BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034732
(85 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M531|H2A_EUPES Histone H2A OS=Euphorbia esula PE=2 SV=1
Length = 153
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/74 (85%), Positives = 71/74 (95%)
Query: 1 MESGGKVKRGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYL 60
M++G K+K+GAG RKGGGPKKKPVSRSVKAGLQFPVGRIGR+LKKGRY+QRVG+GAPVYL
Sbjct: 1 MDTGAKLKKGAGERKGGGPKKKPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYL 60
Query: 61 AAVLEYLAAEVVLL 74
AAVLEYLAAEV+ L
Sbjct: 61 AAVLEYLAAEVLEL 74
>sp|Q75L11|H2A6_ORYSJ Probable histone H2A.6 OS=Oryza sativa subsp. japonica
GN=Os05g0113900 PE=2 SV=2
Length = 156
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/71 (87%), Positives = 65/71 (91%)
Query: 4 GGKVKRGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAV 63
GGK + A GRK GGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRY+QRVGTGAPVYLAAV
Sbjct: 6 GGKAAKKAVGRKLGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAV 65
Query: 64 LEYLAAEVVLL 74
LEYLAAEV+ L
Sbjct: 66 LEYLAAEVLEL 76
>sp|A2XZN0|H2A6_ORYSI Probable histone H2A.6 OS=Oryza sativa subsp. indica
GN=OsI_017523 PE=3 SV=2
Length = 156
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/71 (87%), Positives = 65/71 (91%)
Query: 4 GGKVKRGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAV 63
GGK + A GRK GGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRY+QRVGTGAPVYLAAV
Sbjct: 6 GGKAAKKAVGRKLGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAV 65
Query: 64 LEYLAAEVVLL 74
LEYLAAEV+ L
Sbjct: 66 LEYLAAEVLEL 76
>sp|P25469|H2A1_SOLLC Histone H2A.1 OS=Solanum lycopersicum PE=2 SV=1
Length = 146
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/77 (74%), Positives = 66/77 (85%), Gaps = 1/77 (1%)
Query: 6 KVKRGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLE 65
K +GAGGRKGG P+KK V++S+KAGLQFPVGRIGRYLKKGRY+QRVG+GAP+YLAAVLE
Sbjct: 5 KTTKGAGGRKGG-PRKKSVTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPIYLAAVLE 63
Query: 66 YLAAEVVLLVLFYAACN 82
YLAAEV+ L A N
Sbjct: 64 YLAAEVLELAGNAARDN 80
>sp|Q9LZ46|H2A4_ARATH Probable histone H2A.4 OS=Arabidopsis thaliana GN=At5g02560 PE=1
SV=1
Length = 153
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 70/75 (93%), Gaps = 1/75 (1%)
Query: 1 MESGGKVKRGAGGRKGGG-PKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVY 59
M+SG KVK+GA GR+ GG PKKKPVSRSVK+GLQFPVGRIGRYLKKGRYS+RVGTGAPVY
Sbjct: 1 MDSGTKVKKGAAGRRSGGGPKKKPVSRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVY 60
Query: 60 LAAVLEYLAAEVVLL 74
LAAVLEYLAAEV+ L
Sbjct: 61 LAAVLEYLAAEVLEL 75
>sp|Q94E96|H2A5_ORYSJ Probable histone H2A.5 OS=Oryza sativa subsp. japonica
GN=Os01g0502700 PE=2 SV=1
Length = 159
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/61 (88%), Positives = 58/61 (95%)
Query: 14 RKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVL 73
RK GGP+KK VSRSVKAGLQFPVGRIGRYLKKGRY+QR+GTGAPVYLAAVLEYLAAEV+
Sbjct: 19 RKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLE 78
Query: 74 L 74
L
Sbjct: 79 L 79
>sp|A2WQG7|H2A5_ORYSI Probable histone H2A.5 OS=Oryza sativa subsp. indica
GN=OsI_002060 PE=3 SV=1
Length = 159
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/61 (88%), Positives = 58/61 (95%)
Query: 14 RKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVL 73
RK GGP+KK VSRSVKAGLQFPVGRIGRYLKKGRY+QR+GTGAPVYLAAVLEYLAAEV+
Sbjct: 19 RKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLE 78
Query: 74 L 74
L
Sbjct: 79 L 79
>sp|Q9FJE8|H2A7_ARATH Probable histone H2A.7 OS=Arabidopsis thaliana GN=At5g59870 PE=1
SV=1
Length = 150
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/75 (74%), Positives = 64/75 (85%), Gaps = 1/75 (1%)
Query: 1 MESGGKVKRGAGGRKG-GGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVY 59
MES GKVK+ GGRK G PK K VS+S+KAGLQFPVGRI R+LKKGRY+QR+G GAPVY
Sbjct: 1 MESTGKVKKAFGGRKPPGAPKTKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVY 60
Query: 60 LAAVLEYLAAEVVLL 74
+AAVLEYLAAEV+ L
Sbjct: 61 MAAVLEYLAAEVLEL 75
>sp|P02277|H2A3_WHEAT Histone H2A.2.2 OS=Triticum aestivum PE=1 SV=1
Length = 151
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 61/70 (87%)
Query: 13 GRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVV 72
G+K GGP+KK V+RS+KAGLQFPVGRIGRYLKKGRY+QRVG+GAPVYLAAVLEYLAAEV+
Sbjct: 11 GKKFGGPRKKSVTRSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVL 70
Query: 73 LLVLFYAACN 82
L A N
Sbjct: 71 ELAGNAAKDN 80
>sp|P40280|H2A_MAIZE Histone H2A OS=Zea mays PE=2 SV=1
Length = 159
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/61 (88%), Positives = 57/61 (93%)
Query: 14 RKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVL 73
RK GGP+KK VSRSVKAGLQFPVGRIGRYLKKGRY+Q VGTGAPVYLAAVLEYLAAEV+
Sbjct: 19 RKVGGPRKKSVSRSVKAGLQFPVGRIGRYLKKGRYAQXVGTGAPVYLAAVLEYLAAEVLE 78
Query: 74 L 74
L
Sbjct: 79 L 79
>sp|Q94F49|H2A5_ARATH Probable histone H2A.5 OS=Arabidopsis thaliana GN=At5g27670 PE=1
SV=1
Length = 150
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 63/77 (81%), Gaps = 4/77 (5%)
Query: 1 MESG---GKVKRGAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAP 57
MES K RGAGGRKGG +KK VS+SVKAGLQFPVGRI RYLKKGRY+ R G+GAP
Sbjct: 1 MESSQATTKPTRGAGGRKGGD-RKKSVSKSVKAGLQFPVGRIARYLKKGRYALRYGSGAP 59
Query: 58 VYLAAVLEYLAAEVVLL 74
VYLAAVLEYLAAEV+ L
Sbjct: 60 VYLAAVLEYLAAEVLEL 76
>sp|Q43213|H2A5_WHEAT Protein H2A.5 OS=Triticum aestivum GN=H2A-2 PE=2 SV=3
Length = 145
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%), Gaps = 1/62 (1%)
Query: 13 GRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVV 72
GRKGG +KK V+RSVKAGLQFPVGRIGRYLKKGRY+QRVG+GAPVYLAAVLEYLAAEV+
Sbjct: 3 GRKGGD-RKKAVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVL 61
Query: 73 LL 74
L
Sbjct: 62 EL 63
>sp|P02275|H2A1_WHEAT Histone H2A.1 OS=Triticum aestivum GN=H2A-9 PE=1 SV=2
Length = 146
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/62 (85%), Positives = 58/62 (93%), Gaps = 1/62 (1%)
Query: 13 GRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVV 72
GRKGG +KK V+RSVKAGLQFPVGRIGRYLKKGRY+QRVG+GAPVYLAAVLEYLAAEV+
Sbjct: 3 GRKGGD-RKKAVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVL 61
Query: 73 LL 74
L
Sbjct: 62 EL 63
>sp|P02276|H2A2_WHEAT Histone H2A.2.1 OS=Triticum aestivum PE=1 SV=1
Length = 151
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/58 (84%), Positives = 56/58 (96%)
Query: 17 GGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
GGP+KK V++S+KAGLQFPVGRIGRYLKKGRY+QRVG+GAPVYLAAVLEYLAAEV+ L
Sbjct: 15 GGPRKKSVTKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLEL 72
>sp|P19177|H2A_PETCR Histone H2A OS=Petroselinum crispum PE=2 SV=1
Length = 149
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/56 (89%), Positives = 54/56 (96%)
Query: 19 PKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
P+KK V+RSVKAGLQFPVGRIGRYLKKGRY+QRVGTGAPVYLAAVLEYLAAEV+ L
Sbjct: 18 PRKKSVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLEL 73
>sp|Q2HU68|H2A1_MEDTR Probable histone H2A.1 OS=Medicago truncatula
GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1
Length = 148
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/56 (85%), Positives = 53/56 (94%)
Query: 19 PKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
P+KK V+RS +AGLQFPVGRIGRYLKKGRY+QRVGTGAPVYLAAVLEYLAAEV+ L
Sbjct: 18 PRKKSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLEL 73
>sp|Q43214|H2A6_WHEAT Protein H2A.6 OS=Triticum aestivum GN=H2A-3 PE=2 SV=3
Length = 148
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 13 GRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVV 72
GRKGG +KK V+RSVKAGLQFPVGRIGRYLKKGRY+Q VG+GAPVYLAAVLEYLAAEV+
Sbjct: 3 GRKGG-ERKKAVTRSVKAGLQFPVGRIGRYLKKGRYAQAVGSGAPVYLAAVLEYLAAEVL 61
Query: 73 LLVLFYAACN 82
L A N
Sbjct: 62 ELAGNAAKDN 71
>sp|Q6L500|H2A4_ORYSJ Probable histone H2A.4 OS=Oryza sativa subsp. japonica
GN=Os05g0461400 PE=2 SV=1
Length = 163
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/53 (92%), Positives = 52/53 (98%)
Query: 22 KPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
KPVSRSVKAGLQFPVGRIGRYLK+GRYSQR+GTGAPVYLAAVLEYLAAEV+ L
Sbjct: 25 KPVSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLEL 77
>sp|A2Y5G8|H2A4_ORYSI Probable histone H2A.4 OS=Oryza sativa subsp. indica
GN=OsI_019561 PE=3 SV=1
Length = 163
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/53 (92%), Positives = 52/53 (98%)
Query: 22 KPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
KPVSRSVKAGLQFPVGRIGRYLK+GRYSQR+GTGAPVYLAAVLEYLAAEV+ L
Sbjct: 25 KPVSRSVKAGLQFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLEL 77
>sp|Q1S053|H2A3_MEDTR Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1
Length = 152
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 50/51 (98%)
Query: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
V+RS++AGLQFPVGRIGRYLKKGRY+QRVGTGAPVYLAAVLEYLAAEV+ L
Sbjct: 25 VTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLEL 75
>sp|Q2HU65|H2A2_MEDTR Probable histone H2A.2 OS=Medicago truncatula
GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1
Length = 153
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 50/51 (98%)
Query: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
V+RS++AGLQFPVGRIGRYLKKGRY+QRVGTGAPVYLAAVLEYLAAEV+ L
Sbjct: 24 VTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLEL 74
>sp|P40281|H2A2_PEA Histone H2A.2 OS=Pisum sativum PE=2 SV=1
Length = 149
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/51 (88%), Positives = 50/51 (98%)
Query: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
V+RSV+AGLQFPVGRIGR+LKKGRY+QRVGTGAPVYLAAVLEYLAAEV+ L
Sbjct: 24 VTRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLEL 74
>sp|P25470|H2A1_PEA Histone H2A.1 OS=Pisum sativum PE=2 SV=1
Length = 150
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 50/51 (98%)
Query: 24 VSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
V+RSV+AGLQFPVGR+GR+LKKGRY+QRVGTGAPVYLAAVLEYLAAEV+ L
Sbjct: 24 VTRSVRAGLQFPVGRVGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLEL 74
>sp|P35064|H2AX_TETTS Histone H2A.X OS=Tetrahymena thermophila (strain SB210) GN=HTA1
PE=1 SV=2
Length = 138
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 48/53 (90%)
Query: 22 KPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
K VSRS +AGLQFPVGRI R+LK GRYS+RVGTGAPVYLAAVLEYLAAEV+ L
Sbjct: 18 KQVSRSARAGLQFPVGRISRFLKHGRYSERVGTGAPVYLAAVLEYLAAEVLEL 70
>sp|P02274|H2A1_TETPY Histone H2A.1 OS=Tetrahymena pyriformis GN=HTA2 PE=1 SV=2
Length = 133
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 22 KPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
K VSRS +AGLQFPVGRI R+LK GRYS+R+GTGAPVYLAAVLEYLAAEV+ L
Sbjct: 18 KQVSRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLEL 70
>sp|P35065|H2A1_TETTS Histone H2A.1 OS=Tetrahymena thermophila (strain SB210) GN=HTA2
PE=1 SV=2
Length = 133
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 22 KPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
K VSRS +AGLQFPVGRI R+LK GRYS+R+GTGAPVYLAAVLEYLAAEV+ L
Sbjct: 18 KQVSRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLEL 70
>sp|P02273|H2AX_TETPY Histone H2A.X OS=Tetrahymena pyriformis GN=HTA1 PE=1 SV=2
Length = 138
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 22 KPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
K VSRS +AGLQFPVGRI R+LK GRYS+R+GTGAPVYLAAVLEYLAAEV+ L
Sbjct: 18 KQVSRSARAGLQFPVGRISRFLKHGRYSERIGTGAPVYLAAVLEYLAAEVLEL 70
>sp|Q9C681|H2A1_ARATH Probable histone H2A.1 OS=Arabidopsis thaliana GN=At1g51060 PE=1
SV=1
Length = 132
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 52/65 (80%)
Query: 10 GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAA 69
G G G G KK +RS KAGLQFPVGRI R+LKKG+Y++RVG GAPVYLAAVLEYLAA
Sbjct: 3 GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 70 EVVLL 74
EV+ L
Sbjct: 63 EVLEL 67
>sp|Q43312|H2A7_WHEAT Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3
Length = 134
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 50/59 (84%)
Query: 16 GGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
G G KK +SRS KAGLQFPVGRI R+LK G+Y++RVG GAPVYLAAVLEYLAAEV+ L
Sbjct: 9 GSGAAKKAISRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLEL 67
>sp|O81826|H2A3_ARATH Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1
SV=1
Length = 131
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 52/65 (80%)
Query: 10 GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAA 69
G G + G G KK SRS KAGLQFPVGRI R+LK G+Y++RVG GAPVYLAAVLEYLAA
Sbjct: 3 GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 70 EVVLL 74
EV+ L
Sbjct: 63 EVLEL 67
>sp|P50567|H2A_CHLRE Histone H2A OS=Chlamydomonas reinhardtii GN=H2A-II PE=3 SV=1
Length = 129
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 52/64 (81%)
Query: 11 AGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAE 70
AG KG KK VSRS KAGLQFPVGRI RYLKKG+Y++R+G GAPVYLAAVLEYL AE
Sbjct: 2 AGRGKGKTSGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAE 61
Query: 71 VVLL 74
V+ L
Sbjct: 62 VLEL 65
>sp|P16865|H2A3_VOLCA Histone H2A-III OS=Volvox carteri PE=3 SV=1
Length = 129
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 52/64 (81%)
Query: 11 AGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAE 70
AG KG KK VSRS KAGLQFPVGRI RYLKKG+Y++R+G GAPVYLAAVLEYL AE
Sbjct: 2 AGRGKGKTAGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAE 61
Query: 71 VVLL 74
V+ L
Sbjct: 62 VLEL 65
>sp|P16866|H2A4_VOLCA Histone H2A-IV OS=Volvox carteri PE=3 SV=1
Length = 129
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 52/64 (81%)
Query: 11 AGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAE 70
AG KG KK VSRS KAGLQFPVGRI RYLKKG+Y++R+G GAPVYLAAVLEYL AE
Sbjct: 2 AGRGKGKTAGKKAVSRSSKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAE 61
Query: 71 VVLL 74
V+ L
Sbjct: 62 VLEL 65
>sp|Q6ZL42|H2A2_ORYSJ Probable histone H2A.2 OS=Oryza sativa subsp. japonica
GN=Os07g0545400 PE=2 SV=1
Length = 135
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 52/65 (80%)
Query: 10 GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAA 69
G G G G KK +SRS KAGLQFPVGRI R+LK G+Y++RVG GAPVYLAAVLEYLAA
Sbjct: 3 GRGKAIGSGAAKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 70 EVVLL 74
EV+ L
Sbjct: 63 EVLEL 67
>sp|A2YMC6|H2A2_ORYSI Probable histone H2A.2 OS=Oryza sativa subsp. indica
GN=OsI_025469 PE=3 SV=1
Length = 135
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 52/65 (80%)
Query: 10 GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAA 69
G G G G KK +SRS KAGLQFPVGRI R+LK G+Y++RVG GAPVYLAAVLEYLAA
Sbjct: 3 GRGKAIGSGAAKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 70 EVVLL 74
EV+ L
Sbjct: 63 EVLEL 67
>sp|P35063|H2AX_PICAB Histone H2AX OS=Picea abies PE=2 SV=1
Length = 138
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 52/65 (80%)
Query: 10 GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAA 69
GA G +G K VSRS KAGLQFPVGRI R+LK G+Y++RVG GAPVYLAAVLEYLAA
Sbjct: 5 GAKGGRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 64
Query: 70 EVVLL 74
EV+ L
Sbjct: 65 EVLEL 69
>sp|Q9LHQ5|H2A2_ARATH Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1
SV=1
Length = 132
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 50/65 (76%)
Query: 10 GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAA 69
G G G G KK SRS KAGLQFPVGRI R+LK G+Y+ RVG GAPVYLAAVLEYLAA
Sbjct: 3 GRGKTLGSGVAKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAA 62
Query: 70 EVVLL 74
EV+ L
Sbjct: 63 EVLEL 67
>sp|Q9LD28|H2A6_ARATH Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1
Length = 130
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 51/65 (78%)
Query: 10 GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAA 69
G G G G KK SRS KAGLQFPVGRI R+LK G+Y++RVG GAPVYLAAVLEYLAA
Sbjct: 3 GRGKTLGSGGAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 70 EVVLL 74
EV+ L
Sbjct: 63 EVLEL 67
>sp|Q9S9K7|H2AXB_ARATH Probable histone H2AXb OS=Arabidopsis thaliana GN=At1g54690 PE=1
SV=1
Length = 142
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/75 (66%), Positives = 56/75 (74%), Gaps = 3/75 (4%)
Query: 1 MESGGKVKRGAGGRKGGGPK-KKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVY 59
M SG GGR G PK K VSRS KAGLQFPVGRI R+LK G+Y++RVG GAPVY
Sbjct: 1 MSSGAGSGTTKGGR--GKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVY 58
Query: 60 LAAVLEYLAAEVVLL 74
L+AVLEYLAAEV+ L
Sbjct: 59 LSAVLEYLAAEVLEL 73
>sp|O04848|H2AXA_ARATH Probable histone H2AXa OS=Arabidopsis thaliana GN=At1g08880 PE=1
SV=1
Length = 142
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 55/68 (80%), Gaps = 3/68 (4%)
Query: 10 GAGGRKGG--GPK-KKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEY 66
G+G KGG PK K VSRS KAGLQFPVGRI R+LK G+Y++RVG GAPVYL+AVLEY
Sbjct: 6 GSGTTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEY 65
Query: 67 LAAEVVLL 74
LAAEV+ L
Sbjct: 66 LAAEVLEL 73
>sp|Q84NJ4|H2A3_ORYSJ Probable histone H2A.3 OS=Oryza sativa subsp. japonica
GN=Os08g0427700 PE=3 SV=1
Length = 134
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 50/65 (76%)
Query: 10 GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAA 69
G G G KK SRS KAGLQFPVGRI R+LK G+Y++RVG GAPVYLAAVLEYLAA
Sbjct: 3 GRGKAIGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 70 EVVLL 74
EV+ L
Sbjct: 63 EVLEL 67
>sp|A2YVE5|H2A3_ORYSI Probable histone H2A.3 OS=Oryza sativa subsp. indica
GN=OsI_028288 PE=3 SV=1
Length = 134
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 50/65 (76%)
Query: 10 GAGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAA 69
G G G KK SRS KAGLQFPVGRI R+LK G+Y++RVG GAPVYLAAVLEYLAA
Sbjct: 3 GRGKAIGSSAAKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62
Query: 70 EVVLL 74
EV+ L
Sbjct: 63 EVLEL 67
>sp|O65759|H2AX_CICAR Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1
Length = 139
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 53/64 (82%), Gaps = 3/64 (4%)
Query: 12 GGRKGGGPK-KKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAE 70
GGR G PK K VSRS KAGLQFPVGRI R+LK G+Y++RVG GAPVYL+AVLEYLAAE
Sbjct: 9 GGR--GKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAE 66
Query: 71 VVLL 74
V+ L
Sbjct: 67 VLEL 70
>sp|P40282|H2A_PLAFA Histone H2A OS=Plasmodium falciparum PE=2 SV=1
Length = 132
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 50/64 (78%)
Query: 11 AGGRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAE 70
A G+ G K S S KAGLQFPVGRIGRYLKKG+Y++RVG GAPVYLAAVLEYL AE
Sbjct: 3 AKGKTGRKKASKGTSNSAKAGLQFPVGRIGRYLKKGKYAKRVGAGAPVYLAAVLEYLCAE 62
Query: 71 VVLL 74
++ L
Sbjct: 63 ILEL 66
>sp|Q8LLP5|H2AXA_ORYSJ Probable histone H2AXa OS=Oryza sativa subsp. japonica
GN=Os03g0721900 PE=3 SV=1
Length = 137
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 22 KPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
K VSRS KAGLQFPVGRI RYLK G+Y++RVG GAPVYL+AVLEYLAAEV+ L
Sbjct: 17 KAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLEL 69
>sp|A2XLI0|H2AXA_ORYSI Probable histone H2AXa OS=Oryza sativa subsp. indica
GN=OsI_012923 PE=3 SV=1
Length = 137
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 22 KPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVVLL 74
K VSRS KAGLQFPVGRI RYLK G+Y++RVG GAPVYL+AVLEYLAAEV+ L
Sbjct: 17 KAVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVLEL 69
>sp|Q64598|H2A1F_RAT Histone H2A type 1-F OS=Rattus norvegicus PE=3 SV=3
Length = 130
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 52/70 (74%)
Query: 13 GRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVV 72
G++GG + K +RS +AGLQFPVGR+ R L+KG YS+RVG GAPVYLAAVLEYL AE++
Sbjct: 5 GKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEIL 64
Query: 73 LLVLFYAACN 82
L A N
Sbjct: 65 ELAANAARDN 74
>sp|Q4FZT6|H2A3_RAT Histone H2A type 3 OS=Rattus norvegicus PE=2 SV=3
Length = 130
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 13 GRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVV 72
G++GG + K SRS +AGLQFPVGR+ R L+KG YS+RVG GAPVYLAAVLEYL AE++
Sbjct: 5 GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEIL 64
Query: 73 LL 74
L
Sbjct: 65 EL 66
>sp|Q8BFU2|H2A3_MOUSE Histone H2A type 3 OS=Mus musculus GN=Hist3h2a PE=1 SV=3
Length = 130
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 13 GRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVV 72
G++GG + K SRS +AGLQFPVGR+ R L+KG YS+RVG GAPVYLAAVLEYL AE++
Sbjct: 5 GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEIL 64
Query: 73 LL 74
L
Sbjct: 65 EL 66
>sp|Q7L7L0|H2A3_HUMAN Histone H2A type 3 OS=Homo sapiens GN=HIST3H2A PE=1 SV=3
Length = 130
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%)
Query: 13 GRKGGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPVYLAAVLEYLAAEVV 72
G++GG + K SRS +AGLQFPVGR+ R L+KG YS+RVG GAPVYLAAVLEYL AE++
Sbjct: 5 GKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEIL 64
Query: 73 LL 74
L
Sbjct: 65 EL 66
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.141 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,392,779
Number of Sequences: 539616
Number of extensions: 1401871
Number of successful extensions: 4743
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4410
Number of HSP's gapped (non-prelim): 267
length of query: 85
length of database: 191,569,459
effective HSP length: 56
effective length of query: 29
effective length of database: 161,350,963
effective search space: 4679177927
effective search space used: 4679177927
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)