Your job contains 1 sequence.
>034735
MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTDSSDDSDDIVVCEISKNRRVSVRNWQGKV
WVDIREFYVKEGKKFPGKKGSLLSF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034735
(85 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2184747 - symbol:KIWI species:3702 "Arabidopsi... 260 2.1e-22 1
TAIR|locus:2184732 - symbol:AT5G09240 species:3702 "Arabi... 173 3.4e-13 1
TAIR|locus:2123416 - symbol:KELP species:3702 "Arabidopsi... 112 9.2e-09 2
ASPGD|ASPL0000000236 - symbol:AN5806 species:162425 "Emer... 117 2.9e-07 1
UNIPROTKB|E2R6X3 - symbol:SUB1 "Uncharacterized protein" ... 99 3.2e-07 2
UNIPROTKB|F6Y016 - symbol:LOC479283 "Uncharacterized prot... 99 3.2e-07 2
UNIPROTKB|J9P938 - symbol:J9P938 "Uncharacterized protein... 99 3.2e-07 2
UNIPROTKB|J9NRQ9 - symbol:SUB1 "Uncharacterized protein" ... 96 3.2e-07 2
ZFIN|ZDB-GENE-050522-151 - symbol:sub1a "SUB1 homolog a (... 111 1.3e-06 1
UNIPROTKB|Q5ZK63 - symbol:SUB1 "Activated RNA polymerase ... 103 9.0e-06 1
UNIPROTKB|A7YWC6 - symbol:SUB1 "Uncharacterized protein" ... 99 2.4e-05 1
UNIPROTKB|P53999 - symbol:SUB1 "Activated RNA polymerase ... 99 2.4e-05 1
UNIPROTKB|I3LQI3 - symbol:SUB1 "Uncharacterized protein" ... 99 2.4e-05 1
MGI|MGI:104811 - symbol:Sub1 "SUB1 homolog (S. cerevisiae... 99 2.4e-05 1
RGD|621582 - symbol:Sub1 "SUB1 homolog (S. cerevisiae)" s... 99 2.4e-05 1
ZFIN|ZDB-GENE-040718-209 - symbol:sub1b "SUB1 homolog b (... 98 3.0e-05 1
FB|FBgn0015299 - symbol:Ssb-c31a "Single stranded-binding... 94 8.1e-05 1
UNIPROTKB|G4NEJ8 - symbol:MGG_00780 "Uncharacterized prot... 93 0.00011 1
POMBASE|SPAC16A10.02 - symbol:sub1 "transcription coactiv... 86 0.00057 1
>TAIR|locus:2184747 [details] [associations]
symbol:KIWI species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 EMBL:AL391712 GO:GO:0003713
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447 EMBL:AF053302
EMBL:BT004745 IPI:IPI00531083 PIR:T52113 RefSeq:NP_196487.1
UniGene:At.10039 ProteinModelPortal:O65154 SMR:O65154 IntAct:O65154
STRING:O65154 PaxDb:O65154 PRIDE:O65154 EnsemblPlants:AT5G09250.1
GeneID:830784 KEGG:ath:AT5G09250 TAIR:At5g09250
HOGENOM:HOG000239157 InParanoid:O65154 OMA:WIDIREF PhylomeDB:O65154
ProtClustDB:CLSN2916867 Genevestigator:O65154 GermOnline:AT5G09250
Uniprot:O65154
Length = 107
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 51/85 (60%), Positives = 59/85 (69%)
Query: 1 MSGKGKRKEEEEYDSDGSVDGHAPPKKASKTXXXXXXXX-IVVCEISKNRRVSVRNWQGK 59
MS +GKRK+E+ SD + HAP KK +K IVVC ISKNRRVSVRNW GK
Sbjct: 1 MSSRGKRKDEDVRASDDESETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGK 60
Query: 60 VWVDIREFYVKEGKKFPGKKGSLLS 84
+W+DIREFYVK+GK PGKKG LS
Sbjct: 61 IWIDIREFYVKDGKTLPGKKGISLS 85
>TAIR|locus:2184732 [details] [associations]
symbol:AT5G09240 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009408 "response to heat"
evidence=RCA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
EMBL:CP002688 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
Gene3D:2.30.31.10 SUPFAM:SSF54447 UniGene:At.10037 UniGene:At.70268
IPI:IPI00519075 RefSeq:NP_850798.2 UniGene:At.5322
ProteinModelPortal:F4KCI8 EnsemblPlants:AT5G09240.2 GeneID:830783
KEGG:ath:AT5G09240 OMA:RNHEEDI PhylomeDB:F4KCI8 Uniprot:F4KCI8
Length = 138
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 39/88 (44%), Positives = 52/88 (59%)
Query: 1 MSGKGKRKEEEEYDSDGSVDG--HAPPKKASKTXXXXXXXXIVVCEISKNRRVSVRNWQG 58
MS GKRK+E+ SD + HAPPKK +K I +C + KNRRV VRN G
Sbjct: 1 MSENGKRKDEDVRASDDRDESETHAPPKKVAKPADEIED--IFICNLDKNRRVFVRNCNG 58
Query: 59 KVWVDIREFYVKEGKKFP--GKKGSLLS 84
++W+ IR+F+VK+G P K+G LS
Sbjct: 59 RIWIAIRQFFVKDGITLPCNSKQGISLS 86
>TAIR|locus:2123416 [details] [associations]
symbol:KELP species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003173 InterPro:IPR009044
InterPro:IPR009057 Pfam:PF02229 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 GO:GO:0003713 InterPro:IPR014876 Pfam:PF08766
EMBL:AL161518 EMBL:AF080118 EMBL:AL049525 EMBL:AF053303
EMBL:AY085896 EMBL:BT005847 IPI:IPI00522129 PIR:T52114
RefSeq:NP_001078372.1 RefSeq:NP_192830.1 UniGene:At.21693
ProteinModelPortal:O65155 SMR:O65155 IntAct:O65155 PaxDb:O65155
PRIDE:O65155 DNASU:826690 EnsemblPlants:AT4G10920.1
EnsemblPlants:AT4G10920.2 GeneID:826690 KEGG:ath:AT4G10920
GeneFarm:2402 TAIR:At4g10920 eggNOG:NOG299238 HOGENOM:HOG000238208
InParanoid:O65155 OMA:LVSIREY PhylomeDB:O65155
ProtClustDB:CLSN2686069 Genevestigator:O65155 GermOnline:AT4G10920
Gene3D:2.30.31.10 InterPro:IPR017415 PIRSF:PIRSF038156
SUPFAM:SSF54447 Uniprot:O65155
Length = 165
Score = 112 (44.5 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 40 IVVCEISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGSLLS 84
+++C +S RRV+++ ++GK V IRE+Y K+GK+ P KG L+
Sbjct: 96 LIICRLSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLT 140
Score = 31 (16.0 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 8 KEEEEYDSDGSV 19
K +E+D DG +
Sbjct: 85 KGNKEFDDDGDL 96
>ASPGD|ASPL0000000236 [details] [associations]
symbol:AN5806 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] InterPro:IPR003173
InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355 GO:GO:0003677
EMBL:BN001301 GO:GO:0003713 EMBL:AACD01000100 eggNOG:NOG299238
Gene3D:2.30.31.10 SUPFAM:SSF54447 OrthoDB:EOG4WQ4C5
RefSeq:XP_663410.1 ProteinModelPortal:Q5B0X4
EnsemblFungi:CADANIAT00007241 GeneID:2871080 KEGG:ani:AN5806.2
HOGENOM:HOG000213471 OMA:LVNIREY Uniprot:Q5B0X4
Length = 168
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKG 80
EISK RRV++ +++GK V+IRE+Y K+G++ PGKKG
Sbjct: 58 EISKMRRVTISSFRGKTMVNIREYYEKDGEELPGKKG 94
>UNIPROTKB|E2R6X3 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0006355 GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10
SUPFAM:SSF54447 RefSeq:XP_536425.3 Ensembl:ENSCAFT00000029964
GeneID:479283 KEGG:cfa:479283 NextBio:20854490 Uniprot:E2R6X3
Length = 127
Score = 99 (39.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGSLLS 84
+I K R VSVR+++GKV +DIRE+++ EG+ PG+KG L+
Sbjct: 65 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLN 106
Score = 29 (15.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 14 DSDGSVDGHAPPKK 27
DSD VD KK
Sbjct: 16 DSDSEVDKKLKRKK 29
>UNIPROTKB|F6Y016 [details] [associations]
symbol:LOC479283 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 OMA:QWNQLKD Ensembl:ENSCAFT00000029964
EMBL:AAEX03003186 EMBL:AAEX03003187 Uniprot:F6Y016
Length = 144
Score = 99 (39.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGSLLS 84
+I K R VSVR+++GKV +DIRE+++ EG+ PG+KG L+
Sbjct: 82 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLN 123
Score = 29 (15.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 14 DSDGSVDGHAPPKK 27
DSD VD KK
Sbjct: 33 DSDSEVDKKLKRKK 46
>UNIPROTKB|J9P938 [details] [associations]
symbol:J9P938 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 EMBL:AAEX03002980
Ensembl:ENSCAFT00000026464 OMA:VDIREHY Uniprot:J9P938
Length = 132
Score = 99 (39.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGSLLS 84
+I K R VSVR+++GKV +DIRE+++ EG+ PG+KG L+
Sbjct: 70 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLN 111
Score = 29 (15.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 7/14 (50%), Positives = 7/14 (50%)
Query: 14 DSDGSVDGHAPPKK 27
DSD VD KK
Sbjct: 21 DSDSEVDKKLKRKK 34
>UNIPROTKB|J9NRQ9 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0006355
GO:GO:0003677 GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 OMA:IFKITRT EMBL:AAEX03016493
Ensembl:ENSCAFT00000037797 Uniprot:J9NRQ9
Length = 125
Score = 96 (38.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 20/42 (47%), Positives = 32/42 (76%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGSLLS 84
+I K R +SVR+++GKV +DIRE+++ EG+ PG+KG L+
Sbjct: 63 QIGKMRYLSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLN 104
Score = 32 (16.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 4 KGKR--KEEEEYDSDGSVDGHAPPKK 27
K KR +E DSD VD KK
Sbjct: 3 KYKRTLNKESGSDSDSEVDKKLKRKK 28
>ZFIN|ZDB-GENE-050522-151 [details] [associations]
symbol:sub1a "SUB1 homolog a (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
ZFIN:ZDB-GENE-050522-151 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802
HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2 EMBL:BX664706
EMBL:BC095096 IPI:IPI00503863 RefSeq:NP_001018376.1
UniGene:Dr.84297 SMR:Q504B1 STRING:Q504B1
Ensembl:ENSDART00000075485 Ensembl:ENSDART00000143848 GeneID:553561
KEGG:dre:553561 CTD:553561 InParanoid:Q504B1 NextBio:20880301
Uniprot:Q504B1
Length = 123
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 4 KGKRKEEEEYDSDGSVDGHAPPKKASKTXXXXXXXXIVVCEISKNRRVSVRNWQGKVWVD 63
K KRK++ + ASK+ + +I K R VSVR+++GKV +D
Sbjct: 23 KAKRKKQATPEKPSKKQKSGESSSASKSSSSNKNDNMF--QIGKMRYVSVRDFKGKVLID 80
Query: 64 IREFYV-KEGKKFPGKKGSLLS 84
IRE+++ +EG+ PG+KG L+
Sbjct: 81 IREYWMDQEGEMKPGRKGISLN 102
>UNIPROTKB|Q5ZK63 [details] [associations]
symbol:SUB1 "Activated RNA polymerase II transcriptional
coactivator p15" species:9031 "Gallus gallus" [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0003713 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 EMBL:AJ720221 IPI:IPI00570734
RefSeq:NP_001008479.1 UniGene:Gga.11479 HSSP:P53999
ProteinModelPortal:Q5ZK63 SMR:Q5ZK63 STRING:Q5ZK63 PRIDE:Q5ZK63
GeneID:427425 KEGG:gga:427425 CTD:10923 eggNOG:NOG280527
HOVERGEN:HBG028243 NextBio:20828685 Uniprot:Q5ZK63
Length = 126
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 4 KGKRKEEEEYDSDGSVDGHAPPKKASKTXXXXXXXXIVVCEISKNRRVSVRNWQGKVWVD 63
K KRK++ + K + + + +I K R VSVR+++GKV +D
Sbjct: 24 KAKRKKQAAPEKPVKKQKTGESSKGAASSKQSSNRDENMFQIGKMRYVSVRDFKGKVLID 83
Query: 64 IREFYV-KEGKKFPGKKGSLLS 84
IRE+++ +EG+ PG+KG L+
Sbjct: 84 IREYWMDQEGEMKPGRKGISLN 105
>UNIPROTKB|A7YWC6 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005730 GO:GO:0006357 GO:GO:0005667 GO:GO:0003713
GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802 CTD:10923
HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2 EMBL:DAAA02050690
EMBL:BC134490 IPI:IPI00695331 RefSeq:NP_001098877.1
UniGene:Bt.23529 SMR:A7YWC6 STRING:A7YWC6
Ensembl:ENSBTAT00000029284 GeneID:533984 KEGG:bta:533984
InParanoid:A7YWC6 NextBio:20876218 Uniprot:A7YWC6
Length = 127
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGSLLS 84
+I K R VSVR+++GKV +DIRE+++ EG+ PG+KG L+
Sbjct: 65 QIGKMRYVSVRDFKGKVLIDIREYWMDAEGEMKPGRKGISLN 106
>UNIPROTKB|P53999 [details] [associations]
symbol:SUB1 "Activated RNA polymerase II transcriptional
coactivator p15" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005730 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10
SUPFAM:SSF54447 CTD:10923 HOVERGEN:HBG028243 EMBL:X79805
EMBL:U12979 EMBL:BC009610 EMBL:BC010537 EMBL:BC018189 EMBL:BC022339
IPI:IPI00221222 PIR:A54670 RefSeq:NP_006704.3 UniGene:Hs.229641
PDB:1PCF PDB:2C62 PDB:2PHE PDBsum:1PCF PDBsum:2C62 PDBsum:2PHE
ProteinModelPortal:P53999 SMR:P53999 DIP:DIP-29044N IntAct:P53999
MINT:MINT-138673 STRING:P53999 PhosphoSite:P53999 DMDM:1709514
PaxDb:P53999 PeptideAtlas:P53999 PRIDE:P53999
Ensembl:ENST00000265073 Ensembl:ENST00000502897
Ensembl:ENST00000506237 Ensembl:ENST00000512913
Ensembl:ENST00000515355 GeneID:10923 KEGG:hsa:10923 UCSC:uc003jhs.2
GeneCards:GC05P032622 HGNC:HGNC:19985 HPA:CAB015351 HPA:HPA001311
MIM:600503 neXtProt:NX_P53999 PharmGKB:PA142670858
InParanoid:P53999 OMA:QWNQLKD OrthoDB:EOG4NS3D2 PhylomeDB:P53999
ChiTaRS:SUB1 EvolutionaryTrace:P53999 GenomeRNAi:10923
NextBio:41499 ArrayExpress:P53999 Bgee:P53999 CleanEx:HS_SUB1
Genevestigator:P53999 GermOnline:ENSG00000113387 Uniprot:P53999
Length = 127
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGSLLS 84
+I K R VSVR+++GKV +DIRE+++ EG+ PG+KG L+
Sbjct: 65 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLN 106
>UNIPROTKB|I3LQI3 [details] [associations]
symbol:SUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0005730 GO:GO:0006357 GO:GO:0005667 GO:GO:0003713
GO:GO:0003697 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 OMA:QWNQLKD EMBL:FP085384
Ensembl:ENSSSCT00000023763 Uniprot:I3LQI3
Length = 134
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYVK-EGKKFPGKKGSLLS 84
+I K R VSVR+++GKV +DIRE+++ EG+ PG+KG L+
Sbjct: 72 QIGKMRYVSVRDFKGKVLIDIREYWMDPEGEMKPGRKGISLN 113
>MGI|MGI:104811 [details] [associations]
symbol:Sub1 "SUB1 homolog (S. cerevisiae)" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 MGI:MGI:104811
GO:GO:0005730 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
GO:GO:0003713 GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10
SUPFAM:SSF54447 HOGENOM:HOG000239157 GeneTree:ENSGT00390000008802
CTD:10923 HOVERGEN:HBG028243 OMA:QWNQLKD OrthoDB:EOG4NS3D2
ChiTaRS:SUB1 EMBL:J03750 EMBL:AK048371 EMBL:AK049260 EMBL:AK132021
EMBL:AK146335 EMBL:AK151734 EMBL:AK154114 EMBL:BC010967
IPI:IPI00225633 PIR:A28084 RefSeq:NP_035424.1 UniGene:Mm.41746
ProteinModelPortal:P11031 SMR:P11031 STRING:P11031
PhosphoSite:P11031 PaxDb:P11031 PRIDE:P11031
Ensembl:ENSMUST00000022816 Ensembl:ENSMUST00000110504 GeneID:20024
KEGG:mmu:20024 UCSC:uc007vhj.1 InParanoid:P11031 NextBio:297547
Bgee:P11031 CleanEx:MM_SUB1 Genevestigator:P11031
GermOnline:ENSMUSG00000022205 Uniprot:P11031
Length = 127
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 20/42 (47%), Positives = 32/42 (76%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGSLLS 84
+I K R VSVR+++GK+ +DIRE+++ EG+ PG+KG L+
Sbjct: 65 QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLN 106
>RGD|621582 [details] [associations]
symbol:Sub1 "SUB1 homolog (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0003697 "single-stranded DNA binding"
evidence=IEA;ISO] [GO:0003713 "transcription coactivator activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] InterPro:IPR003173 InterPro:IPR009044
Pfam:PF02229 RGD:621582 GO:GO:0005634 GO:GO:0005730 GO:GO:0006357
GO:GO:0006351 GO:GO:0005667 GO:GO:0003713 GO:GO:0003697
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 CTD:10923 HOVERGEN:HBG028243 OMA:QWNQLKD
OrthoDB:EOG4NS3D2 EMBL:BC088346 EMBL:K02816 IPI:IPI00208123
PIR:A23063 RefSeq:NP_001009618.1 UniGene:Rn.231328 UniGene:Rn.8706
ProteinModelPortal:Q63396 SMR:Q63396 IntAct:Q63396
MINT:MINT-4598677 STRING:Q63396 PRIDE:Q63396
Ensembl:ENSRNOT00000015443 GeneID:192269 KEGG:rno:192269
InParanoid:Q63396 NextBio:622964 Genevestigator:Q63396
GermOnline:ENSRNOG00000011558 Uniprot:Q63396
Length = 127
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 20/42 (47%), Positives = 32/42 (76%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYV-KEGKKFPGKKGSLLS 84
+I K R VSVR+++GK+ +DIRE+++ EG+ PG+KG L+
Sbjct: 65 QIGKMRYVSVRDFKGKILIDIREYWMDSEGEMKPGRKGISLN 106
>ZFIN|ZDB-GENE-040718-209 [details] [associations]
symbol:sub1b "SUB1 homolog b (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
ZFIN:ZDB-GENE-040718-209 GO:GO:0006355 GO:GO:0003677 GO:GO:0003713
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
HOGENOM:HOG000239157 EMBL:BX470118 GeneTree:ENSGT00390000008802
HOVERGEN:HBG028243 OMA:LDQWKIL OrthoDB:EOG4NS3D2 EMBL:BC076294
IPI:IPI00505413 RefSeq:NP_001002505.1 UniGene:Dr.13991 SMR:Q6DGP6
Ensembl:ENSDART00000011229 GeneID:436778 KEGG:dre:436778 CTD:436778
InParanoid:Q6DGP6 NextBio:20831213 Uniprot:Q6DGP6
Length = 124
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 44 EISKNRRVSVRNWQGKVWVDIREFYVKE-GKKFPGKKGSLLS 84
+I K R VSVR+++GKV +DIRE+++ + G+ PGKKG L+
Sbjct: 62 QIGKLRYVSVRDFKGKVLIDIREYWMDQAGEMKPGKKGISLN 103
>FB|FBgn0015299 [details] [associations]
symbol:Ssb-c31a "Single stranded-binding protein c31A"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=ISS;NAS;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0003713 "transcription coactivator activity" evidence=ISS]
InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229 GO:GO:0005634
GO:GO:0045892 EMBL:AE014134 GO:GO:0006351 GO:GO:0003713
GO:GO:0003697 eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
GeneTree:ENSGT00390000008802 EMBL:U18971 EMBL:BT023261 PIR:S66164
RefSeq:NP_477136.1 UniGene:Dm.2642 ProteinModelPortal:Q9VLR5
SMR:Q9VLR5 MINT:MINT-1003322 STRING:Q9VLR5 PaxDb:Q9VLR5
PRIDE:Q9VLR5 EnsemblMetazoa:FBtr0079590 GeneID:34120
KEGG:dme:Dmel_CG8396 CTD:34120 FlyBase:FBgn0015299
InParanoid:Q9VLR5 OMA:LDQWKIL OrthoDB:EOG4DZ0BW PhylomeDB:Q9VLR5
GenomeRNAi:34120 NextBio:786953 Bgee:Q9VLR5 GermOnline:CG8396
Uniprot:Q9VLR5
Length = 110
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 28/86 (32%), Positives = 40/86 (46%)
Query: 7 RKEEEEYDSDGSVDGHAPP--KKASKTXX------XXXXXXIVVCEISKNRRVSVRNWQG 58
+K++ DSD D P KKA ++ + R+V + ++G
Sbjct: 5 KKKDSSSDSDSGPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRG 64
Query: 59 KVWVDIREFYVKEGKKFPGKKGSLLS 84
+ VDIREFY K G+ PGKKG LS
Sbjct: 65 RKSVDIREFYDKGGQILPGKKGISLS 90
>UNIPROTKB|G4NEJ8 [details] [associations]
symbol:MGG_00780 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
GO:GO:0006355 EMBL:CM001235 GO:GO:0003677 GO:GO:0003713
Gene3D:2.30.31.10 SUPFAM:SSF54447 RefSeq:XP_003718212.1 PDB:4AGH
PDBsum:4AGH ProteinModelPortal:G4NEJ8 EnsemblFungi:MGG_00780T0
GeneID:2674441 KEGG:mgr:MGG_00780 Uniprot:G4NEJ8
Length = 162
Score = 93 (37.8 bits), Expect = 0.00011, P = 0.00011
Identities = 30/87 (34%), Positives = 41/87 (47%)
Query: 1 MSGKGKRKEEEEYDSDGSV--DGHAPPKKASKTXXXXXXXXIVV-----CEISKNRRVSV 53
M+ K KR +EE S GS AP KKA + EIS RRV +
Sbjct: 5 MTSK-KRARDEEAQSGGSEAETKPAPVKKAKSKASNPGGSQVDAEGNPFWEISDKRRVGI 63
Query: 54 RNWQGKVWVDIREFYVKEGKKFPGKKG 80
++ +++IRE+Y G+ PGKKG
Sbjct: 64 SQFKKMDFINIREYYEAGGEMKPGKKG 90
>POMBASE|SPAC16A10.02 [details] [associations]
symbol:sub1 "transcription coactivator PC4"
species:4896 "Schizosaccharomyces pombe" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0060261 "positive regulation of
transcription initiation from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR003173 InterPro:IPR009044 Pfam:PF02229
PomBase:SPAC16A10.02 GO:GO:0005634 EMBL:CU329670 GO:GO:0006351
GO:GO:0003713 GO:GO:0003690 GO:GO:0003697 GO:GO:0060261
eggNOG:NOG299238 Gene3D:2.30.31.10 SUPFAM:SSF54447
OrthoDB:EOG4WQ4C5 PIR:T37767 RefSeq:NP_594042.1
ProteinModelPortal:P87294 STRING:P87294 EnsemblFungi:SPAC16A10.02.1
GeneID:2542309 KEGG:spo:SPAC16A10.02 NextBio:20803370
Uniprot:P87294
Length = 136
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 46 SKNRRVSVRNWQGKVWVDIREFYVKEGKKFPGKKGSLLS 84
++ +R+++ ++G +V IRE+Y K+G PGKKG L+
Sbjct: 35 TEKKRITLSEFRGTRYVHIREYYEKDGDMLPGKKGIALN 73
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.132 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 85 77 0.00091 102 3 11 23 0.47 29
29 0.50 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 558 (59 KB)
Total size of DFA: 112 KB (2074 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.02u 0.13s 9.15t Elapsed: 00:00:00
Total cpu time: 9.02u 0.13s 9.15t Elapsed: 00:00:00
Start: Fri May 10 00:15:55 2013 End: Fri May 10 00:15:55 2013