 d.32.1.3 (B:1-132) 2,3 12.8 70 0.0051 17.7 2.6 17 31-50 106-122 (132)
No 1
>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}
Probab=49.85 E-value=5.8 Score=22.75 Aligned_cols=26 Identities=23% Similarity=0.186 Sum_probs=16.3
Q ss_pred cccCCCceeeeeeeeeEeeeCCCCCCCCCCCCC
Q 034729 30 FAAEDGSIPATFQVIFMTGWREHYSQPKPKRMG 62 (85)
Q Consensus 30 ~~~~dG~ipATfEVIy~~gWkp~~~qpkp~~~G 62 (85)
|+++||.. +|++|+..|... +|..+|
T Consensus 105 f~DPdGn~---iE~~~~~~~~~~----~pf~pg 130 (131)
T d1lgta1 105 FADPFGLP---LEIYYGASEVFE----KPFLPG 130 (131)
T ss_dssp EECTTSCE---EEEEECCCBCTT----SCCCCS
T ss_pred EECCCCCE---EEEEeCCCccCC----CCCCCC
Confidence 35677754 788777666643 355565
No 2
>d1b3ta_ d.58.8.1 (A:) Epstein barr virus nuclear antigen-1 (ebna1) {Epstein-Barr virus [TaxId: 10376]}
Probab=24.16 E-value=21 Score=22.24 Aligned_cols=28 Identities=18% Similarity=0.095 Sum_probs=21.2
Q ss_pred CCCceeeeeeeeeEeeeCCCCCCCCCCCC
Q 034729 33 EDGSIPATFQVIFMTGWREHYSQPKPKRM 61 (85)
Q Consensus 33 ~dG~ipATfEVIy~~gWkp~~~qpkp~~~ 61 (85)
+.+||.--+.+=|+++|.|.| ||-|+..
T Consensus 69 pe~RltpL~RLPyG~a~gpGP-qPgPl~E 96 (147)
T d1b3ta_ 69 PQCRLTPLSRLPFGMAPGPGP-QPGPLRE 96 (147)
T ss_dssp TTCEECCCEEEECCCCSSSSC-CCCTTCE
T ss_pred chhccccccccccCcCCCCCC-CCCcchh
Confidence 455666667888999999987 7877743
No 3
>d2zjda1 d.15.1.3 (A:2-120) Microtubule-associated proteins 1A/1B light chain 3B {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.89 E-value=26 Score=20.66 Aligned_cols=19 Identities=21% Similarity=0.384 Sum_probs=14.3
Q ss_pred HHHHHHhhcccCCCceeeee
Q 034729 22 TAAIYDSMFAAEDGSIPATF 41 (85)
Q Consensus 22 a~~~Y~~~~~~~dG~ipATf 41 (85)
+-++| +.++++||-|-.||
T Consensus 94 i~~lY-~~~kdeDGfLYi~Y 112 (119)
T d2zjda1 94 ISEVY-ESEKDEDGFLYMVY 112 (119)
T ss_dssp HHHHH-HHHCCTTSCEEEEE
T ss_pred HHHHH-HHcCCCCCeEEEEE
Confidence 46788 46688899877766
No 4
>d3d32a1 d.15.1.3 (A:1-118) GABA(A) receptor associated protein GABARAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.52 E-value=35 Score=20.13 Aligned_cols=19 Identities=16% Similarity=0.221 Sum_probs=13.7
Q ss_pred HHHHHHhhcccCCCceeeee
Q 034729 22 TAAIYDSMFAAEDGSIPATF 41 (85)
Q Consensus 22 a~~~Y~~~~~~~dG~ipATf 41 (85)
+-++| +.++++||-|-.||
T Consensus 93 i~~lY-~~~kdeDGfLYi~Y 111 (118)
T d3d32a1 93 MGQLY-QEHHEEDFFLYIAY 111 (118)
T ss_dssp HHHHH-HHHCCTTSCEEEEE
T ss_pred HHHHH-HHhCCCCcEEEEEE
Confidence 46788 46678899776665
No 5
>d1eo6a_ d.15.1.3 (A:) Golgi-associated ATPase enhancer of 16 kD, Gate-16 {Cow (Bos taurus) [TaxId: 9913]}
Probab=16.31 E-value=42 Score=19.69 Aligned_cols=19 Identities=21% Similarity=0.433 Sum_probs=14.0
Q ss_pred HHHHHHhhcccCCCceeeee
Q 034729 22 TAAIYDSMFAAEDGSIPATF 41 (85)
Q Consensus 22 a~~~Y~~~~~~~dG~ipATf 41 (85)
+.++|+ .++++||=|-.||
T Consensus 91 i~~lY~-~~KdeDGfLYi~Y 109 (116)
T d1eo6a_ 91 MGQLYE-KEKDEDGFLYVAY 109 (116)
T ss_dssp HHHHHH-HHCCTTSCEEEEE
T ss_pred HHHHHH-HcCCCCcEEEEEE
Confidence 567884 5578999776666
No 6
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens [TaxId: 294]}
Probab=14.92 E-value=41 Score=19.37 Aligned_cols=9 Identities=44% Similarity=1.010 Sum_probs=7.2
Q ss_pred eeeEeeeCC
Q 034729 43 VIFMTGWRE 51 (85)
Q Consensus 43 VIy~~gWkp 51 (85)
||++|||-.
T Consensus 22 vv~lHG~~~ 30 (271)
T d1va4a_ 22 VLFSHGWLL 30 (271)
T ss_dssp EEEECCTTC
T ss_pred EEEECCCCC
Confidence 888999863
No 7
>d1vk3a4 d.139.1.1 (A:508-603) Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 {Thermotoga maritima [TaxId: 2336]}
Probab=14.61 E-value=32 Score=19.92 Aligned_cols=8 Identities=38% Similarity=1.381 Sum_probs=6.9
Q ss_pred eeEeeeCC
Q 034729 44 IFMTGWRE 51 (85)
Q Consensus 44 Iy~~gWkp 51 (85)
||++||+.
T Consensus 8 VyavGw~D 15 (96)
T d1vk3a4 8 VFAVGWND 15 (96)
T ss_dssp EEEEEESS
T ss_pred EEEecccc
Confidence 79999985
No 8
>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.70 E-value=57 Score=18.92 Aligned_cols=11 Identities=18% Similarity=0.181 Sum_probs=5.0
Q ss_pred CCHHHHHHHHH
Q 034729 14 LNRETALATAA 24 (85)
Q Consensus 14 ~~R~~l~~a~~ 24 (85)
+....+..+..
T Consensus 110 ls~~~~~~l~~ 120 (172)
T d1juoa_ 110 LSPQAVNSIAK 120 (172)
T ss_dssp CCHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 34454444443
No 9
>d1sbpa_ c.94.1.1 (A:) Sulphate-binding protein {Salmonella typhimurium [TaxId: 90371]}
Probab=13.12 E-value=51 Score=20.84 Aligned_cols=32 Identities=13% Similarity=0.061 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHHHhhcccCCCceeeeeeeeeE
Q 034729 14 LNRETALATAAIYDSMFAAEDGSIPATFQVIFM 46 (85)
Q Consensus 14 ~~R~~l~~a~~~Y~~~~~~~dG~ipATfEVIy~ 46 (85)
.+|++|..+..++++.|..+.| +..+++..++
T Consensus 12 ~~~e~~~ei~~af~~~~~~~tG-~~V~v~~~~~ 43 (309)
T d1sbpa_ 12 PTRELYEQYNKAFSAHWKQETG-DNVVIDQSHG 43 (309)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHS-CEEEEEEEES
T ss_pred chHHHHHHHHHHHHHHHHHhcC-CCEEEEecCC
Confidence 4689999999999888755556 6666665543
No 10
>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}
Probab=12.82 E-value=70 Score=17.68 Aligned_cols=17 Identities=6% Similarity=-0.037 Sum_probs=11.4
Q ss_pred ccCCCceeeeeeeeeEeeeC
Q 034729 31 AAEDGSIPATFQVIFMTGWR 50 (85)
Q Consensus 31 ~~~dG~ipATfEVIy~~gWk 50 (85)
.++||.. +|++|+.++.
T Consensus 106 ~DPdGn~---iE~~~~~~~~ 122 (132)
T d1kw3b1 106 QDPFGLP---LEIYYGPAEI 122 (132)
T ss_dssp ECTTSCE---EEEEECCCBC
T ss_pred ECCCCCE---EEEEECCCcc
Confidence 4667744 7888776665
Done!