Query 034733
Match_columns 85
No_of_seqs 139 out of 1033
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 09:24:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034733.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034733hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h8g_A 5'-methylthioadenosine 99.8 1E-19 3.5E-24 130.0 11.3 84 2-85 184-267 (267)
2 3bsf_A AT4G34840, nucleosidase 99.8 3.9E-20 1.3E-24 130.8 8.2 84 2-85 171-254 (254)
3 4g41_A MTA/SAH nucleosidase; m 99.8 1.7E-18 5.9E-23 120.3 10.2 71 5-78 163-235 (236)
4 3o4v_A MTA/SAH nucleosidase; m 99.7 1.6E-17 5.3E-22 115.5 9.6 75 2-79 156-233 (234)
5 3eei_A 5-methylthioadenosine n 99.7 4.4E-17 1.5E-21 113.1 9.8 73 3-77 159-233 (233)
6 3dp9_A MTA/SAH nucleosidase; v 99.7 3.5E-17 1.2E-21 113.5 9.1 73 3-78 156-231 (231)
7 3nm6_B MTA/SAH nucleosidase; h 99.7 6.5E-17 2.2E-21 111.9 8.9 72 3-77 157-230 (230)
8 1zos_A 5'-methylthioadenosine 99.7 2.1E-16 7.1E-21 109.0 10.1 71 5-77 158-229 (230)
9 3bl6_A 5'-methylthioadenosine 99.7 2E-16 6.7E-21 109.2 8.6 71 5-77 159-230 (230)
10 1cb0_A Protein (5'-deoxy-5'-me 99.6 6.8E-15 2.3E-19 105.9 10.8 78 2-79 179-260 (283)
11 2a8y_A 5'-methylthioadenosine 99.5 3.3E-14 1.1E-18 102.2 10.2 78 2-79 172-252 (270)
12 1wta_A 5'-methylthioadenosine 99.5 2.8E-14 9.6E-19 102.8 9.7 78 2-79 177-257 (275)
13 2b94_A Purine nucleoside phosp 99.5 5E-15 1.7E-19 105.6 5.2 74 3-79 190-265 (267)
14 1odk_A Purine nucleoside phosp 99.5 4.1E-14 1.4E-18 98.5 8.1 61 3-63 164-225 (235)
15 1je0_A MTAP;, 5'-methylthioade 99.5 2.1E-14 7.1E-19 99.9 6.5 59 3-61 165-225 (236)
16 3ozb_A Methylthioadenosine pho 99.5 8.4E-14 2.9E-18 100.0 9.1 73 2-74 182-257 (259)
17 3odg_A Xanthosine phosphorylas 99.5 1.2E-13 4.1E-18 100.6 9.9 76 2-77 206-284 (287)
18 1z34_A Purine nucleoside phosp 99.5 1.3E-13 4.5E-18 95.9 8.9 60 3-62 164-224 (235)
19 1vhw_A Purine nucleoside phosp 99.5 1.6E-13 5.5E-18 97.0 8.6 71 3-77 167-238 (253)
20 1g2o_A Purine nucleoside phosp 99.5 2E-13 6.7E-18 98.5 8.9 76 2-77 190-268 (268)
21 3khs_A Purine nucleoside phosp 99.5 2.1E-13 7.1E-18 99.2 8.4 81 2-82 199-284 (285)
22 1vmk_A Purine nucleoside phosp 99.4 4.5E-13 1.6E-17 97.1 9.3 75 2-76 199-276 (277)
23 3fuc_A Purine nucleoside phosp 99.4 6.8E-13 2.3E-17 96.5 9.2 76 2-77 202-282 (284)
24 3phb_E Purine nucleoside phosp 99.4 8.9E-13 3E-17 97.5 9.3 78 2-79 237-319 (324)
25 3p0f_A Uridine phosphorylase 2 99.4 5.8E-13 2E-17 97.0 7.9 66 9-77 228-295 (297)
26 1tcv_A Purine-nucleoside phosp 99.4 6.6E-13 2.3E-17 96.5 8.1 77 2-78 204-285 (287)
27 1qe5_A Pentosyltransferase; en 99.4 1E-12 3.6E-17 94.6 8.9 74 2-75 189-265 (266)
28 3la8_A SMU.1229, putative puri 99.4 5.7E-13 2E-17 97.9 7.5 76 2-77 226-303 (303)
29 2p4s_A Purine nucleoside phosp 99.4 1.4E-12 4.9E-17 98.0 9.3 78 2-79 287-369 (373)
30 1ybf_A AMP nucleosidase; struc 99.4 1.2E-12 4E-17 93.4 6.6 46 4-49 171-216 (268)
31 1t8s_A AMP nucleosidase; alpha 99.3 1.9E-12 6.5E-17 100.0 7.8 72 4-78 389-464 (484)
32 3uaw_A PNP, purine nucleoside 99.3 1.6E-12 5.5E-17 91.1 6.8 46 3-48 164-209 (235)
33 3euf_A Uridine phosphorylase 1 99.3 3.7E-12 1.3E-16 94.1 8.4 67 9-78 257-325 (328)
34 3u40_A Pnpase, purine nucleosi 99.2 3.1E-11 1.1E-15 85.1 5.3 42 4-45 173-215 (242)
35 3ddo_A Urdpase, upase, uridine 99.1 7E-12 2.4E-16 88.8 1.0 46 4-49 182-233 (253)
36 3mb8_A Purine nucleoside phosp 99.0 1.5E-10 5.1E-15 83.7 4.7 40 6-46 175-214 (279)
37 3phc_A Purine nucleoside phosp 99.0 1.2E-10 4.2E-15 83.9 3.4 41 6-46 171-211 (275)
38 3qpb_A Uridine phosphorylase; 98.8 3.5E-10 1.2E-14 81.7 0.3 43 6-48 207-250 (282)
39 3bje_A Nucleoside phosphorylas 98.8 6.5E-09 2.2E-13 77.3 6.8 40 10-49 284-323 (349)
40 1w2w_B 5-methylthioribose-1-ph 73.3 2 7E-05 29.0 2.4 24 15-38 68-91 (191)
41 3o3m_B Beta subunit 2-hydroxya 67.8 27 0.00092 25.4 7.5 40 8-49 308-358 (385)
42 1t5o_A EIF2BD, translation ini 63.9 5.2 0.00018 29.4 3.0 21 18-38 244-264 (351)
43 1t9k_A Probable methylthioribo 63.5 5.3 0.00018 29.3 3.0 21 18-38 247-267 (347)
44 3a11_A Translation initiation 62.9 4.9 0.00017 29.3 2.7 21 18-38 229-249 (338)
45 2yvk_A Methylthioribose-1-phos 62.2 5.8 0.0002 29.5 3.0 22 17-38 271-292 (374)
46 2a0u_A Initiation factor 2B; S 61.1 6.2 0.00021 29.4 3.0 21 18-38 276-296 (383)
47 3ecs_A Translation initiation 61.0 6.4 0.00022 28.6 3.0 28 14-41 205-232 (315)
48 1vb5_A Translation initiation 54.4 15 0.0005 25.8 3.9 22 17-38 196-217 (276)
49 3cwc_A Putative glycerate kina 43.2 17 0.00058 27.2 2.9 21 22-42 309-329 (383)
50 1v71_A Serine racemase, hypoth 39.2 24 0.00081 24.7 3.0 18 21-38 86-103 (323)
51 1j0a_A 1-aminocyclopropane-1-c 38.9 21 0.00072 25.0 2.7 18 21-38 84-101 (325)
52 3l6b_A Serine racemase; pyrido 38.3 24 0.00084 25.1 3.0 18 21-38 88-105 (346)
53 3bc8_A O-phosphoseryl-tRNA(SEC 38.0 16 0.00056 27.6 2.1 26 16-48 214-239 (450)
54 3hl2_A O-phosphoseryl-tRNA(SEC 37.8 16 0.00056 28.3 2.1 23 21-48 235-257 (501)
55 2rkb_A Serine dehydratase-like 36.9 23 0.00079 24.6 2.6 18 21-38 66-83 (318)
56 3vc3_A Beta-cyanoalnine syntha 36.7 20 0.00069 25.6 2.4 18 21-38 99-116 (344)
57 1ve5_A Threonine deaminase; ri 36.0 24 0.00083 24.4 2.6 18 21-38 77-94 (311)
58 1z7w_A Cysteine synthase; tran 35.9 21 0.00073 24.9 2.4 18 21-38 79-96 (322)
59 1ve1_A O-acetylserine sulfhydr 35.8 22 0.00074 24.6 2.4 18 21-38 74-91 (304)
60 1y7l_A O-acetylserine sulfhydr 35.6 25 0.00085 24.4 2.6 18 21-38 74-91 (316)
61 1o58_A O-acetylserine sulfhydr 35.5 25 0.00086 24.4 2.6 18 21-38 77-94 (303)
62 2egu_A Cysteine synthase; O-ac 35.3 22 0.00076 24.6 2.4 18 21-38 77-94 (308)
63 2q3b_A Cysteine synthase A; py 34.9 23 0.00078 24.6 2.4 18 21-38 79-96 (313)
64 3dwg_A Cysteine synthase B; su 34.7 23 0.00078 25.0 2.4 18 21-38 85-102 (325)
65 2pqm_A Cysteine synthase; OASS 34.2 27 0.00091 24.8 2.6 18 21-38 90-107 (343)
66 2v03_A Cysteine synthase B; py 34.0 24 0.00083 24.4 2.4 18 21-38 73-90 (303)
67 4d9b_A D-cysteine desulfhydras 33.9 24 0.00082 25.0 2.4 18 21-38 95-112 (342)
68 3tbh_A O-acetyl serine sulfhyd 33.7 24 0.00083 25.0 2.4 19 21-39 84-102 (334)
69 1tzj_A ACC deaminase, 1-aminoc 33.5 25 0.00084 24.6 2.4 18 21-38 81-98 (338)
70 1f2d_A 1-aminocyclopropane-1-c 32.8 26 0.00088 24.7 2.4 18 21-38 81-98 (341)
71 1v8z_A Tryptophan synthase bet 32.3 31 0.001 24.7 2.7 18 21-38 111-128 (388)
72 4h27_A L-serine dehydratase/L- 31.5 31 0.0011 24.8 2.6 18 21-38 105-122 (364)
73 2gn0_A Threonine dehydratase c 31.3 32 0.0011 24.3 2.6 18 21-38 100-117 (342)
74 4d9i_A Diaminopropionate ammon 31.0 28 0.00096 25.2 2.4 18 21-38 124-141 (398)
75 3iau_A Threonine deaminase; py 31.0 38 0.0013 24.2 3.0 18 21-38 120-137 (366)
76 1wkv_A Cysteine synthase; homo 30.9 33 0.0011 25.1 2.7 18 21-38 157-174 (389)
77 1p5j_A L-serine dehydratase; l 29.8 34 0.0012 24.6 2.6 18 21-38 105-122 (372)
78 2b99_A Riboflavin synthase; lu 29.8 1.2E+02 0.004 19.8 6.4 24 21-46 81-104 (156)
79 1qop_B Tryptophan synthase bet 29.7 31 0.001 24.9 2.4 18 21-38 115-132 (396)
80 3pc3_A CG1753, isoform A; CBS, 28.9 31 0.0011 25.9 2.4 18 21-38 125-142 (527)
81 3aey_A Threonine synthase; PLP 28.8 32 0.0011 24.3 2.3 18 21-38 89-106 (351)
82 2o2e_A Tryptophan synthase bet 28.1 34 0.0011 25.2 2.4 18 21-38 142-159 (422)
83 2zsj_A Threonine synthase; PLP 28.0 34 0.0012 24.2 2.4 18 21-38 91-108 (352)
84 1x1q_A Tryptophan synthase bet 27.9 34 0.0012 25.0 2.4 18 21-38 138-155 (418)
85 3zcc_A HAMP, osmolarity sensor 26.8 10 0.00034 21.1 -0.6 50 23-75 63-112 (114)
86 4aec_A Cysteine synthase, mito 26.5 37 0.0013 25.4 2.4 19 21-39 187-205 (430)
87 2d1f_A Threonine synthase; ami 25.5 40 0.0014 24.0 2.4 18 21-38 97-114 (360)
88 1jbq_A B, cystathionine beta-s 24.7 42 0.0014 25.0 2.4 18 21-38 173-190 (435)
89 2yvq_A Carbamoyl-phosphate syn 21.2 65 0.0022 20.1 2.5 17 20-36 113-129 (143)
90 1e5x_A Threonine synthase; thr 21.2 60 0.0021 24.4 2.6 18 21-38 196-213 (486)
91 1tdj_A Biosynthetic threonine 20.7 72 0.0025 24.4 3.0 18 21-38 91-108 (514)
92 3qel_B Glutamate [NMDA] recept 20.7 67 0.0023 22.5 2.7 25 19-43 75-101 (364)
93 3ss7_X D-serine dehydratase; t 20.4 58 0.002 24.1 2.4 19 21-39 172-190 (442)
94 2cob_A LCOR protein; MLR2, KIA 20.3 21 0.00072 20.6 -0.0 17 19-35 27-44 (70)
No 1
>2h8g_A 5'-methylthioadenosine nucleosidase; protein-adenine complex, hydrolase; HET: ADE; 1.50A {Arabidopsis thaliana} PDB: 2qsu_A 2qtg_A* 2qtt_A* 3lgs_A*
Probab=99.82 E-value=1e-19 Score=130.02 Aligned_cols=84 Identities=74% Similarity=1.070 Sum_probs=75.7
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFINGKR 81 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~~~~~f~~~~~~~s~~~~~~v~~~l~~l~~~~ 81 (85)
++++.+.++++++++||||+||++++|+.+++||++||+|||++++...+.++|.+.+..++.++.+++.++|+.+.+++
T Consensus 184 ~~~~~~~l~~~ga~~veME~aa~a~va~~~gip~~~Ir~ISD~a~~~~~s~~~~~~~~~~aa~~~~~~l~~~l~~l~~~~ 263 (267)
T 2h8g_A 184 STQDETLIIANDATLKDMEGAAVAYVADLLKIPVVFLKAVTDLVDGDKPTAEEFLQNLTVVTAALEGTATKVINFINGRN 263 (267)
T ss_dssp CHHHHHHHHHTTCSEEESSHHHHHHHHHHTTCCEEEEEEEEEETTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHcCCeEEeccHHHHHHHHHHcCCCEEEEEEEEECccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 45566677888999999999999999999999999999999999876545788888888899999999999999999999
Q ss_pred ccCC
Q 034733 82 FSEL 85 (85)
Q Consensus 82 ~~~~ 85 (85)
+++|
T Consensus 264 ~~~~ 267 (267)
T 2h8g_A 264 LSDL 267 (267)
T ss_dssp GGGC
T ss_pred cccC
Confidence 9987
No 2
>3bsf_A AT4G34840, nucleosidase; alpha-beta, hydrolase; HET: ADE; 2.90A {Arabidopsis thaliana}
Probab=99.81 E-value=3.9e-20 Score=130.84 Aligned_cols=84 Identities=69% Similarity=1.060 Sum_probs=73.9
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFINGKR 81 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~~~~~f~~~~~~~s~~~~~~v~~~l~~l~~~~ 81 (85)
++++.+.+++++++++|||+||++++|+.+++||++||+|||++++..++.++|.+.+..++..+.+++.++|+.+.+++
T Consensus 171 ~~~~~~~~~~~g~~~veME~aa~a~va~~~~ip~~~Ir~ISD~a~~~~~s~~~~~~~~~~a~~~~~~~l~~~l~~l~~~~ 250 (254)
T 3bsf_A 171 SPHDEESITANDATVKDMEGAAVAYVADIFKVPTILIKGVTDIVDGNRPTSEEFLENLAAVTAKLDESLTKVIDFISGKC 250 (254)
T ss_dssp CHHHHHHHHHTTCSEEESSHHHHHHHHHHTTCCEEEEEEEEEETTTTCCSTTTTTSHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred CHHHHHHHHHcCCcEEECcHHHHHHHHHHcCCCEEEEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 45666677888999999999999999999999999999999999876533566777778888888999999999999999
Q ss_pred ccCC
Q 034733 82 FSEL 85 (85)
Q Consensus 82 ~~~~ 85 (85)
+++|
T Consensus 251 ~~~~ 254 (254)
T 3bsf_A 251 LSDL 254 (254)
T ss_dssp TTTC
T ss_pred cccC
Confidence 9987
No 3
>4g41_A MTA/SAH nucleosidase; mixed alpha/beta, hydrolase, S-adenosylhomocysteine, cleavag; HET: MTA; 1.45A {Streptococcus pyogenes}
Probab=99.77 E-value=1.7e-18 Score=120.27 Aligned_cols=71 Identities=25% Similarity=0.270 Sum_probs=59.5
Q ss_pred HHHHHHhc-CCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 034733 5 DETSITAN-DATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSVSQVIDFIN 78 (85)
Q Consensus 5 ~~~~~~~~-~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l~ 78 (85)
+.++.+++ +++++|||+||++++|+.+++||++||+|||+++++.+ +|++|...+ +.++++++.++|++|.
T Consensus 163 ~~~l~~~~~g~~~veME~aa~~~va~~~~~p~~~Ir~ISD~ad~~~~~~~~~~~~~A---a~~~a~~v~~~l~~lP 235 (236)
T 4g41_A 163 IDQIKTAFSNVLAVEMEGAAIAQAAHTAGKPFIVVRAMSDTAAHDANITFDQFIIEA---GKRSAQILMTFLENLP 235 (236)
T ss_dssp HHHHHHHSTTCCEEESSHHHHHHHHHHTTCCEEEEEEESSCTTCCCCSCHHHHHHHH---HHHHHHHHHHHHHTSC
T ss_pred HHHHHHHcCCCeEEechHHHHHHHHHHcCCCEEEEEEEEeCCCCcCcccHHHHHHHH---HHHHHHHHHHHHHHcC
Confidence 44555566 79999999999999999999999999999999998877 777776554 4556788999998764
No 4
>3o4v_A MTA/SAH nucleosidase; mixed alpha/beta dimer, hydrolase; HET: 4CT; 1.75A {Escherichia coli} SCOP: c.56.2.1 PDB: 1jys_A* 1nc1_A* 1nc3_A* 1y6q_A* 1y6r_A* 1z5p_A* 3df9_A* 1z5n_A* 1z5o_A* 4g89_A*
Probab=99.73 E-value=1.6e-17 Score=115.48 Aligned_cols=75 Identities=24% Similarity=0.352 Sum_probs=60.8
Q ss_pred CHHHHHHHHh-c-CCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 034733 2 SSQDETSITA-N-DATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSVSQVIDFIN 78 (85)
Q Consensus 2 ~~~~~~~~~~-~-~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l~ 78 (85)
++++.+.+++ + +++++|||++|++++|+.+|+||++||+|||+++++++ +|++|. ..++.++++++.++|+.|+
T Consensus 156 ~~~~~~~l~~~~~ga~~veME~aa~a~va~~~~ip~~~ir~ISD~a~~~~~~~~~~~~---~~aa~~~a~~v~~~l~~l~ 232 (234)
T 3o4v_A 156 GSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFL---AVAAKQSSLMVESLVQKLA 232 (234)
T ss_dssp SHHHHHHHHHHCTTEEEEESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCccEeehhHHHHHHHHHHhCCCEEEEEEEecCCCCcchhhHHHHH---HHHHHHHHHHHHHHHHHhc
Confidence 4555555555 4 89999999999999999999999999999999998775 555554 4456667889999999886
Q ss_pred c
Q 034733 79 G 79 (85)
Q Consensus 79 ~ 79 (85)
.
T Consensus 233 ~ 233 (234)
T 3o4v_A 233 H 233 (234)
T ss_dssp H
T ss_pred C
Confidence 4
No 5
>3eei_A 5-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN; HET: MTM; 1.78A {Neisseria meningitidis serogroup B} SCOP: c.56.2.1
Probab=99.71 E-value=4.4e-17 Score=113.12 Aligned_cols=73 Identities=21% Similarity=0.292 Sum_probs=58.1
Q ss_pred HHH-HHHHHhc-CCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 034733 3 SQD-ETSITAN-DATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFI 77 (85)
Q Consensus 3 ~~~-~~~~~~~-~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~~~~~f~~~~~~~s~~~~~~v~~~l~~l 77 (85)
+++ ..+.+.+ +++++|||++|++++|+.+|+||++||+|||.++++++ .+|.+....++.++++++.++|+.|
T Consensus 159 ~~~~~~l~~~~~ga~~veME~aa~a~~a~~~gip~~~ir~IsD~a~~~~~--~~~~~~~~~aa~~~~~~v~~~l~~l 233 (233)
T 3eei_A 159 SEGVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKAD--ISFDEFLKTAAANSAKMVAEIVKSL 233 (233)
T ss_dssp HHHHHHHHHHCTTEEEEESSHHHHHHHHHHTTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCceEEechHHHHHHHHHHcCCCEEEEEEEecCCCCcch--hhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 443 3444567 99999999999999999999999999999999998775 3344444556666788999998864
No 6
>3dp9_A MTA/SAH nucleosidase; vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocystei nucleosidase, butylthio dadme immucillin A, MTAN, hydrolase; HET: BIG; 2.30A {Vibrio cholerae} SCOP: c.56.2.1
Probab=99.71 E-value=3.5e-17 Score=113.51 Aligned_cols=73 Identities=23% Similarity=0.436 Sum_probs=58.3
Q ss_pred HHHHHH-HHhc-CCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 034733 3 SQDETS-ITAN-DATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSVSQVIDFIN 78 (85)
Q Consensus 3 ~~~~~~-~~~~-~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l~ 78 (85)
+++.+. .+++ +++++|||++|++++|+.+|+||++||+|||+++++++ +|++|.+ .++.++++++.++|+.|+
T Consensus 156 ~~~~~~l~~~~~g~~~veME~aa~a~~a~~~~ip~~~ir~ISD~a~~~~~~~~~~~~~---~aa~~~a~~v~~~l~~l~ 231 (231)
T 3dp9_A 156 AERQQFIRQHFPSVVAVEMEASAIAQTCHQFKVPFVVVRAISDVADKESPLSFEEFLP---LAAKSSSAMVLKMVELLK 231 (231)
T ss_dssp HHHHHHHHHHCTTEEEEESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHHH---HHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHhcCCCcEEechHHHHHHHHHHcCCCEEEEEEEecCCCCcccccHHHHHH---HHHHHHHHHHHHHHHhcC
Confidence 444444 4567 99999999999999999999999999999999998775 5555554 455666888999988763
No 7
>3nm6_B MTA/SAH nucleosidase; hydrolase; HET: ADE; 1.60A {Helicobacter pylori} SCOP: c.56.2.0 PDB: 3nm5_A* 3nm4_A* 4ffs_A*
Probab=99.70 E-value=6.5e-17 Score=111.91 Aligned_cols=72 Identities=22% Similarity=0.433 Sum_probs=57.0
Q ss_pred HHHHH-HHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 034733 3 SQDET-SITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 77 (85)
Q Consensus 3 ~~~~~-~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l 77 (85)
+++.+ +.++++++++|||++|++++|+.+|+||++||+|||+++++.+ +|++|.+. ++.++++++.++|+.|
T Consensus 157 ~~~~~~l~~~~ga~~veME~aa~a~~a~~~gi~~~~ir~IsD~a~~~~~~~~~~~~~~---a~~~~~~~~~~~l~~l 230 (230)
T 3nm6_B 157 KERKEFLVSEFKASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEKAGMSFDEFLEK---SAHTSAKFLKSMVDEL 230 (230)
T ss_dssp HHHHHHHHHHHCCSEEESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHHHHHHHHHHH---HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCcEEeccHHHHHHHHHHcCCCEEEEEEEecCCCCCCccCHHHHHHH---HHHHHHHHHHHHHHhC
Confidence 44444 4445799999999999999999999999999999999998764 55665554 4555678888888754
No 8
>1zos_A 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase; transition state, inhibitor, hydrolase; HET: MTM; 1.60A {Streptococcus pneumoniae R6} PDB: 3mms_A*
Probab=99.68 E-value=2.1e-16 Score=109.04 Aligned_cols=71 Identities=18% Similarity=0.254 Sum_probs=59.4
Q ss_pred HHHHHHhc-CCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 034733 5 DETSITAN-DATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFI 77 (85)
Q Consensus 5 ~~~~~~~~-~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~~~~~f~~~~~~~s~~~~~~v~~~l~~l 77 (85)
+..+.+++ +++++|||+++++++|+.+++||++||+|||+++++.+ .+|.+.+..++.++++++.++|+.+
T Consensus 158 ~~~l~~~~~g~~~veME~aa~~~~a~~~~~~~~~ir~IsD~~~~~~~--~~~~~~~~~aa~~~~~~~~~~l~~l 229 (230)
T 1zos_A 158 IEAIKSHFPEVLAVEMEGAAIAQAAHTLNLPVLVIRAMSDNANHEAN--IFFDEFIIEAGRRSAQVLLAFLKAL 229 (230)
T ss_dssp HHHHHHHCTTEEEEESSHHHHHHHHHHTTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCcEehhhHHHHHHHHHHcCCCEEEEEEeccCCCCcch--hhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44556778 99999999999999999999999999999999988763 4555555667777889999999876
No 9
>3bl6_A 5'-methylthioadenosine nucleosidase/S- adenosylhomocysteine nucleosidase; MTAN, alpha and beta proteins, hydrolase; HET: FMC; 1.70A {Staphylococcus aureus}
Probab=99.67 E-value=2e-16 Score=109.16 Aligned_cols=71 Identities=27% Similarity=0.376 Sum_probs=57.5
Q ss_pred HHHHHHhc-CCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 034733 5 DETSITAN-DATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVIDFI 77 (85)
Q Consensus 5 ~~~~~~~~-~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~~~~~f~~~~~~~s~~~~~~v~~~l~~l 77 (85)
+.++.+++ +++++|||+++++++|+.+++||++||+|||+++++.+ .+|.+....++.++++++.++|+.|
T Consensus 159 ~~~l~~~~~g~~~veME~a~~~~~a~~~~~~~~~ir~IsD~~~~~~~--~~~~~~~~~aa~~~~~~~~~~l~~~ 230 (230)
T 3bl6_A 159 RQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAE--MSFEAFLEKAAVSSSQTVEALVSQL 230 (230)
T ss_dssp HHHHHHHCTTEEEEESSHHHHHHHHHHHTCCEEEEEEEEECSSTTHH--HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCcEEEEchHHHHHHHHHHcCCCEEEEEEeccCCCCcch--hhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 44566788 99999999999999999999999999999999988764 3444444556667788888888753
No 10
>1cb0_A Protein (5'-deoxy-5'-methylthioadenosine phosphor; methylthioadenosine phosphorylase, purine nucleoside phospho purine salvage, adenine; HET: ADE; 1.70A {Homo sapiens} SCOP: c.56.2.1 PDB: 1cg6_A* 1k27_A* 1sd1_A* 1sd2_A* 3ozc_A* 3ozd_A* 3oze_A
Probab=99.60 E-value=6.8e-15 Score=105.93 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=66.5
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCC-C--CCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLV-D--GDKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 77 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a-~--~~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l 77 (85)
++...++++++++++||||+++++++|+.+|+||++||+|||++ + ++.+ ++++|.+.+.+++..+.+++.++|+.+
T Consensus 179 t~ae~~~~~~~Ga~~V~ME~aa~a~vA~~~gi~~~~i~~VSd~a~~~~~~~~~~~~e~~~~~~~~~~~~~~lv~~~i~~l 258 (283)
T 1cb0_A 179 SRAESFMFRTWGADVINMTTVPEVVLAKEAGICYASIAMATDYDCWKEHEEAVSVDRVLKTLKENANKAKSLLLTTIPQI 258 (283)
T ss_dssp CHHHHHHHHHTTCCEEESSHHHHHHHHHHTTCEEEEEEEEEECTTC-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCeEEeCcHHHHHHHHHHcCCCEEEEEEEEccccCcCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34445778888999999999999999999999999999999994 4 2334 799999999999888999999999998
Q ss_pred hc
Q 034733 78 NG 79 (85)
Q Consensus 78 ~~ 79 (85)
..
T Consensus 259 ~~ 260 (283)
T 1cb0_A 259 GS 260 (283)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 11
>2a8y_A 5'-methylthioadenosine phosphorylase (MTAP); alpha/beta, beta sheet, beta barrel, transferase; HET: MTA; 1.45A {Sulfolobus solfataricus} PDB: 3t94_A* 1v4n_A
Probab=99.55 E-value=3.3e-14 Score=102.22 Aligned_cols=78 Identities=18% Similarity=0.095 Sum_probs=69.7
Q ss_pred CHHHHHHHH-hcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC-CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 034733 2 SSQDETSIT-ANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG-DKP-TAEEFMQNLVAVTAALEQSVSQVIDFIN 78 (85)
Q Consensus 2 ~~~~~~~~~-~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~-~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l~ 78 (85)
|++..+.++ .+++++||||+++++++|+.+|+||++||+|||++++ +.+ ++++|.+.+.+++.++.+++.++|+.|.
T Consensus 172 t~ae~~~~~~~~GadaV~Me~a~ea~vA~~~gi~~~~i~~Vsd~a~~~~~~~~~ee~~~~~~~~~~~~~~lv~~~i~~l~ 251 (270)
T 2a8y_A 172 TRAESRTWREVYKADIIGMTLVPEVNLACEAQMCYATIAMVTDYDVFAEIPVTAEEVTRVMAENTEKAKKLLYALIQKLP 251 (270)
T ss_dssp CHHHHHHHHHTTCCCEEESSHHHHHHHHHHTTCEEEEEEEEEECTTSSSSCCCHHHHHHHHHHTHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHcCCEEECCcHHHHHHHHHHCCCCEEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 455667777 8899999999999999999999999999999999986 355 8999999999999999999999999986
Q ss_pred c
Q 034733 79 G 79 (85)
Q Consensus 79 ~ 79 (85)
.
T Consensus 252 ~ 252 (270)
T 2a8y_A 252 E 252 (270)
T ss_dssp S
T ss_pred h
Confidence 4
No 12
>1wta_A 5'-methylthioadenosine phosphorylase; A/B structure, transferase; HET: ADE; 1.78A {Aeropyrum pernix}
Probab=99.55 E-value=2.8e-14 Score=102.83 Aligned_cols=78 Identities=19% Similarity=0.121 Sum_probs=69.6
Q ss_pred CHHHHHHHH-hcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCC-Cc-cHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 034733 2 SSQDETSIT-ANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGD-KP-TAEEFMQNLVAVTAALEQSVSQVIDFIN 78 (85)
Q Consensus 2 ~~~~~~~~~-~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~-~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l~ 78 (85)
|++..+.++ ++++++||||+++++++|+.+|+||++||+|||++++. .+ ++++|.+.+.+++.++.+++.++|+.|.
T Consensus 177 t~ae~~~~~~~~GadaV~Me~a~ea~vA~~~gi~~~~i~~Vsd~a~~~~~~~~~~e~~~~~~~~~~~~~~lv~~~i~~l~ 256 (275)
T 1wta_A 177 TRAESRVWKDVFKADIIGMTLVPEINLACEAQLCYATLAMVTDYDVWADRPVTAEEVERVMISNVERARRMLYDVIPKLA 256 (275)
T ss_dssp CHHHHHHHHHTSCCSEEESSHHHHHHHHHHTTCEEEEEEEEEECTTSSSSCCCHHHHHHHHHHHHHHHHHHHHHHGGGCS
T ss_pred CHHHHHHHHHHcCCEEEcccHHHHHHHHHHCCCCEEEEEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 455666777 88999999999999999999999999999999999865 55 8999999999999999999999999986
Q ss_pred c
Q 034733 79 G 79 (85)
Q Consensus 79 ~ 79 (85)
.
T Consensus 257 ~ 257 (275)
T 1wta_A 257 G 257 (275)
T ss_dssp S
T ss_pred h
Confidence 3
No 13
>2b94_A Purine nucleoside phosphorylase; SGPP, structural genomics, PSI, protein structure initiative UDP, ontario/toronto SGC; 1.85A {Plasmodium knowlesi} PDB: 3emv_A 1sq6_A 2bsx_A* 3enz_A*
Probab=99.54 E-value=5e-15 Score=105.57 Aligned_cols=74 Identities=9% Similarity=-0.015 Sum_probs=56.4
Q ss_pred HHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCc-cHH-HHHHHHHHHHHHHHHHHHHHHHHhhc
Q 034733 3 SQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKP-TAE-EFMQNLVAVTAALEQSVSQVIDFING 79 (85)
Q Consensus 3 ~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~-~~~-~f~~~~~~~s~~~~~~v~~~l~~l~~ 79 (85)
+++.+++++++++++|||++|++++|+.+++||++||+|||++++... ++. +|. .+++.++.++++++|+.|..
T Consensus 190 ~~~~~~~~~~ga~~veME~aa~a~va~~~gip~~~Ir~IsD~~~~~~~~~~~~~~~---~~a~~~~~~~~l~~l~~l~~ 265 (267)
T 2b94_A 190 PTRLEDYSKANVAVVEMEVATLMVMGTLRKVKTGGIFIVDGCPLKWDEGDFDNNLV---PEKLENMIKISLETCARLAK 265 (267)
T ss_dssp CTTHHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEECGGGC-------CCC---HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHcCCeEEeCcHHHHHHHHHHcCCcEEEEEEEEcccccCccccCCHHHH---HHHHHHHHHHHHHHHHHHHh
Confidence 345677788899999999999999999999999999999999986653 333 333 33455567888888887753
No 14
>1odk_A Purine nucleoside phosphorylase; alpha-beta protein, transferase, riken structural genomics/proteomics initiative, RSGI; 1.9A {Thermus thermophilus} SCOP: c.56.2.1 PDB: 1odj_A* 1odi_A 1odl_A
Probab=99.51 E-value=4.1e-14 Score=98.49 Aligned_cols=61 Identities=11% Similarity=0.133 Sum_probs=46.6
Q ss_pred HHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCc-cHHHHHHHHHHHH
Q 034733 3 SQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKP-TAEEFMQNLVAVT 63 (85)
Q Consensus 3 ~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~-~~~~f~~~~~~~s 63 (85)
+.+.+++++++++++|||++|++++|+.+|+||++||+|||++++... +.+++.+...+..
T Consensus 164 ~~~~~~~~~~g~~~veME~aa~~~~a~~~gip~~~ir~IsD~~~~~~~~~~~~~~~~~~~~~ 225 (235)
T 1odk_A 164 PEEARAWARYGVLAFEMEASALFLLGRMRGVRTGAILAVSNRIGDPELAPPEVLQEGVRRMV 225 (235)
T ss_dssp HHHHHHHHTTTEEEEESSHHHHHHHHHHHTCEEEEEEEEEEEC------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEeccHHHHHHHHHHcCCCEEEEEEEecCcccCccCCHHHHHHHHHHHH
Confidence 456677788899999999999999999999999999999999987543 4556655444443
No 15
>1je0_A MTAP;, 5'-methylthioadenosine phosphorylase; alpha-beta protein, transferase; 1.60A {Sulfolobus solfataricus} SCOP: c.56.2.1 PDB: 1jdt_A* 1jdu_A 1jdv_A* 1jdz_A* 1jds_A 1je1_A* 1jp7_A 1jpv_A
Probab=99.51 E-value=2.1e-14 Score=99.88 Aligned_cols=59 Identities=15% Similarity=0.085 Sum_probs=45.7
Q ss_pred HHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC-CCc-cHHHHHHHHHH
Q 034733 3 SQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG-DKP-TAEEFMQNLVA 61 (85)
Q Consensus 3 ~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~-~~~-~~~~f~~~~~~ 61 (85)
+++.+++++++++++|||+++++++|+.+|+||++||+|||++++ ... ++++|.+...+
T Consensus 165 ~~~~~~~~~~g~~~veME~aa~~~~a~~~gi~~~~ir~IsD~~~~~~~~~~~~~~~~~~~~ 225 (236)
T 1je0_A 165 EEFVKKWSSRGNIAVEMECATLFTLSKVKGWKSATVLVVSDNLAKGGIWITKEELEKSVMD 225 (236)
T ss_dssp TTHHHHHHTTTEEEEESSHHHHHHHHHHHTCEEEEEEEEEEECC--------CHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEeccHHHHHHHHHHcCCcEEEEEEEEcccccCCccCCHHHHHHHHHH
Confidence 356677788899999999999999999999999999999999987 443 56676554443
No 16
>3ozb_A Methylthioadenosine phosphorylase; 5'-methylthioinosine,phosphorylase, transferase; HET: HPA; 2.80A {Pseudomonas aeruginosa}
Probab=99.50 E-value=8.4e-14 Score=99.97 Aligned_cols=73 Identities=18% Similarity=0.227 Sum_probs=63.6
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC--CCc-cHHHHHHHHHHHHHHHHHHHHHHH
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG--DKP-TAEEFMQNLVAVTAALEQSVSQVI 74 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~--~~~-~~~~f~~~~~~~s~~~~~~v~~~l 74 (85)
|+...+.++++++++|+||+++++++|..+|+||++||+|||++.+ +.+ +++++.+.+.+++..+.+++.++|
T Consensus 182 t~aE~~~~~~~GadaVgMe~~~ea~vA~~~gi~~~~I~~ISD~a~~~~~~~~s~eev~~~a~~~~~~~~~l~~~~i 257 (259)
T 3ozb_A 182 TVAEIARLERDGNDIVGMTGMPEAALARELDLPYACLALVVNPAAGKSAGIITMAEIEQALHDGIGKVREVLARVL 257 (259)
T ss_dssp CHHHHHHHHHTTCSEEESSSTTHHHHHHHTTCCEEEEEEEEEECTTTSSSCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCEEEcCcHHHHHHHHHHcCCCeEEEEEEEeCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555667788999999999999999999999999999999999976 344 899999999999888888877765
No 17
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=99.50 E-value=1.2e-13 Score=100.63 Aligned_cols=76 Identities=12% Similarity=0.153 Sum_probs=68.3
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC--CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG--DKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 77 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~--~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l 77 (85)
|+...+.++++++++|+||+++.+++|+.+|+||++||+|||++.+ +.+ +++++.+.+.+++..+.+++.++|+++
T Consensus 206 T~AE~~~~r~~GadaVgMe~~pea~vA~~~gi~~~~I~~VSD~a~g~~~~~~s~eev~~~a~~~~~~~~~ll~~~i~~~ 284 (287)
T 3odg_A 206 TPAEIRMMQIIGGDVVGMSVVPEVLSAAHCGLKVIALTAITNLAEGLSDVVLSHEQTLKFAKVASVNFTKLIEAFLKSK 284 (287)
T ss_dssp CHHHHHHHHHTTCSEEESSSHHHHHHHHHHTCEEEEEEEEEEECTTSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCEEEeCcHHHHHHHHHHcCCCEEEEEEEEccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667788999999999999999999999999999999999976 344 899999999999999999999999887
No 18
>1z34_A Purine nucleoside phosphorylase; alpha-beta-alpha sandwich, transferase; HET: 2FD; 2.40A {Trichomonas vaginalis} PDB: 1z33_A* 1z35_A* 1z36_A* 1z37_A* 1z38_A* 1z39_A* 2i4t_A* 2isc_A*
Probab=99.49 E-value=1.3e-13 Score=95.90 Aligned_cols=60 Identities=22% Similarity=0.193 Sum_probs=46.6
Q ss_pred HHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCc-cHHHHHHHHHHH
Q 034733 3 SQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKP-TAEEFMQNLVAV 62 (85)
Q Consensus 3 ~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~-~~~~f~~~~~~~ 62 (85)
+.+.+++++++++++|||+++++++|+.+|+||++||+|||++++... +.+++.+...+.
T Consensus 164 ~~~~~~~~~~g~~~veME~aa~~~~a~~~gi~~~~i~~IsD~~~~~~~~~~~~~~~~~~~~ 224 (235)
T 1z34_A 164 TELAQLMNKFHFLAVEMESAGLFPIADLYGARAGCICTVSDHILHHEETTAEERQNSFQNM 224 (235)
T ss_dssp THHHHHHHHTTCCEEESSHHHHHHHHHHTTCEEEEEEEEEEESSSCCC-----HHHHHHHH
T ss_pred HHHHHHHHHcCceEEechHHHHHHHHHHhCCcEEEEEEEEecCCCCccCCHHHHHHHHHHH
Confidence 456777888899999999999999999999999999999999987543 444554444443
No 19
>1vhw_A Purine nucleoside phosphorylase; structural genomics, transferase; HET: ADN; 1.54A {Vibrio cholerae} SCOP: c.56.2.1 PDB: 1vhj_A* 3of3_A* 3occ_A* 1pw7_A* 1pr1_A* 1pr2_A* 1pr4_A* 1pr5_A* 1pr0_A* 1pr6_A* 3onv_A 1pk7_A* 1k9s_A* 1pke_A* 1pk9_A 3ooe_A 3ooh_A 1ecp_A 1a69_A 1oty_A* ...
Probab=99.47 E-value=1.6e-13 Score=96.98 Aligned_cols=71 Identities=15% Similarity=0.099 Sum_probs=53.1
Q ss_pred HHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 034733 3 SQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 77 (85)
Q Consensus 3 ~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l 77 (85)
+++.+++++++++++|||+++++++|+.+|+||++||+|||++++... +.++..+...+.. +++++.+.++
T Consensus 167 ~~~~~~~~~~g~~~veME~aa~~~~a~~~gi~~~~I~~IsD~~~~~~~~~~~e~~~~~~~~~----~~ale~~~~~ 238 (253)
T 1vhw_A 167 PSMFDVMDKYGIVGVEMEAAGIYGVAAEYGAKALAICTVSDHIKTGEQTTSEERQNTFNEMI----EIALDSVLIG 238 (253)
T ss_dssp TTHHHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEEETTTCCCCCHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEechHHHHHHHHHHcCCCEEEEEEEEccCCCCccCCHHHHHHHHHHHH----HHHHHHHHhc
Confidence 356677888999999999999999999999999999999999986443 4555544444433 4444444444
No 20
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=99.47 E-value=2e-13 Score=98.46 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=67.2
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC--CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG--DKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 77 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~--~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l 77 (85)
|++..+.++.+++++|+||+++.+++|+.+|+||++||.|||++.+ +.+ +++++.+.+.+++.++.+++.++|+.+
T Consensus 190 T~aE~~~~~~~GadaVgMe~~~ea~lA~~~gi~~~~i~~VtD~a~g~~~~~~s~eev~~~~~~~~~~~~~lv~~~i~~~ 268 (268)
T 1g2o_A 190 TPAEIRMLQTLGADLVGMSTVHETIAARAAGAEVLGVSLVTNLAAGITGEPLSHAEVLAAGAASATRMGALLADVIARF 268 (268)
T ss_dssp CHHHHHHHHHHTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECTTSSCCCCCHHHHHHHHHTTHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHcCCeEEecCHHHHHHHHHHcCCCEEEEEEEecCccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4566777788999999999999999999999999999999999965 334 899999999999998899999988764
No 21
>3khs_A Purine nucleoside phosphorylase; alpha-beta structure, mixed beta-barrel, hydrolase; 2.38A {Grouper iridovirus} SCOP: c.56.2.0
Probab=99.46 E-value=2.1e-13 Score=99.18 Aligned_cols=81 Identities=17% Similarity=0.164 Sum_probs=63.1
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC----CCc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG----DKP-TAEEFMQNLVAVTAALEQSVSQVIDF 76 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~----~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~ 76 (85)
|+...+.++.+++++|+||+++.+++|+.+|+|+++|+.|||++.. +.+ +++++.+.+.+++.++.+++.++|+.
T Consensus 199 T~AE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~i~~VTd~a~g~~~~~~~~s~~ev~~~~~~~~~~~~~lv~~~i~~ 278 (285)
T 3khs_A 199 TPAECKILRLMGSDAVGMSTAPETIVAKHGGMRCLAVSLISNVIASNCETPAEPTHEEVLRAGEEASARMTALVKLVIEK 278 (285)
T ss_dssp CHHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCTTCC------------CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCcEEeccHHHHHHHHHHCCCCEEEEEEEeccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667888999999999999999999999999999999999963 334 79999999999999999999999999
Q ss_pred hhccCc
Q 034733 77 INGKRF 82 (85)
Q Consensus 77 l~~~~~ 82 (85)
|....|
T Consensus 279 l~~~~~ 284 (285)
T 3khs_A 279 IRGELP 284 (285)
T ss_dssp HHTCC-
T ss_pred hhhhcC
Confidence 987654
No 22
>1vmk_A Purine nucleoside phosphorylase; TM1596, structural genomics protein structure initiative, PSI, joint center for structu genomics; HET: GUN; 2.01A {Thermotoga maritima} SCOP: c.56.2.1
Probab=99.44 E-value=4.5e-13 Score=97.10 Aligned_cols=75 Identities=12% Similarity=0.203 Sum_probs=65.7
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCC--Cc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGD--KP-TAEEFMQNLVAVTAALEQSVSQVIDF 76 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~--~~-~~~~f~~~~~~~s~~~~~~v~~~l~~ 76 (85)
|++..+.++.+++++|+||+++.+++|..+|+||++|+.|||++.+. .+ +++++.+.+.+++..+.+++.++|+.
T Consensus 199 T~AE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~I~~ITD~a~g~~~~~~s~eev~~~~~~~~~~~~~lv~~~i~~ 276 (277)
T 1vmk_A 199 TPAEIRVFEKLGADLVGMSTVPEVIAAKHCGLKVVVFSCVTNMAAGITHGRLSHEEVVRTTKMAQGKIEKALTTAVEV 276 (277)
T ss_dssp CHHHHHHHHHTTCSEEESSSHHHHHHHHHHTCEEEEEEEEEEECTTC-----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCeEEecChHHHHHHHHHCCCCEEEEEEEecCccCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 45667777889999999999999999999999999999999999752 34 89999999999998888999888875
No 23
>3fuc_A Purine nucleoside phosphorylase; recombinant, glycosyltransferase, transferase, 9-deazaguanine, multisubstrate analogue inhibitors, nucleoside-binding; HET: 9D9 9DG; 1.45A {Bos taurus} SCOP: c.56.2.1 PDB: 1b8n_A* 1b8o_A* 2ai2_A* 1v48_A* 2ai1_A* 2ai3_A* 1lvu_A* 1lv8_A* 1a9o_A 1a9p_A* 1a9s_A* 1fxu_A* 2qpl_A* 1a9t_A* 3pnp_A 1pbn_A 4pnp_A 1a9q_A* 1a9r_A* 1vfn_A* ...
Probab=99.42 E-value=6.8e-13 Score=96.45 Aligned_cols=76 Identities=18% Similarity=0.101 Sum_probs=66.8
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCC----CCCc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVD----GDKP-TAEEFMQNLVAVTAALEQSVSQVIDF 76 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~----~~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~ 76 (85)
|+...+.++.+++++|+||+++.+++|+.+|+|+++|+.|||++. .+.+ +++++.+.+.+++..+.+++.++|+.
T Consensus 202 T~AE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~I~~VTd~a~~~~~~~~~~s~eev~~~~~~~~~~~~~l~~~~i~~ 281 (284)
T 3fuc_A 202 TVAECRLLRNLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESQGKANHEEVLEAGKQAAQKLEQFVSLLMAS 281 (284)
T ss_dssp CHHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHcCCcEEecCHHHHHHHHHHcCCCEEEEEEEecccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455567788899999999999999999999999999999999986 3444 89999999999999888888888877
Q ss_pred h
Q 034733 77 I 77 (85)
Q Consensus 77 l 77 (85)
|
T Consensus 282 l 282 (284)
T 3fuc_A 282 I 282 (284)
T ss_dssp S
T ss_pred c
Confidence 6
No 24
>3phb_E Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.30A {Homo sapiens}
Probab=99.41 E-value=8.9e-13 Score=97.55 Aligned_cols=78 Identities=18% Similarity=0.060 Sum_probs=69.0
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCC----CCCc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVD----GDKP-TAEEFMQNLVAVTAALEQSVSQVIDF 76 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~----~~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~ 76 (85)
|+...+.++.+++++|+||+++.+++|+.+|+||++|+.|||++. .+.+ +++++.+.+.+++..+.+++.++|+.
T Consensus 237 T~AE~r~~r~~GadaVgMet~pEa~vAr~~gi~~~~Is~VTD~a~~~~~~~~~vs~eevl~~a~~~~~~~~~Lv~~~i~~ 316 (324)
T 3phb_E 237 TVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVIMDYESLEKANHEEVLAAGKQAAQKLEQFVSILMAS 316 (324)
T ss_dssp CHHHHHHHHHHTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHcCCcEEecChHHHHHHHHHCCCCEEEEEEEecccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566788899999999999999999999999999999999986 3444 89999999999999999999999998
Q ss_pred hhc
Q 034733 77 ING 79 (85)
Q Consensus 77 l~~ 79 (85)
|..
T Consensus 317 l~~ 319 (324)
T 3phb_E 317 IPL 319 (324)
T ss_dssp SCC
T ss_pred hcc
Confidence 854
No 25
>3p0f_A Uridine phosphorylase 2; transferase; HET: BAU; 1.54A {Homo sapiens} PDB: 3p0e_A* 2xrf_A
Probab=99.41 E-value=5.8e-13 Score=97.04 Aligned_cols=66 Identities=14% Similarity=0.016 Sum_probs=53.9
Q ss_pred HHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC-CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 034733 9 ITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG-DKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 77 (85)
Q Consensus 9 ~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~-~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l 77 (85)
++++++.++|||+||++++|+.+|+|+++||+|||.... +.. ++++|.+.+.+.+ ++++.++|++.
T Consensus 228 ~~~~gv~avEMEsAAl~~va~~~gv~a~~i~~isdnr~~~~~~~~~~~~~~~~~~~~---~~lv~~~i~~~ 295 (297)
T 3p0f_A 228 AFKAGVRNIEMESTVFAAMCGLCGLKAAVVCVTLLDRLDCDQINLPHDVLVEYQQRP---QLLISNFIRRR 295 (297)
T ss_dssp HHHHTEEEEESSHHHHHHHHHHTTCEEEEEEEEEEETTTCSSCCCCHHHHHHHHTHH---HHHHHHHHHHH
T ss_pred HHHcCcEEEehHHHHHHHHHHHcCCcEEEEEEEEcCccCCCcccChHHHHHHHHHHH---HHHHHHHHHHh
Confidence 356799999999999999999999999999999998744 333 6788887766654 67788888753
No 26
>1tcv_A Purine-nucleoside phosphorylase; transferase; HET: NDS; 1.75A {Schistosoma mansoni} PDB: 1tcu_A* 1td1_A 3djf_A* 3e0q_A* 3e9r_A* 3e9z_A* 3f8w_A* 3faz_A* 3fb1_A* 3fnq_A* 3iex_A*
Probab=99.41 E-value=6.6e-13 Score=96.49 Aligned_cols=77 Identities=12% Similarity=0.091 Sum_probs=59.9
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC-C---Cc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG-D---KP-TAEEFMQNLVAVTAALEQSVSQVIDF 76 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~-~---~~-~~~~f~~~~~~~s~~~~~~v~~~l~~ 76 (85)
|+...+.++.+++++|+||+++.+++|+.+|+||++|+.|||++.. + .+ +++++.+.+.+++.++.+++.++|+.
T Consensus 204 T~aE~~~~r~~Gad~VgMe~~~ea~vA~~~gi~~~~i~~Vtd~a~~~~~~~~~~~~eev~~~~~~~~~~~~~lv~~~i~~ 283 (287)
T 1tcv_A 204 TPAECTMLLNMGCDVVGMSTIPEVVIARHCGIQVFAVSLVTNISVLDVESDLKPNHEEVLATGAQRAELMQSWFEKIIEK 283 (287)
T ss_dssp CHHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCTTCC-----------CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCcEEcccHHHHHHHHHHCCCCEEEEEEeeccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556677788999999999999999999999999999999999973 3 44 79999999999999999999999988
Q ss_pred hh
Q 034733 77 IN 78 (85)
Q Consensus 77 l~ 78 (85)
|.
T Consensus 284 l~ 285 (287)
T 1tcv_A 284 LP 285 (287)
T ss_dssp SC
T ss_pred hc
Confidence 74
No 27
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A
Probab=99.40 E-value=1e-12 Score=94.56 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=64.3
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC--CCc-cHHHHHHHHHHHHHHHHHHHHHHHH
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG--DKP-TAEEFMQNLVAVTAALEQSVSQVID 75 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~--~~~-~~~~f~~~~~~~s~~~~~~v~~~l~ 75 (85)
|++..+.++.+++++|+||+++.+++|+.+|+||++|+.|||++.+ +.+ +++++.+.+.+++..+.+++.++|+
T Consensus 189 T~aE~~~~r~~Gad~VgMe~~pea~lAr~~gi~~~~i~~Vtd~a~g~~~~~~s~eev~~~~~~~~~~~~~ll~~~i~ 265 (266)
T 1qe5_A 189 TPAEVRMAGILGADLVGMSTTLEAIAARHCGLEVLGVSLVTNLAAGISPTPLSHAEVIEAGQAAGPRISALLADIAK 265 (266)
T ss_dssp CHHHHHHHHHHTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECTTTCSSCCCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCeEEecChHHHHHHHHHCCCCEEEEEEEecCccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566777788999999999999999999999999999999999965 334 8999999999998888888777764
No 28
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A*
Probab=99.40 E-value=5.7e-13 Score=97.88 Aligned_cols=76 Identities=13% Similarity=0.135 Sum_probs=61.6
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC-CCc-cHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG-DKP-TAEEFMQNLVAVTAALEQSVSQVIDFI 77 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~-~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l 77 (85)
|+...+.++.+++++|+||+++.+++|+.+++||++||.|||++.. +.+ +++++.+.+.+++..+.+++.++|+.|
T Consensus 226 T~AE~r~~r~~GadaVgMst~pEa~vAre~gi~~~~Is~ITD~a~g~~~~vs~eevl~~a~~~~~~~~~ll~~~i~~~ 303 (303)
T 3la8_A 226 TPAEIRAFKTLGADAVGMSTVPEVIVAVHSGLKVLGISAITNYAAGFQSELNHEEVVAVTQQIKEDFKGLVKAILVEL 303 (303)
T ss_dssp CHHHHHHHHHTTCSEEESSSHHHHHHHHHTTCEEEEEEEEEEECTTC---------CCHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHcCCCEEeccHHHHHHHHHHcCCCEEEEEEEeecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5566677888999999999999999999999999999999999975 444 899999999999999999999888764
No 29
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=99.39 E-value=1.4e-12 Score=98.02 Aligned_cols=78 Identities=9% Similarity=0.045 Sum_probs=69.4
Q ss_pred CHHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCC-C---Cc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034733 2 SSQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDG-D---KP-TAEEFMQNLVAVTAALEQSVSQVIDF 76 (85)
Q Consensus 2 ~~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~-~---~~-~~~~f~~~~~~~s~~~~~~v~~~l~~ 76 (85)
|++..+.++.+++++|+||+++.+++|..+|+||++|+.|||++.. + .+ +++++.+.+.+++.++.+++.++|+.
T Consensus 287 T~AE~r~lr~~GadaVgMetapEa~lAre~Gi~~~~I~~VTD~a~~~~~~~~~vs~eEvle~~~~~~~~~~~Lv~~~I~~ 366 (373)
T 2p4s_A 287 TVAEVKMLSMLGVDAIGMSTVHEIITARHCGMTCFAFSLITNMCTMSYEEEEEHCHDSIVGVGKNREKTLGEFVSRIVKH 366 (373)
T ss_dssp CHHHHHHHHHTTCCEEESSSHHHHHHHHHTTCEEEEEEEEEEECCCCSSSCCCCCHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCeEEecChHHHHHHHHHcCCCEEEEEEeecccccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566677788999999999999999999999999999999999874 2 34 89999999999999999999999998
Q ss_pred hhc
Q 034733 77 ING 79 (85)
Q Consensus 77 l~~ 79 (85)
|..
T Consensus 367 l~~ 369 (373)
T 2p4s_A 367 IHY 369 (373)
T ss_dssp HHH
T ss_pred hhh
Confidence 854
No 30
>1ybf_A AMP nucleosidase; structural genomics, protein structure initiative, PSI, NEW research center for structural genomics, nysgxrc; 2.90A {Bacteroides thetaiotaomicron} SCOP: c.56.2.1
Probab=99.36 E-value=1.2e-12 Score=93.42 Aligned_cols=46 Identities=20% Similarity=0.074 Sum_probs=40.9
Q ss_pred HHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCC
Q 034733 4 QDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDK 49 (85)
Q Consensus 4 ~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~ 49 (85)
+..+.+++.++++||||+||++++|+.+|+||++||+|||+++...
T Consensus 171 e~~~~l~~~g~~~veMEsaal~~~a~~~gv~~~~i~~VsD~~~~~~ 216 (268)
T 1ybf_A 171 KFKDYLRSTHASGVDMETATLMTVGFANKIPMGALLLISDRPMFPE 216 (268)
T ss_dssp HHHHHHHHTTCSEEESSHHHHHHHHHHTTCCEEEEEEECSCSSCCS
T ss_pred HHHHHHHHcCCeEEecCHHHHHHHHHHcCCCEEEEEEEEcCCCCcc
Confidence 4456677789999999999999999999999999999999987654
No 31
>1t8s_A AMP nucleosidase; alpha-beta-alpha sandwich, alpha-beta fold, hydrolase; HET: FMP; 2.60A {Escherichia coli} SCOP: c.56.2.1 PDB: 1t8r_A* 1t8w_A 1t8y_A 2guw_A
Probab=99.35 E-value=1.9e-12 Score=99.96 Aligned_cols=72 Identities=22% Similarity=0.186 Sum_probs=51.4
Q ss_pred HHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCCc----cHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 034733 4 QDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDKP----TAEEFMQNLVAVTAALEQSVSQVIDFIN 78 (85)
Q Consensus 4 ~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~~----~~~~f~~~~~~~s~~~~~~v~~~l~~l~ 78 (85)
+..+.++..+++++|||+||++++|+.+|+||++||+|||+++.... ++.+|. ..+..+..+++++.++.|.
T Consensus 389 ~~~~~~~~~GalaVEMEsAAla~vA~~~gvp~l~Ir~VSD~a~~~e~~~~~~~~~~~---~~a~~~ai~iaLeai~~L~ 464 (484)
T 1t8s_A 389 ASALRFNLSRAVAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFY---EGAISEHLQIGIRAIDLLR 464 (484)
T ss_dssp HHHHHHHHHTEEEEESSHHHHHHHHHHTTCCEEEEEEEEECTTSSCCC-------------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEeccHHHHHHHHHHcCCCEEEEEEEEecCCcccccccccHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 33445556699999999999999999999999999999999986442 344443 3344555677777777764
No 32
>3uaw_A PNP, purine nucleoside phosphorylase DEOD-type; necleoside phosphorylase I (NP-I) family, transferase; HET: ADN GOL; 1.20A {Bacillus cereus} PDB: 2ac7_A 3uav_A* 3uax_A* 1xe3_A 3uay_A* 3uaz_A* 4d8y_A 4d8x_A 4d8v_A 4d98_A 4d9h_A* 4da0_A* 4da6_A* 4da7_A* 4da8_A* 4dab_A* 4dae_A* 4dan_A* 4dao_A* 4dar_A*
Probab=99.35 E-value=1.6e-12 Score=91.06 Aligned_cols=46 Identities=20% Similarity=0.142 Sum_probs=40.7
Q ss_pred HHHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCC
Q 034733 3 SQDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGD 48 (85)
Q Consensus 3 ~~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~ 48 (85)
+++.+.+++++++++|||++|++++|+.+|+||++||+|||.+..+
T Consensus 164 ~~~~~~~~~~g~~~veME~aa~~~va~~~gi~~~~i~~ISD~~~~~ 209 (235)
T 3uaw_A 164 MDMVKKLGDYGVLAVEMETTALYTLAAKYGVNALSVLTVSDHIFTG 209 (235)
T ss_dssp CHHHHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEEETTTC
T ss_pred HHHHHHHHHcCCcEEEccHHHHHHHHHHcCCCEEEEEEEecccCCC
Confidence 3456667888999999999999999999999999999999997543
No 33
>3euf_A Uridine phosphorylase 1; nucleoside phosphorylase, uridine rescue, 5- benzylacyclouridine, alternative splicing, glycosyltransferase, transferase; HET: BAU; 1.90A {Homo sapiens} PDB: 3eue_A* 3nbq_A 3ku4_A 3kuk_A* 3kvr_A 3kvy_A
Probab=99.34 E-value=3.7e-12 Score=94.13 Aligned_cols=67 Identities=16% Similarity=0.086 Sum_probs=52.7
Q ss_pred HHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCC-CCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 034733 9 ITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLV-DGDKP-TAEEFMQNLVAVTAALEQSVSQVIDFIN 78 (85)
Q Consensus 9 ~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a-~~~~~-~~~~f~~~~~~~s~~~~~~v~~~l~~l~ 78 (85)
++++++.++|||+||++++|+.+|+||++||+|||.. +++.. .+.+++..+.+ +..+++.++|+.+-
T Consensus 257 ~~~~gv~avEMEsAAla~va~~~gv~a~~I~~isdnr~~ge~~~~~~e~l~~~~~---~~~~~v~~~ik~~l 325 (328)
T 3euf_A 257 AYAAGVRNIEMESSVFAAMCSACGLQAAVVCVTLLNRLEGDQISSPRNVLSEYQQ---RPQRLVSYFIKKKL 325 (328)
T ss_dssp HHHTTEEEEESSHHHHHHHHHHTTCEEEEEEEEEEETTSCSSCCSCHHHHHHHHT---HHHHHHHHHHHHHT
T ss_pred HHHcCCEEEehHHHHHHHHHHHcCCcEEEEEEEEccccCCccCCCcHHHHHHHHH---HHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999976 44433 45666654444 45788888888764
No 34
>3u40_A Pnpase, purine nucleoside phosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: ADN; 2.05A {Entamoeba histolytica} SCOP: c.56.2.0 PDB: 3tl6_A*
Probab=99.16 E-value=3.1e-11 Score=85.10 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=37.6
Q ss_pred HHHHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeec-CC
Q 034733 4 QDETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTD-LV 45 (85)
Q Consensus 4 ~~~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD-~a 45 (85)
++.+.+++++++++|||++|++++|+.+|+||++||+||| ..
T Consensus 173 ~~~~~~~~~g~~~veMEsaal~~va~~~gi~~~~i~~ISD~~~ 215 (242)
T 3u40_A 173 DHSGAWKKMGVLAVEMEAAALYMIAARARKQALCMLTISDLCY 215 (242)
T ss_dssp CCCHHHHHTTCCEEESSHHHHHHHHHHHTCEEEEEEEEEEESS
T ss_pred HHHHHHHHcCCcEEEchHHHHHHHHHHcCCCEEEEEEEEcCcc
Confidence 3445677889999999999999999999999999999999 64
No 35
>3ddo_A Urdpase, upase, uridine phosphorylase; transferase, cytoplasm, glycosyltransferase; 1.50A {Salmonella typhimurium} SCOP: c.56.2.1 PDB: 1ryz_A 1sj9_A* 1y1q_A* 1y1s_A 1y1r_A 1zl2_A* 2hn9_A 1y1t_A* 2hsw_A 2hwu_A* 2pga_A* 2hrd_A 3dps_A 3fwp_A* 3nsr_A* 3c74_A* 2qdk_A 2iq5_A 2oec_A* 2i8a_A ...
Probab=99.14 E-value=7e-12 Score=88.82 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=33.3
Q ss_pred HHHHHHHhcCCcEEeccHHHHHHHHHhcCCC------eEEEEeeecCCCCCC
Q 034733 4 QDETSITANDATIKDMEGAAVAYVADLFKVP------AIFVKAVTDLVDGDK 49 (85)
Q Consensus 4 ~~~~~~~~~~a~~vDME~aAiA~vc~~~~vP------f~~iR~ISD~a~~~~ 49 (85)
++.+.++++++++||||++|++++|+.+|+| |+++|.+||.++++.
T Consensus 182 ~~~~~~~~~ga~aveME~aa~a~va~~~gi~~~~i~~v~~~R~~sd~~~~~~ 233 (253)
T 3ddo_A 182 GSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAGVIVNRTQQEIPNAET 233 (253)
T ss_dssp THHHHHHHTTCCEEESSHHHHHHHHHTTTCEEEEEEEECCCTTC--------
T ss_pred HHHHHHHHCCceEEeccHHHHHHHHHHcCCcEEEEEEEEEeccccccCChhH
Confidence 4456677889999999999999999999999 777777888776554
No 36
>3mb8_A Purine nucleoside phosphorylase; PNP, immucillin H, IMMH, TR; HET: IMH; 1.90A {Toxoplasma gondii}
Probab=99.05 E-value=1.5e-10 Score=83.66 Aligned_cols=40 Identities=15% Similarity=-0.064 Sum_probs=36.4
Q ss_pred HHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCC
Q 034733 6 ETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVD 46 (85)
Q Consensus 6 ~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~ 46 (85)
.+.+++++++ ||||++|++++|+.+|+||++||+|||...
T Consensus 175 ~~~~~~~Ga~-VEMEsaala~vA~~~gv~~~~I~~VSd~~~ 214 (279)
T 3mb8_A 175 LEMYSKCCDV-IDMEMSGVLGLCQARGIATCGILAVDGSPL 214 (279)
T ss_dssp HHHHHTTCSE-EESSHHHHHHHHHHTTCEEEEEEEECBCGG
T ss_pred HHHHHHcCCE-EecCHHHHHHHHHHcCCCEEEEEEEECCcc
Confidence 4567788999 999999999999999999999999999864
No 37
>3phc_A Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.00A {Plasmodium falciparum} PDB: 1q1g_A* 1nw4_A* 3fow_A*
Probab=99.02 E-value=1.2e-10 Score=83.91 Aligned_cols=41 Identities=20% Similarity=0.089 Sum_probs=36.9
Q ss_pred HHHHHhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCC
Q 034733 6 ETSITANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVD 46 (85)
Q Consensus 6 ~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~ 46 (85)
.+.++++++++||||++|++++|+.+|+||++||+|+|...
T Consensus 171 ~~~~~~~Ga~aVEMEsaal~~vA~~~gi~~~~I~~V~~~~~ 211 (275)
T 3phc_A 171 LEDYSKANAAVVEMELATLMVIGTLRKVKTGGILIVDGCPF 211 (275)
T ss_dssp HHHHHHTTCCEEESSHHHHHHHHHHTTCEEEEEEEEEECGG
T ss_pred HHHHHHcCCEEEECcHHHHHHHHHHcCCCEEEEEEEECCcc
Confidence 35677889999999999999999999999999999988753
No 38
>3qpb_A Uridine phosphorylase; hexamer, NP-I superfamily, pyrimidine salvage pathway, uridi phosphorylase, transition state; HET: R1P; 1.82A {Streptococcus pyogenes serotype M6}
Probab=98.84 E-value=3.5e-10 Score=81.66 Aligned_cols=43 Identities=16% Similarity=0.020 Sum_probs=37.2
Q ss_pred HHHHHhcCCcEEeccHHHHHHHHHhcCCCeEE-EEeeecCCCCC
Q 034733 6 ETSITANDATIKDMEGAAVAYVADLFKVPAIF-VKAVTDLVDGD 48 (85)
Q Consensus 6 ~~~~~~~~a~~vDME~aAiA~vc~~~~vPf~~-iR~ISD~a~~~ 48 (85)
.+.++++++++||||++|++++|+.+|+|+++ +++|||.+++.
T Consensus 207 ~~~~~~~Ga~aVEMEsaala~vA~~~gi~~~~il~visn~~~~~ 250 (282)
T 3qpb_A 207 WEAWKRLGTKASEMESAALFVAASHLGVRCGSDFLVVGNQERNA 250 (282)
T ss_dssp HHHHHHTTCCEECSSHHHHHHHHHHHTCEEEEEEEEEEEHHHHH
T ss_pred HHHHHHcCCeEEeccHHHHHHHHHHcCCCEEEEEEEEEcccccc
Confidence 34456779999999999999999999999988 89999987543
No 39
>3bje_A Nucleoside phosphorylase, putative; uridine phosphorylase, structural medical structural genomics of pathogenic protozoa consorti MSGPP; HET: R1P; 1.44A {Trypanosoma brucei}
Probab=98.83 E-value=6.5e-09 Score=77.27 Aligned_cols=40 Identities=25% Similarity=0.264 Sum_probs=36.3
Q ss_pred HhcCCcEEeccHHHHHHHHHhcCCCeEEEEeeecCCCCCC
Q 034733 10 TANDATIKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGDK 49 (85)
Q Consensus 10 ~~~~a~~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~ 49 (85)
+++++.++|||++|++++|+.+|+|+++||+|||......
T Consensus 284 ~~~gv~~vEMEsaal~~la~~~g~~a~~i~~Vsdn~~~~~ 323 (349)
T 3bje_A 284 GVEVVTNIEMETSAICYLSDMLGYQAGAACVVVSKRVGEK 323 (349)
T ss_dssp EEECEEEEESSHHHHHHHHHHHTCEEEEEEEEEEESSTTC
T ss_pred hhcCcEEEECcHHHHHHHHHHcCCCEEEEEEEEccCCCCc
Confidence 3568999999999999999999999999999999987554
No 40
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=73.35 E-value=2 Score=28.97 Aligned_cols=24 Identities=17% Similarity=0.257 Sum_probs=19.9
Q ss_pred cEEeccHHHHHHHHHhcCCCeEEE
Q 034733 15 TIKDMEGAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 15 ~~vDME~aAiA~vc~~~~vPf~~i 38 (85)
.+--.=++.+|..|+.+++||+++
T Consensus 68 v~nkiGT~~~Al~Ak~~~vPf~V~ 91 (191)
T 1w2w_B 68 TANKIGTLQLAVICKQFGIKFFVV 91 (191)
T ss_dssp EEEETTHHHHHHHHHHHTCEEEEE
T ss_pred EEecccHHHHHHHHHHcCCCEEEe
Confidence 344556789999999999999996
No 41
>3o3m_B Beta subunit 2-hydroxyacyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_B* 3o3o_B
Probab=67.82 E-value=27 Score=25.38 Aligned_cols=40 Identities=13% Similarity=0.172 Sum_probs=30.8
Q ss_pred HHHhcCCcEE-----------eccHHHHHHHHHhcCCCeEEEEeeecCCCCCC
Q 034733 8 SITANDATIK-----------DMEGAAVAYVADLFKVPAIFVKAVTDLVDGDK 49 (85)
Q Consensus 8 ~~~~~~a~~v-----------DME~aAiA~vc~~~~vPf~~iR~ISD~a~~~~ 49 (85)
+++++++++| .+|..-+-+.+...|+|++.|- .|+.+++.
T Consensus 308 ~~~~~~~DGvI~~~~~~C~~~~~~~~~~~~~~~~~giP~l~ie--~D~~~~~~ 358 (385)
T 3o3m_B 308 EVKKKDIDGVIFCMMKFCDPEEYDYPLVRKDIEDSGIPTLYVE--IDQQTQNN 358 (385)
T ss_dssp HHHHTTCCEEEEEEETTCHHHHHHHHHHHHHHHTTTCCEEEEE--ECTTCSCC
T ss_pred HHHhCCCCEEEEeccCCCCccHhhHHHHHHHHHHCCCCEEEEE--ecCCCCCh
Confidence 4456665555 5788899999999999999996 78887643
No 42
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=63.86 E-value=5.2 Score=29.40 Aligned_cols=21 Identities=19% Similarity=0.254 Sum_probs=18.7
Q ss_pred eccHHHHHHHHHhcCCCeEEE
Q 034733 18 DMEGAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 18 DME~aAiA~vc~~~~vPf~~i 38 (85)
-.=++.+|..|+.+|+||+++
T Consensus 244 KiGT~~lAl~Ak~~~vPfyV~ 264 (351)
T 1t5o_A 244 KIGTYTVSVVAKHHNIPFYVA 264 (351)
T ss_dssp ETTHHHHHHHHHHTTCCEEEE
T ss_pred ccCHHHHHHHHHHcCCCEEEe
Confidence 356789999999999999997
No 43
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=63.53 E-value=5.3 Score=29.30 Aligned_cols=21 Identities=14% Similarity=0.180 Sum_probs=18.3
Q ss_pred eccHHHHHHHHHhcCCCeEEE
Q 034733 18 DMEGAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 18 DME~aAiA~vc~~~~vPf~~i 38 (85)
-.=++.+|..|+.+|+||+++
T Consensus 247 KiGT~~lAl~Ak~~~vPfyV~ 267 (347)
T 1t9k_A 247 KIGTYSLAVLAKRNNIPFYVA 267 (347)
T ss_dssp ETTHHHHHHHHHHTTCCEEEE
T ss_pred cccHHHHHHHHHHcCCCEEEe
Confidence 445689999999999999997
No 44
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=62.92 E-value=4.9 Score=29.29 Aligned_cols=21 Identities=19% Similarity=0.210 Sum_probs=18.2
Q ss_pred eccHHHHHHHHHhcCCCeEEE
Q 034733 18 DMEGAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 18 DME~aAiA~vc~~~~vPf~~i 38 (85)
-.=++.+|..|+.+|+||+++
T Consensus 229 KiGT~~lAl~Ak~~~vPfyV~ 249 (338)
T 3a11_A 229 KIGTALIALTAKEHRVWTMIA 249 (338)
T ss_dssp ETTHHHHHHHHHHTTCEEEEE
T ss_pred cccHHHHHHHHHHcCCCEEEe
Confidence 344688999999999999997
No 45
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=62.17 E-value=5.8 Score=29.46 Aligned_cols=22 Identities=18% Similarity=0.395 Sum_probs=18.7
Q ss_pred EeccHHHHHHHHHhcCCCeEEE
Q 034733 17 KDMEGAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 17 vDME~aAiA~vc~~~~vPf~~i 38 (85)
--.=++.+|..|+.+|+||+++
T Consensus 271 NKiGTy~lAl~Ak~~~vPfyV~ 292 (374)
T 2yvk_A 271 NKIGTYGLAILANAFDIPFFVA 292 (374)
T ss_dssp EETTHHHHHHHHHHTTCCEEEE
T ss_pred ecccHHHHHHHHHHcCCCEEEe
Confidence 3445789999999999999996
No 46
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=61.10 E-value=6.2 Score=29.39 Aligned_cols=21 Identities=14% Similarity=0.089 Sum_probs=18.4
Q ss_pred eccHHHHHHHHHhcCCCeEEE
Q 034733 18 DMEGAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 18 DME~aAiA~vc~~~~vPf~~i 38 (85)
-.=++.+|..|+.+||||+|+
T Consensus 276 KiGTy~lAl~Ak~~~vPfyV~ 296 (383)
T 2a0u_A 276 KIGTYNLAVSAKFHGVKLYVA 296 (383)
T ss_dssp ETTHHHHHHHHHHTTCCEEEE
T ss_pred cccHHHHHHHHHHcCCCEEEe
Confidence 445789999999999999997
No 47
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=60.97 E-value=6.4 Score=28.55 Aligned_cols=28 Identities=18% Similarity=0.158 Sum_probs=21.5
Q ss_pred CcEEeccHHHHHHHHHhcCCCeEEEEee
Q 034733 14 ATIKDMEGAAVAYVADLFKVPAIFVKAV 41 (85)
Q Consensus 14 a~~vDME~aAiA~vc~~~~vPf~~iR~I 41 (85)
..+--.-++.+|..|..+|+||+++=-.
T Consensus 205 ~v~nkiGT~~iAl~Ak~~~vP~~V~a~~ 232 (315)
T 3ecs_A 205 GIINKIGTNQMAVCAKAQNKPFYVVAES 232 (315)
T ss_dssp CEEEETTHHHHHHHHHHTTCCEEEECCG
T ss_pred CeeehhhhHHHHHHHHHhCCCEEEEecc
Confidence 3344455789999999999999998433
No 48
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=54.35 E-value=15 Score=25.83 Aligned_cols=22 Identities=9% Similarity=0.034 Sum_probs=19.2
Q ss_pred EeccHHHHHHHHHhcCCCeEEE
Q 034733 17 KDMEGAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 17 vDME~aAiA~vc~~~~vPf~~i 38 (85)
--..++.+|..|..+++||+++
T Consensus 196 nkiGt~~iA~~A~~~~vp~~V~ 217 (276)
T 1vb5_A 196 NKAGTYLLALACHENAIPFYVA 217 (276)
T ss_dssp EETTHHHHHHHHHHTTCCEEEE
T ss_pred echhHHHHHHHHHHcCCCEEEe
Confidence 3466799999999999999996
No 49
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=43.20 E-value=17 Score=27.18 Aligned_cols=21 Identities=24% Similarity=0.311 Sum_probs=17.5
Q ss_pred HHHHHHHHhcCCCeEEEEeee
Q 034733 22 AAVAYVADLFKVPAIFVKAVT 42 (85)
Q Consensus 22 aAiA~vc~~~~vPf~~iR~IS 42 (85)
.+||+.|.++++|+++|=+-.
T Consensus 309 ~gVa~~A~~~~vPviaiaG~~ 329 (383)
T 3cwc_A 309 IGVANIAKRYNKPVIGIAGSL 329 (383)
T ss_dssp HHHHHHHHHTTCCEEEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEeCCC
Confidence 679999999999999885533
No 50
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=39.16 E-value=24 Score=24.69 Aligned_cols=18 Identities=28% Similarity=0.536 Sum_probs=15.7
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 86 g~alA~~a~~~G~~~~iv 103 (323)
T 1v71_A 86 AQAIALSAKILGIPAKII 103 (323)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 458999999999998875
No 51
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=38.93 E-value=21 Score=24.97 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=15.9
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|+.++
T Consensus 84 g~alA~~a~~~G~~~~iv 101 (325)
T 1j0a_A 84 AFVTGLAAKKLGLDAILV 101 (325)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCcEEEE
Confidence 479999999999998874
No 52
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=38.29 E-value=24 Score=25.09 Aligned_cols=18 Identities=44% Similarity=0.700 Sum_probs=16.0
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 88 g~a~A~aa~~~G~~~~iv 105 (346)
T 3l6b_A 88 GQALTYAAKLEGIPAYIV 105 (346)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCCEEEE
Confidence 578999999999998875
No 53
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=38.00 E-value=16 Score=27.55 Aligned_cols=26 Identities=15% Similarity=0.324 Sum_probs=19.3
Q ss_pred EEeccHHHHHHHHHhcCCCeEEEEeeecCCCCC
Q 034733 16 IKDMEGAAVAYVADLFKVPAIFVKAVTDLVDGD 48 (85)
Q Consensus 16 ~vDME~aAiA~vc~~~~vPf~~iR~ISD~a~~~ 48 (85)
+-|++ +|+.+|+++|+|+++ |.|-+.
T Consensus 214 ~ddl~--~Ia~ia~~~gi~l~V-----D~A~G~ 239 (450)
T 3bc8_A 214 PDRLE--ELAVICANYDIPHVV-----NNAYGL 239 (450)
T ss_dssp CCCHH--HHHHHHHHHTCCEEE-----ECTTTT
T ss_pred ecCHH--HHHHHHHHCCCeEEE-----ECCCch
Confidence 34554 688999999999976 666543
No 54
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=37.84 E-value=16 Score=28.30 Aligned_cols=23 Identities=17% Similarity=0.274 Sum_probs=17.9
Q ss_pred HHHHHHHHHhcCCCeEEEEeeecCCCCC
Q 034733 21 GAAVAYVADLFKVPAIFVKAVTDLVDGD 48 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~iR~ISD~a~~~ 48 (85)
--+|+.+|+++|+|+++ |.|-+.
T Consensus 235 I~eIaeIch~~gIpllV-----DeAhGa 257 (501)
T 3hl2_A 235 LEELAVICANYDIPHIV-----NNAYGV 257 (501)
T ss_dssp HHHHHHHHHHHTCCEEE-----ECTTCT
T ss_pred HHHHHHHHHHcCCeEEE-----eCcchh
Confidence 34789999999999986 666443
No 55
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=36.87 E-value=23 Score=24.64 Aligned_cols=18 Identities=44% Similarity=0.674 Sum_probs=16.0
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 66 g~alA~~a~~~G~~~~i~ 83 (318)
T 2rkb_A 66 GIAAAYAARKLGIPATIV 83 (318)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 568999999999998875
No 56
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=36.69 E-value=20 Score=25.59 Aligned_cols=18 Identities=17% Similarity=0.386 Sum_probs=16.3
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|+.++
T Consensus 99 g~alA~~aa~~G~~~~Iv 116 (344)
T 3vc3_A 99 GISMAFMAAMKGYKMVLT 116 (344)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 689999999999998875
No 57
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=35.98 E-value=24 Score=24.38 Aligned_cols=18 Identities=39% Similarity=0.593 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 77 g~alA~~a~~~G~~~~iv 94 (311)
T 1ve5_A 77 AQGVAYAAQVLGVKALVV 94 (311)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 468999999999998875
No 58
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=35.94 E-value=21 Score=24.91 Aligned_cols=18 Identities=22% Similarity=0.281 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 79 g~alA~aa~~~G~~~~iv 96 (322)
T 1z7w_A 79 GVGLAFTAAAKGYKLIIT 96 (322)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 479999999999998874
No 59
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=35.85 E-value=22 Score=24.62 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 74 g~a~A~~a~~~G~~~~i~ 91 (304)
T 1ve1_A 74 GIGLAMIAASRGYRLILT 91 (304)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 469999999999998875
No 60
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=35.58 E-value=25 Score=24.44 Aligned_cols=18 Identities=33% Similarity=0.355 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 74 g~a~A~~a~~~G~~~~iv 91 (316)
T 1y7l_A 74 GIALAYVAAARGYKITLT 91 (316)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 479999999999998875
No 61
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=35.52 E-value=25 Score=24.37 Aligned_cols=18 Identities=22% Similarity=0.254 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 77 g~a~A~aa~~~G~~~~iv 94 (303)
T 1o58_A 77 GIAIAMIGAKRGHRVILT 94 (303)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 479999999999998875
No 62
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=35.30 E-value=22 Score=24.59 Aligned_cols=18 Identities=33% Similarity=0.360 Sum_probs=15.7
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 77 g~a~A~~a~~~G~~~~iv 94 (308)
T 2egu_A 77 GIGLAMVAAAKGYKAVLV 94 (308)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 368999999999998875
No 63
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=34.86 E-value=23 Score=24.60 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 79 g~alA~~a~~~G~~~~iv 96 (313)
T 2q3b_A 79 GIALAMVCAARGYRCVLT 96 (313)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 368999999999998875
No 64
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=34.71 E-value=23 Score=24.97 Aligned_cols=18 Identities=33% Similarity=0.300 Sum_probs=16.3
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 85 g~alA~aa~~~G~~~~iv 102 (325)
T 3dwg_A 85 GISLAMAARLKGYRLICV 102 (325)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 579999999999999876
No 65
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=34.21 E-value=27 Score=24.82 Aligned_cols=18 Identities=17% Similarity=0.246 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 90 g~alA~aa~~~G~~~~iv 107 (343)
T 2pqm_A 90 GIALCQAGAVFGYRVNIA 107 (343)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 369999999999998875
No 66
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=33.98 E-value=24 Score=24.45 Aligned_cols=18 Identities=28% Similarity=0.298 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 73 g~a~A~~a~~~G~~~~iv 90 (303)
T 2v03_A 73 GIALAMIAALKGYRMKLL 90 (303)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 479999999999998875
No 67
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=33.90 E-value=24 Score=25.01 Aligned_cols=18 Identities=17% Similarity=0.080 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|+.++
T Consensus 95 g~alA~aa~~~G~~~~iv 112 (342)
T 4d9b_A 95 VRQTAAVAAKLGLHCVAL 112 (342)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHhCCcEEEE
Confidence 578999999999998765
No 68
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=33.73 E-value=24 Score=24.98 Aligned_cols=19 Identities=16% Similarity=0.217 Sum_probs=16.7
Q ss_pred HHHHHHHHHhcCCCeEEEE
Q 034733 21 GAAVAYVADLFKVPAIFVK 39 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~iR 39 (85)
+.|+|.+|...|+|++++=
T Consensus 84 g~alA~aa~~~G~~~~iv~ 102 (334)
T 3tbh_A 84 GVSLAHLGAIRGYKVIITM 102 (334)
T ss_dssp HHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEE
Confidence 6799999999999998763
No 69
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=33.51 E-value=25 Score=24.61 Aligned_cols=18 Identities=28% Similarity=0.301 Sum_probs=15.9
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|+.++
T Consensus 81 g~alA~~a~~~G~~~~iv 98 (338)
T 1tzj_A 81 TRQVAAVAAHLGMKCVLV 98 (338)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHhCCceEEE
Confidence 568999999999998875
No 70
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=32.83 E-value=26 Score=24.70 Aligned_cols=18 Identities=17% Similarity=0.193 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|+.++
T Consensus 81 g~alA~~a~~~G~~~~iv 98 (341)
T 1f2d_A 81 TRMVAALAAKLGKKCVLI 98 (341)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHhCCceEEE
Confidence 568999999999998874
No 71
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=32.35 E-value=31 Score=24.67 Aligned_cols=18 Identities=22% Similarity=0.255 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 111 g~a~A~aa~~~G~~~~iv 128 (388)
T 1v8z_A 111 GVATAMAGALLGMKVDIY 128 (388)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 479999999999998774
No 72
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=31.55 E-value=31 Score=24.76 Aligned_cols=18 Identities=50% Similarity=0.691 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 105 g~alA~aa~~~G~~~~iv 122 (364)
T 4h27_A 105 GMAAAYAARQLGVPATIV 122 (364)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHhCCceEEE
Confidence 478999999999998875
No 73
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=31.26 E-value=32 Score=24.35 Aligned_cols=18 Identities=11% Similarity=0.233 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 100 g~alA~aa~~~G~~~~iv 117 (342)
T 2gn0_A 100 AQGVSLSCAMLGIDGKVV 117 (342)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 469999999999998875
No 74
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=30.97 E-value=28 Score=25.22 Aligned_cols=18 Identities=28% Similarity=0.410 Sum_probs=15.9
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 124 g~a~A~aa~~~G~~~~iv 141 (398)
T 4d9i_A 124 GRGVAWAAQQLGQNAVIY 141 (398)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 578999999999998775
No 75
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=30.97 E-value=38 Score=24.24 Aligned_cols=18 Identities=22% Similarity=0.217 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|+.++
T Consensus 120 g~a~A~aa~~~G~~~~iv 137 (366)
T 3iau_A 120 AQGVALAGQRLNCVAKIV 137 (366)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhCCceEEE
Confidence 478999999999998775
No 76
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=30.92 E-value=33 Score=25.13 Aligned_cols=18 Identities=33% Similarity=0.377 Sum_probs=15.9
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+||+++
T Consensus 157 G~AlA~aaa~~Gl~~~iv 174 (389)
T 1wkv_A 157 GVALSAVARLYGYRARVY 174 (389)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCeEEEE
Confidence 379999999999998875
No 77
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=29.80 E-value=34 Score=24.63 Aligned_cols=18 Identities=50% Similarity=0.691 Sum_probs=15.9
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 105 g~alA~aa~~~G~~~~iv 122 (372)
T 1p5j_A 105 GMAAAYAARQLGVPATIV 122 (372)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 568999999999998875
No 78
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=29.76 E-value=1.2e+02 Score=19.80 Aligned_cols=24 Identities=8% Similarity=-0.060 Sum_probs=18.5
Q ss_pred HHHHHHHHHhcCCCeEEEEeeecCCC
Q 034733 21 GAAVAYVADLFKVPAIFVKAVTDLVD 46 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~iR~ISD~a~ 46 (85)
+-+++++....++|++.- ..|..+
T Consensus 81 s~Gl~~v~L~~~vPV~~g--t~~~~e 104 (156)
T 2b99_A 81 SLGLMLAQLMTNKHIIEV--FVHEDE 104 (156)
T ss_dssp HHHHHHHHHHHTCCEEEE--ECCGGG
T ss_pred HHHHHHHHhhhCCCEEEE--eCCCHH
Confidence 457999999999999988 555433
No 79
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=29.71 E-value=31 Score=24.93 Aligned_cols=18 Identities=22% Similarity=0.289 Sum_probs=16.0
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|+.++
T Consensus 115 g~a~A~aa~~~G~~~~i~ 132 (396)
T 1qop_B 115 GVASALASALLGLKCRIY 132 (396)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHCCCcEEEE
Confidence 468999999999998875
No 80
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=28.91 E-value=31 Score=25.88 Aligned_cols=18 Identities=22% Similarity=0.283 Sum_probs=16.0
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 125 g~a~A~~a~~~G~~~~iv 142 (527)
T 3pc3_A 125 GIGLAMACAVKGYKCIIV 142 (527)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHhCCeEEEE
Confidence 478999999999999876
No 81
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=28.84 E-value=32 Score=24.34 Aligned_cols=18 Identities=33% Similarity=0.194 Sum_probs=15.5
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 89 g~alA~~a~~~G~~~~iv 106 (351)
T 3aey_A 89 AASAAAYAARAGILAIVV 106 (351)
T ss_dssp HHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 468999999999998775
No 82
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=28.06 E-value=34 Score=25.22 Aligned_cols=18 Identities=22% Similarity=0.361 Sum_probs=16.0
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|+.++
T Consensus 142 G~A~A~aaa~~G~~~~I~ 159 (422)
T 2o2e_A 142 GVATATACALLGLDCVIY 159 (422)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 469999999999998875
No 83
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=28.05 E-value=34 Score=24.18 Aligned_cols=18 Identities=22% Similarity=0.078 Sum_probs=15.4
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 91 g~alA~~a~~~G~~~~i~ 108 (352)
T 2zsj_A 91 SASAAAYAARAGLRAYVL 108 (352)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHhcCCcEEEE
Confidence 468999999999998775
No 84
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=27.92 E-value=34 Score=25.03 Aligned_cols=18 Identities=39% Similarity=0.575 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|+.++
T Consensus 138 g~avA~aaa~~Gi~~~I~ 155 (418)
T 1x1q_A 138 GVSVATVAALFGLECVVY 155 (418)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 459999999999998875
No 85
>3zcc_A HAMP, osmolarity sensor protein ENVZ; signaling protein, signal transduction, membrane protein, signalling, chimera; 1.25A {Archaeoglobus fulgidus} PDB: 3zrw_A 3zrv_A 3zrx_A 3zrw_B 2lfr_A 2lfs_A 1joy_A 2l7h_A 2l7i_A 2y20_A 2y21_A 2y0q_A 2y0t_A
Probab=26.84 E-value=10 Score=21.15 Aligned_cols=50 Identities=14% Similarity=0.213 Sum_probs=34.1
Q ss_pred HHHHHHHhcCCCeEEEEeeecCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Q 034733 23 AVAYVADLFKVPAIFVKAVTDLVDGDKPTAEEFMQNLVAVTAALEQSVSQVID 75 (85)
Q Consensus 23 AiA~vc~~~~vPf~~iR~ISD~a~~~~~~~~~f~~~~~~~s~~~~~~v~~~l~ 75 (85)
-++.++|..+.|.-.|++.++...+.. +.+...+...+..+...+-.+++
T Consensus 63 ~~~~~shel~tpl~~i~~~~e~l~~~~---~~~~~~i~~~~~~l~~~i~~ll~ 112 (114)
T 3zcc_A 63 LMAGVSHDLRTPLTRIRLATEMMSEQD---GYLAESINKDIEECNAIIEQFID 112 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCGGG---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHcChHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHh
Confidence 477889999999999999888875433 34434555555555566655554
No 86
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=26.54 E-value=37 Score=25.40 Aligned_cols=19 Identities=21% Similarity=0.279 Sum_probs=16.6
Q ss_pred HHHHHHHHHhcCCCeEEEE
Q 034733 21 GAAVAYVADLFKVPAIFVK 39 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~iR 39 (85)
|.|+|.+|...|+|++++=
T Consensus 187 G~AlA~aAa~~Gl~~~Ivm 205 (430)
T 4aec_A 187 GIGLAFIAASRGYRLILTM 205 (430)
T ss_dssp HHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHhCCEEEEEE
Confidence 5789999999999998763
No 87
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=25.55 E-value=40 Score=23.97 Aligned_cols=18 Identities=17% Similarity=0.084 Sum_probs=15.6
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 97 g~alA~~a~~~G~~~~i~ 114 (360)
T 2d1f_A 97 SASAAAYAARAGITCAVL 114 (360)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 468999999999998775
No 88
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=24.67 E-value=42 Score=25.01 Aligned_cols=18 Identities=28% Similarity=0.318 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|.|+|.+|...|+|++++
T Consensus 173 G~AlA~aaa~~Gi~~~Iv 190 (435)
T 1jbq_A 173 GIGLALAAAVRGYRCIIV 190 (435)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHcCCeEEEE
Confidence 479999999999998875
No 89
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=21.22 E-value=65 Score=20.05 Aligned_cols=17 Identities=12% Similarity=0.112 Sum_probs=15.9
Q ss_pred cHHHHHHHHHhcCCCeE
Q 034733 20 EGAAVAYVADLFKVPAI 36 (85)
Q Consensus 20 E~aAiA~vc~~~~vPf~ 36 (85)
+++.|-..|-.++||++
T Consensus 113 d~~~iRR~Av~~~IP~~ 129 (143)
T 2yvq_A 113 DNYVIRRTAVDSGIPLL 129 (143)
T ss_dssp HHHHHHHHHHHTTCCEE
T ss_pred cHHHHHHHHHHhCCCeE
Confidence 78999999999999987
No 90
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=21.16 E-value=60 Score=24.36 Aligned_cols=18 Identities=22% Similarity=0.289 Sum_probs=16.0
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
|+|+|.+|...|+|++++
T Consensus 196 G~AlA~~a~~~Gi~~~I~ 213 (486)
T 1e5x_A 196 SAALSAYCASAGIPSIVF 213 (486)
T ss_dssp HHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCeEEEE
Confidence 579999999999998775
No 91
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=20.74 E-value=72 Score=24.44 Aligned_cols=18 Identities=28% Similarity=0.420 Sum_probs=15.9
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 034733 21 GAAVAYVADLFKVPAIFV 38 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~i 38 (85)
+.|+|.+|...|+|++++
T Consensus 91 g~avA~aa~~lGi~~~Iv 108 (514)
T 1tdj_A 91 AQGVAFSSARLGVKALIV 108 (514)
T ss_dssp HHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCcEEEE
Confidence 468999999999998875
No 92
>3qel_B Glutamate [NMDA] receptor subunit epsilon-2; ION channel, allosteric modulation, phenylethanolamine, N-glycosylation, extracellular; HET: NAG BMA MAN FUC QEL; 2.60A {Rattus norvegicus} PDB: 3qem_B* 3jpw_A* 3jpy_A*
Probab=20.71 E-value=67 Score=22.54 Aligned_cols=25 Identities=12% Similarity=0.223 Sum_probs=20.6
Q ss_pred ccHHH--HHHHHHhcCCCeEEEEeeec
Q 034733 19 MEGAA--VAYVADLFKVPAIFVKAVTD 43 (85)
Q Consensus 19 ME~aA--iA~vc~~~~vPf~~iR~ISD 43 (85)
.++.| ++.+|..+++|.+..-+.+.
T Consensus 75 ~~a~a~~v~~i~~~~~iP~IS~~at~~ 101 (364)
T 3qel_B 75 QEAIAQILDFISAQTLTPILGIHGGSS 101 (364)
T ss_dssp CTHHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred chHHHHHHHHHHhccCCCEEEeecCCC
Confidence 45667 89999999999999986543
No 93
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=20.37 E-value=58 Score=24.09 Aligned_cols=19 Identities=5% Similarity=0.093 Sum_probs=16.4
Q ss_pred HHHHHHHHHhcCCCeEEEE
Q 034733 21 GAAVAYVADLFKVPAIFVK 39 (85)
Q Consensus 21 ~aAiA~vc~~~~vPf~~iR 39 (85)
|.|+|.+|...|+|+.++=
T Consensus 172 g~avA~~aa~~G~~~~Ivm 190 (442)
T 3ss7_X 172 GLSIGIMSARIGFKVTVHM 190 (442)
T ss_dssp HHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHhCCcEEEEE
Confidence 5689999999999998763
No 94
>2cob_A LCOR protein; MLR2, KIAA1795, helix-turn-helix, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.1.15
Probab=20.31 E-value=21 Score=20.57 Aligned_cols=17 Identities=24% Similarity=0.608 Sum_probs=13.8
Q ss_pred ccH-HHHHHHHHhcCCCe
Q 034733 19 MEG-AAVAYVADLFKVPA 35 (85)
Q Consensus 19 ME~-aAiA~vc~~~~vPf 35 (85)
+++ -++-++|..+|||-
T Consensus 27 r~g~mS~~~Aak~yGVP~ 44 (70)
T 2cob_A 27 MSGKMSVSKAQSIYGIPH 44 (70)
T ss_dssp HTTSSCHHHHHHHHTCCH
T ss_pred HcCCccHHHHHHHhCCCh
Confidence 455 68899999999984
Done!