BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034730
(85 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48
PE=2 SV=2
Length = 349
Score = 141 bits (355), Expect = 1e-33, Method: Composition-based stats.
Identities = 63/80 (78%), Positives = 72/80 (90%)
Query: 4 IGTVEPTLEDFSEKKKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
+ +VEP +ED ++KKRVRNPLVP+GALMTAGVLTAGLISFR+GNS LGQ+LMRARVVVQ
Sbjct: 1 MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60
Query: 64 GATVGLMVGTAYYYGDTPWQ 83
GATV LMVGT YYYGD PW+
Sbjct: 61 GATVALMVGTGYYYGDNPWK 80
>sp|Q9BW72|HIG2A_HUMAN HIG1 domain family member 2A, mitochondrial OS=Homo sapiens
GN=HIGD2A PE=1 SV=1
Length = 106
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 12 EDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATV-G 68
E F EK +K NP+VPIG L TA LT GL SF +GNS QL+MR R+ QG TV
Sbjct: 33 ESFKEKFVRKTRENPVVPIGCLATAAALTYGLYSFHRGNSQRSQLMMRTRIAAQGFTVAA 92
Query: 69 LMVGTA 74
+++G A
Sbjct: 93 ILLGLA 98
>sp|Q9CQJ1|HIG2A_MOUSE HIG1 domain family member 2A OS=Mus musculus GN=Higd2a PE=2 SV=1
Length = 106
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 6 TVEPTLEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
TV E F EK +K NP+VPIG L TA LT GL F +G SH QL+MR R+ Q
Sbjct: 27 TVYSNPEGFKEKFIRKTRENPMVPIGCLGTAAALTYGLYCFHRGQSHRSQLMMRTRIAAQ 86
Query: 64 GAT-VGLMVGTA 74
G T V +++G A
Sbjct: 87 GFTVVAILLGLA 98
>sp|Q4VC39|HIG2B_HUMAN Putative HIG1 domain family member 2B OS=Homo sapiens GN=HIGD2B
PE=5 SV=1
Length = 106
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 6 TVEPTLEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
TV E F EK +K NP+VPIG L TA VLT GL F QGNS +L+M ++ Q
Sbjct: 27 TVYSNPEGFKEKFLRKTRENPVVPIGFLCTAAVLTNGLYCFHQGNSQCSRLMMHTQIAAQ 86
Query: 64 GATV-GLMVGTA 74
G T+ +++G A
Sbjct: 87 GFTIAAILLGLA 98
>sp|Q6CBQ8|RCF1_YARLI Respiratory supercomplex factor 1, mitochondrial OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=RCF1 PE=3 SV=2
Length = 140
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 31/62 (50%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDTPW 82
PLVP+G L T G L + R GN + ARV QG TV ++G A YYG P
Sbjct: 33 QPLVPLGCLATCGALILSARALRVGNKRQANRMFFARVAFQGLTVAALIGGAMYYGQDPK 92
Query: 83 QS 84
Q
Sbjct: 93 QK 94
>sp|Q2GMG9|RCF1_CHAGB Respiratory supercomplex factor 1, mitochondrial OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=RCF1 PE=3 SV=1
Length = 223
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGD 79
PLVPIG ++T T + R+G+ H Q + RARV QG TV MVG YY +
Sbjct: 33 EPLVPIGCILTIAAFTNAYRAMRRGDHHKVQRMFRARVAAQGFTVLAMVGGGMYYAE 89
>sp|A7TFU8|RCF1_VANPO Respiratory supercomplex factor 1, mitochondrial
OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
70294) GN=RCF1 PE=3 SV=1
Length = 162
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 13 DFSEKK--KRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLM 70
DF EK + + PLVPIG L+T G + S R GN + Q+ R RV +Q AT+ +
Sbjct: 21 DFMEKLVFRAKQQPLVPIGCLLTTGAIVLAAQSVRSGNKNKAQVFFRWRVGLQAATLVAL 80
Query: 71 VGTAYYYGDTPWQSK 85
+ +Y Y + K
Sbjct: 81 LAGSYIYSSNKAERK 95
>sp|Q7S455|RCF1_NEUCR Respiratory supercomplex factor 1, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=rcf-1 PE=3 SV=2
Length = 221
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 14 FSEKKKRVRN-PLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVG 72
F + +R+R PL+PIG + T T + R+G+ Q + RARV Q TV MV
Sbjct: 36 FQKVSRRLREEPLIPIGCIATVAAFTGAYRAMRRGDHEQVQRMFRARVAAQAFTVVAMVA 95
Query: 73 TAYYYG 78
++YY
Sbjct: 96 GSWYYA 101
>sp|Q6CWT4|RCF1_KLULA Respiratory supercomplex factor 1, mitochondrial OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=RCF1 PE=3 SV=1
Length = 158
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYG 78
+ PLVP+G L T G + +++ + GN Q+ R RV +QG T+ +V +Y YG
Sbjct: 30 QQPLVPLGTLATTGAVLLAVLNVKNGNKRKAQIWFRWRVALQGFTLIALVAGSYIYG 86
>sp|A8P006|RCF1_COPC7 Respiratory supercomplex factor 1, mitochondrial OS=Coprinopsis
cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC
9003) GN=RCF1 PE=3 SV=1
Length = 177
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 3 KIGTVEPT-LEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRAR 59
++ TV P E + EK +K NP VP+G L T G L + RQG S MRAR
Sbjct: 6 RVATVYPPGYETWGEKFQRKFKENPWVPLGCLATCGALLMSAVKMRQGRSKEMNYWMRAR 65
Query: 60 VVVQGAT-VGLMVGT 73
V +QG T V L+ G+
Sbjct: 66 VGLQGLTLVALVAGS 80
>sp|Q6FSW5|RCF1_CANGA Respiratory supercomplex factor 1, mitochondrial OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=RCF1 PE=3 SV=1
Length = 158
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDTP 81
+ PLVPIG L+T G + + R GN Q R RV +Q AT+ +V ++ YG
Sbjct: 30 QQPLVPIGTLLTTGAVILAAQNMRIGNRKKTQFYFRWRVGLQAATLAALVAGSFIYGKDK 89
Query: 82 WQSK 85
+ K
Sbjct: 90 YDQK 93
>sp|B0D4J7|RCF1_LACBS Respiratory supercomplex factor 1, mitochondrial OS=Laccaria
bicolor (strain S238N-H82 / ATCC MYA-4686) GN=RCF1 PE=3
SV=1
Length = 187
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 12 EDFSEKKKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMV 71
E FS K K NP VPIG + T G L + R G S +RARVV+QG T+ +V
Sbjct: 27 EKFSRKFKE--NPWVPIGCVATCGALIMSAVKMRAGKSTDMNYWLRARVVIQGVTIAALV 84
Query: 72 G 72
Sbjct: 85 A 85
>sp|Q9UTB1|YL87_SCHPO HIG1 domain-containing protein C25B8.07c, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC25B8.07c PE=4 SV=1
Length = 113
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 15 SEKKKRV--RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVG 72
SEK K V RNP +P+G LMT G A R+ N + MR RV+ QG T+ +
Sbjct: 28 SEKLKYVFVRNPFIPLGCLMTVGTFLASGYYIRRENHLMANKFMRYRVMSQGFTLAALAF 87
Query: 73 TAYYYG 78
+ + G
Sbjct: 88 SVLFIG 93
>sp|Q875C2|RCF1_PODAN Respiratory supercomplex factor 1, mitochondrial OS=Podospora
anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC
10383) GN=RCF1 PE=3 SV=1
Length = 218
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%)
Query: 24 PLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYY 77
PLVPIG L+T T + R+G+ Q + RARV Q TV MV YY
Sbjct: 38 PLVPIGCLLTVAAFTNAYRAMRRGDHAKVQKMFRARVAAQAFTVVAMVAGGMYY 91
>sp|Q756G1|RCF1_ASHGO Respiratory supercomplex factor 1, mitochondrial OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=RCF1 PE=3 SV=1
Length = 157
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYG 78
R PLVP G LMT G + + + R GN Q R RV +Q T+ ++ +++YG
Sbjct: 29 REPLVPAGVLMTTGAILLAIKNVRSGNRRNAQKWFRWRVGLQTGTLVALIAGSFFYG 85
>sp|C5DWC4|RCF1_ZYGRC Respiratory supercomplex factor 1, mitochondrial
OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732
/ NBRC 1130 / NCYC 568 / NRRL Y-229) GN=RCF1 PE=3 SV=1
Length = 160
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDT 80
+ PLVP+G L+T G + + R GN Q+ R RV +Q AT+ +V ++ YG +
Sbjct: 30 QQPLVPLGTLLTTGAVALAAQNVRTGNKKKAQVWFRWRVGLQAATLVALVAGSFIYGSS 88
>sp|Q03713|RCF1_YEAST Respiratory supercomplex factor 1, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RCF1 PE=1
SV=1
Length = 159
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDT 80
+ PLVPIG L+T G + + R GN Q R RV +Q AT+ +V ++ YG +
Sbjct: 30 KQPLVPIGCLLTTGAVILAAQNVRLGNKWKAQYYFRWRVGLQAATLVALVAGSFIYGTS 88
>sp|C8ZEH4|RCF1_YEAS8 Respiratory supercomplex factor 1, mitochondrial OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=RCF1 PE=3 SV=1
Length = 159
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDT 80
+ PLVPIG L+T G + + R GN Q R RV +Q AT+ +V ++ YG +
Sbjct: 30 KQPLVPIGCLLTTGAVILAAQNVRLGNKWKAQYYFRWRVGLQAATLVALVAGSFIYGTS 88
>sp|A6ZM32|RCF1_YEAS7 Respiratory supercomplex factor 1, mitochondrial OS=Saccharomyces
cerevisiae (strain YJM789) GN=RCF1 PE=3 SV=1
Length = 159
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDT 80
+ PLVPIG L+T G + + R GN Q R RV +Q AT+ +V ++ YG +
Sbjct: 30 KQPLVPIGCLLTTGAVILAAQNVRLGNKWKAQYYFRWRVGLQAATLVALVAGSFIYGTS 88
>sp|C7GT60|RCF1_YEAS2 Respiratory supercomplex factor 1, mitochondrial OS=Saccharomyces
cerevisiae (strain JAY291) GN=RCF1 PE=3 SV=1
Length = 159
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDT 80
+ PLVPIG L+T G + + R GN Q R RV +Q AT+ +V ++ YG +
Sbjct: 30 KQPLVPIGCLLTTGAVILAAQNVRLGNKWKAQYYFRWRVGLQAATLVALVAGSFIYGTS 88
>sp|B3LLM2|RCF1_YEAS1 Respiratory supercomplex factor 1, mitochondrial OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=RCF1 PE=3 SV=1
Length = 159
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDT 80
+ PLVPIG L+T G + + R GN Q R RV +Q AT+ +V ++ YG +
Sbjct: 30 KQPLVPIGCLLTTGAVILAAQNVRLGNKWKAQYYFRWRVGLQAATLVALVAGSFIYGTS 88
>sp|C4YRP9|RCF1_CANAW Respiratory supercomplex factor 1, mitochondrial OS=Candida
albicans (strain WO-1) GN=RCF1 PE=3 SV=1
Length = 155
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 19 KRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYG 78
K + P VP+G+L+TAG + S ++G Q R R+ Q AT+ +VG +YYG
Sbjct: 26 KSKQQPFVPLGSLLTAGAVLLAARSMKRGEKLKTQRYFRYRIGFQLATLVALVGGGFYYG 85
Query: 79 DTPWQSK 85
Q K
Sbjct: 86 TETSQHK 92
>sp|Q59N74|RCF1_CANAL Respiratory supercomplex factor 1, mitochondrial OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=RCF1 PE=3
SV=1
Length = 133
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 19 KRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYG 78
K + P VP+G+L+TAG + S ++G Q R R+ Q AT+ +VG +YYG
Sbjct: 4 KSKQQPFVPLGSLLTAGAVLLAARSMKRGEKLKTQRYFRYRIGFQLATLVALVGGGFYYG 63
Query: 79 DTPWQSK 85
Q K
Sbjct: 64 TETSQHK 70
>sp|Q4PIK6|RCF1_USTMA Respiratory supercomplex factor 1, mitochondrial OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=RCF1 PE=3 SV=1
Length = 214
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 18 KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYY 77
+K PLVPIG+L+T G L A R GN +R RV QG TV + ++YY
Sbjct: 50 RKMREQPLVPIGSLLTCGALIAASNHLRSGNRDQFNKALRWRVGFQGLTVLAALVGSFYY 109
Query: 78 G 78
G
Sbjct: 110 G 110
>sp|B9WHT6|RCF1_CANDC Respiratory supercomplex factor 1, mitochondrial OS=Candida
dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 /
NCPF 3949 / NRRL Y-17841) GN=RCF1 PE=3 SV=1
Length = 155
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 18 KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYY 77
+K + P VP+G+L+TAG + S ++G Q R R+ Q AT+ +VG +YY
Sbjct: 25 EKSKQQPFVPLGSLLTAGAVLLAARSMKRGEKLKTQRYFRYRIGFQLATLVALVGGGFYY 84
Query: 78 G 78
G
Sbjct: 85 G 85
>sp|A6SSX6|RCF1_BOTFB Respiratory supercomplex factor 1, mitochondrial OS=Botryotinia
fuckeliana (strain B05.10) GN=rcf1 PE=3 SV=1
Length = 175
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYY 77
PL+P+G ++T+ L S R G+ + Q + RAR+ QG T+ MV + Y+
Sbjct: 33 EPLIPLGCILTSLALVGASRSIRAGDHNRTQRMFRARIYAQGFTLLAMVAGSMYW 87
>sp|C5MAV2|RCF1_CANTT Respiratory supercomplex factor 1, mitochondrial OS=Candida
tropicalis (strain ATCC MYA-3404 / T1) GN=RCF1 PE=3
SV=1
Length = 155
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 8 EPTLED-FSEKKKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGAT 66
EP L D EK K+ PLVPIG+L+TAG + S ++G Q+ R R+ Q AT
Sbjct: 15 EPDLLDKMWEKSKQ--QPLVPIGSLLTAGAVFLAARSMKRGEKVKTQIYFRYRIGFQLAT 72
Query: 67 VGLMVGTAYYYG 78
+ +V YYG
Sbjct: 73 LAALVLGGMYYG 84
>sp|A4RI25|RCF1_MAGO7 Respiratory supercomplex factor 1, mitochondrial OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=RCF1 PE=3 SV=1
Length = 213
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 18 KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYY 77
+K + PLVP+G ++T T + R G+ + R R+ QG T+ MV YY
Sbjct: 37 RKLKQEPLVPLGCVLTVAAFTGAYRAMRAGDHGRVNRMFRYRIAAQGFTILAMVAGGIYY 96
Query: 78 GD 79
D
Sbjct: 97 SD 98
>sp|C7YJ02|RCF1_NECH7 Respiratory supercomplex factor 1, mitochondrial OS=Nectria
haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC
9596 / MPVI) GN=RCF1 PE=3 SV=1
Length = 230
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATV-GLMVGTAYYYGD 79
PL+P+G +T+ + R+G+S + RARV QG TV ++ G+ YY D
Sbjct: 38 EPLIPLGIGLTSLAFVNAYRALRRGDSKQANRMFRARVAAQGFTVIAMLAGSMYYQKD 95
>sp|C9SF29|RCF1_VERA1 Respiratory supercomplex factor 1, mitochondrial OS=Verticillium
albo-atrum (strain VaMs.102 / ATCC MYA-4576 / FGSC
10136) GN=RCF1 PE=3 SV=1
Length = 220
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 24 PLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATV-GLMVGTAYYYGD 79
PL+P+GA +T T R+G+ + RARV QG TV ++ G+ YY D
Sbjct: 40 PLIPLGAGLTVFAFTQAWRPMRRGDQVSANKMFRARVAAQGFTVLAMIAGSMYYNKD 96
>sp|A5DHC2|RCF1_PICGU Respiratory supercomplex factor 1, mitochondrial OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=RCF1 PE=3 SV=1
Length = 150
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 19 KRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGAT-VGLMVGTAYYY 77
K + PLVPIGAL T G + S R+G+ Q+ R R+ Q T V L+ G YY
Sbjct: 10 KSKQQPLVPIGALATTGAIILASKSIRRGDRIKTQIYFRYRIGFQLLTLVALVAGGLYYQ 69
Query: 78 GDTPWQSK 85
+T Q +
Sbjct: 70 TETAQQKQ 77
>sp|C5DLZ7|RCF1_LACTC Respiratory supercomplex factor 1, mitochondrial OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=RCF1 PE=3 SV=1
Length = 160
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYG 78
+ PLVP+G L T + + R GN Q R RV +QGAT+ +V ++ YG
Sbjct: 30 QQPLVPLGTLATTVAVILAAQNVRSGNKRKAQKYFRWRVGLQGATLVALVAGSFIYG 86
>sp|B2WBP3|RCF1_PYRTR Respiratory supercomplex factor 1, mitochondrial OS=Pyrenophora
tritici-repentis (strain Pt-1C-BFP) GN=rcf1 PE=3 SV=1
Length = 167
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMV-GTAYYYGD 79
PLVP+G +T + S R+G+ + L R R+ QG T+ ++V G Y+ D
Sbjct: 37 EPLVPLGCGLTVWAIVGATRSMRKGDHKMTNLYFRRRLYAQGFTIAVLVAGNMYWQKD 94
>sp|C4Y631|RCF1_CLAL4 Respiratory supercomplex factor 1, mitochondrial OS=Clavispora
lusitaniae (strain ATCC 42720) GN=RCF1 PE=3 SV=1
Length = 140
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGAT-VGLMVGTAYYYGDTP 81
PLVP+G L+T + S +QG Q R RV Q T V L++G YY ++
Sbjct: 14 QPLVPLGTLLTTAAVVLAAKSLKQGRKKDTQRYFRYRVGFQAFTLVALVIGGMYYQKESA 73
Query: 82 WQSK 85
Q +
Sbjct: 74 EQKQ 77
>sp|Q0V4P1|RCF1_PHANO Respiratory supercomplex factor 1, mitochondrial OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=RCF1 PE=3 SV=1
Length = 168
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVG-LMVGTAYYYGD 79
PL+P G +TA + S R+G+ + L R R+ Q T+ L++G Y+ D
Sbjct: 38 EPLIPFGCGLTAWAIVGASRSMRKGDHKMTNLYFRRRLYAQSFTIAVLVIGNLYWQKD 95
>sp|B6K2Z6|RCF1_SCHJY Respiratory supercomplex factor 1, mitochondrial
OS=Schizosaccharomyces japonicus (strain yFS275 /
FY16936) GN=rcf1 PE=3 SV=1
Length = 106
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 4 IGTVEPTL--EDFSEKKKRVRN-----PLVPIGALMTAGVLTAGLISFRQGNSHLGQLLM 56
I EPT D +E R+++ PL+PIG T G + R+G+S
Sbjct: 11 IKLSEPTESGNDTTETSGRLKHLFRDQPLIPIGCAATVGAFLFATRAIRRGDSMRANRFF 70
Query: 57 RARVVVQGATVGLMVGTAY 75
R RV+ Q ATV +VG +
Sbjct: 71 RYRVLAQAATVLAIVGGVF 89
>sp|C4QV79|RCF1_PICPG Respiratory supercomplex factor 1, mitochondrial OS=Komagataella
pastoris (strain GS115 / ATCC 20864) GN=RCF1 PE=3 SV=1
Length = 152
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYY 77
PLVPIG L T + R G+ Q R RV +QG T+ +VG +Y Y
Sbjct: 32 QPLVPIGCLATCVAVALAAKGVRTGDRVNAQKWFRWRVGLQGLTLVALVGGSYIY 86
>sp|A7F679|RCF1_SCLS1 Respiratory supercomplex factor 1, mitochondrial OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rcf1
PE=3 SV=1
Length = 210
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 9 PTLEDFSEKKKRVRNPLV-PIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATV 67
P+L S +K + +PL P G ++T L S R G+ + Q + RAR+ QG T+
Sbjct: 52 PSLHHPSTQK--LTHPLTHPPGCILTTLALVGATRSIRAGDHNRTQRMFRARIYAQGFTL 109
Query: 68 GLMVGTAYYY 77
MV + Y+
Sbjct: 110 LAMVAGSMYW 119
>sp|A2QI79|RCF1_ASPNC Respiratory supercomplex factor 1, mitochondrial OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=rcf1 PE=3
SV=1
Length = 177
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 8 EPTLEDFSEKKKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATV 67
E +L+ F + K PL+P+G T+ L S + G+S + RAR+ Q T+
Sbjct: 18 ETSLQKFRRRLKE--EPLIPLGCAATSYALYRAYRSMKAGDSVEMNKMFRARIYAQFFTL 75
Query: 68 GLMVGTAYYYGDTPWQSK 85
+V YYG Q +
Sbjct: 76 IAVVAGGMYYGSERKQRR 93
>sp|A3LVL1|RCF1_PICST Respiratory supercomplex factor 1, mitochondrial
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=RCF1 PE=3 SV=1
Length = 131
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGAT-VGLMVGTAYYYGDTP 81
P+VP+GAL T G + S ++G Q+ R RVV Q T V L+ G ++
Sbjct: 8 QPVVPLGALATTGAIILAARSMKRGEKLRTQVYFRYRVVFQLITLVALVAGGVMMQQESA 67
Query: 82 WQSK 85
Q K
Sbjct: 68 EQKK 71
>sp|A5E2M7|RCF1_LODEL Respiratory supercomplex factor 1, mitochondrial OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=RCF1 PE=3 SV=1
Length = 154
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDTPW 82
P VPIG+L+TAG + S ++G Q R R+ Q AT+ +V G +
Sbjct: 30 QPFVPIGSLLTAGAVILAARSMKRGEKLKTQKYFRYRIGFQLATLIALVAGGVTLGQSSL 89
Query: 83 QSK 85
+ K
Sbjct: 90 EQK 92
>sp|C5P447|RCF1_COCP7 Respiratory supercomplex factor 1, mitochondrial OS=Coccidioides
posadasii (strain C735) GN=RCF1 PE=3 SV=1
Length = 180
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 18 KKRVRN-PLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGAT-VGLMVGTAY 75
++R+R PL+P+G T+ L S + G+S + R R+ Q T V ++VG Y
Sbjct: 26 RRRLREEPLIPLGCAATSYALWRAYKSMKAGDSDQLNRMFRYRIYAQAFTLVAVVVGGIY 85
Query: 76 YYGD 79
Y +
Sbjct: 86 YKSE 89
>sp|B6H465|RCF1_PENCW Respiratory supercomplex factor 1, mitochondrial OS=Penicillium
chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin
54-1255) GN=rcf1 PE=3 SV=1
Length = 179
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 6 TVEPTLEDFSEKKKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGA 65
T E ++ F+ + K PLVP+G T L S + G+S + RAR+ Q
Sbjct: 18 TEETGMQKFTRRLKE--EPLVPLGCAATCYALYRAYRSMKSGDSVEMNRMFRARIYAQAF 75
Query: 66 T-VGLMVGTAYY 76
T V L+ G Y+
Sbjct: 76 TLVALVAGGMYF 87
>sp|Q6BIT1|RCF1_DEBHA Respiratory supercomplex factor 1, mitochondrial OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=RCF1 PE=3 SV=2
Length = 175
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYY 77
+ PLVP+G + T G + S R+G+ Q R RV Q AT+ +V Y +
Sbjct: 32 QQPLVPLGVIATTGAIFLATKSIRKGDRVNTQKYFRYRVGFQLATLIALVAGGYMF 87
>sp|C0RYW2|RCF1_PARBP Respiratory supercomplex factor 1, mitochondrial
OS=Paracoccidioides brasiliensis (strain Pb03) GN=RCF1
PE=3 SV=1
Length = 144
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDTPW 82
PL+PIG T+ L S + G+S + RAR+ T+ +V YYG+
Sbjct: 32 EPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAFTLFAIVAGGIYYGNERR 91
Query: 83 QSK 85
Q K
Sbjct: 92 QRK 94
>sp|C1G794|RCF1_PARBD Respiratory supercomplex factor 1, mitochondrial
OS=Paracoccidioides brasiliensis (strain Pb18) GN=RCF1
PE=3 SV=1
Length = 144
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDTPW 82
PL+PIG T+ L S + G+S + RAR+ T+ +V YYG+
Sbjct: 32 EPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAFTLFAIVAGGIYYGNERR 91
Query: 83 QSK 85
Q K
Sbjct: 92 QRK 94
>sp|C0NUL6|RCF1_AJECG Respiratory supercomplex factor 1, mitochondrial OS=Ajellomyces
capsulata (strain G186AR / H82 / ATCC MYA-2454 / RMSCC
2432) GN=RCF1 PE=3 SV=1
Length = 145
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDTPW 82
PL+PIG T+ L S + G+S + RAR+ T+ +V YYG
Sbjct: 32 EPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAFTLFAIVAGGIYYGQERR 91
Query: 83 QSK 85
Q K
Sbjct: 92 QRK 94
>sp|C6H220|RCF1_AJECH Respiratory supercomplex factor 1, mitochondrial OS=Ajellomyces
capsulata (strain H143) GN=RCF1 PE=3 SV=1
Length = 145
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDTPW 82
PL+PIG T+ L S + G+S + RAR+ T+ +V YYG
Sbjct: 32 EPLIPIGYAATSYALWRAYKSMKAGDSVELNRMFRARIYGHAFTLFAIVAGGIYYGQERR 91
Query: 83 QSK 85
Q K
Sbjct: 92 QRK 94
>sp|A6RBB3|RCF1_AJECN Respiratory supercomplex factor 1, mitochondrial OS=Ajellomyces
capsulata (strain NAm1 / WU24) GN=RCF1 PE=3 SV=1
Length = 145
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%)
Query: 23 NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYGDTPW 82
PL+PIG T+ L S + G+S + RAR+ T+ +V YYG
Sbjct: 32 EPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAFTLFAIVAGGIYYGQERR 91
Query: 83 QSK 85
Q K
Sbjct: 92 QRK 94
>sp|Q4WP59|RCF1_ASPFU Respiratory supercomplex factor 1, mitochondrial OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=rcf1 PE=3 SV=1
Length = 181
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 8 EPTLEDFSEKKKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATV 67
E +L+ F + K PL+P+G T L S + G+S + RAR+ Q T+
Sbjct: 19 ETSLQKFRRRLKE--EPLIPLGCAATCYALYRAYRSMKAGDSVEMNKMFRARIYAQFFTL 76
Query: 68 GLMVGTAYYY 77
+V YY
Sbjct: 77 VAVVAGGMYY 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,915,058
Number of Sequences: 539616
Number of extensions: 1018901
Number of successful extensions: 2708
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2645
Number of HSP's gapped (non-prelim): 67
length of query: 85
length of database: 191,569,459
effective HSP length: 56
effective length of query: 29
effective length of database: 161,350,963
effective search space: 4679177927
effective search space used: 4679177927
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)