Query 034737
Match_columns 85
No_of_seqs 110 out of 1755
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 05:56:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034737.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/034737hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0300 DltE Short-chain dehyd 99.7 8.3E-17 1.8E-21 97.7 8.9 71 6-84 6-77 (265)
2 KOG1205 Predicted dehydrogenas 99.7 7E-16 1.5E-20 94.4 7.6 75 2-84 9-84 (282)
3 PRK08862 short chain dehydroge 99.7 1.3E-15 2.8E-20 90.9 8.6 74 1-84 1-75 (227)
4 PRK07478 short chain dehydroge 99.6 2E-15 4.2E-20 90.8 8.9 74 1-84 2-76 (254)
5 PRK05854 short chain dehydroge 99.6 2.2E-15 4.8E-20 93.5 9.2 75 2-84 11-86 (313)
6 PRK08339 short chain dehydroge 99.6 2.6E-15 5.7E-20 91.1 9.0 75 1-84 4-79 (263)
7 PRK05867 short chain dehydroge 99.6 2.3E-15 5.1E-20 90.5 8.6 74 1-84 5-79 (253)
8 KOG1208 Dehydrogenases with di 99.6 5.4E-15 1.2E-19 92.0 8.7 74 3-84 33-107 (314)
9 COG4221 Short-chain alcohol de 99.6 5.5E-15 1.2E-19 88.4 8.2 68 6-84 6-74 (246)
10 PRK06139 short chain dehydroge 99.6 6.8E-15 1.5E-19 92.1 8.9 73 2-84 4-77 (330)
11 PRK07062 short chain dehydroge 99.6 1.2E-14 2.6E-19 87.9 9.1 75 2-84 5-80 (265)
12 PRK05876 short chain dehydroge 99.6 9.9E-15 2.1E-19 89.1 8.7 72 3-84 4-76 (275)
13 PRK07890 short chain dehydroge 99.6 1.3E-14 2.8E-19 87.2 8.9 74 1-84 1-75 (258)
14 COG3967 DltE Short-chain dehyd 99.6 3.8E-15 8.1E-20 87.4 6.1 70 1-84 1-71 (245)
15 PRK08085 gluconate 5-dehydroge 99.6 1.3E-14 2.8E-19 87.3 8.6 74 1-84 5-79 (254)
16 PRK07523 gluconate 5-dehydroge 99.6 1.6E-14 3.4E-19 87.0 8.8 73 2-84 7-80 (255)
17 PRK08589 short chain dehydroge 99.6 1.7E-14 3.8E-19 87.8 8.9 71 3-84 4-75 (272)
18 PRK05866 short chain dehydroge 99.6 1.8E-14 3.8E-19 88.8 8.9 73 2-84 37-110 (293)
19 PRK07035 short chain dehydroge 99.6 1.8E-14 4E-19 86.5 8.8 74 1-84 4-78 (252)
20 PRK08303 short chain dehydroge 99.6 2E-14 4.2E-19 89.1 9.0 72 3-84 6-88 (305)
21 PRK07063 short chain dehydroge 99.6 1.9E-14 4.2E-19 86.8 8.5 74 3-84 5-79 (260)
22 KOG1201 Hydroxysteroid 17-beta 99.6 2.1E-14 4.6E-19 87.9 8.5 71 3-84 36-107 (300)
23 PRK06172 short chain dehydroge 99.6 2.7E-14 5.9E-19 85.8 8.8 74 1-84 3-77 (253)
24 PRK07109 short chain dehydroge 99.6 2.7E-14 5.8E-19 89.4 9.0 72 3-84 6-78 (334)
25 PRK07576 short chain dehydroge 99.6 3.1E-14 6.7E-19 86.4 9.0 74 1-84 5-79 (264)
26 PRK06720 hypothetical protein; 99.6 4.2E-14 9.2E-19 81.4 8.9 74 1-84 12-86 (169)
27 PRK07791 short chain dehydroge 99.6 3.5E-14 7.7E-19 87.1 9.0 72 3-84 4-85 (286)
28 PRK06197 short chain dehydroge 99.6 3.4E-14 7.4E-19 87.7 8.9 75 2-84 13-88 (306)
29 PRK06935 2-deoxy-D-gluconate 3 99.6 4.2E-14 9.1E-19 85.3 9.1 72 2-84 12-84 (258)
30 PRK07097 gluconate 5-dehydroge 99.6 3.6E-14 7.9E-19 85.9 8.8 74 1-84 6-80 (265)
31 PRK08628 short chain dehydroge 99.6 3.4E-14 7.3E-19 85.6 8.5 72 2-84 4-76 (258)
32 PRK06124 gluconate 5-dehydroge 99.6 4.2E-14 9.2E-19 85.1 8.9 73 2-84 8-81 (256)
33 PRK06138 short chain dehydroge 99.6 3.5E-14 7.6E-19 85.1 8.5 73 1-84 1-74 (252)
34 PRK07814 short chain dehydroge 99.6 4.4E-14 9.5E-19 85.5 8.9 72 3-84 8-80 (263)
35 PRK08278 short chain dehydroge 99.6 5.9E-14 1.3E-18 85.5 9.2 74 1-84 2-83 (273)
36 PRK06194 hypothetical protein; 99.6 4.5E-14 9.7E-19 86.2 8.7 72 3-84 4-76 (287)
37 PRK06114 short chain dehydroge 99.6 6.3E-14 1.4E-18 84.4 9.2 74 1-84 4-79 (254)
38 PRK09072 short chain dehydroge 99.6 4.4E-14 9.5E-19 85.4 8.5 73 1-84 1-74 (263)
39 PRK07231 fabG 3-ketoacyl-(acyl 99.6 4.8E-14 1E-18 84.4 8.6 73 1-84 1-74 (251)
40 PRK08213 gluconate 5-dehydroge 99.6 4.7E-14 1E-18 85.1 8.6 73 2-84 9-82 (259)
41 PRK07825 short chain dehydroge 99.6 4E-14 8.7E-19 86.0 8.3 70 1-84 1-71 (273)
42 PRK08277 D-mannonate oxidoredu 99.6 5E-14 1.1E-18 85.8 8.6 73 2-84 7-80 (278)
43 PRK07453 protochlorophyllide o 99.5 4.4E-14 9.6E-19 87.8 8.5 72 3-84 4-76 (322)
44 PRK12481 2-deoxy-D-gluconate 3 99.5 5.5E-14 1.2E-18 84.7 8.6 72 1-84 4-76 (251)
45 TIGR03325 BphB_TodD cis-2,3-di 99.5 3.4E-14 7.4E-19 85.9 7.7 71 1-84 1-72 (262)
46 KOG0725 Reductases with broad 99.5 9.2E-14 2E-18 85.0 9.4 76 2-84 5-81 (270)
47 PRK08265 short chain dehydroge 99.5 7.5E-14 1.6E-18 84.5 8.7 69 3-84 4-73 (261)
48 PRK08217 fabG 3-ketoacyl-(acyl 99.5 9.4E-14 2E-18 83.1 8.9 74 1-84 1-75 (253)
49 PRK05653 fabG 3-ketoacyl-(acyl 99.5 1E-13 2.2E-18 82.5 8.9 74 1-84 1-75 (246)
50 PRK07774 short chain dehydroge 99.5 1E-13 2.2E-18 83.1 8.9 73 2-84 3-76 (250)
51 PRK08643 acetoin reductase; Va 99.5 8.8E-14 1.9E-18 83.7 8.6 70 6-84 2-72 (256)
52 PRK07454 short chain dehydroge 99.5 1.1E-13 2.3E-18 82.7 8.8 75 1-84 1-76 (241)
53 PRK07677 short chain dehydroge 99.5 1E-13 2.2E-18 83.4 8.6 70 6-84 1-71 (252)
54 PRK06113 7-alpha-hydroxysteroi 99.5 1.2E-13 2.6E-18 83.2 8.9 74 1-84 7-81 (255)
55 PRK12429 3-hydroxybutyrate deh 99.5 1.2E-13 2.5E-18 83.0 8.8 72 3-84 2-74 (258)
56 PF00106 adh_short: short chai 99.5 8.2E-14 1.8E-18 79.1 7.7 69 7-84 1-73 (167)
57 PRK08416 7-alpha-hydroxysteroi 99.5 1.2E-13 2.6E-18 83.6 8.8 74 2-84 5-80 (260)
58 PRK07533 enoyl-(acyl carrier p 99.5 1.3E-13 2.9E-18 83.4 8.9 73 1-84 6-81 (258)
59 TIGR01832 kduD 2-deoxy-D-gluco 99.5 1.4E-13 3E-18 82.4 8.9 72 1-84 1-73 (248)
60 PRK06125 short chain dehydroge 99.5 1.9E-13 4.2E-18 82.5 9.5 75 1-84 3-78 (259)
61 PRK09242 tropinone reductase; 99.5 1.4E-13 3E-18 83.0 8.8 75 2-84 6-81 (257)
62 PRK06200 2,3-dihydroxy-2,3-dih 99.5 8E-14 1.7E-18 84.3 7.8 70 2-84 3-73 (263)
63 PRK13394 3-hydroxybutyrate deh 99.5 1.4E-13 3E-18 82.9 8.7 72 3-84 5-77 (262)
64 PRK07984 enoyl-(acyl carrier p 99.5 1.4E-13 3E-18 83.8 8.7 71 3-84 4-77 (262)
65 PRK06079 enoyl-(acyl carrier p 99.5 1.1E-13 2.4E-18 83.5 8.1 70 2-84 4-76 (252)
66 KOG1014 17 beta-hydroxysteroid 99.5 1.3E-13 2.9E-18 84.8 8.3 65 6-78 49-113 (312)
67 PRK09186 flagellin modificatio 99.5 2E-13 4.2E-18 82.1 9.0 74 3-84 2-76 (256)
68 PRK07792 fabG 3-ketoacyl-(acyl 99.5 1.7E-13 3.6E-18 84.9 8.8 73 2-84 9-83 (306)
69 PRK05872 short chain dehydroge 99.5 1.3E-13 2.8E-18 84.9 8.3 71 3-84 7-78 (296)
70 PRK12823 benD 1,6-dihydroxycyc 99.5 2.1E-13 4.5E-18 82.3 8.9 71 3-84 6-77 (260)
71 PRK08415 enoyl-(acyl carrier p 99.5 2.1E-13 4.6E-18 83.4 9.0 73 1-84 1-76 (274)
72 PRK07904 short chain dehydroge 99.5 2.4E-13 5.2E-18 82.2 8.8 71 6-84 8-81 (253)
73 PRK08251 short chain dehydroge 99.5 2.6E-13 5.7E-18 81.3 8.8 72 6-84 2-74 (248)
74 PRK07666 fabG 3-ketoacyl-(acyl 99.5 2.8E-13 6.1E-18 80.8 8.9 72 3-84 5-77 (239)
75 PRK07067 sorbitol dehydrogenas 99.5 1.7E-13 3.6E-18 82.6 8.0 71 1-84 2-73 (257)
76 PRK08594 enoyl-(acyl carrier p 99.5 2.4E-13 5.2E-18 82.3 8.7 71 2-84 4-80 (257)
77 PLN02253 xanthoxin dehydrogena 99.5 1.9E-13 4E-18 83.3 8.2 71 3-84 16-87 (280)
78 PRK12939 short chain dehydroge 99.5 2.8E-13 6.2E-18 81.0 8.8 70 6-84 7-77 (250)
79 TIGR01289 LPOR light-dependent 99.5 1.7E-13 3.6E-18 85.2 8.0 70 6-84 3-74 (314)
80 PRK06603 enoyl-(acyl carrier p 99.5 2.8E-13 6.1E-18 82.1 8.8 71 3-84 6-79 (260)
81 PRK07370 enoyl-(acyl carrier p 99.5 2.7E-13 5.8E-18 82.1 8.6 74 1-84 2-80 (258)
82 PRK06949 short chain dehydroge 99.5 3.3E-13 7.2E-18 81.2 8.9 72 3-84 7-79 (258)
83 PRK05599 hypothetical protein; 99.5 2.3E-13 5E-18 81.9 8.0 69 7-84 1-70 (246)
84 PRK07024 short chain dehydroge 99.5 1.8E-13 3.8E-18 82.6 7.4 69 6-84 2-71 (257)
85 PRK08063 enoyl-(acyl carrier p 99.5 3E-13 6.5E-18 81.0 8.3 72 3-84 2-75 (250)
86 PRK12826 3-ketoacyl-(acyl-carr 99.5 3.3E-13 7.2E-18 80.7 8.5 70 6-84 6-76 (251)
87 PRK06505 enoyl-(acyl carrier p 99.5 2.9E-13 6.3E-18 82.6 8.3 71 3-84 5-78 (271)
88 PRK06196 oxidoreductase; Provi 99.5 3.6E-13 7.8E-18 83.6 8.5 68 3-84 24-92 (315)
89 TIGR03206 benzo_BadH 2-hydroxy 99.5 4.6E-13 1E-17 80.1 8.6 70 6-84 3-73 (250)
90 PRK05565 fabG 3-ketoacyl-(acyl 99.5 4.8E-13 1E-17 79.8 8.6 73 1-83 1-75 (247)
91 PRK08226 short chain dehydroge 99.5 5.6E-13 1.2E-17 80.5 9.0 72 2-84 3-75 (263)
92 PRK08340 glucose-1-dehydrogena 99.5 3.3E-13 7.2E-18 81.5 8.0 67 8-84 2-69 (259)
93 PRK05786 fabG 3-ketoacyl-(acyl 99.5 5.4E-13 1.2E-17 79.4 8.8 73 1-84 1-74 (238)
94 PRK05717 oxidoreductase; Valid 99.5 2.9E-13 6.4E-18 81.5 7.6 70 2-84 7-77 (255)
95 PLN02780 ketoreductase/ oxidor 99.5 5E-13 1.1E-17 83.4 8.8 63 6-75 53-115 (320)
96 PRK08993 2-deoxy-D-gluconate 3 99.5 6.5E-13 1.4E-17 80.1 8.8 72 1-84 6-78 (253)
97 PRK07806 short chain dehydroge 99.5 8.1E-13 1.8E-17 79.1 9.1 72 3-84 4-77 (248)
98 PRK08690 enoyl-(acyl carrier p 99.5 6.2E-13 1.4E-17 80.6 8.6 71 3-84 4-77 (261)
99 KOG4169 15-hydroxyprostaglandi 99.5 2.5E-13 5.5E-18 80.8 6.6 76 1-85 1-77 (261)
100 PRK12937 short chain dehydroge 99.5 7.2E-13 1.6E-17 79.1 8.7 74 1-84 1-76 (245)
101 PRK05875 short chain dehydroge 99.5 7.3E-13 1.6E-17 80.5 8.8 75 1-83 3-78 (276)
102 PRK07326 short chain dehydroge 99.5 8.1E-13 1.7E-17 78.6 8.7 72 2-84 3-75 (237)
103 PRK08936 glucose-1-dehydrogena 99.5 9.6E-13 2.1E-17 79.5 8.9 73 2-84 4-78 (261)
104 PRK06128 oxidoreductase; Provi 99.5 9.3E-13 2E-17 81.2 8.9 72 3-84 53-127 (300)
105 PRK07102 short chain dehydroge 99.5 9.1E-13 2E-17 78.8 8.6 70 7-84 2-72 (243)
106 PRK12384 sorbitol-6-phosphate 99.5 1.1E-12 2.4E-17 79.0 9.0 72 6-84 2-74 (259)
107 PRK12828 short chain dehydroge 99.5 9.4E-13 2E-17 78.1 8.5 72 1-84 3-75 (239)
108 PRK07201 short chain dehydroge 99.5 7.5E-13 1.6E-17 88.5 8.9 72 3-84 369-441 (657)
109 PRK05855 short chain dehydroge 99.4 7.8E-13 1.7E-17 86.9 8.8 72 3-84 313-385 (582)
110 PRK07985 oxidoreductase; Provi 99.4 1E-12 2.2E-17 81.0 8.7 72 3-84 47-121 (294)
111 PRK12746 short chain dehydroge 99.4 1.1E-12 2.4E-17 78.8 8.5 72 3-84 4-77 (254)
112 PRK07856 short chain dehydroge 99.4 6.7E-13 1.4E-17 79.9 7.6 66 1-84 2-68 (252)
113 PRK06914 short chain dehydroge 99.4 1.1E-12 2.3E-17 79.9 8.6 70 6-83 3-73 (280)
114 PRK08159 enoyl-(acyl carrier p 99.4 1.1E-12 2.4E-17 80.1 8.5 71 3-84 8-81 (272)
115 PRK12743 oxidoreductase; Provi 99.4 1.1E-12 2.4E-17 79.1 8.5 70 6-84 2-73 (256)
116 PRK12748 3-ketoacyl-(acyl-carr 99.4 1.2E-12 2.6E-17 78.9 8.5 74 1-84 1-88 (256)
117 PRK06701 short chain dehydroge 99.4 1.5E-12 3.2E-17 80.2 9.1 73 2-84 43-117 (290)
118 PRK08642 fabG 3-ketoacyl-(acyl 99.4 8.2E-13 1.8E-17 79.2 7.7 71 1-84 1-73 (253)
119 PRK12744 short chain dehydroge 99.4 1.5E-12 3.2E-17 78.6 8.9 73 2-84 5-82 (257)
120 PRK05557 fabG 3-ketoacyl-(acyl 99.4 1.7E-12 3.7E-17 77.3 9.1 74 1-84 1-76 (248)
121 PRK12747 short chain dehydroge 99.4 1.2E-12 2.5E-17 78.7 8.4 70 6-84 4-75 (252)
122 PRK07831 short chain dehydroge 99.4 1.6E-12 3.5E-17 78.6 8.9 72 6-84 17-90 (262)
123 PRK05650 short chain dehydroge 99.4 1.3E-12 2.9E-17 79.3 8.3 69 7-84 1-70 (270)
124 PRK06940 short chain dehydroge 99.4 1.4E-12 2.9E-17 79.7 8.4 68 6-84 2-70 (275)
125 PRK06500 short chain dehydroge 99.4 1.6E-12 3.4E-17 77.8 8.5 70 2-84 3-73 (249)
126 TIGR02415 23BDH acetoin reduct 99.4 1.4E-12 3.1E-17 78.2 8.2 69 7-84 1-70 (254)
127 PRK07889 enoyl-(acyl carrier p 99.4 7.5E-13 1.6E-17 80.1 7.0 69 3-84 5-78 (256)
128 PRK09134 short chain dehydroge 99.4 2E-12 4.4E-17 78.0 8.9 70 6-84 9-80 (258)
129 PRK06484 short chain dehydroge 99.4 1.3E-12 2.7E-17 85.5 8.5 71 1-84 1-72 (520)
130 TIGR01963 PHB_DH 3-hydroxybuty 99.4 1.6E-12 3.5E-17 77.9 8.3 70 6-84 1-71 (255)
131 PRK07775 short chain dehydroge 99.4 1.9E-12 4.2E-17 78.9 8.7 70 6-84 10-80 (274)
132 PRK06398 aldose dehydrogenase; 99.4 1.2E-12 2.5E-17 79.3 7.5 62 2-84 3-65 (258)
133 TIGR01500 sepiapter_red sepiap 99.4 1.7E-12 3.6E-17 78.4 8.2 70 8-84 2-76 (256)
134 PRK06198 short chain dehydroge 99.4 2E-12 4.4E-17 77.9 8.4 72 3-84 4-77 (260)
135 KOG1200 Mitochondrial/plastidi 99.4 5.4E-13 1.2E-17 78.1 5.5 69 6-84 14-83 (256)
136 PRK09135 pteridine reductase; 99.4 3.5E-12 7.6E-17 76.2 9.1 73 3-84 4-78 (249)
137 PRK12745 3-ketoacyl-(acyl-carr 99.4 3.2E-12 6.9E-17 76.8 8.7 70 6-84 2-73 (256)
138 PRK12938 acetyacetyl-CoA reduc 99.4 2.7E-12 5.9E-17 76.8 8.4 70 6-84 3-74 (246)
139 PRK06181 short chain dehydroge 99.4 2.6E-12 5.6E-17 77.6 8.3 70 6-84 1-71 (263)
140 PRK12935 acetoacetyl-CoA reduc 99.4 3.5E-12 7.5E-17 76.4 8.6 72 3-84 4-77 (247)
141 PRK06101 short chain dehydroge 99.4 2.7E-12 5.9E-17 76.8 8.1 65 7-84 2-67 (240)
142 PRK06463 fabG 3-ketoacyl-(acyl 99.4 2.7E-12 5.8E-17 77.4 7.9 69 1-84 3-72 (255)
143 PRK06057 short chain dehydroge 99.4 2.3E-12 4.9E-17 77.7 7.6 67 3-84 5-72 (255)
144 PRK07832 short chain dehydroge 99.4 3.3E-12 7.2E-17 77.7 8.2 70 7-84 1-71 (272)
145 PRK06123 short chain dehydroge 99.4 4E-12 8.7E-17 76.1 8.4 70 6-84 2-73 (248)
146 PRK06483 dihydromonapterin red 99.4 2.8E-12 6.2E-17 76.4 7.6 65 6-84 2-67 (236)
147 PRK08267 short chain dehydroge 99.4 3.5E-12 7.6E-17 77.0 7.8 66 7-83 2-68 (260)
148 PRK06841 short chain dehydroge 99.4 4.1E-12 8.9E-17 76.4 8.1 70 2-84 12-82 (255)
149 PRK06947 glucose-1-dehydrogena 99.4 5.7E-12 1.2E-16 75.5 8.6 70 6-84 2-73 (248)
150 PRK06182 short chain dehydroge 99.4 3.1E-12 6.8E-17 77.8 7.3 64 6-84 3-67 (273)
151 PRK06171 sorbitol-6-phosphate 99.4 2.5E-12 5.5E-17 77.8 6.8 65 1-84 5-70 (266)
152 PRK09291 short chain dehydroge 99.4 6.9E-12 1.5E-16 75.4 8.7 69 6-83 2-71 (257)
153 PRK12859 3-ketoacyl-(acyl-carr 99.4 5.9E-12 1.3E-16 76.0 8.4 72 3-84 4-89 (256)
154 PRK12829 short chain dehydroge 99.4 5.4E-12 1.2E-16 76.1 8.2 70 3-84 9-79 (264)
155 PRK06077 fabG 3-ketoacyl-(acyl 99.4 8.5E-12 1.8E-16 74.8 9.0 74 1-84 2-77 (252)
156 PRK06484 short chain dehydroge 99.4 4.2E-12 9.2E-17 83.1 8.3 67 6-84 269-336 (520)
157 PRK12936 3-ketoacyl-(acyl-carr 99.4 7.1E-12 1.5E-16 74.7 8.6 71 1-84 2-73 (245)
158 TIGR02632 RhaD_aldol-ADH rhamn 99.4 5.8E-12 1.3E-16 85.1 9.1 74 3-84 412-486 (676)
159 PRK08264 short chain dehydroge 99.4 5.3E-12 1.2E-16 75.2 8.0 67 1-84 2-70 (238)
160 PRK06997 enoyl-(acyl carrier p 99.4 6.1E-12 1.3E-16 76.3 8.3 71 3-84 4-77 (260)
161 PRK05993 short chain dehydroge 99.4 4.4E-12 9.4E-17 77.4 7.7 64 6-84 4-68 (277)
162 PRK08263 short chain dehydroge 99.4 4.4E-12 9.6E-17 77.2 7.6 67 6-84 3-70 (275)
163 PRK07074 short chain dehydroge 99.4 7E-12 1.5E-16 75.5 8.3 68 6-84 2-70 (257)
164 PRK06180 short chain dehydroge 99.4 4.1E-12 8.8E-17 77.5 7.3 67 6-84 4-71 (277)
165 TIGR01829 AcAcCoA_reduct aceto 99.4 9.3E-12 2E-16 74.1 8.5 69 7-84 1-71 (242)
166 PRK08703 short chain dehydroge 99.4 7.8E-12 1.7E-16 74.7 8.1 72 3-83 4-78 (239)
167 PRK12827 short chain dehydroge 99.3 1.1E-11 2.3E-16 74.1 8.3 72 3-84 4-80 (249)
168 PRK08220 2,3-dihydroxybenzoate 99.3 8.8E-12 1.9E-16 74.8 7.7 65 1-84 4-69 (252)
169 PRK10538 malonic semialdehyde 99.3 9.4E-12 2E-16 74.8 7.8 66 7-84 1-67 (248)
170 PRK09730 putative NAD(P)-bindi 99.3 1.1E-11 2.4E-16 74.0 7.9 69 7-84 2-72 (247)
171 PLN00015 protochlorophyllide r 99.3 4.8E-12 1E-16 78.4 6.4 66 10-84 1-68 (308)
172 PRK06924 short chain dehydroge 99.3 6.1E-12 1.3E-16 75.5 6.7 66 7-84 2-69 (251)
173 PRK07060 short chain dehydroge 99.3 1.6E-11 3.5E-16 73.3 8.4 67 2-83 6-73 (245)
174 PRK06482 short chain dehydroge 99.3 9.4E-12 2E-16 75.7 7.5 67 6-84 2-69 (276)
175 PRK06179 short chain dehydroge 99.3 4.9E-12 1.1E-16 76.7 6.2 62 6-84 4-66 (270)
176 PRK06523 short chain dehydroge 99.3 9.5E-12 2.1E-16 75.0 7.3 64 2-84 6-70 (260)
177 PRK05884 short chain dehydroge 99.3 1.2E-11 2.5E-16 73.6 7.3 63 8-84 2-65 (223)
178 PRK08945 putative oxoacyl-(acy 99.3 2.4E-11 5.3E-16 72.8 8.2 70 6-83 12-84 (247)
179 TIGR01831 fabG_rel 3-oxoacyl-( 99.3 1.9E-11 4E-16 72.9 7.5 67 9-84 1-69 (239)
180 PLN03209 translocon at the inn 99.3 5.5E-11 1.2E-15 78.9 10.1 79 5-83 79-158 (576)
181 COG1028 FabG Dehydrogenases wi 99.3 5.6E-11 1.2E-15 71.3 9.2 75 1-84 1-79 (251)
182 PRK07069 short chain dehydroge 99.3 3.7E-11 8E-16 72.0 8.3 69 9-84 2-72 (251)
183 PRK08177 short chain dehydroge 99.3 2.5E-11 5.5E-16 72.0 7.5 64 7-84 2-66 (225)
184 PRK12825 fabG 3-ketoacyl-(acyl 99.3 4.6E-11 1E-15 71.1 8.6 70 6-84 6-77 (249)
185 PLN02730 enoyl-[acyl-carrier-p 99.3 2.1E-11 4.5E-16 75.8 7.2 49 1-51 5-55 (303)
186 TIGR02685 pter_reduc_Leis pter 99.3 3.2E-11 6.9E-16 73.2 7.7 64 7-78 2-66 (267)
187 PRK08324 short chain dehydroge 99.3 3.6E-11 7.7E-16 81.3 8.6 69 6-84 422-491 (681)
188 KOG1502 Flavonol reductase/cin 99.3 3.2E-11 7E-16 75.2 7.5 70 6-84 6-78 (327)
189 PRK05693 short chain dehydroge 99.3 2.9E-11 6.3E-16 73.6 7.0 63 7-84 2-65 (274)
190 PRK07041 short chain dehydroge 99.3 3.9E-11 8.6E-16 71.2 7.3 65 10-84 1-66 (230)
191 PRK12742 oxidoreductase; Provi 99.3 6.3E-11 1.4E-15 70.5 8.1 66 3-83 4-71 (237)
192 TIGR02622 CDP_4_6_dhtase CDP-g 99.2 9.1E-11 2E-15 73.7 9.0 69 6-84 4-73 (349)
193 PRK12824 acetoacetyl-CoA reduc 99.2 6.6E-11 1.4E-15 70.6 7.9 70 6-84 2-73 (245)
194 PLN02989 cinnamyl-alcohol dehy 99.2 9.7E-11 2.1E-15 72.8 8.8 71 6-83 5-76 (325)
195 PRK07424 bifunctional sterol d 99.2 6.2E-11 1.3E-15 76.2 8.0 69 2-83 175-244 (406)
196 PLN02986 cinnamyl-alcohol dehy 99.2 1.2E-10 2.5E-15 72.4 8.9 75 1-83 1-76 (322)
197 PF08659 KR: KR domain; Inter 99.2 2.6E-10 5.6E-15 66.2 9.4 69 8-85 2-75 (181)
198 TIGR01830 3oxo_ACP_reduc 3-oxo 99.2 1.1E-10 2.4E-15 69.4 7.9 67 9-84 1-69 (239)
199 PLN02583 cinnamoyl-CoA reducta 99.2 1.2E-10 2.6E-15 71.9 8.1 69 6-83 6-77 (297)
200 TIGR03589 PseB UDP-N-acetylglu 99.2 1.2E-10 2.6E-15 72.8 8.2 69 3-83 2-73 (324)
201 PLN02240 UDP-glucose 4-epimera 99.2 3.4E-10 7.3E-15 70.9 9.7 77 1-83 1-78 (352)
202 PLN02650 dihydroflavonol-4-red 99.2 2.2E-10 4.7E-15 72.0 8.8 75 1-83 1-76 (351)
203 KOG1199 Short-chain alcohol de 99.2 1E-10 2.2E-15 67.7 6.4 66 6-83 9-75 (260)
204 PRK08017 oxidoreductase; Provi 99.2 1.5E-10 3.2E-15 69.6 7.4 64 6-84 2-66 (256)
205 PRK07023 short chain dehydroge 99.2 1.9E-10 4E-15 68.9 7.5 63 7-83 2-65 (243)
206 PRK06953 short chain dehydroge 99.2 1.9E-10 4.2E-15 68.1 7.5 62 7-83 2-64 (222)
207 PLN02896 cinnamyl-alcohol dehy 99.2 2.5E-10 5.5E-15 71.8 8.3 68 6-83 10-78 (353)
208 PRK12367 short chain dehydroge 99.2 1.6E-10 3.6E-15 69.8 7.1 65 3-82 12-77 (245)
209 KOG1610 Corticosteroid 11-beta 99.2 2.1E-10 4.6E-15 71.0 7.5 68 6-84 29-97 (322)
210 PLN02662 cinnamyl-alcohol dehy 99.2 3E-10 6.4E-15 70.4 7.9 71 6-83 4-75 (322)
211 PRK08219 short chain dehydroge 99.2 3.2E-10 6.8E-15 67.0 7.6 65 6-84 3-68 (227)
212 COG1086 Predicted nucleoside-d 99.1 4.1E-10 8.9E-15 74.2 8.6 74 3-84 248-323 (588)
213 PLN02653 GDP-mannose 4,6-dehyd 99.1 2.3E-10 5.1E-15 71.6 7.2 76 3-84 4-81 (340)
214 KOG1478 3-keto sterol reductas 99.1 3.5E-10 7.7E-15 68.7 7.2 74 6-84 3-82 (341)
215 TIGR01472 gmd GDP-mannose 4,6- 99.1 3.8E-10 8.3E-15 70.7 7.6 73 7-84 1-76 (343)
216 PRK08309 short chain dehydroge 99.1 6.5E-10 1.4E-14 64.5 8.0 67 7-84 1-68 (177)
217 PRK08261 fabG 3-ketoacyl-(acyl 99.1 3.9E-10 8.5E-15 73.0 7.5 65 6-84 210-277 (450)
218 KOG1210 Predicted 3-ketosphing 99.1 4.6E-10 9.9E-15 69.6 7.4 72 6-84 33-105 (331)
219 PLN02686 cinnamoyl-CoA reducta 99.1 8.9E-10 1.9E-14 70.0 8.9 75 6-84 53-128 (367)
220 PRK07577 short chain dehydroge 99.1 5.3E-10 1.1E-14 66.4 7.4 59 6-84 3-62 (234)
221 PRK13656 trans-2-enoyl-CoA red 99.1 7E-10 1.5E-14 70.8 8.2 69 6-84 41-124 (398)
222 PLN00198 anthocyanidin reducta 99.1 1.2E-09 2.5E-14 68.4 8.7 72 3-83 7-79 (338)
223 smart00822 PKS_KR This enzymat 99.1 8.3E-10 1.8E-14 62.4 7.4 69 7-84 1-74 (180)
224 PLN02214 cinnamoyl-CoA reducta 99.1 1.3E-09 2.8E-14 68.6 8.7 69 6-83 10-80 (342)
225 PLN02572 UDP-sulfoquinovose sy 99.1 1.7E-09 3.6E-14 70.3 9.3 73 6-83 47-133 (442)
226 PRK15181 Vi polysaccharide bio 99.1 2.1E-09 4.5E-14 67.7 9.2 76 3-83 13-89 (348)
227 PF13561 adh_short_C2: Enoyl-( 99.1 8.9E-10 1.9E-14 66.0 7.1 62 13-84 1-65 (241)
228 PRK06550 fabG 3-ketoacyl-(acyl 99.1 5.8E-10 1.3E-14 66.3 6.0 40 1-41 1-40 (235)
229 KOG1207 Diacetyl reductase/L-x 99.1 7.4E-10 1.6E-14 64.2 6.1 67 3-82 5-72 (245)
230 KOG1371 UDP-glucose 4-epimeras 99.1 1.8E-09 3.9E-14 67.3 8.1 73 6-84 2-75 (343)
231 KOG1611 Predicted short chain- 99.0 1.2E-09 2.6E-14 65.2 6.8 71 6-85 3-76 (249)
232 PLN02657 3,8-divinyl protochlo 99.0 2.4E-09 5.3E-14 68.6 8.0 69 6-83 60-131 (390)
233 PF13460 NAD_binding_10: NADH( 99.0 5.1E-09 1.1E-13 60.3 8.5 58 9-83 1-59 (183)
234 TIGR02813 omega_3_PfaA polyket 99.0 3E-09 6.5E-14 79.7 8.5 35 5-39 1996-2031(2582)
235 COG0623 FabI Enoyl-[acyl-carri 99.0 7.4E-09 1.6E-13 62.1 8.3 73 2-85 3-78 (259)
236 CHL00194 ycf39 Ycf39; Provisio 99.0 4.4E-09 9.5E-14 65.5 7.3 61 8-83 2-63 (317)
237 KOG1209 1-Acyl dihydroxyaceton 99.0 4.4E-09 9.5E-14 62.7 6.8 65 6-84 7-73 (289)
238 PRK09009 C factor cell-cell si 98.9 5.8E-09 1.3E-13 62.1 7.2 60 7-83 1-63 (235)
239 PRK10675 UDP-galactose-4-epime 98.9 1.4E-08 3.1E-13 63.4 8.8 68 8-83 2-70 (338)
240 PF02719 Polysacc_synt_2: Poly 98.9 4.3E-09 9.3E-14 65.1 6.3 72 9-83 1-74 (293)
241 PLN02427 UDP-apiose/xylose syn 98.9 8.7E-09 1.9E-13 65.6 6.9 70 6-83 14-85 (386)
242 PRK12548 shikimate 5-dehydroge 98.9 2.4E-08 5.1E-13 61.9 8.0 69 3-82 124-197 (289)
243 PRK06300 enoyl-(acyl carrier p 98.9 4.3E-09 9.3E-14 65.4 4.6 37 2-39 5-43 (299)
244 COG1087 GalE UDP-glucose 4-epi 98.9 2E-08 4.4E-13 62.3 7.2 64 7-84 1-65 (329)
245 TIGR03466 HpnA hopanoid-associ 98.8 8.6E-09 1.9E-13 63.8 5.6 62 7-83 1-63 (328)
246 PLN00141 Tic62-NAD(P)-related 98.8 2.3E-08 5E-13 60.4 7.3 60 6-78 17-77 (251)
247 cd01078 NAD_bind_H4MPT_DH NADP 98.8 7.7E-08 1.7E-12 56.3 9.1 70 2-82 25-95 (194)
248 PRK10217 dTDP-glucose 4,6-dehy 98.8 2.9E-08 6.3E-13 62.4 6.7 68 7-83 2-71 (355)
249 PRK07578 short chain dehydroge 98.8 3.9E-08 8.5E-13 57.4 6.7 32 8-40 2-33 (199)
250 PF01370 Epimerase: NAD depend 98.8 1.3E-07 2.9E-12 56.0 8.7 61 9-83 1-62 (236)
251 TIGR01181 dTDP_gluc_dehyt dTDP 98.8 5.1E-08 1.1E-12 60.0 7.0 66 8-84 1-71 (317)
252 TIGR01179 galE UDP-glucose-4-e 98.7 6.9E-08 1.5E-12 59.6 7.1 65 9-83 2-67 (328)
253 PF01073 3Beta_HSD: 3-beta hyd 98.7 3.9E-08 8.6E-13 60.6 5.3 63 10-84 1-66 (280)
254 PLN02695 GDP-D-mannose-3',5'-e 98.7 9.8E-08 2.1E-12 60.8 6.7 62 6-82 21-83 (370)
255 PRK10084 dTDP-glucose 4,6 dehy 98.7 1.9E-07 4.1E-12 58.7 7.4 65 8-83 2-70 (352)
256 COG0451 WcaG Nucleoside-diphos 98.6 1.4E-07 3.1E-12 58.0 5.9 59 8-82 2-61 (314)
257 PRK11908 NAD-dependent epimera 98.6 1.9E-07 4E-12 58.8 6.3 62 7-82 2-66 (347)
258 PF05368 NmrA: NmrA-like famil 98.6 6.1E-07 1.3E-11 53.6 8.1 63 9-84 1-64 (233)
259 TIGR03649 ergot_EASG ergot alk 98.6 1.3E-07 2.9E-12 57.9 5.0 56 9-82 2-58 (285)
260 PRK08125 bifunctional UDP-gluc 98.6 2.5E-07 5.4E-12 62.8 6.2 58 6-77 315-373 (660)
261 TIGR01746 Thioester-redct thio 98.6 5E-07 1.1E-11 56.5 7.1 68 8-76 1-73 (367)
262 COG0702 Predicted nucleoside-d 98.5 5.7E-07 1.2E-11 54.4 6.9 60 8-83 2-62 (275)
263 PLN02260 probable rhamnose bio 98.5 1.1E-06 2.3E-11 59.7 7.6 68 6-82 6-76 (668)
264 PLN02206 UDP-glucuronate decar 98.5 9E-07 1.9E-11 57.8 6.9 35 6-40 119-153 (442)
265 COG1089 Gmd GDP-D-mannose dehy 98.4 7.7E-07 1.7E-11 55.2 5.4 74 6-84 2-76 (345)
266 COG1088 RfbB dTDP-D-glucose 4, 98.4 1.1E-06 2.5E-11 54.6 6.1 67 7-84 1-72 (340)
267 PRK05865 hypothetical protein; 98.4 1.8E-06 3.9E-11 60.2 7.5 58 8-83 2-60 (854)
268 PLN02166 dTDP-glucose 4,6-dehy 98.4 2.1E-06 4.6E-11 56.0 7.1 35 6-40 120-154 (436)
269 PLN02503 fatty acyl-CoA reduct 98.4 6.1E-06 1.3E-10 55.8 9.3 71 6-76 119-204 (605)
270 KOG1430 C-3 sterol dehydrogena 98.3 1.9E-06 4E-11 55.0 5.9 69 6-83 4-75 (361)
271 COG1748 LYS9 Saccharopine dehy 98.3 3E-06 6.5E-11 54.5 6.8 65 7-84 2-68 (389)
272 PRK14106 murD UDP-N-acetylmura 98.3 5.3E-06 1.1E-10 54.0 7.3 48 1-50 1-49 (450)
273 PRK09987 dTDP-4-dehydrorhamnos 98.3 2.2E-06 4.8E-11 53.1 5.3 31 8-39 2-32 (299)
274 PRK07201 short chain dehydroge 98.3 8.8E-06 1.9E-10 55.0 8.1 60 8-76 2-63 (657)
275 PRK12320 hypothetical protein; 98.2 5.8E-06 1.2E-10 56.7 7.0 51 8-76 2-52 (699)
276 PRK05579 bifunctional phosphop 98.2 6E-06 1.3E-10 53.4 6.4 37 3-40 186-238 (399)
277 PLN02778 3,5-epimerase/4-reduc 98.2 1.1E-05 2.3E-10 50.2 7.4 47 6-52 9-55 (298)
278 KOG1429 dTDP-glucose 4-6-dehyd 98.2 4.9E-06 1.1E-10 51.7 5.7 36 6-41 27-62 (350)
279 PLN00016 RNA-binding protein; 98.2 4.3E-06 9.3E-11 53.4 5.6 37 6-42 52-92 (378)
280 PRK11150 rfaD ADP-L-glycero-D- 98.2 2.3E-06 5.1E-11 52.9 4.2 31 9-39 2-32 (308)
281 KOG1372 GDP-mannose 4,6 dehydr 98.1 1.9E-05 4.1E-10 48.5 6.9 77 6-85 28-105 (376)
282 PF01488 Shikimate_DH: Shikima 98.1 1.5E-05 3.3E-10 44.3 6.1 47 2-50 9-56 (135)
283 TIGR01777 yfcH conserved hypot 98.1 4.1E-06 9E-11 51.1 4.1 34 9-42 1-34 (292)
284 TIGR01214 rmlD dTDP-4-dehydror 98.1 1.2E-05 2.6E-10 49.2 6.1 31 9-39 2-32 (287)
285 PF07993 NAD_binding_4: Male s 98.1 4.3E-06 9.2E-11 50.6 4.0 67 11-77 1-73 (249)
286 PLN02996 fatty acyl-CoA reduct 98.1 3.9E-05 8.4E-10 50.9 8.7 36 6-41 11-49 (491)
287 PF03435 Saccharop_dh: Sacchar 98.1 2.4E-05 5.2E-10 50.1 7.3 64 9-84 1-67 (386)
288 PRK02472 murD UDP-N-acetylmura 98.1 1.2E-05 2.5E-10 52.4 5.9 50 1-52 1-50 (447)
289 PRK14982 acyl-ACP reductase; P 98.1 1.6E-05 3.6E-10 50.5 5.9 48 2-50 152-201 (340)
290 PLN02520 bifunctional 3-dehydr 98.0 3.5E-05 7.5E-10 51.6 6.2 46 3-50 377-422 (529)
291 COG4982 3-oxoacyl-[acyl-carrie 98.0 0.00013 2.8E-09 49.8 8.6 75 6-85 396-473 (866)
292 PRK00258 aroE shikimate 5-dehy 97.9 5.2E-05 1.1E-09 46.9 6.3 47 3-51 121-168 (278)
293 PRK09620 hypothetical protein; 97.9 4.4E-05 9.4E-10 46.1 5.3 35 3-38 1-51 (229)
294 TIGR02197 heptose_epim ADP-L-g 97.9 6.8E-05 1.5E-09 46.3 6.3 32 9-40 1-33 (314)
295 COG1090 Predicted nucleoside-d 97.9 2.6E-05 5.7E-10 48.2 4.2 37 9-45 1-37 (297)
296 cd01075 NAD_bind_Leu_Phe_Val_D 97.9 8.4E-05 1.8E-09 44.0 5.9 46 2-49 25-70 (200)
297 KOG2865 NADH:ubiquinone oxidor 97.9 5.7E-05 1.2E-09 47.3 5.3 68 6-83 61-129 (391)
298 TIGR00507 aroE shikimate 5-deh 97.8 0.00014 3.1E-09 44.7 6.3 45 6-51 117-161 (270)
299 COG3320 Putative dehydrogenase 97.8 0.00017 3.8E-09 46.3 6.6 68 7-76 1-72 (382)
300 PLN02725 GDP-4-keto-6-deoxyman 97.7 5.8E-05 1.3E-09 46.5 4.1 29 10-38 1-29 (306)
301 PF02254 TrkA_N: TrkA-N domain 97.7 0.00034 7.3E-09 37.5 6.6 57 9-81 1-58 (116)
302 TIGR00521 coaBC_dfp phosphopan 97.7 0.0001 2.3E-09 47.7 5.1 36 3-39 183-234 (390)
303 PF04321 RmlD_sub_bind: RmlD s 97.7 0.00043 9.3E-09 42.9 7.6 62 7-77 1-65 (286)
304 COG0569 TrkA K+ transport syst 97.7 0.00036 7.9E-09 42.0 7.0 59 8-81 2-62 (225)
305 PRK12475 thiamine/molybdopteri 97.7 0.00078 1.7E-08 42.9 8.6 63 3-74 22-106 (338)
306 PRK04148 hypothetical protein; 97.6 0.00022 4.8E-09 39.8 5.2 55 6-77 17-71 (134)
307 cd01065 NAD_bind_Shikimate_DH 97.6 0.00043 9.4E-09 38.9 6.4 45 6-51 19-64 (155)
308 COG2910 Putative NADH-flavin r 97.6 0.00017 3.7E-09 42.4 4.8 54 8-78 2-55 (211)
309 KOG2733 Uncharacterized membra 97.6 0.00033 7.2E-09 45.0 6.1 72 8-84 7-83 (423)
310 TIGR03443 alpha_am_amid L-amin 97.6 0.00056 1.2E-08 49.9 8.1 69 6-76 971-1046(1389)
311 PRK09496 trkA potassium transp 97.6 0.00056 1.2E-08 44.6 7.0 59 8-81 2-61 (453)
312 PRK09310 aroDE bifunctional 3- 97.5 0.00051 1.1E-08 45.6 6.3 45 3-49 330-374 (477)
313 PRK12549 shikimate 5-dehydroge 97.5 0.0014 2.9E-08 40.9 7.5 47 6-53 127-174 (284)
314 TIGR02114 coaB_strep phosphopa 97.4 0.00033 7.2E-09 42.3 4.2 29 10-38 18-47 (227)
315 TIGR02356 adenyl_thiF thiazole 97.4 0.0027 5.9E-08 37.6 7.7 35 3-39 19-54 (202)
316 PLN02260 probable rhamnose bio 97.3 0.0016 3.5E-08 44.6 7.3 29 6-34 380-408 (668)
317 PRK07688 thiamine/molybdopteri 97.3 0.0046 1E-07 39.5 8.7 35 3-39 22-57 (339)
318 KOG1221 Acyl-CoA reductase [Li 97.3 0.0018 3.9E-08 42.9 6.9 67 6-77 12-92 (467)
319 cd05212 NAD_bind_m-THF_DH_Cycl 97.3 0.0028 6E-08 35.7 6.5 43 2-45 25-67 (140)
320 PRK09496 trkA potassium transp 97.2 0.0032 6.9E-08 41.1 7.6 59 6-78 231-289 (453)
321 cd01080 NAD_bind_m-THF_DH_Cycl 97.2 0.0024 5.1E-08 37.0 6.2 42 2-44 41-82 (168)
322 PRK10669 putative cation:proto 97.2 0.0014 3.1E-08 44.1 6.0 56 7-78 418-473 (558)
323 TIGR01915 npdG NADPH-dependent 97.2 0.0022 4.7E-08 38.4 6.2 42 8-49 2-43 (219)
324 PRK06849 hypothetical protein; 97.2 0.0024 5.2E-08 41.2 6.6 36 6-41 4-39 (389)
325 PF12076 Wax2_C: WAX2 C-termin 97.1 0.002 4.4E-08 36.9 5.2 43 9-53 1-43 (164)
326 TIGR02853 spore_dpaA dipicolin 97.1 0.0024 5.3E-08 39.8 6.0 40 3-44 149-188 (287)
327 cd08295 double_bond_reductase_ 97.1 0.0022 4.8E-08 40.3 5.9 43 5-47 151-193 (338)
328 PF04127 DFP: DNA / pantothena 97.1 0.011 2.4E-07 34.8 8.4 34 6-39 3-52 (185)
329 TIGR01809 Shik-DH-AROM shikima 97.1 0.0032 7E-08 39.1 6.4 47 3-51 123-170 (282)
330 COG0169 AroE Shikimate 5-dehyd 97.1 0.0038 8.3E-08 39.0 6.3 48 6-54 126-174 (283)
331 TIGR02825 B4_12hDH leukotriene 97.0 0.0031 6.6E-08 39.4 5.9 42 5-46 138-179 (325)
332 PRK14175 bifunctional 5,10-met 97.0 0.0048 1E-07 38.6 6.6 40 2-42 155-194 (286)
333 KOG1203 Predicted dehydrogenas 97.0 0.002 4.4E-08 42.1 5.0 43 6-48 79-121 (411)
334 PF02737 3HCDH_N: 3-hydroxyacy 97.0 0.0048 1.1E-07 36.0 6.2 43 9-52 2-44 (180)
335 PLN03154 putative allyl alcoho 97.0 0.0031 6.8E-08 40.0 5.8 42 5-46 158-199 (348)
336 cd08293 PTGR2 Prostaglandin re 97.0 0.0032 7E-08 39.5 5.8 41 7-47 156-197 (345)
337 cd05276 p53_inducible_oxidored 97.0 0.0039 8.4E-08 38.2 5.9 39 5-43 139-177 (323)
338 PRK14194 bifunctional 5,10-met 97.0 0.0049 1.1E-07 38.9 6.2 43 2-45 156-198 (301)
339 cd08294 leukotriene_B4_DH_like 97.0 0.0042 9E-08 38.6 6.0 41 5-45 143-183 (329)
340 PRK14027 quinate/shikimate deh 97.0 0.0051 1.1E-07 38.4 6.3 45 6-51 127-172 (283)
341 cd00757 ThiF_MoeB_HesA_family 97.0 0.014 3.1E-07 35.2 8.0 63 3-74 19-101 (228)
342 PF00670 AdoHcyase_NAD: S-aden 96.9 0.0049 1.1E-07 35.5 5.6 39 2-42 20-58 (162)
343 COG1064 AdhP Zn-dependent alco 96.9 0.005 1.1E-07 39.4 6.1 44 4-48 165-208 (339)
344 PRK05690 molybdopterin biosynt 96.9 0.023 5E-07 34.8 8.8 35 3-39 30-65 (245)
345 PRK04308 murD UDP-N-acetylmura 96.9 0.0036 7.9E-08 41.0 5.7 39 1-41 1-39 (445)
346 cd08259 Zn_ADH5 Alcohol dehydr 96.9 0.005 1.1E-07 38.2 6.0 40 5-44 162-201 (332)
347 COG0604 Qor NADPH:quinone redu 96.9 0.0045 9.8E-08 39.3 5.8 42 3-44 140-181 (326)
348 PRK08762 molybdopterin biosynt 96.9 0.013 2.9E-07 37.8 8.0 50 6-56 135-204 (376)
349 cd08253 zeta_crystallin Zeta-c 96.9 0.0052 1.1E-07 37.7 6.0 41 5-45 144-184 (325)
350 PF00899 ThiF: ThiF family; I 96.9 0.024 5.3E-07 31.3 8.9 61 6-74 2-82 (135)
351 PRK06732 phosphopantothenate-- 96.9 0.0023 5.1E-08 38.7 4.3 32 8-39 17-49 (229)
352 PF02826 2-Hacid_dh_C: D-isome 96.9 0.0062 1.3E-07 35.4 5.8 39 3-43 34-72 (178)
353 KOG1204 Predicted dehydrogenas 96.9 0.00011 2.5E-09 44.4 -1.5 30 1-30 1-30 (253)
354 cd08266 Zn_ADH_like1 Alcohol d 96.9 0.0071 1.5E-07 37.4 6.4 40 5-44 166-205 (342)
355 PF12847 Methyltransf_18: Meth 96.8 0.022 4.7E-07 30.0 7.7 59 5-73 1-61 (112)
356 PF02882 THF_DHG_CYH_C: Tetrah 96.8 0.0057 1.2E-07 35.2 5.4 43 2-45 33-75 (160)
357 PRK08655 prephenate dehydrogen 96.8 0.0053 1.1E-07 40.5 5.8 39 8-46 2-40 (437)
358 PF03807 F420_oxidored: NADP o 96.8 0.0081 1.8E-07 31.1 5.4 37 14-50 6-46 (96)
359 PRK06719 precorrin-2 dehydroge 96.8 0.0068 1.5E-07 34.7 5.4 34 2-37 10-43 (157)
360 PF12242 Eno-Rase_NADH_b: NAD( 96.8 0.0057 1.2E-07 30.9 4.3 33 7-39 40-73 (78)
361 PRK12428 3-alpha-hydroxysteroi 96.8 0.0018 3.9E-08 38.9 3.1 43 22-84 1-44 (241)
362 TIGR01470 cysG_Nterm siroheme 96.7 0.019 4.2E-07 34.2 7.3 37 2-40 6-42 (205)
363 PRK03659 glutathione-regulated 96.7 0.0073 1.6E-07 41.3 6.1 58 7-80 401-459 (601)
364 TIGR02355 moeB molybdopterin s 96.7 0.032 7E-07 34.0 8.3 50 6-56 24-93 (240)
365 PRK08644 thiamine biosynthesis 96.7 0.024 5.3E-07 33.9 7.6 33 6-39 28-61 (212)
366 cd00401 AdoHcyase S-adenosyl-L 96.7 0.0094 2E-07 39.1 6.2 39 6-45 202-240 (413)
367 PRK14191 bifunctional 5,10-met 96.7 0.013 2.8E-07 36.7 6.6 39 2-41 154-192 (285)
368 TIGR00518 alaDH alanine dehydr 96.7 0.025 5.4E-07 36.6 8.0 41 6-47 167-207 (370)
369 PF13241 NAD_binding_7: Putati 96.7 0.0034 7.3E-08 33.3 3.5 37 2-40 4-40 (103)
370 TIGR01035 hemA glutamyl-tRNA r 96.7 0.0082 1.8E-07 39.3 5.9 44 3-48 178-222 (417)
371 PRK13940 glutamyl-tRNA reducta 96.7 0.0089 1.9E-07 39.2 6.0 46 3-50 179-225 (414)
372 TIGR02354 thiF_fam2 thiamine b 96.7 0.034 7.4E-07 33.0 8.0 33 6-39 21-54 (200)
373 PRK06718 precorrin-2 dehydroge 96.7 0.0058 1.3E-07 36.3 4.8 36 2-39 7-42 (202)
374 PRK05476 S-adenosyl-L-homocyst 96.7 0.011 2.3E-07 39.0 6.3 39 3-43 210-248 (425)
375 PRK08223 hypothetical protein; 96.7 0.024 5.2E-07 35.6 7.6 61 6-74 27-107 (287)
376 PRK14189 bifunctional 5,10-met 96.7 0.012 2.6E-07 36.9 6.2 42 2-44 155-196 (285)
377 PRK05597 molybdopterin biosynt 96.6 0.033 7.2E-07 35.8 8.2 63 3-74 26-108 (355)
378 PRK10792 bifunctional 5,10-met 96.6 0.015 3.3E-07 36.4 6.4 43 2-45 156-198 (285)
379 cd08268 MDR2 Medium chain dehy 96.6 0.011 2.3E-07 36.4 5.8 39 6-44 145-183 (328)
380 PRK05600 thiamine biosynthesis 96.6 0.04 8.7E-07 35.7 8.5 63 3-74 39-121 (370)
381 PRK00045 hemA glutamyl-tRNA re 96.6 0.011 2.3E-07 38.8 6.0 45 3-49 180-225 (423)
382 COG2085 Predicted dinucleotide 96.6 0.011 2.3E-07 35.5 5.4 42 9-50 3-45 (211)
383 PRK07819 3-hydroxybutyryl-CoA 96.6 0.022 4.7E-07 35.6 6.9 43 7-50 6-48 (286)
384 PRK06129 3-hydroxyacyl-CoA deh 96.6 0.017 3.7E-07 36.3 6.5 40 8-48 4-43 (308)
385 PRK03562 glutathione-regulated 96.6 0.012 2.6E-07 40.4 6.2 56 7-78 401-456 (621)
386 KOG1202 Animal-type fatty acid 96.5 0.02 4.3E-07 42.6 7.3 70 5-83 1767-1841(2376)
387 PRK14188 bifunctional 5,10-met 96.5 0.016 3.5E-07 36.5 6.3 38 2-40 155-193 (296)
388 TIGR00715 precor6x_red precorr 96.5 0.0096 2.1E-07 36.7 5.1 34 8-42 2-35 (256)
389 PRK12550 shikimate 5-dehydroge 96.5 0.013 2.8E-07 36.4 5.6 44 6-50 122-166 (272)
390 PLN02494 adenosylhomocysteinas 96.5 0.016 3.4E-07 38.8 6.2 38 3-42 252-289 (477)
391 TIGR02824 quinone_pig3 putativ 96.5 0.015 3.3E-07 35.6 6.0 39 5-43 139-177 (325)
392 PRK07530 3-hydroxybutyryl-CoA 96.5 0.024 5.1E-07 35.3 6.8 41 7-48 5-45 (292)
393 PRK08306 dipicolinate synthase 96.5 0.018 3.8E-07 36.2 6.2 37 6-43 152-188 (296)
394 cd01487 E1_ThiF_like E1_ThiF_l 96.5 0.05 1.1E-06 31.6 7.7 31 9-40 2-33 (174)
395 PRK14183 bifunctional 5,10-met 96.5 0.02 4.2E-07 35.9 6.2 42 2-44 154-195 (281)
396 PRK14176 bifunctional 5,10-met 96.5 0.021 4.5E-07 35.8 6.3 43 2-45 161-203 (287)
397 PRK06035 3-hydroxyacyl-CoA deh 96.4 0.023 4.9E-07 35.4 6.5 40 8-48 5-44 (291)
398 PRK14173 bifunctional 5,10-met 96.4 0.021 4.5E-07 35.8 6.3 42 2-44 152-193 (287)
399 PTZ00075 Adenosylhomocysteinas 96.4 0.017 3.6E-07 38.6 6.1 39 2-42 251-289 (476)
400 TIGR03840 TMPT_Se_Te thiopurin 96.4 0.016 3.4E-07 34.8 5.5 68 6-76 35-106 (213)
401 cd01483 E1_enzyme_family Super 96.4 0.054 1.2E-06 30.1 7.5 30 9-39 2-32 (143)
402 PRK14192 bifunctional 5,10-met 96.4 0.02 4.3E-07 35.8 6.1 38 2-40 156-193 (283)
403 TIGR03201 dearomat_had 6-hydro 96.4 0.015 3.3E-07 36.8 5.8 41 5-46 166-206 (349)
404 PRK14177 bifunctional 5,10-met 96.4 0.022 4.7E-07 35.7 6.2 43 2-45 156-198 (284)
405 PRK14190 bifunctional 5,10-met 96.4 0.025 5.4E-07 35.5 6.5 39 2-41 155-193 (284)
406 PRK14180 bifunctional 5,10-met 96.4 0.024 5.1E-07 35.5 6.3 43 2-45 155-197 (282)
407 PRK14172 bifunctional 5,10-met 96.4 0.024 5.3E-07 35.4 6.3 43 2-45 155-197 (278)
408 PLN00203 glutamyl-tRNA reducta 96.4 0.016 3.6E-07 39.1 5.8 46 3-50 264-310 (519)
409 PRK09880 L-idonate 5-dehydroge 96.3 0.019 4.2E-07 36.2 5.9 40 6-46 170-210 (343)
410 PRK14186 bifunctional 5,10-met 96.3 0.025 5.5E-07 35.7 6.3 43 2-45 155-197 (297)
411 PRK13256 thiopurine S-methyltr 96.3 0.024 5.1E-07 34.4 6.0 69 6-77 44-116 (226)
412 TIGR02822 adh_fam_2 zinc-bindi 96.3 0.022 4.7E-07 36.0 6.0 40 5-45 165-204 (329)
413 cd01485 E1-1_like Ubiquitin ac 96.3 0.095 2.1E-06 31.1 8.3 33 6-39 19-52 (198)
414 PRK01438 murD UDP-N-acetylmura 96.3 0.028 6.1E-07 37.2 6.7 46 6-52 16-62 (480)
415 cd05288 PGDH Prostaglandin deh 96.3 0.021 4.5E-07 35.5 5.8 40 6-45 146-185 (329)
416 cd05213 NAD_bind_Glutamyl_tRNA 96.3 0.021 4.5E-07 36.0 5.8 44 6-50 178-222 (311)
417 PRK14170 bifunctional 5,10-met 96.3 0.028 6E-07 35.3 6.2 42 2-44 154-195 (284)
418 cd08289 MDR_yhfp_like Yhfp put 96.3 0.024 5.2E-07 35.2 6.0 40 6-45 147-186 (326)
419 PF03848 TehB: Tellurite resis 96.3 0.064 1.4E-06 31.8 7.4 58 6-75 31-88 (192)
420 PRK14169 bifunctional 5,10-met 96.3 0.031 6.8E-07 35.0 6.3 42 2-44 153-194 (282)
421 cd08270 MDR4 Medium chain dehy 96.3 0.024 5.2E-07 34.8 5.9 41 6-46 133-173 (305)
422 PRK07411 hypothetical protein; 96.3 0.061 1.3E-06 35.1 7.9 62 6-75 38-119 (390)
423 cd05188 MDR Medium chain reduc 96.2 0.021 4.6E-07 34.2 5.5 40 5-45 134-173 (271)
424 PRK14187 bifunctional 5,10-met 96.2 0.03 6.5E-07 35.3 6.2 43 2-45 157-199 (294)
425 PRK09260 3-hydroxybutyryl-CoA 96.2 0.027 5.8E-07 35.0 6.0 41 8-49 3-43 (288)
426 PF00056 Ldh_1_N: lactate/mala 96.2 0.054 1.2E-06 30.4 6.7 45 8-52 2-48 (141)
427 PRK14179 bifunctional 5,10-met 96.2 0.027 5.8E-07 35.3 5.9 35 2-37 155-189 (284)
428 PLN02516 methylenetetrahydrofo 96.2 0.031 6.8E-07 35.3 6.2 43 2-45 164-206 (299)
429 PRK08328 hypothetical protein; 96.2 0.097 2.1E-06 31.8 8.1 33 6-39 27-60 (231)
430 PRK08293 3-hydroxybutyryl-CoA 96.2 0.04 8.7E-07 34.2 6.6 41 8-49 5-45 (287)
431 cd01079 NAD_bind_m-THF_DH NAD 96.2 0.023 5E-07 33.8 5.2 35 2-37 59-93 (197)
432 cd01492 Aos1_SUMO Ubiquitin ac 96.2 0.071 1.5E-06 31.6 7.3 50 6-56 21-90 (197)
433 TIGR00936 ahcY adenosylhomocys 96.2 0.033 7.1E-07 36.6 6.3 38 3-42 193-230 (406)
434 cd01489 Uba2_SUMO Ubiquitin ac 96.2 0.075 1.6E-06 33.8 7.7 60 9-76 2-81 (312)
435 cd08241 QOR1 Quinone oxidoredu 96.1 0.028 6E-07 34.4 5.8 39 5-43 139-177 (323)
436 PRK14166 bifunctional 5,10-met 96.1 0.037 8.1E-07 34.7 6.3 43 2-45 154-196 (282)
437 cd05291 HicDH_like L-2-hydroxy 96.1 0.037 8E-07 34.8 6.3 44 8-52 2-47 (306)
438 COG1091 RfbD dTDP-4-dehydrorha 96.1 0.029 6.4E-07 35.1 5.8 47 9-56 3-52 (281)
439 PRK13255 thiopurine S-methyltr 96.1 0.029 6.4E-07 33.7 5.6 68 6-76 38-109 (218)
440 PF02353 CMAS: Mycolic acid cy 96.1 0.025 5.5E-07 35.2 5.4 65 2-76 59-124 (273)
441 cd08250 Mgc45594_like Mgc45594 96.1 0.03 6.6E-07 34.8 5.9 40 5-44 139-178 (329)
442 COG5322 Predicted dehydrogenas 96.1 0.017 3.7E-07 36.2 4.5 45 6-50 167-211 (351)
443 cd08244 MDR_enoyl_red Possible 96.1 0.034 7.4E-07 34.4 6.0 40 5-44 142-181 (324)
444 KOG2013 SMT3/SUMO-activating c 96.1 0.041 8.8E-07 37.0 6.4 70 6-83 12-102 (603)
445 PRK06130 3-hydroxybutyryl-CoA 96.1 0.054 1.2E-06 33.9 6.8 41 8-49 6-46 (311)
446 cd08292 ETR_like_2 2-enoyl thi 96.1 0.032 7E-07 34.6 5.8 41 5-45 139-179 (324)
447 cd01484 E1-2_like Ubiquitin ac 96.1 0.12 2.5E-06 31.6 8.0 30 9-39 2-32 (234)
448 PRK14182 bifunctional 5,10-met 96.1 0.045 9.8E-07 34.3 6.3 42 2-44 154-195 (282)
449 PRK12749 quinate/shikimate deh 96.0 0.049 1.1E-06 34.1 6.5 46 3-50 122-171 (288)
450 PRK14171 bifunctional 5,10-met 96.0 0.043 9.4E-07 34.5 6.1 42 2-44 156-197 (288)
451 PRK06249 2-dehydropantoate 2-r 96.0 0.029 6.2E-07 35.3 5.5 38 1-40 1-38 (313)
452 cd08243 quinone_oxidoreductase 96.0 0.038 8.2E-07 34.0 6.0 39 5-43 142-180 (320)
453 cd00755 YgdL_like Family of ac 96.0 0.087 1.9E-06 32.1 7.2 35 3-39 9-44 (231)
454 cd08246 crotonyl_coA_red croto 96.0 0.038 8.2E-07 35.5 6.0 42 5-46 193-234 (393)
455 PRK07878 molybdopterin biosynt 96.0 0.12 2.5E-06 33.8 8.2 33 6-39 42-75 (392)
456 TIGR01751 crot-CoA-red crotony 96.0 0.037 8E-07 35.7 5.9 40 5-44 189-228 (398)
457 PLN02819 lysine-ketoglutarate 95.9 0.052 1.1E-06 39.6 6.9 64 6-83 569-647 (1042)
458 cd08239 THR_DH_like L-threonin 95.9 0.032 7E-07 35.0 5.4 40 5-45 163-203 (339)
459 PF03446 NAD_binding_2: NAD bi 95.9 0.14 3E-06 29.2 8.7 40 8-48 3-42 (163)
460 PRK00066 ldh L-lactate dehydro 95.9 0.074 1.6E-06 33.7 7.0 47 6-53 6-54 (315)
461 PRK15116 sulfur acceptor prote 95.9 0.14 3E-06 31.9 8.0 35 3-39 28-63 (268)
462 PF08704 GCD14: tRNA methyltra 95.9 0.11 2.4E-06 32.0 7.5 53 2-55 37-90 (247)
463 PRK13243 glyoxylate reductase; 95.9 0.032 7E-07 35.6 5.3 37 3-41 148-184 (333)
464 PRK14851 hypothetical protein; 95.9 0.13 2.7E-06 36.1 8.5 70 3-82 41-131 (679)
465 KOG0023 Alcohol dehydrogenase, 95.9 0.086 1.9E-06 33.8 7.0 46 5-51 181-226 (360)
466 PLN02545 3-hydroxybutyryl-CoA 95.9 0.078 1.7E-06 33.0 6.9 40 7-47 5-44 (295)
467 PRK13771 putative alcohol dehy 95.9 0.047 1E-06 34.1 6.0 42 5-46 162-203 (334)
468 PRK12480 D-lactate dehydrogena 95.9 0.13 2.9E-06 32.8 7.9 38 3-42 144-181 (330)
469 cd08230 glucose_DH Glucose deh 95.8 0.046 1E-06 34.7 5.9 34 5-39 172-205 (355)
470 cd05286 QOR2 Quinone oxidoredu 95.8 0.048 1E-06 33.3 5.9 40 5-44 136-175 (320)
471 TIGR03366 HpnZ_proposed putati 95.8 0.042 9.1E-07 33.8 5.5 37 6-43 121-158 (280)
472 PTZ00354 alcohol dehydrogenase 95.8 0.049 1.1E-06 33.8 5.9 40 5-44 140-179 (334)
473 PRK14193 bifunctional 5,10-met 95.8 0.066 1.4E-06 33.6 6.3 42 2-44 155-198 (284)
474 cd08288 MDR_yhdh Yhdh putative 95.8 0.057 1.2E-06 33.5 6.1 39 6-44 147-185 (324)
475 PLN02928 oxidoreductase family 95.8 0.037 8E-07 35.5 5.2 36 3-40 157-192 (347)
476 PF01135 PCMT: Protein-L-isoas 95.8 0.14 3.1E-06 30.7 7.4 65 2-74 69-133 (209)
477 PRK07877 hypothetical protein; 95.8 0.1 2.3E-06 36.7 7.7 70 3-83 105-195 (722)
478 TIGR02817 adh_fam_1 zinc-bindi 95.8 0.051 1.1E-06 33.9 5.7 39 6-44 149-188 (336)
479 PRK15469 ghrA bifunctional gly 95.7 0.09 1.9E-06 33.4 6.8 37 3-41 134-170 (312)
480 PF01210 NAD_Gly3P_dh_N: NAD-d 95.7 0.05 1.1E-06 30.9 5.2 38 9-47 2-39 (157)
481 cd08296 CAD_like Cinnamyl alco 95.7 0.059 1.3E-06 33.8 6.0 41 5-46 163-203 (333)
482 cd05280 MDR_yhdh_yhfp Yhdh and 95.7 0.061 1.3E-06 33.3 6.0 39 6-44 147-185 (325)
483 PLN02616 tetrahydrofolate dehy 95.7 0.061 1.3E-06 34.8 6.0 43 2-45 228-270 (364)
484 PF02558 ApbA: Ketopantoate re 95.7 0.052 1.1E-06 30.3 5.2 34 10-45 2-35 (151)
485 cd05282 ETR_like 2-enoyl thioe 95.7 0.058 1.2E-06 33.4 5.8 39 5-43 138-176 (323)
486 PRK14184 bifunctional 5,10-met 95.7 0.079 1.7E-06 33.3 6.2 42 2-44 154-199 (286)
487 cd05191 NAD_bind_amino_acid_DH 95.7 0.074 1.6E-06 27.2 5.3 34 3-38 21-55 (86)
488 PRK14852 hypothetical protein; 95.6 0.14 3E-06 37.2 8.0 68 6-82 332-420 (989)
489 PRK07066 3-hydroxybutyryl-CoA 95.6 0.091 2E-06 33.5 6.5 41 7-48 8-48 (321)
490 PLN02897 tetrahydrofolate dehy 95.6 0.071 1.5E-06 34.3 6.0 42 2-44 211-252 (345)
491 PLN02740 Alcohol dehydrogenase 95.6 0.057 1.2E-06 34.7 5.7 41 5-46 198-239 (381)
492 PRK06522 2-dehydropantoate 2-r 95.6 0.065 1.4E-06 33.2 5.8 39 8-47 2-40 (304)
493 cd00650 LDH_MDH_like NAD-depen 95.6 0.061 1.3E-06 33.1 5.5 44 9-52 1-48 (263)
494 PRK06487 glycerate dehydrogena 95.6 0.07 1.5E-06 33.9 5.9 35 3-39 146-180 (317)
495 cd08238 sorbose_phosphate_red 95.6 0.053 1.1E-06 35.3 5.5 44 5-48 175-221 (410)
496 COG0190 FolD 5,10-methylene-te 95.6 0.065 1.4E-06 33.6 5.6 43 2-45 153-195 (283)
497 cd01336 MDH_cytoplasmic_cytoso 95.6 0.046 9.9E-07 34.8 5.0 33 8-40 4-43 (325)
498 TIGR02818 adh_III_F_hyde S-(hy 95.5 0.067 1.4E-06 34.2 5.8 40 5-45 185-225 (368)
499 cd01488 Uba3_RUB Ubiquitin act 95.5 0.17 3.6E-06 32.0 7.3 59 9-75 2-80 (291)
500 PLN03139 formate dehydrogenase 95.5 0.19 4.2E-06 32.9 7.8 37 2-40 196-232 (386)
No 1
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.72 E-value=8.3e-17 Score=97.71 Aligned_cols=71 Identities=27% Similarity=0.328 Sum_probs=65.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||+++|||.+++++|+++|++|+++.|+.++++.+.+++...++.. +.++.+|++++++ +.+.++
T Consensus 6 ~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~--------v~vi~~DLs~~~~~~~l~~~ 77 (265)
T COG0300 6 GKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVE--------VEVIPADLSDPEALERLEDE 77 (265)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCce--------EEEEECcCCChhHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999877442 8899999999999 887764
No 2
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.65 E-value=7e-16 Score=94.37 Aligned_cols=75 Identities=25% Similarity=0.332 Sum_probs=66.8
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +|+++|||+++|||.++|..|++.|++++++.|..++++...+++++..+.. ++..+++|++|.++ ++
T Consensus 9 ~~~-~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-------~v~~~~~Dvs~~~~~~~ 80 (282)
T KOG1205|consen 9 RLA-GKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-------KVLVLQLDVSDEESVKK 80 (282)
T ss_pred HhC-CCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-------ccEEEeCccCCHHHHHH
Confidence 466 9999999999999999999999999999999999999999988888765541 48999999999999 98
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++.
T Consensus 81 ~~~~ 84 (282)
T KOG1205|consen 81 FVEW 84 (282)
T ss_pred HHHH
Confidence 8754
No 3
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.65 E-value=1.3e-15 Score=90.92 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=64.9
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...+.. +..+.+|++++++ +
T Consensus 1 ~~~~-~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~---------~~~~~~D~~~~~~~~ 70 (227)
T PRK08862 1 MDIK-SSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDN---------VYSFQLKDFSQESIR 70 (227)
T ss_pred CCCC-CeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCC---------eEEEEccCCCHHHHH
Confidence 7788 999999999999999999999999999999999998888887777654433 7889999999999 9
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 71 ~~~~~ 75 (227)
T PRK08862 71 HLFDA 75 (227)
T ss_pred HHHHH
Confidence 88764
No 4
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.65 E-value=2e-15 Score=90.85 Aligned_cols=74 Identities=28% Similarity=0.386 Sum_probs=64.0
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +|+++|||+++|||.+++++|+++|++|++++|++++++.+.+++...+.. +.++.+|++++++ +
T Consensus 2 ~~~~-~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~ 71 (254)
T PRK07478 2 MRLN-GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGE---------AVALAGDVRDEAYAK 71 (254)
T ss_pred CCCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHH
Confidence 5667 899999999999999999999999999999999988887777777654433 8899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 72 ~~~~~ 76 (254)
T PRK07478 72 ALVAL 76 (254)
T ss_pred HHHHH
Confidence 88764
No 5
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.2e-15 Score=93.50 Aligned_cols=75 Identities=24% Similarity=0.271 Sum_probs=64.0
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+|. +|+++|||+++|||++++++|+++|++|++++|+.++.+...+++....+. .++.++.+|++|.++ ++
T Consensus 11 ~l~-gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~-------~~v~~~~~Dl~d~~sv~~ 82 (313)
T PRK05854 11 DLS-GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPD-------AKLSLRALDLSSLASVAA 82 (313)
T ss_pred ccC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC-------CceEEEEecCCCHHHHHH
Confidence 356 899999999999999999999999999999999998888887777654322 228899999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 83 ~~~~ 86 (313)
T PRK05854 83 LGEQ 86 (313)
T ss_pred HHHH
Confidence 8764
No 6
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.6e-15 Score=91.08 Aligned_cols=75 Identities=24% Similarity=0.328 Sum_probs=63.0
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++..... .++.++.+|++|+++ +
T Consensus 4 ~~l~-~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------~~~~~~~~Dv~~~~~i~ 74 (263)
T PRK08339 4 IDLS-GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESN--------VDVSYIVADLTKREDLE 74 (263)
T ss_pred cCCC-CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC--------CceEEEEecCCCHHHHH
Confidence 3567 99999999999999999999999999999999998877777776654321 128899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 75 ~~~~~ 79 (263)
T PRK08339 75 RTVKE 79 (263)
T ss_pred HHHHH
Confidence 88764
No 7
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.3e-15 Score=90.54 Aligned_cols=74 Identities=23% Similarity=0.409 Sum_probs=63.5
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +|+++|||+++|||.+++++|+++|++|++++|+.+..+...+++...+.. +.++.+|++++++ +
T Consensus 5 ~~~~-~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~ 74 (253)
T PRK05867 5 FDLH-GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGK---------VVPVCCDVSQHQQVT 74 (253)
T ss_pred ccCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCe---------EEEEEccCCCHHHHH
Confidence 3466 899999999999999999999999999999999988888777777654433 8899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 75 ~~~~~ 79 (253)
T PRK05867 75 SMLDQ 79 (253)
T ss_pred HHHHH
Confidence 88764
No 8
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.62 E-value=5.4e-15 Score=91.97 Aligned_cols=74 Identities=31% Similarity=0.369 Sum_probs=65.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +++++|||+++|||+.+++.|+.+|+.|++.+|+.++.+.+.+.+.....+ .++.++++|+++.++ .++
T Consensus 33 ~~-~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~-------~~i~~~~lDLssl~SV~~f 104 (314)
T KOG1208|consen 33 LS-GKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKAN-------QKIRVIQLDLSSLKSVRKF 104 (314)
T ss_pred CC-CcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCC-------CceEEEECCCCCHHHHHHH
Confidence 45 899999999999999999999999999999999999999999999874333 338999999999999 988
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
.+.
T Consensus 105 a~~ 107 (314)
T KOG1208|consen 105 AEE 107 (314)
T ss_pred HHH
Confidence 764
No 9
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.61 E-value=5.5e-15 Score=88.40 Aligned_cols=68 Identities=32% Similarity=0.378 Sum_probs=62.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||+++|||.+++++|++.|++|++..|..++++.+..++.. .. +..+..|++|+++ +++++.
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~---------~~~~~~DVtD~~~~~~~i~~ 74 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GA---------ALALALDVTDRAAVEAAIEA 74 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--Cc---------eEEEeeccCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999998865 22 8899999999999 888763
No 10
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.61 E-value=6.8e-15 Score=92.07 Aligned_cols=73 Identities=27% Similarity=0.343 Sum_probs=63.7
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +++++|||+++|||++++++|+++|++|++++|+++.++...+++...+.. +.++.+|++|+++ ++
T Consensus 4 ~l~-~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~---------~~~~~~Dv~d~~~v~~ 73 (330)
T PRK06139 4 PLH-GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE---------VLVVPTDVTDADQVKA 73 (330)
T ss_pred CCC-CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEeeCCCHHHHHH
Confidence 456 899999999999999999999999999999999998888888777654443 7889999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 74 ~~~~ 77 (330)
T PRK06139 74 LATQ 77 (330)
T ss_pred HHHH
Confidence 8754
No 11
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.2e-14 Score=87.93 Aligned_cols=75 Identities=31% Similarity=0.345 Sum_probs=63.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +|+++|||+++|||++++++|+.+|++|++++|++++++...+++...++. .++.++.+|++|+++ ++
T Consensus 5 ~l~-~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~ 76 (265)
T PRK07062 5 QLE-GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPG-------ARLLAARCDVLDEADVAA 76 (265)
T ss_pred ccC-CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCC-------ceEEEEEecCCCHHHHHH
Confidence 356 899999999999999999999999999999999988888777777654322 128889999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 77 ~~~~ 80 (265)
T PRK07062 77 FAAA 80 (265)
T ss_pred HHHH
Confidence 7764
No 12
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.60 E-value=9.9e-15 Score=89.13 Aligned_cols=72 Identities=26% Similarity=0.322 Sum_probs=61.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
|. +|+++|||+++|||++++++|+++|++|++++++.+.++...+++...+.. +.++.+|++|+++ .++
T Consensus 4 ~~-~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~---------~~~~~~Dv~d~~~v~~~ 73 (275)
T PRK05876 4 FP-GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFD---------VHGVMCDVRHREEVTHL 73 (275)
T ss_pred cC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEeCCCCCHHHHHHH
Confidence 56 899999999999999999999999999999999988777777666543333 7889999999999 888
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 74 ~~~ 76 (275)
T PRK05876 74 ADE 76 (275)
T ss_pred HHH
Confidence 764
No 13
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.3e-14 Score=87.24 Aligned_cols=74 Identities=30% Similarity=0.381 Sum_probs=62.6
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|.|. +|+++|||++++||++++++|+.+|++|++++|+++..+...+++...+.. +.++.+|++++++ +
T Consensus 1 ~~l~-~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~ 70 (258)
T PRK07890 1 MLLK-GKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRR---------ALAVPTDITDEDQCA 70 (258)
T ss_pred CccC-CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCc---------eEEEecCCCCHHHHH
Confidence 4566 899999999999999999999999999999999987777776666543333 8899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 71 ~~~~~ 75 (258)
T PRK07890 71 NLVAL 75 (258)
T ss_pred HHHHH
Confidence 87754
No 14
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.59 E-value=3.8e-15 Score=87.38 Aligned_cols=70 Identities=30% Similarity=0.321 Sum_probs=61.9
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|.+. |.+++||||++|||++++++|.+.|..||++.|+++.++....+.. . +..+.||+.|.++ +
T Consensus 1 mk~t-gnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p----~---------~~t~v~Dv~d~~~~~ 66 (245)
T COG3967 1 MKTT-GNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP----E---------IHTEVCDVADRDSRR 66 (245)
T ss_pred Cccc-CcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc----c---------hheeeecccchhhHH
Confidence 6777 9999999999999999999999999999999999988877766442 2 7889999999999 9
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 67 ~lvew 71 (245)
T COG3967 67 ELVEW 71 (245)
T ss_pred HHHHH
Confidence 98765
No 15
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.59 E-value=1.3e-14 Score=87.30 Aligned_cols=74 Identities=28% Similarity=0.370 Sum_probs=62.8
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+.. +.++.+|++|+++ +
T Consensus 5 ~~l~-~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~ 74 (254)
T PRK08085 5 FSLA-GKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIK---------AHAAPFNVTHKQEVE 74 (254)
T ss_pred ccCC-CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCe---------EEEEecCCCCHHHHH
Confidence 4566 899999999999999999999999999999999988777777777544333 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 75 ~~~~~ 79 (254)
T PRK08085 75 AAIEH 79 (254)
T ss_pred HHHHH
Confidence 87754
No 16
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.59 E-value=1.6e-14 Score=86.99 Aligned_cols=73 Identities=30% Similarity=0.312 Sum_probs=61.7
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +|+++|||++++||++++++|+++|++|++++|++++.+...+.+...+.. +.++.+|++|+++ ++
T Consensus 7 ~~~-~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~---------~~~~~~D~~~~~~~~~ 76 (255)
T PRK07523 7 DLT-GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLS---------AHALAFDVTDHDAVRA 76 (255)
T ss_pred CCC-CCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCce---------EEEEEccCCCHHHHHH
Confidence 356 899999999999999999999999999999999987777766666543333 8889999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++.
T Consensus 77 ~~~~ 80 (255)
T PRK07523 77 AIDA 80 (255)
T ss_pred HHHH
Confidence 8764
No 17
>PRK08589 short chain dehydrogenase; Validated
Probab=99.59 E-value=1.7e-14 Score=87.75 Aligned_cols=71 Identities=28% Similarity=0.414 Sum_probs=60.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
|. +|+++|||+++|||++++++|+++|++|++++|+ +..+....++...+.. +.++.+|++++++ .++
T Consensus 4 l~-~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~ 72 (272)
T PRK08589 4 LE-NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGK---------AKAYHVDISDEQQVKDF 72 (272)
T ss_pred CC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCe---------EEEEEeecCCHHHHHHH
Confidence 55 8999999999999999999999999999999999 6666666666543333 8899999999999 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 73 ~~~ 75 (272)
T PRK08589 73 ASE 75 (272)
T ss_pred HHH
Confidence 764
No 18
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.59 E-value=1.8e-14 Score=88.79 Aligned_cols=73 Identities=27% Similarity=0.422 Sum_probs=62.4
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
.+. +++++|||+++|||++++++|+++|++|++++|+.+.++...+++...+.. +.++.+|++|+++ .+
T Consensus 37 ~~~-~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~---------~~~~~~Dl~d~~~v~~ 106 (293)
T PRK05866 37 DLT-GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGD---------AMAVPCDLSDLDAVDA 106 (293)
T ss_pred CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHH
Confidence 456 899999999999999999999999999999999988877777776544333 7899999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++.
T Consensus 107 ~~~~ 110 (293)
T PRK05866 107 LVAD 110 (293)
T ss_pred HHHH
Confidence 8763
No 19
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.59 E-value=1.8e-14 Score=86.48 Aligned_cols=74 Identities=28% Similarity=0.409 Sum_probs=62.6
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||+++|||.+++++|+++|++|++++|+.+..+.+.+++...+.. +.++++|+++.++ +
T Consensus 4 ~~l~-~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~ 73 (252)
T PRK07035 4 FDLT-GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGK---------AEALACHIGEMEQID 73 (252)
T ss_pred cccC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHH
Confidence 4567 899999999999999999999999999999999987777777766544333 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 74 ~~~~~ 78 (252)
T PRK07035 74 ALFAH 78 (252)
T ss_pred HHHHH
Confidence 77654
No 20
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2e-14 Score=89.13 Aligned_cols=72 Identities=28% Similarity=0.382 Sum_probs=57.9
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc----------cchHHHHHHHHHHhhhccCCCCCCceEEEEec
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE----------EKGNEVAALVEKENAKFHSNLGFPSAMFIRCD 72 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~D 72 (85)
|. +|+++|||+++|||+++++.|+..|++|++++|+. +.++...+++...+.. +.++++|
T Consensus 6 l~-~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~D 75 (305)
T PRK08303 6 LR-GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGR---------GIAVQVD 75 (305)
T ss_pred CC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCc---------eEEEEcC
Confidence 55 89999999999999999999999999999999974 2344444555433222 7789999
Q ss_pred CCCHHH-HHHhhh
Q 034737 73 VTNTKF-ALAFLR 84 (85)
Q Consensus 73 v~~~~~-~~~~~~ 84 (85)
++++++ ++++++
T Consensus 76 v~~~~~v~~~~~~ 88 (305)
T PRK08303 76 HLVPEQVRALVER 88 (305)
T ss_pred CCCHHHHHHHHHH
Confidence 999999 988764
No 21
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.58 E-value=1.9e-14 Score=86.78 Aligned_cols=74 Identities=34% Similarity=0.455 Sum_probs=62.0
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+.. .++.++.+|++++++ .++
T Consensus 5 l~-~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~ 76 (260)
T PRK07063 5 LA-GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAG-------ARVLAVPADVTDAASVAAA 76 (260)
T ss_pred cC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCC-------ceEEEEEccCCCHHHHHHH
Confidence 45 899999999999999999999999999999999988888877777642111 228899999999999 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 77 ~~~ 79 (260)
T PRK07063 77 VAA 79 (260)
T ss_pred HHH
Confidence 764
No 22
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.58 E-value=2.1e-14 Score=87.93 Aligned_cols=71 Identities=24% Similarity=0.440 Sum_probs=64.2
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
.. |++++|||+++|+|+.++.+|+++|+++++.|.+.+..++..++++..+ . +..+.||++++++ .+.
T Consensus 36 v~-g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~---------~~~y~cdis~~eei~~~ 104 (300)
T KOG1201|consen 36 VS-GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-E---------AKAYTCDISDREEIYRL 104 (300)
T ss_pred cc-CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-c---------eeEEEecCCCHHHHHHH
Confidence 45 8999999999999999999999999999999999999999999888653 3 8999999999999 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
.++
T Consensus 105 a~~ 107 (300)
T KOG1201|consen 105 AKK 107 (300)
T ss_pred HHH
Confidence 664
No 23
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.57 E-value=2.7e-14 Score=85.78 Aligned_cols=74 Identities=41% Similarity=0.619 Sum_probs=62.7
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|.|. +|+++|||++++||.+++++|+++|++|++++|+.+..+...+++...+.. +.++.+|+++.++ .
T Consensus 3 ~~l~-~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~i~ 72 (253)
T PRK06172 3 MTFS-GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE---------ALFVACDVTRDAEVK 72 (253)
T ss_pred cCCC-CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHH
Confidence 3466 899999999999999999999999999999999988777777666544333 8899999999998 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 73 ~~~~~ 77 (253)
T PRK06172 73 ALVEQ 77 (253)
T ss_pred HHHHH
Confidence 87653
No 24
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.57 E-value=2.7e-14 Score=89.42 Aligned_cols=72 Identities=26% Similarity=0.357 Sum_probs=62.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +++++|||+++|||++++++|+++|++|++++|+++.++...+++...+.. +.++.+|++|+++ +++
T Consensus 6 l~-~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~---------~~~v~~Dv~d~~~v~~~ 75 (334)
T PRK07109 6 IG-RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGE---------ALAVVADVADAEAVQAA 75 (334)
T ss_pred CC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCc---------EEEEEecCCCHHHHHHH
Confidence 45 789999999999999999999999999999999988888877777655444 8899999999999 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 76 ~~~ 78 (334)
T PRK07109 76 ADR 78 (334)
T ss_pred HHH
Confidence 653
No 25
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.57 E-value=3.1e-14 Score=86.35 Aligned_cols=74 Identities=27% Similarity=0.408 Sum_probs=62.1
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +|+++|||+++|||.+++++|+.+|++|++++|+.+..+.....+...+.. +.++.+|++++++ .
T Consensus 5 ~~~~-~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~i~ 74 (264)
T PRK07576 5 FDFA-GKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPE---------GLGVSADVRDYAAVE 74 (264)
T ss_pred ccCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCc---------eEEEECCCCCHHHHH
Confidence 4567 899999999999999999999999999999999987776666666544333 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 75 ~~~~~ 79 (264)
T PRK07576 75 AAFAQ 79 (264)
T ss_pred HHHHH
Confidence 87754
No 26
>PRK06720 hypothetical protein; Provisional
Probab=99.57 E-value=4.2e-14 Score=81.37 Aligned_cols=74 Identities=32% Similarity=0.477 Sum_probs=61.2
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|.+. +++++|||+++|||.++++.|++.|++|++++++.+..+...+++...+.. +.++.+|++++++ +
T Consensus 12 ~~l~-gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~v~ 81 (169)
T PRK06720 12 MKLA-GKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGE---------ALFVSYDMEKQGDWQ 81 (169)
T ss_pred cccC-CCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHH
Confidence 3466 899999999999999999999999999999999887776666666533333 7789999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 82 ~~v~~ 86 (169)
T PRK06720 82 RVISI 86 (169)
T ss_pred HHHHH
Confidence 87653
No 27
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.57 E-value=3.5e-14 Score=87.11 Aligned_cols=72 Identities=29% Similarity=0.317 Sum_probs=59.2
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc---------cchHHHHHHHHHHhhhccCCCCCCceEEEEecC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE---------EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDV 73 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv 73 (85)
+. +|+++|||+++|||++++++|++.|++|++++++. +.++...+++...+.. +.++.+|+
T Consensus 4 l~-~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~Dv 73 (286)
T PRK07791 4 LD-GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGE---------AVANGDDI 73 (286)
T ss_pred cC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCc---------eEEEeCCC
Confidence 45 89999999999999999999999999999998765 5556666666543333 78899999
Q ss_pred CCHHH-HHHhhh
Q 034737 74 TNTKF-ALAFLR 84 (85)
Q Consensus 74 ~~~~~-~~~~~~ 84 (85)
+|+++ .+++++
T Consensus 74 ~~~~~v~~~~~~ 85 (286)
T PRK07791 74 ADWDGAANLVDA 85 (286)
T ss_pred CCHHHHHHHHHH
Confidence 99999 888764
No 28
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.57 E-value=3.4e-14 Score=87.69 Aligned_cols=75 Identities=27% Similarity=0.305 Sum_probs=61.4
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+.+...... ..+.++.+|++|.++ ++
T Consensus 13 ~~~-~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~-------~~~~~~~~Dl~d~~~v~~ 84 (306)
T PRK06197 13 DQS-GRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPG-------ADVTLQELDLTSLASVRA 84 (306)
T ss_pred cCC-CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC-------CceEEEECCCCCHHHHHH
Confidence 355 899999999999999999999999999999999987777666666543211 228899999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 85 ~~~~ 88 (306)
T PRK06197 85 AADA 88 (306)
T ss_pred HHHH
Confidence 8764
No 29
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.56 E-value=4.2e-14 Score=85.30 Aligned_cols=72 Identities=31% Similarity=0.482 Sum_probs=59.4
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+|. +|+++|||+++|||.+++++|++.|++|++++++ +..+.+.+.+...+.. +.++.+|+++.++ .+
T Consensus 12 ~l~-~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~i~~ 80 (258)
T PRK06935 12 SLD-GKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRK---------VTFVQVDLTKPESAEK 80 (258)
T ss_pred cCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHHH
Confidence 456 8999999999999999999999999999999988 5555665555443333 8899999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 81 ~~~~ 84 (258)
T PRK06935 81 VVKE 84 (258)
T ss_pred HHHH
Confidence 8764
No 30
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.56 E-value=3.6e-14 Score=85.91 Aligned_cols=74 Identities=28% Similarity=0.326 Sum_probs=62.8
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +|+++|||++++||++++++|+.+|++|++++++++..+.....+...+.. +.++++|++++++ +
T Consensus 6 ~~~~-~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~ 75 (265)
T PRK07097 6 FSLK-GKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIE---------AHGYVCDVTDEDGVQ 75 (265)
T ss_pred cCCC-CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHH
Confidence 3456 899999999999999999999999999999999988777776666544333 8899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 76 ~~~~~ 80 (265)
T PRK07097 76 AMVSQ 80 (265)
T ss_pred HHHHH
Confidence 88764
No 31
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.56 E-value=3.4e-14 Score=85.60 Aligned_cols=72 Identities=35% Similarity=0.446 Sum_probs=60.3
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+|. +++++|||+++|||++++++|+++|++|++++|+++.. +..+++...+.. +.++.+|++++++ .+
T Consensus 4 ~l~-~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~ 72 (258)
T PRK08628 4 NLK-DKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPR---------AEFVQVDLTDDAQCRD 72 (258)
T ss_pred CcC-CCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCc---------eEEEEccCCCHHHHHH
Confidence 667 99999999999999999999999999999999988665 555555544433 8899999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 73 ~~~~ 76 (258)
T PRK08628 73 AVEQ 76 (258)
T ss_pred HHHH
Confidence 7764
No 32
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.56 E-value=4.2e-14 Score=85.08 Aligned_cols=73 Identities=32% Similarity=0.407 Sum_probs=62.5
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +|+++|||++++||++++++|+++|++|++++|+++.++....++...+.. +.++.+|++++++ .+
T Consensus 8 ~~~-~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~ 77 (256)
T PRK06124 8 SLA-GQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGA---------AEALAFDIADEEAVAA 77 (256)
T ss_pred CCC-CCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEccCCCHHHHHH
Confidence 466 899999999999999999999999999999999987777777766554433 8899999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 78 ~~~~ 81 (256)
T PRK06124 78 AFAR 81 (256)
T ss_pred HHHH
Confidence 7764
No 33
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.56 E-value=3.5e-14 Score=85.07 Aligned_cols=73 Identities=34% Similarity=0.376 Sum_probs=61.2
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||++++||.+++++|+++|++|++++|+.+..+...+.+. .+. ++.++++|++|+++ +
T Consensus 1 m~~~-~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~---------~~~~~~~D~~~~~~~~ 69 (252)
T PRK06138 1 MRLA-GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGG---------RAFARQGDVGSAEAVE 69 (252)
T ss_pred CCCC-CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCC---------eEEEEEcCCCCHHHHH
Confidence 7788 9999999999999999999999999999999999876666555553 122 28899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 70 ~~~~~ 74 (252)
T PRK06138 70 ALVDF 74 (252)
T ss_pred HHHHH
Confidence 87753
No 34
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.56 E-value=4.4e-14 Score=85.54 Aligned_cols=72 Identities=28% Similarity=0.349 Sum_probs=61.1
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +++++|||+++|||.+++++|+.+|++|++++|+.++.+.+.+.+...+.. +.++.+|++++++ .++
T Consensus 8 ~~-~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~~ 77 (263)
T PRK07814 8 LD-DQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRR---------AHVVAADLAHPEATAGL 77 (263)
T ss_pred CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHHH
Confidence 55 899999999999999999999999999999999987777776666543333 8899999999999 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 78 ~~~ 80 (263)
T PRK07814 78 AGQ 80 (263)
T ss_pred HHH
Confidence 664
No 35
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.56 E-value=5.9e-14 Score=85.52 Aligned_cols=74 Identities=28% Similarity=0.405 Sum_probs=58.6
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-------hHHHHHHHHHHhhhccCCCCCCceEEEEecC
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-------GNEVAALVEKENAKFHSNLGFPSAMFIRCDV 73 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv 73 (85)
|++. +|+++|||+++|||.+++++|+++|++|++++|+.+. ++...+++...+.. +.++.+|+
T Consensus 2 ~~~~-~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~~~D~ 71 (273)
T PRK08278 2 MSLS-GKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ---------ALPLVGDV 71 (273)
T ss_pred CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCc---------eEEEEecC
Confidence 4567 8999999999999999999999999999999987643 33334444433223 88999999
Q ss_pred CCHHH-HHHhhh
Q 034737 74 TNTKF-ALAFLR 84 (85)
Q Consensus 74 ~~~~~-~~~~~~ 84 (85)
+++++ .+++++
T Consensus 72 ~~~~~i~~~~~~ 83 (273)
T PRK08278 72 RDEDQVAAAVAK 83 (273)
T ss_pred CCHHHHHHHHHH
Confidence 99999 887763
No 36
>PRK06194 hypothetical protein; Provisional
Probab=99.56 E-value=4.5e-14 Score=86.24 Aligned_cols=72 Identities=24% Similarity=0.306 Sum_probs=60.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
|. +++++|||+++|||++++++|+++|++|++++|+.+.++....++...+.. +.++.+|++|+++ +++
T Consensus 4 ~~-~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~d~~~~~~~ 73 (287)
T PRK06194 4 FA-GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAE---------VLGVRTDVSDAAQVEAL 73 (287)
T ss_pred CC-CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHHH
Confidence 55 789999999999999999999999999999999887777776666543333 8889999999999 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
++.
T Consensus 74 ~~~ 76 (287)
T PRK06194 74 ADA 76 (287)
T ss_pred HHH
Confidence 653
No 37
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.55 E-value=6.3e-14 Score=84.45 Aligned_cols=74 Identities=36% Similarity=0.504 Sum_probs=60.5
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF- 78 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 78 (85)
|++. +|+++|||+++|||++++++|+++|++|++++|+.+ ..+...+.+...+.. +.++.+|++|+++
T Consensus 4 ~~~~-~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~i 73 (254)
T PRK06114 4 FDLD-GQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRR---------AIQIAADVTSKADL 73 (254)
T ss_pred cCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHH
Confidence 4567 899999999999999999999999999999998764 355565666544333 7889999999999
Q ss_pred HHHhhh
Q 034737 79 ALAFLR 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
++++++
T Consensus 74 ~~~~~~ 79 (254)
T PRK06114 74 RAAVAR 79 (254)
T ss_pred HHHHHH
Confidence 887764
No 38
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.55 E-value=4.4e-14 Score=85.42 Aligned_cols=73 Identities=30% Similarity=0.399 Sum_probs=61.5
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +++++|||++++||.+++++|+++|++|++++|+++..+....++ ..... +.++.+|++|+++ .
T Consensus 1 m~~~-~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~---------~~~~~~D~~d~~~~~ 69 (263)
T PRK09072 1 MDLK-DKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGR---------HRWVVADLTSEAGRE 69 (263)
T ss_pred CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCc---------eEEEEccCCCHHHHH
Confidence 6788 899999999999999999999999999999999987777666655 22222 8899999999998 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 70 ~~~~~ 74 (263)
T PRK09072 70 AVLAR 74 (263)
T ss_pred HHHHH
Confidence 87653
No 39
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.55 E-value=4.8e-14 Score=84.37 Aligned_cols=73 Identities=34% Similarity=0.464 Sum_probs=61.9
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +++++|||++++||.+++++|+++|++|++++|+++..+.+...+.. +.. +.++.+|++|+++ .
T Consensus 1 ~~~~-~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~---------~~~~~~D~~~~~~~~ 69 (251)
T PRK07231 1 MRLE-GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGR---------AIAVAADVSDEADVE 69 (251)
T ss_pred CCcC-CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCe---------EEEEECCCCCHHHHH
Confidence 6778 89999999999999999999999999999999998777666665543 222 8899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 70 ~~~~~ 74 (251)
T PRK07231 70 AAVAA 74 (251)
T ss_pred HHHHH
Confidence 87753
No 40
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.55 E-value=4.7e-14 Score=85.06 Aligned_cols=73 Identities=30% Similarity=0.383 Sum_probs=61.7
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +|+++|||++++||.+++++|+++|++|++++|+.++.+...+.+...+.. +.++.+|++|+++ ++
T Consensus 9 ~~~-~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~---------~~~~~~Dl~d~~~i~~ 78 (259)
T PRK08213 9 DLS-GKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGID---------ALWIAADVADEADIER 78 (259)
T ss_pred CcC-CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEccCCCHHHHHH
Confidence 456 899999999999999999999999999999999987777766666543333 7889999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 79 ~~~~ 82 (259)
T PRK08213 79 LAEE 82 (259)
T ss_pred HHHH
Confidence 7754
No 41
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.55 E-value=4e-14 Score=85.98 Aligned_cols=70 Identities=36% Similarity=0.336 Sum_probs=59.8
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +++++|||+++|||++++++|+.+|++|++++|+++.++...+.+. . +.++.+|++|+++ .
T Consensus 1 ~~~~-~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~---------~~~~~~D~~~~~~~~ 66 (273)
T PRK07825 1 DDLR-GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----L---------VVGGPLDVTDPASFA 66 (273)
T ss_pred CCCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----c---------ceEEEccCCCHHHHH
Confidence 6788 8999999999999999999999999999999999877666555442 2 6789999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 67 ~~~~~ 71 (273)
T PRK07825 67 AFLDA 71 (273)
T ss_pred HHHHH
Confidence 87764
No 42
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.55 E-value=5e-14 Score=85.77 Aligned_cols=73 Identities=30% Similarity=0.441 Sum_probs=61.8
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++...+.. +.++++|++++++ .+
T Consensus 7 ~~~-~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~~ 76 (278)
T PRK08277 7 SLK-GKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE---------ALAVKADVLDKESLEQ 76 (278)
T ss_pred ccC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHH
Confidence 456 899999999999999999999999999999999987777777766543333 8899999999998 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 77 ~~~~ 80 (278)
T PRK08277 77 ARQQ 80 (278)
T ss_pred HHHH
Confidence 7653
No 43
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.55 E-value=4.4e-14 Score=87.77 Aligned_cols=72 Identities=21% Similarity=0.146 Sum_probs=60.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +|+++|||+++|||.++++.|+.+|++|++++|+.++.+...+++..... ++.++.+|+++.++ +++
T Consensus 4 ~~-~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---------~~~~~~~Dl~~~~~v~~~ 73 (322)
T PRK07453 4 DA-KGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPD---------SYTIIHIDLGDLDSVRRF 73 (322)
T ss_pred CC-CCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCC---------ceEEEEecCCCHHHHHHH
Confidence 45 89999999999999999999999999999999998877776666642222 28899999999999 888
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 74 ~~~ 76 (322)
T PRK07453 74 VDD 76 (322)
T ss_pred HHH
Confidence 764
No 44
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.55 E-value=5.5e-14 Score=84.71 Aligned_cols=72 Identities=29% Similarity=0.413 Sum_probs=56.9
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||+++|||++++++|+++|++|++++|+.. +.....+...+.. +.++.+|++++++ +
T Consensus 4 ~~l~-~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~ 71 (251)
T PRK12481 4 FDLN-GKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRK---------FHFITADLIQQKDID 71 (251)
T ss_pred cccC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCe---------EEEEEeCCCCHHHHH
Confidence 4566 899999999999999999999999999999887642 3333334332222 8899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 72 ~~~~~ 76 (251)
T PRK12481 72 SIVSQ 76 (251)
T ss_pred HHHHH
Confidence 88764
No 45
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.55 E-value=3.4e-14 Score=85.90 Aligned_cols=71 Identities=35% Similarity=0.404 Sum_probs=58.2
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|+ +|+++|||+++|||++++++|+++|++|++++|+.+.++.+.... +.. +.++.+|+++.++ .
T Consensus 1 m~~~-~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~---~~~---------~~~~~~D~~~~~~~~ 67 (262)
T TIGR03325 1 MRLK-GEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAH---GDA---------VVGVEGDVRSLDDHK 67 (262)
T ss_pred CCcC-CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc---CCc---------eEEEEeccCCHHHHH
Confidence 7788 999999999999999999999999999999999876555443211 122 7889999999998 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 68 ~~~~~ 72 (262)
T TIGR03325 68 EAVAR 72 (262)
T ss_pred HHHHH
Confidence 87754
No 46
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.55 E-value=9.2e-14 Score=85.04 Aligned_cols=76 Identities=34% Similarity=0.370 Sum_probs=64.9
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+|. +|+++|||+++|||++++++|++.|++|++++|+++..+.....+...+. .+.++..+.||+++.++ ++
T Consensus 5 ~l~-gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~~~~ 77 (270)
T KOG0725|consen 5 RLA-GKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGY------TGGKVLAIVCDVSKEVDVEK 77 (270)
T ss_pred cCC-CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC------CCCeeEEEECcCCCHHHHHH
Confidence 467 99999999999999999999999999999999999988888877765432 13458999999999988 87
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++.
T Consensus 78 l~~~ 81 (270)
T KOG0725|consen 78 LVEF 81 (270)
T ss_pred HHHH
Confidence 7653
No 47
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.54 E-value=7.5e-14 Score=84.50 Aligned_cols=69 Identities=39% Similarity=0.536 Sum_probs=58.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
++ +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++ +.. +.++.+|++++++ .++
T Consensus 4 ~~-~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dl~~~~~~~~~ 70 (261)
T PRK08265 4 LA-GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GER---------ARFIATDITDDAAIERA 70 (261)
T ss_pred CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCe---------eEEEEecCCCHHHHHHH
Confidence 66 899999999999999999999999999999999987666655444 222 7889999999999 888
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
++.
T Consensus 71 ~~~ 73 (261)
T PRK08265 71 VAT 73 (261)
T ss_pred HHH
Confidence 764
No 48
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.54 E-value=9.4e-14 Score=83.09 Aligned_cols=74 Identities=32% Similarity=0.431 Sum_probs=63.0
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +++++|||++++||..++++|+++|++|++++|+.++.+....++...+.. +.++.+|++++++ +
T Consensus 1 ~~~~-~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~ 70 (253)
T PRK08217 1 MDLK-DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE---------VRGYAANVTDEEDVE 70 (253)
T ss_pred CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHH
Confidence 6778 999999999999999999999999999999999987777766666544333 8889999999998 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 71 ~~~~~ 75 (253)
T PRK08217 71 ATFAQ 75 (253)
T ss_pred HHHHH
Confidence 77654
No 49
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.54 E-value=1e-13 Score=82.52 Aligned_cols=74 Identities=34% Similarity=0.478 Sum_probs=62.7
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +++++|||++++||..++++|+++|+.|++++|++...+.....+...+.. +.++.+|++++++ .
T Consensus 1 ~~~~-~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~ 70 (246)
T PRK05653 1 MSLQ-GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGE---------ARVLVFDVSDEAAVR 70 (246)
T ss_pred CCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCc---------eEEEEccCCCHHHHH
Confidence 6777 899999999999999999999999999999999987777666666544433 8899999999998 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 71 ~~~~~ 75 (246)
T PRK05653 71 ALIEA 75 (246)
T ss_pred HHHHH
Confidence 77653
No 50
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1e-13 Score=83.07 Aligned_cols=73 Identities=30% Similarity=0.398 Sum_probs=60.4
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+++ +|+++|||++++||.+++++|+++|++|++++|+++..+...+++...... +.++.+|+++.++ ++
T Consensus 3 ~~~-~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~ 72 (250)
T PRK07774 3 RFD-DKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGT---------AIAVQVDVSDPDSAKA 72 (250)
T ss_pred ccC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHH
Confidence 466 899999999999999999999999999999999977666666655433323 7889999999998 87
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 73 ~~~~ 76 (250)
T PRK07774 73 MADA 76 (250)
T ss_pred HHHH
Confidence 7653
No 51
>PRK08643 acetoin reductase; Validated
Probab=99.54 E-value=8.8e-14 Score=83.71 Aligned_cols=70 Identities=31% Similarity=0.447 Sum_probs=60.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||+++|||.+++++|+++|++|++++|+.+..+....++...+.. +.++++|++++++ ++++++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~~ 72 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGK---------AIAVKADVSDRDQVFAAVRQ 72 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHHHHHH
Confidence 689999999999999999999999999999999988777777766543333 7889999999999 887764
No 52
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.53 E-value=1.1e-13 Score=82.71 Aligned_cols=75 Identities=31% Similarity=0.364 Sum_probs=61.5
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|.+..+|+++|||++++||+.++++|+++|++|++++|+++..+.+.+.+...+.. +.++.+|++++++ .
T Consensus 1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~ 71 (241)
T PRK07454 1 MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVK---------AAAYSIDLSNPEAIA 71 (241)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCc---------EEEEEccCCCHHHHH
Confidence 45554789999999999999999999999999999999987766666665543333 8899999999998 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 72 ~~~~~ 76 (241)
T PRK07454 72 PGIAE 76 (241)
T ss_pred HHHHH
Confidence 77653
No 53
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.53 E-value=1e-13 Score=83.37 Aligned_cols=70 Identities=24% Similarity=0.351 Sum_probs=59.6
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||+++|||++++++|+++|++|++++|+.+..+...+.+...+.. +.++++|++|+++ ++++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~~ 71 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQ---------VLTVQMDVRNPEDVQKMVEQ 71 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHHHHHHH
Confidence 579999999999999999999999999999999987777766666543333 8899999999999 887764
No 54
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.53 E-value=1.2e-13 Score=83.17 Aligned_cols=74 Identities=27% Similarity=0.479 Sum_probs=61.9
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +|+++|||+++|||.+++++|+.+|++|++++|+.+..+....++...+.. +.++.+|+++.++ .
T Consensus 7 ~~l~-~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~i~ 76 (255)
T PRK06113 7 LRLD-GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ---------AFACRCDITSEQELS 76 (255)
T ss_pred cCcC-CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHH
Confidence 3466 899999999999999999999999999999999887777776666543333 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++..
T Consensus 77 ~~~~~ 81 (255)
T PRK06113 77 ALADF 81 (255)
T ss_pred HHHHH
Confidence 87653
No 55
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.53 E-value=1.2e-13 Score=82.97 Aligned_cols=72 Identities=39% Similarity=0.507 Sum_probs=61.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
|. +++++|||++++||.+++++|+.+|++|++++|+++..+....++...+.. +.++.+|++++++ .++
T Consensus 2 ~~-~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~ 71 (258)
T PRK12429 2 LK-GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK---------AIGVAMDVTDEEAINAG 71 (258)
T ss_pred CC-CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHHH
Confidence 45 889999999999999999999999999999999988777777666544333 8899999999999 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 72 ~~~ 74 (258)
T PRK12429 72 IDY 74 (258)
T ss_pred HHH
Confidence 763
No 56
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.53 E-value=8.2e-14 Score=79.08 Aligned_cols=69 Identities=33% Similarity=0.515 Sum_probs=57.8
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC--ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS--EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
|+++|||+++|||++++++|+++|. .|+++.|+ .+..+.+...+...+.. +.++++|++++++ ++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~---------~~~~~~D~~~~~~~~~~~ 71 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAK---------ITFIECDLSDPESIRALI 71 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSE---------EEEEESETTSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccc---------cccccccccccccccccc
Confidence 6899999999999999999999965 67778888 56677777777655444 9999999999999 9988
Q ss_pred hh
Q 034737 83 LR 84 (85)
Q Consensus 83 ~~ 84 (85)
++
T Consensus 72 ~~ 73 (167)
T PF00106_consen 72 EE 73 (167)
T ss_dssp HH
T ss_pred cc
Confidence 75
No 57
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.53 E-value=1.2e-13 Score=83.55 Aligned_cols=74 Identities=24% Similarity=0.377 Sum_probs=58.5
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
+|. +|+++|||+++|||++++++|++.|++|+++++ +.+.++....++..... .++.++.+|++|+++ +
T Consensus 5 ~l~-~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~ 75 (260)
T PRK08416 5 EMK-GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG--------IKAKAYPLNILEPETYK 75 (260)
T ss_pred ccC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcC--------CceEEEEcCCCCHHHHH
Confidence 356 899999999999999999999999999988865 45555555555543221 128899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 76 ~~~~~ 80 (260)
T PRK08416 76 ELFKK 80 (260)
T ss_pred HHHHH
Confidence 88764
No 58
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.53 E-value=1.3e-13 Score=83.38 Aligned_cols=73 Identities=22% Similarity=0.280 Sum_probs=55.7
Q ss_pred CCCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 1 MELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 1 ~~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
|++. +|+++|||++ +|||++++++|+++|++|++++|+.+..+ ..+++...... ..++++|++|+++
T Consensus 6 ~~~~-~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~---------~~~~~~D~~~~~~ 74 (258)
T PRK07533 6 LPLA-GKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDA---------PIFLPLDVREPGQ 74 (258)
T ss_pred cccC-CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhcc---------ceEEecCcCCHHH
Confidence 4567 9999999998 59999999999999999999999864322 22233222222 5678999999999
Q ss_pred -HHHhhh
Q 034737 79 -ALAFLR 84 (85)
Q Consensus 79 -~~~~~~ 84 (85)
++++++
T Consensus 75 v~~~~~~ 81 (258)
T PRK07533 75 LEAVFAR 81 (258)
T ss_pred HHHHHHH
Confidence 988764
No 59
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.52 E-value=1.4e-13 Score=82.43 Aligned_cols=72 Identities=24% Similarity=0.344 Sum_probs=57.6
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||+++|||.+++++|+++|++|++++|+. .....+.+...+.. +.++++|++++++ .
T Consensus 1 ~~~~-~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~ 68 (248)
T TIGR01832 1 FSLE-GKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRR---------FLSLTADLSDIEAIK 68 (248)
T ss_pred CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCc---------eEEEECCCCCHHHHH
Confidence 5677 99999999999999999999999999999999875 23333344332222 8899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 69 ~~~~~ 73 (248)
T TIGR01832 69 ALVDS 73 (248)
T ss_pred HHHHH
Confidence 87764
No 60
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.52 E-value=1.9e-13 Score=82.45 Aligned_cols=75 Identities=20% Similarity=0.285 Sum_probs=62.4
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||+++|||+++++.|+++|++|++++|+++..+...+++...... ++.++.+|++++++ .
T Consensus 3 ~~~~-~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~--------~~~~~~~D~~~~~~~~ 73 (259)
T PRK06125 3 LHLA-GKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGV--------DVAVHALDLSSPEARE 73 (259)
T ss_pred cCCC-CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCC--------ceEEEEecCCCHHHHH
Confidence 4467 899999999999999999999999999999999988777777666543221 27889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 74 ~~~~~ 78 (259)
T PRK06125 74 QLAAE 78 (259)
T ss_pred HHHHH
Confidence 87653
No 61
>PRK09242 tropinone reductase; Provisional
Probab=99.52 E-value=1.4e-13 Score=82.97 Aligned_cols=75 Identities=21% Similarity=0.275 Sum_probs=62.4
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +|+++|||+++|||++++++|+++|++|++++|+.+..+...+++....+. .++.++.+|++++++ ++
T Consensus 6 ~~~-~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~-------~~~~~~~~Dl~~~~~~~~ 77 (257)
T PRK09242 6 RLD-GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPE-------REVHGLAADVSDDEDRRA 77 (257)
T ss_pred ccC-CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCC-------CeEEEEECCCCCHHHHHH
Confidence 456 899999999999999999999999999999999987777777666544211 228899999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 78 ~~~~ 81 (257)
T PRK09242 78 ILDW 81 (257)
T ss_pred HHHH
Confidence 7764
No 62
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.52 E-value=8e-14 Score=84.28 Aligned_cols=70 Identities=33% Similarity=0.386 Sum_probs=58.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
.|. +|+++|||+++|||++++++|+++|++|++++|+++.++.+..++ ... +.++++|++++++ ++
T Consensus 3 ~~~-~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~ 69 (263)
T PRK06200 3 WLH-GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDH---------VLVVEGDVTSYADNQR 69 (263)
T ss_pred CCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------ceEEEccCCCHHHHHH
Confidence 456 899999999999999999999999999999999987666554433 112 7889999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 70 ~~~~ 73 (263)
T PRK06200 70 AVDQ 73 (263)
T ss_pred HHHH
Confidence 7764
No 63
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.52 E-value=1.4e-13 Score=82.86 Aligned_cols=72 Identities=39% Similarity=0.552 Sum_probs=61.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
++ +|+++|||++++||.++++.|+++|++|++++|+++..+...+.+...+.. +.++++|+++.++ .++
T Consensus 5 ~~-~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~ 74 (262)
T PRK13394 5 LN-GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGK---------AIGVAMDVTNEDAVNAG 74 (262)
T ss_pred CC-CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCce---------EEEEECCCCCHHHHHHH
Confidence 45 899999999999999999999999999999999988777777777544333 7889999999999 877
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
++.
T Consensus 75 ~~~ 77 (262)
T PRK13394 75 IDK 77 (262)
T ss_pred HHH
Confidence 653
No 64
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.52 E-value=1.4e-13 Score=83.75 Aligned_cols=71 Identities=21% Similarity=0.272 Sum_probs=56.0
Q ss_pred CCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 3 LKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 3 l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|. +|+++|||+++ |||++++++|+++|++|++++|+. ..+...+++...... ..++.+|++|+++ +
T Consensus 4 l~-~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~ 72 (262)
T PRK07984 4 LS-GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS---------DIVLPCDVAEDASID 72 (262)
T ss_pred cC-CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCC---------ceEeecCCCCHHHHH
Confidence 44 89999999985 999999999999999999998873 344444555433222 6788999999999 9
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 73 ~~~~~ 77 (262)
T PRK07984 73 AMFAE 77 (262)
T ss_pred HHHHH
Confidence 88764
No 65
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.52 E-value=1.1e-13 Score=83.51 Aligned_cols=70 Identities=20% Similarity=0.285 Sum_probs=55.0
Q ss_pred CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737 2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF- 78 (85)
Q Consensus 2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 78 (85)
.|. +|+++|||++ +|||++++++|+++|++|++++|+. +.....+++. .. .+.++++|++|+++
T Consensus 4 ~l~-~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~---------~~~~~~~Dl~~~~~v 70 (252)
T PRK06079 4 ILS-GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DE---------EDLLVECDVASDESI 70 (252)
T ss_pred ccC-CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cC---------ceeEEeCCCCCHHHH
Confidence 356 8999999999 7999999999999999999999873 3333333322 11 27889999999999
Q ss_pred HHHhhh
Q 034737 79 ALAFLR 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
++++++
T Consensus 71 ~~~~~~ 76 (252)
T PRK06079 71 ERAFAT 76 (252)
T ss_pred HHHHHH
Confidence 988764
No 66
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.52 E-value=1.3e-13 Score=84.81 Aligned_cols=65 Identities=32% Similarity=0.399 Sum_probs=60.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
|++++|||++.|||++.+++|+++|.+|+++.|++++++.+.+++.+.++. + +.++..|+++.+.
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~v-e-------v~~i~~Dft~~~~ 113 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKV-E-------VRIIAIDFTKGDE 113 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCc-E-------EEEEEEecCCCch
Confidence 679999999999999999999999999999999999999999999998873 4 8999999997664
No 67
>PRK09186 flagellin modification protein A; Provisional
Probab=99.52 E-value=2e-13 Score=82.06 Aligned_cols=74 Identities=27% Similarity=0.339 Sum_probs=60.5
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +|+++|||+++|||+++++.|+++|++|++++|+++..+...+.+...... ..+.++.+|++|+++ .++
T Consensus 2 ~~-~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-------~~~~~~~~Dl~d~~~~~~~ 73 (256)
T PRK09186 2 LK-GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKS-------KKLSLVELDITDQESLEEF 73 (256)
T ss_pred CC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCC-------CceeEEEecCCCHHHHHHH
Confidence 45 899999999999999999999999999999999988777777666433211 126678999999999 888
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
++.
T Consensus 74 ~~~ 76 (256)
T PRK09186 74 LSK 76 (256)
T ss_pred HHH
Confidence 764
No 68
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.51 E-value=1.7e-13 Score=84.89 Aligned_cols=73 Identities=32% Similarity=0.409 Sum_probs=60.0
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
+|+ +|+++|||+++|||++++++|+++|++|++++++. ...+...+++...+.. +.++.+|++|+++ +
T Consensus 9 ~l~-~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~---------~~~~~~Dv~d~~~~~ 78 (306)
T PRK07792 9 DLS-GKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAK---------AVAVAGDISQRATAD 78 (306)
T ss_pred CCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCe---------EEEEeCCCCCHHHHH
Confidence 466 89999999999999999999999999999998754 4455666666544333 8899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 79 ~~~~~ 83 (306)
T PRK07792 79 ELVAT 83 (306)
T ss_pred HHHHH
Confidence 88764
No 69
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.51 E-value=1.3e-13 Score=84.93 Aligned_cols=71 Identities=31% Similarity=0.380 Sum_probs=59.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +++++|||+++|||+++++.|+++|++|++++|+.+.++.+.+++.. .. .+..+.+|++|+++ +++
T Consensus 7 l~-gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~---------~~~~~~~Dv~d~~~v~~~ 75 (296)
T PRK05872 7 LA-GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DD---------RVLTVVADVTDLAAMQAA 75 (296)
T ss_pred CC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CC---------cEEEEEecCCCHHHHHHH
Confidence 45 89999999999999999999999999999999998877776665532 11 26778899999999 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 76 ~~~ 78 (296)
T PRK05872 76 AEE 78 (296)
T ss_pred HHH
Confidence 764
No 70
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.51 E-value=2.1e-13 Score=82.26 Aligned_cols=71 Identities=34% Similarity=0.410 Sum_probs=56.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
|. +|+++|||+++|||++++++|+++|++|++++|++. .....+++...+.. +.++.+|++++++ .++
T Consensus 6 ~~-~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~ 74 (260)
T PRK12823 6 FA-GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGE---------ALALTADLETYAGAQAA 74 (260)
T ss_pred cC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCe---------EEEEEEeCCCHHHHHHH
Confidence 55 899999999999999999999999999999999853 33444444333323 7889999999998 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 75 ~~~ 77 (260)
T PRK12823 75 MAA 77 (260)
T ss_pred HHH
Confidence 764
No 71
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.51 E-value=2.1e-13 Score=83.39 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=55.6
Q ss_pred CCCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 1 MELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 1 ~~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
|.|. +|+++|||++ +|||++++++|+++|++|++++|+.. .....+.+...... -.++++|++|+++
T Consensus 1 ~~l~-~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~---------~~~~~~Dv~d~~~ 69 (274)
T PRK08415 1 MIMK-GKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGS---------DYVYELDVSKPEH 69 (274)
T ss_pred CccC-CcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCC---------ceEEEecCCCHHH
Confidence 6788 9999999997 79999999999999999999999853 22222233222111 1568999999999
Q ss_pred -HHHhhh
Q 034737 79 -ALAFLR 84 (85)
Q Consensus 79 -~~~~~~ 84 (85)
++++++
T Consensus 70 v~~~~~~ 76 (274)
T PRK08415 70 FKSLAES 76 (274)
T ss_pred HHHHHHH
Confidence 988765
No 72
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.50 E-value=2.4e-13 Score=82.18 Aligned_cols=71 Identities=20% Similarity=0.222 Sum_probs=59.0
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccc-hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEK-GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
+++++|||+++|||++++++|+++| ++|++++|+++. ++.+.+++...+.. ++.++.+|++|+++ ++++
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~--------~v~~~~~D~~~~~~~~~~~ 79 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGAS--------SVEVIDFDALDTDSHPKVI 79 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCC--------ceEEEEecCCChHHHHHHH
Confidence 7899999999999999999999985 899999999875 77777777654321 28899999999998 8776
Q ss_pred hh
Q 034737 83 LR 84 (85)
Q Consensus 83 ~~ 84 (85)
++
T Consensus 80 ~~ 81 (253)
T PRK07904 80 DA 81 (253)
T ss_pred HH
Confidence 53
No 73
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.50 E-value=2.6e-13 Score=81.27 Aligned_cols=72 Identities=18% Similarity=0.228 Sum_probs=60.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||+++|||++++++|+++|++|++++|+++..+.....+....+. .++.++.+|++++++ .+++++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~ 74 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPG-------IKVAVAALDVNDHDQVFEVFAE 74 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCC-------ceEEEEEcCCCCHHHHHHHHHH
Confidence 689999999999999999999999999999999988777776666544222 238899999999998 887764
No 74
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.50 E-value=2.8e-13 Score=80.80 Aligned_cols=72 Identities=36% Similarity=0.487 Sum_probs=60.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +++++|||++++||.+++++|+.+|++|++++|+.+..+....++...+.. +.++.+|++++++ .++
T Consensus 5 ~~-~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~ 74 (239)
T PRK07666 5 LQ-GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVK---------VVIATADVSDYEEVTAA 74 (239)
T ss_pred CC-CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCe---------EEEEECCCCCHHHHHHH
Confidence 55 789999999999999999999999999999999987776666666433323 8899999999999 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 75 ~~~ 77 (239)
T PRK07666 75 IEQ 77 (239)
T ss_pred HHH
Confidence 753
No 75
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.50 E-value=1.7e-13 Score=82.61 Aligned_cols=71 Identities=28% Similarity=0.378 Sum_probs=59.2
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|.+. +++++|||++++||.++++.|+++|++|++++|+.+..+.....+. .. +.++.+|++|+++ +
T Consensus 2 ~~l~-~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~---------~~~~~~D~~~~~~~~ 68 (257)
T PRK07067 2 MRLQ-GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG---PA---------AIAVSLDVTRQDSID 68 (257)
T ss_pred CCCC-CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC---Cc---------eEEEEccCCCHHHHH
Confidence 4567 8999999999999999999999999999999999876666544431 22 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 69 ~~~~~ 73 (257)
T PRK07067 69 RIVAA 73 (257)
T ss_pred HHHHH
Confidence 87764
No 76
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.50 E-value=2.4e-13 Score=82.35 Aligned_cols=71 Identities=24% Similarity=0.355 Sum_probs=54.6
Q ss_pred CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCcc---chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737 2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEE---KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT 76 (85)
Q Consensus 2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~ 76 (85)
++. +|+++|||++ +|||++++++|+++|++|++++|+.. .++++.+++. +. ++.++++|++|+
T Consensus 4 ~~~-~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~---------~~~~~~~Dv~d~ 71 (257)
T PRK08594 4 SLE-GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQ---------ESLLLPCDVTSD 71 (257)
T ss_pred ccC-CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CC---------ceEEEecCCCCH
Confidence 456 8999999997 89999999999999999999987642 2233222221 12 278899999999
Q ss_pred HH-HHHhhh
Q 034737 77 KF-ALAFLR 84 (85)
Q Consensus 77 ~~-~~~~~~ 84 (85)
++ ++++++
T Consensus 72 ~~v~~~~~~ 80 (257)
T PRK08594 72 EEITACFET 80 (257)
T ss_pred HHHHHHHHH
Confidence 99 988764
No 77
>PLN02253 xanthoxin dehydrogenase
Probab=99.50 E-value=1.9e-13 Score=83.34 Aligned_cols=71 Identities=35% Similarity=0.528 Sum_probs=58.1
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +|+++|||+++|||++++++|+++|++|++++++.+..+....++.. . .++.++++|++|+++ +++
T Consensus 16 l~-~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~Dl~d~~~~~~~ 84 (280)
T PLN02253 16 LL-GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-E---------PNVCFFHCDVTVEDDVSRA 84 (280)
T ss_pred cC-CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-C---------CceEEEEeecCCHHHHHHH
Confidence 55 89999999999999999999999999999999987666555544421 1 228899999999999 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
++.
T Consensus 85 ~~~ 87 (280)
T PLN02253 85 VDF 87 (280)
T ss_pred HHH
Confidence 763
No 78
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.50 E-value=2.8e-13 Score=80.98 Aligned_cols=70 Identities=33% Similarity=0.384 Sum_probs=60.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||++++||.+++++|+++|++|++++|++++.+...+.+...+.. +.++.+|++++++ ++++++
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~~ 77 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR---------AHAIAADLADPASVQRFFDA 77 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHHHHHH
Confidence 899999999999999999999999999999999988777777666544333 8899999999999 887754
No 79
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.50 E-value=1.7e-13 Score=85.17 Aligned_cols=70 Identities=20% Similarity=0.176 Sum_probs=58.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+|+++|||+++|||+++++.|+.+| ++|++++|+.++.+.+.+++.... ..+.++.+|+++.++ +++++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~---------~~~~~~~~Dl~~~~~v~~~~~ 73 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPK---------DSYTIMHLDLGSLDSVRQFVQ 73 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCC---------CeEEEEEcCCCCHHHHHHHHH
Confidence 7899999999999999999999999 999999999877776666553222 227889999999999 88876
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
+
T Consensus 74 ~ 74 (314)
T TIGR01289 74 Q 74 (314)
T ss_pred H
Confidence 4
No 80
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.50 E-value=2.8e-13 Score=82.10 Aligned_cols=71 Identities=24% Similarity=0.174 Sum_probs=54.6
Q ss_pred CCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 3 LKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 3 l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|. +|+++|||+++ |||++++++|+++|++|++.+|+. ..+...+++...... ..++++|++|+++ +
T Consensus 6 ~~-~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~---------~~~~~~Dv~~~~~v~ 74 (260)
T PRK06603 6 LQ-GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC---------NFVSELDVTNPKSIS 74 (260)
T ss_pred cC-CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC---------ceEEEccCCCHHHHH
Confidence 45 89999999997 999999999999999999998874 333334444332211 3467899999999 9
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 75 ~~~~~ 79 (260)
T PRK06603 75 NLFDD 79 (260)
T ss_pred HHHHH
Confidence 88764
No 81
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.50 E-value=2.7e-13 Score=82.12 Aligned_cols=74 Identities=23% Similarity=0.357 Sum_probs=56.7
Q ss_pred CCCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737 1 MELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT 76 (85)
Q Consensus 1 ~~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~ 76 (85)
|+|. +|+++|||++ +|||++++++|++.|++|++.+++.+ ..+...+++...... +.++++|++|+
T Consensus 2 ~~l~-~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~d~ 71 (258)
T PRK07370 2 LDLT-GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNP---------SLFLPCDVQDD 71 (258)
T ss_pred cccC-CcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCc---------ceEeecCcCCH
Confidence 3567 8999999986 89999999999999999988876543 234444444433222 67899999999
Q ss_pred HH-HHHhhh
Q 034737 77 KF-ALAFLR 84 (85)
Q Consensus 77 ~~-~~~~~~ 84 (85)
++ ++++++
T Consensus 72 ~~v~~~~~~ 80 (258)
T PRK07370 72 AQIEETFET 80 (258)
T ss_pred HHHHHHHHH
Confidence 99 988764
No 82
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.50 E-value=3.3e-13 Score=81.16 Aligned_cols=72 Identities=32% Similarity=0.398 Sum_probs=61.5
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +++++|||++++||++++++|+++|++|++++|++++++.+..++...+.. +.++.+|++++++ .++
T Consensus 7 ~~-~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~~ 76 (258)
T PRK06949 7 LE-GKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGA---------AHVVSLDVTDYQSIKAA 76 (258)
T ss_pred CC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHHHH
Confidence 55 899999999999999999999999999999999988877777766544333 8899999999998 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 77 ~~~ 79 (258)
T PRK06949 77 VAH 79 (258)
T ss_pred HHH
Confidence 653
No 83
>PRK05599 hypothetical protein; Provisional
Probab=99.49 E-value=2.3e-13 Score=81.85 Aligned_cols=69 Identities=19% Similarity=0.244 Sum_probs=58.4
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
|+++|||+++|||++++++|+ +|++|++++|++++++.+.+++...+.. .+.++.+|++|+++ ++++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~--------~~~~~~~Dv~d~~~v~~~~~~ 70 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGAT--------SVHVLSFDAQDLDTHRELVKQ 70 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCC--------ceEEEEcccCCHHHHHHHHHH
Confidence 479999999999999999999 5999999999998888887777654321 27789999999999 888764
No 84
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.49 E-value=1.8e-13 Score=82.61 Aligned_cols=69 Identities=29% Similarity=0.350 Sum_probs=56.9
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
.++++|||+++|||.+++++|+++|++|++++|+.+.++...+++...+ ++.++.+|++++++ .+++++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~Dl~~~~~i~~~~~~ 71 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA----------RVSVYAADVRDADALAAAAAD 71 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC----------eeEEEEcCCCCHHHHHHHHHH
Confidence 5789999999999999999999999999999999876665555443211 28899999999999 887654
No 85
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.49 E-value=3e-13 Score=81.03 Aligned_cols=72 Identities=31% Similarity=0.447 Sum_probs=59.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEE-EecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTV-VDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
|. +++++|||++++||++++++|+++|++|++ ..|+.++.+...+++...+.. +.++.+|++|+++ .+
T Consensus 2 ~~-~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~ 71 (250)
T PRK08063 2 FS-GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRK---------ALAVKANVGDVEKIKE 71 (250)
T ss_pred CC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHHH
Confidence 45 789999999999999999999999999876 467777777766666544433 8899999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 72 ~~~~ 75 (250)
T PRK08063 72 MFAQ 75 (250)
T ss_pred HHHH
Confidence 7764
No 86
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.49 E-value=3.3e-13 Score=80.66 Aligned_cols=70 Identities=39% Similarity=0.493 Sum_probs=59.7
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||++++||.+++++|+++|++|++++|+.+........+...+.. +.++.+|++|+++ .+++++
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~~~~~~ 76 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGK---------ARARQVDVRDRAALKAAVAA 76 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHHHHHH
Confidence 889999999999999999999999999999999987766666666544433 8899999999998 887753
No 87
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.49 E-value=2.9e-13 Score=82.60 Aligned_cols=71 Identities=20% Similarity=0.328 Sum_probs=54.4
Q ss_pred CCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 3 LKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 3 l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+ +|+++|||+++ |||++++++|+++|++|++++|+....+.. +++...... ..++++|++|+++ +
T Consensus 5 l~-~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~-~~~~~~~g~---------~~~~~~Dv~d~~~v~ 73 (271)
T PRK06505 5 MQ-GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRV-KPLAESLGS---------DFVLPCDVEDIASVD 73 (271)
T ss_pred cC-CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHH-HHHHHhcCC---------ceEEeCCCCCHHHHH
Confidence 56 89999999996 999999999999999999999875433332 223222111 3578999999999 9
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 74 ~~~~~ 78 (271)
T PRK06505 74 AVFEA 78 (271)
T ss_pred HHHHH
Confidence 88765
No 88
>PRK06196 oxidoreductase; Provisional
Probab=99.48 E-value=3.6e-13 Score=83.56 Aligned_cols=68 Identities=29% Similarity=0.328 Sum_probs=57.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +|+++|||+++|||++++++|+.+|++|++++|+.+..+....++. . +.++.+|++|.++ +++
T Consensus 24 l~-~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~---------v~~~~~Dl~d~~~v~~~ 89 (315)
T PRK06196 24 LS-GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----G---------VEVVMLDLADLESVRAF 89 (315)
T ss_pred CC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----h---------CeEEEccCCCHHHHHHH
Confidence 45 8999999999999999999999999999999999876666554442 2 6789999999999 888
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 90 ~~~ 92 (315)
T PRK06196 90 AER 92 (315)
T ss_pred HHH
Confidence 764
No 89
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.48 E-value=4.6e-13 Score=80.13 Aligned_cols=70 Identities=34% Similarity=0.474 Sum_probs=60.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||++++||.+++++|+++|+.|++++|+.+..+.+...+...+.. +.++.+|+++.++ ++++++
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~d~~~~~~~~~~~~~ 73 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGN---------AQAFACDITDRDSVDTAVAA 73 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHHHHHH
Confidence 889999999999999999999999999999999987777776666544333 8899999999999 887653
No 90
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.48 E-value=4.8e-13 Score=79.82 Aligned_cols=73 Identities=33% Similarity=0.492 Sum_probs=61.3
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF- 78 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 78 (85)
|+|. +++++|||++++||.+++++|+++|++|+++ .|+++..+.....+...+.. +.++.+|++++++
T Consensus 1 ~~~~-~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~ 70 (247)
T PRK05565 1 MKLM-GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGD---------AIAVKADVSSEEDV 70 (247)
T ss_pred CCCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHH
Confidence 6778 8999999999999999999999999999998 88877766666665543333 8899999999999
Q ss_pred HHHhh
Q 034737 79 ALAFL 83 (85)
Q Consensus 79 ~~~~~ 83 (85)
.++++
T Consensus 71 ~~~~~ 75 (247)
T PRK05565 71 ENLVE 75 (247)
T ss_pred HHHHH
Confidence 88765
No 91
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.48 E-value=5.6e-13 Score=80.47 Aligned_cols=72 Identities=26% Similarity=0.395 Sum_probs=57.6
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+|. +++++|||++++||++++++|+++|++|++++|+.. .....+.+...+.. +.++.+|++++++ ++
T Consensus 3 ~~~-~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~~ 71 (263)
T PRK08226 3 KLT-GKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHR---------CTAVVADVRDPASVAA 71 (263)
T ss_pred CCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCc---------eEEEECCCCCHHHHHH
Confidence 456 899999999999999999999999999999999864 33344444333323 7889999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 72 ~~~~ 75 (263)
T PRK08226 72 AIKR 75 (263)
T ss_pred HHHH
Confidence 8764
No 92
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.48 E-value=3.3e-13 Score=81.50 Aligned_cols=67 Identities=18% Similarity=0.234 Sum_probs=57.7
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++|||+++|||++++++|+++|++|++++|+++..+...+++.... . +.++.+|++|+++ ++++++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~---------~~~~~~Dv~d~~~~~~~~~~ 69 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-E---------VYAVKADLSDKDDLKNLVKE 69 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-C---------ceEEEcCCCCHHHHHHHHHH
Confidence 69999999999999999999999999999999887777777665322 2 7889999999999 888764
No 93
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.48 E-value=5.4e-13 Score=79.41 Aligned_cols=73 Identities=22% Similarity=0.285 Sum_probs=60.5
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+++ +++++|||++++||..+++.|+++|++|++++|+++..+.+.+.+... .. +.++++|++++++ +
T Consensus 1 ~~~~-~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~---------~~~~~~Dl~~~~~~~ 69 (238)
T PRK05786 1 MRLK-GKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GN---------IHYVVGDVSSTESAR 69 (238)
T ss_pred CCcC-CcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CC---------eEEEECCCCCHHHHH
Confidence 6778 899999999999999999999999999999999987666554544322 12 7889999999998 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 70 ~~~~~ 74 (238)
T PRK05786 70 NVIEK 74 (238)
T ss_pred HHHHH
Confidence 77653
No 94
>PRK05717 oxidoreductase; Validated
Probab=99.48 E-value=2.9e-13 Score=81.52 Aligned_cols=70 Identities=34% Similarity=0.471 Sum_probs=56.4
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +|+++|||++++||++++++|+++|++|++++++....+...+.+ ... +.++.+|++++++ .+
T Consensus 7 ~~~-~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~---------~~~~~~Dl~~~~~~~~ 73 (255)
T PRK05717 7 GHN-GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GEN---------AWFIAMDVADEAQVAA 73 (255)
T ss_pred ccC-CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCc---------eEEEEccCCCHHHHHH
Confidence 356 899999999999999999999999999999998876554443322 122 7899999999998 87
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 74 ~~~~ 77 (255)
T PRK05717 74 GVAE 77 (255)
T ss_pred HHHH
Confidence 7654
No 95
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.47 E-value=5e-13 Score=83.37 Aligned_cols=63 Identities=27% Similarity=0.420 Sum_probs=54.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN 75 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~ 75 (85)
|++++|||+++|||++++++|+++|++|++++|++++++...+++...++.. ++..+.+|+++
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~-------~~~~~~~Dl~~ 115 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKT-------QIKTVVVDFSG 115 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCc-------EEEEEEEECCC
Confidence 7899999999999999999999999999999999998888888886554321 27888999985
No 96
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.47 E-value=6.5e-13 Score=80.06 Aligned_cols=72 Identities=24% Similarity=0.353 Sum_probs=56.6
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||+++|||++++++|++.|++|+++++.. .+...+.+...+.. +.++++|++|.++ +
T Consensus 6 ~~l~-~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~ 73 (253)
T PRK08993 6 FSLE-GKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRR---------FLSLTADLRKIDGIP 73 (253)
T ss_pred cCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCe---------EEEEECCCCCHHHHH
Confidence 3566 89999999999999999999999999999887754 23334444332222 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 74 ~~~~~ 78 (253)
T PRK08993 74 ALLER 78 (253)
T ss_pred HHHHH
Confidence 88764
No 97
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.47 E-value=8.1e-13 Score=79.14 Aligned_cols=72 Identities=32% Similarity=0.420 Sum_probs=57.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
|. +++++|||+++|||++++++|+.+|++|++++|+.+ ..+.....+...+.. +.++.+|++++++ .+
T Consensus 4 ~~-~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~ 73 (248)
T PRK07806 4 LP-GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGR---------ASAVGADLTDEESVAA 73 (248)
T ss_pred CC-CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCc---------eEEEEcCCCCHHHHHH
Confidence 55 899999999999999999999999999999988753 344555555433322 7889999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 74 ~~~~ 77 (248)
T PRK07806 74 LMDT 77 (248)
T ss_pred HHHH
Confidence 7653
No 98
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.47 E-value=6.2e-13 Score=80.64 Aligned_cols=71 Identities=21% Similarity=0.295 Sum_probs=53.9
Q ss_pred CCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 3 LKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 3 l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|. +|+++|||+ ++|||++++++|+++|++|++++|+. +.+...+++...... ..++++|++|+++ +
T Consensus 4 ~~-~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~v~ 72 (261)
T PRK08690 4 LQ-GKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS---------ELVFRCDVASDDEIN 72 (261)
T ss_pred cC-CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC---------ceEEECCCCCHHHHH
Confidence 45 899999997 67999999999999999999988764 233333333322222 4678999999999 9
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 73 ~~~~~ 77 (261)
T PRK08690 73 QVFAD 77 (261)
T ss_pred HHHHH
Confidence 88764
No 99
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.47 E-value=2.5e-13 Score=80.75 Aligned_cols=76 Identities=49% Similarity=0.640 Sum_probs=62.3
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. ||++++||+.+|||+++++.|+.+|.++.+++-+.++ .++...+++.++. .++.|++||+++..+ +
T Consensus 1 m~~t-GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~-------~~v~F~~~DVt~~~~~~ 71 (261)
T KOG4169|consen 1 MDLT-GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPS-------VSVIFIKCDVTNRGDLE 71 (261)
T ss_pred Cccc-CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCC-------ceEEEEEeccccHHHHH
Confidence 6788 9999999999999999999999999988777766665 3444556655544 349999999999999 9
Q ss_pred HHhhhC
Q 034737 80 LAFLRL 85 (85)
Q Consensus 80 ~~~~~~ 85 (85)
+.++++
T Consensus 72 ~~f~ki 77 (261)
T KOG4169|consen 72 AAFDKI 77 (261)
T ss_pred HHHHHH
Confidence 988763
No 100
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.47 E-value=7.2e-13 Score=79.12 Aligned_cols=74 Identities=30% Similarity=0.407 Sum_probs=59.0
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF- 78 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 78 (85)
|++. +++++|||++++||++++++|+++|++++++.++.. ..+...+.+...+.. +.++.+|++++++
T Consensus 1 ~~~~-~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~ 70 (245)
T PRK12937 1 MTLS-NKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGR---------AIAVQADVADAAAV 70 (245)
T ss_pred CCCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHH
Confidence 6778 999999999999999999999999999988876543 344455555433333 8899999999999
Q ss_pred HHHhhh
Q 034737 79 ALAFLR 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
++++++
T Consensus 71 ~~~~~~ 76 (245)
T PRK12937 71 TRLFDA 76 (245)
T ss_pred HHHHHH
Confidence 888764
No 101
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.46 E-value=7.3e-13 Score=80.52 Aligned_cols=75 Identities=27% Similarity=0.352 Sum_probs=60.4
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||++++||.+++++|+++|++|++++|+++..+....++..... ..++.++.+|++++++ .
T Consensus 3 ~~~~-~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~~Dl~~~~~~~ 74 (276)
T PRK05875 3 LSFQ-DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKG-------AGAVRYEPADVTDEDQVA 74 (276)
T ss_pred cCCC-CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccC-------CCceEEEEcCCCCHHHHH
Confidence 3456 89999999999999999999999999999999998776666655543321 1228899999999998 8
Q ss_pred HHhh
Q 034737 80 LAFL 83 (85)
Q Consensus 80 ~~~~ 83 (85)
++++
T Consensus 75 ~~~~ 78 (276)
T PRK05875 75 RAVD 78 (276)
T ss_pred HHHH
Confidence 7765
No 102
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.46 E-value=8.1e-13 Score=78.62 Aligned_cols=72 Identities=29% Similarity=0.373 Sum_probs=60.0
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
.+. +++++|||++++||.+++++|+.+|++|++++|+++......+.+... .. +.++.+|+++.++ .+
T Consensus 3 ~~~-~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~---------~~~~~~D~~~~~~~~~ 71 (237)
T PRK07326 3 SLK-GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GN---------VLGLAADVRDEADVQR 71 (237)
T ss_pred CCC-CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-Cc---------EEEEEccCCCHHHHHH
Confidence 455 899999999999999999999999999999999987776666665432 22 8899999999998 87
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 72 ~~~~ 75 (237)
T PRK07326 72 AVDA 75 (237)
T ss_pred HHHH
Confidence 7653
No 103
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.46 E-value=9.6e-13 Score=79.52 Aligned_cols=73 Identities=27% Similarity=0.428 Sum_probs=58.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
++. +|+++|||++++||.+++++|+++|++|+++.++. +..+.....+...+.. +.++.+|++|.++ .
T Consensus 4 ~~~-~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~i~ 73 (261)
T PRK08936 4 DLE-GKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGE---------AIAVKGDVTVESDVV 73 (261)
T ss_pred CCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCe---------EEEEEecCCCHHHHH
Confidence 356 89999999999999999999999999999888854 3455555555443333 7899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 74 ~~~~~ 78 (261)
T PRK08936 74 NLIQT 78 (261)
T ss_pred HHHHH
Confidence 87653
No 104
>PRK06128 oxidoreductase; Provisional
Probab=99.45 E-value=9.3e-13 Score=81.24 Aligned_cols=72 Identities=36% Similarity=0.535 Sum_probs=56.8
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|. +|+++|||+++|||++++++|+++|++|++++++.+ ..+...+.+...+.. +.++.+|++++++ +
T Consensus 53 l~-~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~v~ 122 (300)
T PRK06128 53 LQ-GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRK---------AVALPGDLKDEAFCR 122 (300)
T ss_pred cC-CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCe---------EEEEecCCCCHHHHH
Confidence 45 799999999999999999999999999998887643 334444444433333 7899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 123 ~~~~~ 127 (300)
T PRK06128 123 QLVER 127 (300)
T ss_pred HHHHH
Confidence 88764
No 105
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.45 E-value=9.1e-13 Score=78.84 Aligned_cols=70 Identities=19% Similarity=0.142 Sum_probs=58.0
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
|+++|||+++|||.+++++|+++|++|++++|+++..+...+.+..... .++.++++|++++++ ++++++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~--------~~~~~~~~Dl~~~~~~~~~~~~ 72 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA--------VAVSTHELDILDTASHAAFLDS 72 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcC--------CeEEEEecCCCChHHHHHHHHH
Confidence 5899999999999999999999999999999998777666665543321 238899999999998 887654
No 106
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.45 E-value=1.1e-12 Score=79.04 Aligned_cols=72 Identities=28% Similarity=0.280 Sum_probs=59.0
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||++++||.+++++|+++|++|++++|+....+...+.+...... .++.++.+|+++.++ .+++++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~i~~~~~~ 74 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGE-------GMAYGFGADATSEQSVLALSRG 74 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCC-------ceeEEEEccCCCHHHHHHHHHH
Confidence 689999999999999999999999999999999987776666655543221 128899999999998 877654
No 107
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.45 E-value=9.4e-13 Score=78.13 Aligned_cols=72 Identities=22% Similarity=0.250 Sum_probs=58.4
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +|+++|||++++||++++++|+++|++|++++|+++......+.+... . +.++.+|+.|.++ .
T Consensus 3 ~~~~-~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~---------~~~~~~D~~~~~~~~ 70 (239)
T PRK12828 3 HSLQ-GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--A---------LRIGGIDLVDPQAAR 70 (239)
T ss_pred CCCC-CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--C---------ceEEEeecCCHHHHH
Confidence 4566 899999999999999999999999999999999887665554444322 2 5678899999998 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 71 ~~~~~ 75 (239)
T PRK12828 71 RAVDE 75 (239)
T ss_pred HHHHH
Confidence 87763
No 108
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.45 E-value=7.5e-13 Score=88.50 Aligned_cols=72 Identities=29% Similarity=0.412 Sum_probs=62.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +|+++|||+++|||++++++|+++|++|++++|+++.++...+++...+.. +.++.+|++|.++ +++
T Consensus 369 ~~-~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~~~~~ 438 (657)
T PRK07201 369 LV-GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGT---------AHAYTCDLTDSAAVDHT 438 (657)
T ss_pred CC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCc---------EEEEEecCCCHHHHHHH
Confidence 45 889999999999999999999999999999999988887777777554433 8899999999999 888
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 439 ~~~ 441 (657)
T PRK07201 439 VKD 441 (657)
T ss_pred HHH
Confidence 764
No 109
>PRK05855 short chain dehydrogenase; Validated
Probab=99.45 E-value=7.8e-13 Score=86.86 Aligned_cols=72 Identities=32% Similarity=0.396 Sum_probs=62.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +++++|||+++|||++++++|+.+|++|++++|+.+..+.+.+.+...+.. +.++.+|++|+++ .++
T Consensus 313 ~~-~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dv~~~~~~~~~ 382 (582)
T PRK05855 313 FS-GKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAV---------AHAYRVDVSDADAMEAF 382 (582)
T ss_pred CC-CCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHHHH
Confidence 44 789999999999999999999999999999999988888877777655444 8899999999999 888
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 383 ~~~ 385 (582)
T PRK05855 383 AEW 385 (582)
T ss_pred HHH
Confidence 764
No 110
>PRK07985 oxidoreductase; Provisional
Probab=99.45 E-value=1e-12 Score=81.01 Aligned_cols=72 Identities=36% Similarity=0.523 Sum_probs=56.1
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc--cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE--EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
+. +|+++|||+++|||++++++|+++|++|++++++. +..+.+.+.+...+.. +.++.+|++++++ .
T Consensus 47 ~~-~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~ 116 (294)
T PRK07985 47 LK-DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRK---------AVLLPGDLSDEKFAR 116 (294)
T ss_pred cC-CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCe---------EEEEEccCCCHHHHH
Confidence 45 78999999999999999999999999999987653 3344444444333222 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 117 ~~~~~ 121 (294)
T PRK07985 117 SLVHE 121 (294)
T ss_pred HHHHH
Confidence 87764
No 111
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.1e-12 Score=78.83 Aligned_cols=72 Identities=29% Similarity=0.471 Sum_probs=56.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
|. +++++|||++++||.+++++|+++|++|++. .|+.+..+.....+...+.. +.++.+|++|+++ .+
T Consensus 4 ~~-~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~d~~~i~~ 73 (254)
T PRK12746 4 LD-GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGK---------AFLIEADLNSIDGVKK 73 (254)
T ss_pred CC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc---------EEEEEcCcCCHHHHHH
Confidence 45 7899999999999999999999999998775 57766555555555432222 7889999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 74 ~~~~ 77 (254)
T PRK12746 74 LVEQ 77 (254)
T ss_pred HHHH
Confidence 7663
No 112
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.44 E-value=6.7e-13 Score=79.85 Aligned_cols=66 Identities=27% Similarity=0.381 Sum_probs=55.0
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +|+++|||+++|||++++++|+.+|++|++++|+.+. ...... +.++++|++++++ +
T Consensus 2 ~~~~-~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~---------~~~~~~D~~~~~~~~ 63 (252)
T PRK07856 2 LDLT-GRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRP---------AEFHAADVRDPDQVA 63 (252)
T ss_pred CCCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCc---------eEEEEccCCCHHHHH
Confidence 5677 9999999999999999999999999999999998653 111122 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 64 ~~~~~ 68 (252)
T PRK07856 64 ALVDA 68 (252)
T ss_pred HHHHH
Confidence 87754
No 113
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.1e-12 Score=79.92 Aligned_cols=70 Identities=29% Similarity=0.303 Sum_probs=57.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+|+++|||++++||+++++.|+.+|++|++++|+.+..+...+++...+.. .++.++.+|++|+++ ++ ++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~d~~~~~~-~~ 73 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQ-------QNIKVQQLDVTDQNSIHN-FQ 73 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCC-------CceeEEecCCCCHHHHHH-HH
Confidence 789999999999999999999999999999999987776766555433211 228899999999998 76 44
No 114
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.44 E-value=1.1e-12 Score=80.08 Aligned_cols=71 Identities=17% Similarity=0.184 Sum_probs=53.5
Q ss_pred CCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 3 LKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 3 l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|. +|+++|||++ +|||++++++|+++|++|++++|+.. ..+..+++...... ..++++|++|+++ +
T Consensus 8 ~~-~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~v~ 76 (272)
T PRK08159 8 MA-GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGA---------FVAGHCDVTDEASID 76 (272)
T ss_pred cc-CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCC---------ceEEecCCCCHHHHH
Confidence 44 8999999997 89999999999999999999888642 22222233222122 5678999999999 9
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 77 ~~~~~ 81 (272)
T PRK08159 77 AVFET 81 (272)
T ss_pred HHHHH
Confidence 88765
No 115
>PRK12743 oxidoreductase; Provisional
Probab=99.44 E-value=1.1e-12 Score=79.10 Aligned_cols=70 Identities=30% Similarity=0.324 Sum_probs=57.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+|+++|||+++|||++++++|+++|++|+++++ +.+..+...+++...+.. +.++.+|++++++ +++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~ 72 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVR---------AEIRQLDLSDLPEGAQALD 72 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCc---------eEEEEccCCCHHHHHHHHH
Confidence 679999999999999999999999999988865 445566666666544333 8899999999999 88876
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
+
T Consensus 73 ~ 73 (256)
T PRK12743 73 K 73 (256)
T ss_pred H
Confidence 4
No 116
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.44 E-value=1.2e-12 Score=78.93 Aligned_cols=74 Identities=23% Similarity=0.264 Sum_probs=56.2
Q ss_pred CCCCCCcEEEEecCCC--hHHHHHHHHHHhCCCEEEEEecCc-----------cchHHHHHHHHHHhhhccCCCCCCceE
Q 034737 1 MELKPGLSAFVTGGAS--GIGRALSLALAGKGVFVTVVDLSE-----------EKGNEVAALVEKENAKFHSNLGFPSAM 67 (85)
Q Consensus 1 ~~l~~~~~~litG~~~--gig~~~~~~l~~~g~~v~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~ 67 (85)
|++. +|+++|||+++ |||.+++++|+.+|++|++++|++ ........++...+. ++.
T Consensus 1 ~~l~-~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 70 (256)
T PRK12748 1 LPLM-KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGV---------RCE 70 (256)
T ss_pred CCCC-CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCC---------eEE
Confidence 6788 89999999984 899999999999999999999872 111123333322222 288
Q ss_pred EEEecCCCHHH-HHHhhh
Q 034737 68 FIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 68 ~~~~Dv~~~~~-~~~~~~ 84 (85)
++.+|+++.++ .+++++
T Consensus 71 ~~~~D~~~~~~~~~~~~~ 88 (256)
T PRK12748 71 HMEIDLSQPYAPNRVFYA 88 (256)
T ss_pred EEECCCCCHHHHHHHHHH
Confidence 99999999999 887764
No 117
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.5e-12 Score=80.18 Aligned_cols=73 Identities=41% Similarity=0.598 Sum_probs=57.6
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
.+. +|+++|||++++||.+++++|+++|++|++++++.. ..+.....+...+.. +.++.+|+++.++ .
T Consensus 43 ~~~-~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~ 112 (290)
T PRK06701 43 KLK-GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVK---------CLLIPGDVSDEAFCK 112 (290)
T ss_pred CCC-CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCe---------EEEEEccCCCHHHHH
Confidence 455 899999999999999999999999999999998764 344444444333323 8899999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 113 ~~~~~ 117 (290)
T PRK06701 113 DAVEE 117 (290)
T ss_pred HHHHH
Confidence 87754
No 118
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.44 E-value=8.2e-13 Score=79.18 Aligned_cols=71 Identities=28% Similarity=0.448 Sum_probs=55.4
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF- 78 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 78 (85)
|++. +|+++|||+++|||++++++|+++|++|++++++ .+..+.+...+ ... +.++++|++++++
T Consensus 1 ~~l~-~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~ 67 (253)
T PRK08642 1 MQIS-EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDR---------AIALQADVTDREQV 67 (253)
T ss_pred CCCC-CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCc---------eEEEEcCCCCHHHH
Confidence 7788 8999999999999999999999999999887654 33333332222 112 8899999999999
Q ss_pred HHHhhh
Q 034737 79 ALAFLR 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
++++++
T Consensus 68 ~~~~~~ 73 (253)
T PRK08642 68 QAMFAT 73 (253)
T ss_pred HHHHHH
Confidence 887764
No 119
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.5e-12 Score=78.55 Aligned_cols=73 Identities=26% Similarity=0.396 Sum_probs=55.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc----cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE----EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK 77 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 77 (85)
.+. +|+++|||+++|||.+++++|+++|++|++++++. +..+...+++...+.. +.++++|+++++
T Consensus 5 ~l~-~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~ 74 (257)
T PRK12744 5 SLK-GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAK---------AVAFQADLTTAA 74 (257)
T ss_pred CCC-CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCc---------EEEEecCcCCHH
Confidence 356 89999999999999999999999999977665433 2333444444333223 889999999999
Q ss_pred H-HHHhhh
Q 034737 78 F-ALAFLR 84 (85)
Q Consensus 78 ~-~~~~~~ 84 (85)
+ ++++++
T Consensus 75 ~~~~~~~~ 82 (257)
T PRK12744 75 AVEKLFDD 82 (257)
T ss_pred HHHHHHHH
Confidence 9 888764
No 120
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.44 E-value=1.7e-12 Score=77.32 Aligned_cols=74 Identities=32% Similarity=0.418 Sum_probs=58.4
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF- 78 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 78 (85)
|+|. +++++|||++++||.+++++|+++|++|+++.++.. ..+....++...+.. +.++.+|++++++
T Consensus 1 ~~~~-~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~ 70 (248)
T PRK05557 1 MSLE-GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGK---------ALAVQGDVSDAESV 70 (248)
T ss_pred CCCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCc---------eEEEEcCCCCHHHH
Confidence 6777 899999999999999999999999999988877654 344444444433333 8899999999998
Q ss_pred HHHhhh
Q 034737 79 ALAFLR 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
.+++++
T Consensus 71 ~~~~~~ 76 (248)
T PRK05557 71 ERAVDE 76 (248)
T ss_pred HHHHHH
Confidence 887653
No 121
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.2e-12 Score=78.73 Aligned_cols=70 Identities=26% Similarity=0.379 Sum_probs=56.0
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+|+++|||+++|||.+++++|++.|++|++.+ ++.+..+....++...+.. +..+.+|+++.++ ..+++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~ 74 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGS---------AFSIGANLESLHGVEALYS 74 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCc---------eEEEecccCCHHHHHHHHH
Confidence 89999999999999999999999999998875 5556666666555543333 7789999999988 77665
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
.
T Consensus 75 ~ 75 (252)
T PRK12747 75 S 75 (252)
T ss_pred H
Confidence 3
No 122
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.44 E-value=1.6e-12 Score=78.55 Aligned_cols=72 Identities=26% Similarity=0.283 Sum_probs=59.1
Q ss_pred CcEEEEecCCC-hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGAS-GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~-gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+|+++|||+++ |||+++++.|+.+|++|++++++.++.+...+.+....+. .++.++++|++++++ +++++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGL-------GRVEAVVCDVTSEAQVDALID 89 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCC-------ceEEEEEccCCCHHHHHHHHH
Confidence 79999999985 9999999999999999999999887777776666543221 127889999999999 88776
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
+
T Consensus 90 ~ 90 (262)
T PRK07831 90 A 90 (262)
T ss_pred H
Confidence 4
No 123
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.43 E-value=1.3e-12 Score=79.31 Aligned_cols=69 Identities=30% Similarity=0.512 Sum_probs=59.3
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++++|||+++|||++++++|+++|++|++++|+.+..+....++...+.. +.++.+|++++++ .++++.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~~~~~ 70 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGD---------GFYQRCDVRDYSQLTALAQA 70 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEEccCCCHHHHHHHHHH
Confidence 47999999999999999999999999999999988877777777654444 8899999999998 887653
No 124
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.43 E-value=1.4e-12 Score=79.73 Aligned_cols=68 Identities=21% Similarity=0.224 Sum_probs=56.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||+ +|||++++++|. +|++|++++|+.+.++...+++...+.. +.++++|++|+++ ++++++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dv~d~~~i~~~~~~ 70 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFD---------VSTQEVDVSSRESVKALAAT 70 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEeecCCHHHHHHHHHH
Confidence 689999998 699999999996 8999999999987777766666543333 8899999999999 888764
No 125
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.43 E-value=1.6e-12 Score=77.80 Aligned_cols=70 Identities=24% Similarity=0.333 Sum_probs=56.4
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
.+. +|+++|||++++||++++++|+++|++|++++|+.+..+...+++ +.. +.++++|+++.++ ..
T Consensus 3 ~~~-~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~ 69 (249)
T PRK06500 3 RLQ-GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GES---------ALVIRADAGDVAAQKA 69 (249)
T ss_pred CCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCc---------eEEEEecCCCHHHHHH
Confidence 456 899999999999999999999999999999999876555444333 222 7889999999988 77
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++.
T Consensus 70 ~~~~ 73 (249)
T PRK06500 70 LAQA 73 (249)
T ss_pred HHHH
Confidence 7653
No 126
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.43 E-value=1.4e-12 Score=78.25 Aligned_cols=69 Identities=36% Similarity=0.487 Sum_probs=58.4
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
|+++|||++++||.+++++|++.|++|++++|+++..+....++...+.. +.++.+|++|+++ .+++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~i~~~~~~ 70 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGK---------AVAYKLDVSDKDQVFSAIDQ 70 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHHHHHHH
Confidence 58999999999999999999999999999999987777766666544333 8899999999999 887653
No 127
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.43 E-value=7.5e-13 Score=80.09 Aligned_cols=69 Identities=25% Similarity=0.246 Sum_probs=54.1
Q ss_pred CCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCc--cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 3 LKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSE--EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 3 l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
+. +|+++|||+ ++|||++++++|+++|++|++++|+. +..+...+++. .. +.++.+|++|+++
T Consensus 5 ~~-~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~---~~---------~~~~~~Dv~~~~~ 71 (256)
T PRK07889 5 LE-GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP---EP---------APVLELDVTNEEH 71 (256)
T ss_pred cc-CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC---CC---------CcEEeCCCCCHHH
Confidence 56 899999999 89999999999999999999998764 22333333221 12 6789999999999
Q ss_pred -HHHhhh
Q 034737 79 -ALAFLR 84 (85)
Q Consensus 79 -~~~~~~ 84 (85)
++++++
T Consensus 72 i~~~~~~ 78 (256)
T PRK07889 72 LASLADR 78 (256)
T ss_pred HHHHHHH
Confidence 888764
No 128
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.43 E-value=2e-12 Score=78.00 Aligned_cols=70 Identities=29% Similarity=0.357 Sum_probs=55.9
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+|+++|||+++|||++++++|+++|++|+++++. .+..+.+...+...+.. +.++.+|++|.++ .++++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~d~~~~~~~~~ 79 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRR---------AVALQADLADEAEVRALVA 79 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCe---------EEEEEcCCCCHHHHHHHHH
Confidence 7899999999999999999999999999887664 44455555555433333 8899999999999 88775
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
+
T Consensus 80 ~ 80 (258)
T PRK09134 80 R 80 (258)
T ss_pred H
Confidence 3
No 129
>PRK06484 short chain dehydrogenase; Validated
Probab=99.43 E-value=1.3e-12 Score=85.53 Aligned_cols=71 Identities=28% Similarity=0.324 Sum_probs=59.6
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|.+. +|+++|||+++|||++++++|+++|++|++++|+.+.++...+++ +.. +.++.+|++++++ +
T Consensus 1 ~~~~-~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~ 67 (520)
T PRK06484 1 SKAQ-SRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPD---------HHALAMDVSDEAQIR 67 (520)
T ss_pred CCCC-CeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------eeEEEeccCCHHHHH
Confidence 4566 899999999999999999999999999999999987766655444 222 7789999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 68 ~~~~~ 72 (520)
T PRK06484 68 EGFEQ 72 (520)
T ss_pred HHHHH
Confidence 88764
No 130
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.42 E-value=1.6e-12 Score=77.94 Aligned_cols=70 Identities=37% Similarity=0.490 Sum_probs=58.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||++++||++++++|+++|++|++++|+.+..+.+..++...... +.++.+|++++++ .+++++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~~ 71 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGS---------VIYLVADVTKEDEIADMIAA 71 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------eEEEECCCCCHHHHHHHHHH
Confidence 468999999999999999999999999999999987776666665433333 8899999999998 777653
No 131
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.42 E-value=1.9e-12 Score=78.90 Aligned_cols=70 Identities=27% Similarity=0.326 Sum_probs=57.7
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
.|+++|||++++||++++++|+.+|++|++++|+.+..+.....+...+.. +.++.+|++++++ .+++++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~~ 80 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGE---------AVAFPLDVTDPDSVKSFVAQ 80 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHHHHHH
Confidence 679999999999999999999999999999999876666555555433333 8889999999999 887763
No 132
>PRK06398 aldose dehydrogenase; Validated
Probab=99.42 E-value=1.2e-12 Score=79.27 Aligned_cols=62 Identities=32% Similarity=0.409 Sum_probs=53.4
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+|+ +|+++|||+++|||++++++|+++|++|++++|+..... . +.++++|++++++ ++
T Consensus 3 ~l~-gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----------~---------~~~~~~D~~~~~~i~~ 61 (258)
T PRK06398 3 GLK-DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----------D---------VDYFKVDVSNKEQVIK 61 (258)
T ss_pred CCC-CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----------c---------eEEEEccCCCHHHHHH
Confidence 467 899999999999999999999999999999998864321 2 7889999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 62 ~~~~ 65 (258)
T PRK06398 62 GIDY 65 (258)
T ss_pred HHHH
Confidence 7764
No 133
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.42 E-value=1.7e-12 Score=78.38 Aligned_cols=70 Identities=19% Similarity=0.250 Sum_probs=58.0
Q ss_pred EEEEecCCChHHHHHHHHHHh----CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 8 SAFVTGGASGIGRALSLALAG----KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~----~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
+++|||+++|||++++++|++ .|++|++++|+.+.++.+.+++....+. .++.++.+|++++++ ++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~-------~~v~~~~~Dl~~~~~v~~~~ 74 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSG-------LRVVRVSLDLGAEAGLEQLL 74 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCC-------ceEEEEEeccCCHHHHHHHH
Confidence 689999999999999999997 7999999999988888877777542111 228899999999999 8877
Q ss_pred hh
Q 034737 83 LR 84 (85)
Q Consensus 83 ~~ 84 (85)
+.
T Consensus 75 ~~ 76 (256)
T TIGR01500 75 KA 76 (256)
T ss_pred HH
Confidence 54
No 134
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.42 E-value=2e-12 Score=77.87 Aligned_cols=72 Identities=33% Similarity=0.511 Sum_probs=59.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+. +|+++|||++++||..++++|+.+|++ |++++|+.+..+.....+...+.. +.++.+|++++++ .+
T Consensus 4 ~~-~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~ 73 (260)
T PRK06198 4 LD-GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAK---------AVFVQADLSDVEDCRR 73 (260)
T ss_pred CC-CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCe---------EEEEEccCCCHHHHHH
Confidence 44 899999999999999999999999999 999999877666666566433333 7889999999998 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++.
T Consensus 74 ~~~~ 77 (260)
T PRK06198 74 VVAA 77 (260)
T ss_pred HHHH
Confidence 7653
No 135
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.41 E-value=5.4e-13 Score=78.05 Aligned_cols=69 Identities=33% Similarity=0.403 Sum_probs=61.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
.|++++||+++|||++++..|++.|++|++.+++...++.....|...+. -..|.||+++.++ +.++++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~----------h~aF~~DVS~a~~v~~~l~e 83 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGD----------HSAFSCDVSKAHDVQNTLEE 83 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCc----------cceeeeccCcHHHHHHHHHH
Confidence 68999999999999999999999999999999999888888888875432 4679999999999 887765
No 136
>PRK09135 pteridine reductase; Provisional
Probab=99.41 E-value=3.5e-12 Score=76.17 Aligned_cols=73 Identities=22% Similarity=0.239 Sum_probs=56.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+. +++++|||++++||++++++|+++|++|++++|+. +..+.....+...... .+.++.+|+++.++ .+
T Consensus 4 ~~-~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~--------~~~~~~~Dl~~~~~~~~ 74 (249)
T PRK09135 4 DS-AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPG--------SAAALQADLLDPDALPE 74 (249)
T ss_pred CC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCC--------ceEEEEcCCCCHHHHHH
Confidence 44 78999999999999999999999999999999864 3344444444332221 27889999999998 87
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 75 ~~~~ 78 (249)
T PRK09135 75 LVAA 78 (249)
T ss_pred HHHH
Confidence 7653
No 137
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.41 E-value=3.2e-12 Score=76.81 Aligned_cols=70 Identities=24% Similarity=0.317 Sum_probs=55.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.|+++|||++++||.+++++|+++|++|++++|+. +..+...+.+...+.. +.++.+|++++++ .++++
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~ 72 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVE---------VIFFPADVADLSAHEAMLD 72 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCc---------eEEEEecCCCHHHHHHHHH
Confidence 57899999999999999999999999999999864 3344444444332223 8899999999998 88776
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
+
T Consensus 73 ~ 73 (256)
T PRK12745 73 A 73 (256)
T ss_pred H
Confidence 4
No 138
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.41 E-value=2.7e-12 Score=76.79 Aligned_cols=70 Identities=20% Similarity=0.151 Sum_probs=54.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+|+++|||++++||++++++|+++|++|++.. ++....+...+++...+.. +.++.+|++|.++ .++++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~ 73 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFD---------FIASEGNVGDWDSTKAAFD 73 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCc---------EEEEEcCCCCHHHHHHHHH
Confidence 89999999999999999999999999988754 4444444444444433323 7888999999999 88765
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
+
T Consensus 74 ~ 74 (246)
T PRK12938 74 K 74 (246)
T ss_pred H
Confidence 3
No 139
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.41 E-value=2.6e-12 Score=77.60 Aligned_cols=70 Identities=24% Similarity=0.385 Sum_probs=58.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||++++||++++++|+.+|++|++++|++.+.+...+.+...+.. +.++.+|++++++ .+++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~~~~~~ 71 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGE---------ALVVPTDVSDAEACERLIEA 71 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHHHHHHHHH
Confidence 368999999999999999999999999999999987777666666543333 8889999999998 887653
No 140
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.40 E-value=3.5e-12 Score=76.37 Aligned_cols=72 Identities=32% Similarity=0.427 Sum_probs=56.9
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+. +++++|||++++||.+++++|+.+|+.|+++.+ +++..+...+.+...+.. +.++.+|++++++ .+
T Consensus 4 ~~-~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~D~~~~~~~~~ 73 (247)
T PRK12935 4 LN-GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHD---------VYAVQADVSKVEDANR 73 (247)
T ss_pred CC-CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCe---------EEEEECCCCCHHHHHH
Confidence 45 899999999999999999999999999987654 445555555555433333 8899999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 74 ~~~~ 77 (247)
T PRK12935 74 LVEE 77 (247)
T ss_pred HHHH
Confidence 7764
No 141
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.40 E-value=2.7e-12 Score=76.84 Aligned_cols=65 Identities=26% Similarity=0.359 Sum_probs=53.4
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++++|||+++|||++++++|+.+|++|++++|+++..+.+.. .... +.++.+|++++++ ++++++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~---------~~~~~~D~~~~~~~~~~~~~ 67 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSAN---------IFTLAFDVTDHPGTKAALSQ 67 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCC---------CeEEEeeCCCHHHHHHHHHh
Confidence 579999999999999999999999999999998765444322 1222 7889999999999 888764
No 142
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.40 E-value=2.7e-12 Score=77.36 Aligned_cols=69 Identities=35% Similarity=0.473 Sum_probs=53.7
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|++. +|+++|||+++|||++++++|+++|++|+++++..+.. .+.+... . +.++.+|++|+++ +
T Consensus 3 ~~l~-~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~---------~~~~~~Dl~~~~~~~ 67 (255)
T PRK06463 3 MRFK-GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--G---------VFTIKCDVGNRDQVK 67 (255)
T ss_pred CCcC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--C---------CeEEEecCCCHHHHH
Confidence 4456 89999999999999999999999999998887654321 1222211 2 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 68 ~~~~~ 72 (255)
T PRK06463 68 KSKEV 72 (255)
T ss_pred HHHHH
Confidence 88764
No 143
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.40 E-value=2.3e-12 Score=77.67 Aligned_cols=67 Identities=39% Similarity=0.521 Sum_probs=54.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
|. +++++|||+++|||.+++++|+++|++|++++|+....+.....+. ..++++|++++++ +++
T Consensus 5 ~~-~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------------~~~~~~D~~~~~~~~~~ 69 (255)
T PRK06057 5 LA-GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--------------GLFVPTDVTDEDAVNAL 69 (255)
T ss_pred CC-CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC--------------CcEEEeeCCCHHHHHHH
Confidence 55 8999999999999999999999999999999998765544433321 3578999999998 887
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 70 ~~~ 72 (255)
T PRK06057 70 FDT 72 (255)
T ss_pred HHH
Confidence 764
No 144
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.39 E-value=3.3e-12 Score=77.68 Aligned_cols=70 Identities=27% Similarity=0.273 Sum_probs=57.3
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
|+++|||+++|||++++++|+++|++|++++|+++..+...+++...+.. ...++.+|++++++ .+++++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~D~~~~~~~~~~~~~ 71 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGT--------VPEHRALDISDYDAVAAFAAD 71 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC--------cceEEEeeCCCHHHHHHHHHH
Confidence 47999999999999999999999999999999887777776666544332 14568999999999 887764
No 145
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.39 E-value=4e-12 Score=76.07 Aligned_cols=70 Identities=23% Similarity=0.331 Sum_probs=54.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+++++|||++++||.+++++|+++|+.|++.++ +++..+.....+...+.. +.++.+|++|.++ .++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~~~~~ 72 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGE---------ALAVAADVADEADVLRLFE 72 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCc---------EEEEEeccCCHHHHHHHHH
Confidence 679999999999999999999999999888764 444444444444433222 7889999999999 88776
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
+
T Consensus 73 ~ 73 (248)
T PRK06123 73 A 73 (248)
T ss_pred H
Confidence 3
No 146
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.39 E-value=2.8e-12 Score=76.42 Aligned_cols=65 Identities=20% Similarity=0.144 Sum_probs=52.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||+++|||++++++|+++|++|++++|+++... +.+... . +.++.+|++++++ ++++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~--~---------~~~~~~D~~~~~~~~~~~~~ 67 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQA--G---------AQCIQADFSTNAGIMAFIDE 67 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHc--C---------CEEEEcCCCCHHHHHHHHHH
Confidence 689999999999999999999999999999999875432 222211 1 5788999999999 887764
No 147
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.38 E-value=3.5e-12 Score=76.96 Aligned_cols=66 Identities=36% Similarity=0.380 Sum_probs=55.3
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
|+++|||++++||++++++|+++|++|++++|+.+..+.+...+. +.. +.++.+|+++.++ .+++.
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~---------~~~~~~D~~~~~~v~~~~~ 68 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGN---------AWTGALDVTDRAAWDAALA 68 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCc---------eEEEEecCCCHHHHHHHHH
Confidence 589999999999999999999999999999999876666554442 122 8899999999998 87765
No 148
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.38 E-value=4.1e-12 Score=76.37 Aligned_cols=70 Identities=41% Similarity=0.550 Sum_probs=54.8
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +++++|||++++||.+++++|+++|++|++++|+... ......+. .. .+.++.+|++++++ ++
T Consensus 12 ~~~-~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~---------~~~~~~~Dl~~~~~~~~ 78 (255)
T PRK06841 12 DLS-GKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GG---------NAKGLVCDVSDSQSVEA 78 (255)
T ss_pred CCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CC---------ceEEEEecCCCHHHHHH
Confidence 456 8999999999999999999999999999999998653 22222221 11 26789999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 79 ~~~~ 82 (255)
T PRK06841 79 AVAA 82 (255)
T ss_pred HHHH
Confidence 7754
No 149
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.38 E-value=5.7e-12 Score=75.50 Aligned_cols=70 Identities=26% Similarity=0.299 Sum_probs=55.9
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.|+++|||+++|||..++++|+++|++|+++. ++++..+....++.....+ +.++.+|++++++ .++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~~~~~~~ 72 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGR---------ACVVAGDVANEADVIAMFD 72 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCc---------EEEEEeccCCHHHHHHHHH
Confidence 46899999999999999999999999988765 5555566666666443333 8899999999999 88775
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
+
T Consensus 73 ~ 73 (248)
T PRK06947 73 A 73 (248)
T ss_pred H
Confidence 4
No 150
>PRK06182 short chain dehydrogenase; Validated
Probab=99.37 E-value=3.1e-12 Score=77.76 Aligned_cols=64 Identities=30% Similarity=0.275 Sum_probs=53.7
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||+++|||++++++|+++|++|++++|+.++++.... .. +.++.+|++|+++ ++++++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~------~~---------~~~~~~Dv~~~~~~~~~~~~ 67 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS------LG---------VHPLSLDVTDEASIKAAVDT 67 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh------CC---------CeEEEeeCCCHHHHHHHHHH
Confidence 7899999999999999999999999999999998765543321 12 7789999999999 888763
No 151
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.37 E-value=2.5e-12 Score=77.81 Aligned_cols=65 Identities=29% Similarity=0.447 Sum_probs=54.7
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||+++|||++++++|+++|++|++++++...... .. +.++.+|++++++ +
T Consensus 5 ~~l~-~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---------~~---------~~~~~~D~~~~~~~~ 65 (266)
T PRK06171 5 LNLQ-GKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---------EN---------YQFVPTDVSSAEEVN 65 (266)
T ss_pred ccCC-CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---------Cc---------eEEEEccCCCHHHHH
Confidence 4567 8999999999999999999999999999999988754321 12 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 66 ~~~~~ 70 (266)
T PRK06171 66 HTVAE 70 (266)
T ss_pred HHHHH
Confidence 87764
No 152
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.37 E-value=6.9e-12 Score=75.40 Aligned_cols=69 Identities=25% Similarity=0.219 Sum_probs=56.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+++++|||++++||++++++|+.+|++|++++|+++..+.+.+.....+.. +.++.+|++|+++ .+++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~ 71 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLA---------LRVEKLDLTDAIDRAQAAE 71 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCc---------ceEEEeeCCCHHHHHHHhc
Confidence 578999999999999999999999999999999877666555544433333 8899999999998 77643
No 153
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.37 E-value=5.9e-12 Score=76.05 Aligned_cols=72 Identities=22% Similarity=0.239 Sum_probs=53.5
Q ss_pred CCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCc-----------cchHHHHHHHHHHhhhccCCCCCCceEEE
Q 034737 3 LKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSE-----------EKGNEVAALVEKENAKFHSNLGFPSAMFI 69 (85)
Q Consensus 3 l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 69 (85)
|. +|+++|||++ +|||++++++|+++|++|+++++.. .......+++...+. ++.++
T Consensus 4 l~-~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---------~~~~~ 73 (256)
T PRK12859 4 LK-NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGV---------KVSSM 73 (256)
T ss_pred cC-CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCC---------eEEEE
Confidence 56 8999999998 4999999999999999998876431 112223333332222 38899
Q ss_pred EecCCCHHH-HHHhhh
Q 034737 70 RCDVTNTKF-ALAFLR 84 (85)
Q Consensus 70 ~~Dv~~~~~-~~~~~~ 84 (85)
++|+++.++ .+++++
T Consensus 74 ~~D~~~~~~i~~~~~~ 89 (256)
T PRK12859 74 ELDLTQNDAPKELLNK 89 (256)
T ss_pred EcCCCCHHHHHHHHHH
Confidence 999999999 888764
No 154
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.37 E-value=5.4e-12 Score=76.05 Aligned_cols=70 Identities=40% Similarity=0.471 Sum_probs=56.8
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
++ +++++|||++++||++++++|+++|++|++++|+.+..+...+..... . +.++.+|++++++ ..+
T Consensus 9 ~~-~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~---------~~~~~~D~~~~~~~~~~ 76 (264)
T PRK12829 9 LD-GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--K---------VTATVADVADPAQVERV 76 (264)
T ss_pred cC-CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--c---------eEEEEccCCCHHHHHHH
Confidence 45 899999999999999999999999999999999876555544333211 2 7899999999998 877
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 77 ~~~ 79 (264)
T PRK12829 77 FDT 79 (264)
T ss_pred HHH
Confidence 653
No 155
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.37 E-value=8.5e-12 Score=74.76 Aligned_cols=74 Identities=28% Similarity=0.360 Sum_probs=56.1
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF- 78 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 78 (85)
|++. +++++|||++++||++++++|+.+|+++++..++ .+........+...+.. +.++.+|++++++
T Consensus 2 ~~~~-~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~ 71 (252)
T PRK06077 2 YSLK-DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGE---------GIGVLADVSTREGC 71 (252)
T ss_pred CCCC-CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCe---------eEEEEeccCCHHHH
Confidence 4567 8999999999999999999999999998877654 33344444444433323 7789999999998
Q ss_pred HHHhhh
Q 034737 79 ALAFLR 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
.++++.
T Consensus 72 ~~~~~~ 77 (252)
T PRK06077 72 ETLAKA 77 (252)
T ss_pred HHHHHH
Confidence 877653
No 156
>PRK06484 short chain dehydrogenase; Validated
Probab=99.37 E-value=4.2e-12 Score=83.09 Aligned_cols=67 Identities=27% Similarity=0.419 Sum_probs=56.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||+++|||++++++|+++|++|++++|+++.++.+.+++ +.. +..+.+|++|+++ ++++++
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~~~~~ 336 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDE---------HLSVQADITDEAAVESAFAQ 336 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCc---------eeEEEccCCCHHHHHHHHHH
Confidence 899999999999999999999999999999999987666655433 122 6789999999999 888764
No 157
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.37 E-value=7.1e-12 Score=74.75 Aligned_cols=71 Identities=23% Similarity=0.335 Sum_probs=57.0
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+++ +++++|||++++||++++++|+++|+.|++.+++.+..+.....+ +.. +.++.+|+++.++ +
T Consensus 2 ~~~~-~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~ 68 (245)
T PRK12936 2 FDLS-GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GER---------VKIFPANLSDRDEVK 68 (245)
T ss_pred cCCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCc---------eEEEEccCCCHHHHH
Confidence 3466 899999999999999999999999999988888876655544332 122 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 69 ~~~~~ 73 (245)
T PRK12936 69 ALGQK 73 (245)
T ss_pred HHHHH
Confidence 87653
No 158
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.37 E-value=5.8e-12 Score=85.09 Aligned_cols=74 Identities=38% Similarity=0.500 Sum_probs=60.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
|. +|+++|||+++|||++++++|+++|++|++++|+.+..+.....+...... ..+.++.+|++|+++ .++
T Consensus 412 l~-gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~-------~~~~~v~~Dvtd~~~v~~a 483 (676)
T TIGR02632 412 LA-RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGA-------GRAVALKMDVTDEQAVKAA 483 (676)
T ss_pred CC-CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCC-------CcEEEEECCCCCHHHHHHH
Confidence 45 899999999999999999999999999999999987777666666533221 127789999999999 888
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 484 ~~~ 486 (676)
T TIGR02632 484 FAD 486 (676)
T ss_pred HHH
Confidence 764
No 159
>PRK08264 short chain dehydrogenase; Validated
Probab=99.37 E-value=5.3e-12 Score=75.22 Aligned_cols=67 Identities=30% Similarity=0.372 Sum_probs=55.5
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF- 78 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 78 (85)
|++. +++++|||++++||++++++|+++|+ +|++++|+.++.+. .+.. +.++.+|++++++
T Consensus 2 ~~~~-~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~---------~~~~~~D~~~~~~~ 64 (238)
T PRK08264 2 MDIK-GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPR---------VVPLQLDVTDPASV 64 (238)
T ss_pred CCCC-CCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCc---------eEEEEecCCCHHHH
Confidence 4566 89999999999999999999999999 99999998765433 1122 8899999999999
Q ss_pred HHHhhh
Q 034737 79 ALAFLR 84 (85)
Q Consensus 79 ~~~~~~ 84 (85)
.++++.
T Consensus 65 ~~~~~~ 70 (238)
T PRK08264 65 AAAAEA 70 (238)
T ss_pred HHHHHh
Confidence 887653
No 160
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.37 E-value=6.1e-12 Score=76.32 Aligned_cols=71 Identities=17% Similarity=0.244 Sum_probs=51.7
Q ss_pred CCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 3 LKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 3 l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|. +|+++|||+ ++|||++++++|++.|++|+++++.....+. .+++...... ..++.+|++|+++ +
T Consensus 4 l~-~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~Dv~d~~~v~ 72 (260)
T PRK06997 4 LA-GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGS---------DLVFPCDVASDEQID 72 (260)
T ss_pred cC-CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHH-HHHHHHhcCC---------cceeeccCCCHHHHH
Confidence 45 899999996 6799999999999999999988765321222 2222222111 3468999999999 9
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++++.
T Consensus 73 ~~~~~ 77 (260)
T PRK06997 73 ALFAS 77 (260)
T ss_pred HHHHH
Confidence 88764
No 161
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.37 E-value=4.4e-12 Score=77.44 Aligned_cols=64 Identities=25% Similarity=0.189 Sum_probs=53.6
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||+++|||++++++|+++|++|++++|+++.++.+.. .. +.++.+|++|.++ +++++.
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~------~~---------~~~~~~Dl~d~~~~~~~~~~ 68 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA------EG---------LEAFQLDYAEPESIAALVAQ 68 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH------CC---------ceEEEccCCCHHHHHHHHHH
Confidence 6899999999999999999999999999999999766544321 12 6789999999998 887754
No 162
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.36 E-value=4.4e-12 Score=77.23 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=55.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||++++||++++++|+++|++|++++|+.+.++...+.+ +.. +.++++|++++++ .++++.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~~~~~ 70 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDR---------LLPLALDVTDRAAVFAAVET 70 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCC---------eeEEEccCCCHHHHHHHHHH
Confidence 789999999999999999999999999999999877655543322 112 7889999999999 887653
No 163
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.36 E-value=7e-12 Score=75.49 Aligned_cols=68 Identities=29% Similarity=0.404 Sum_probs=56.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||++++||++++++|+++|++|++++|+.+..+...+.+. ... +.++.+|+.++++ .+++++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~---------~~~~~~D~~~~~~~~~~~~~ 70 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DAR---------FVPVACDLTDAASLAAALAN 70 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCc---------eEEEEecCCCHHHHHHHHHH
Confidence 6799999999999999999999999999999998876666555442 112 7899999999998 877653
No 164
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.36 E-value=4.1e-12 Score=77.53 Aligned_cols=67 Identities=28% Similarity=0.215 Sum_probs=54.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||+++|||++++++|+++|++|++++|+++..+.+... .+. ++.++.+|++|+++ .++++.
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~---------~~~~~~~D~~d~~~~~~~~~~ 71 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPD---------RALARLLDVTDFDAIDAVVAD 71 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCC---------CeeEEEccCCCHHHHHHHHHH
Confidence 68999999999999999999999999999999987655443321 111 27889999999999 887653
No 165
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.36 E-value=9.3e-12 Score=74.14 Aligned_cols=69 Identities=26% Similarity=0.228 Sum_probs=53.9
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEec-CccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDL-SEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
|+++|||++++||++++++|+++|++|+++.| +++..+.....+...+.. +.++.+|++++++ .+++++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~~ 71 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFD---------FRVVEGDVSSFESCKAAVAK 71 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCc---------eEEEEecCCCHHHHHHHHHH
Confidence 58999999999999999999999999998888 444444444444322222 8899999999998 887754
No 166
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.36 E-value=7.8e-12 Score=74.67 Aligned_cols=72 Identities=25% Similarity=0.326 Sum_probs=56.5
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC--HHH-H
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN--TKF-A 79 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~-~ 79 (85)
|. +++++|||+++|||++++++|+++|++|++++|+++..+...+++..... +.+.++.+|+++ .++ .
T Consensus 4 l~-~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~--------~~~~~~~~D~~~~~~~~~~ 74 (239)
T PRK08703 4 LS-DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGH--------PEPFAIRFDLMSAEEKEFE 74 (239)
T ss_pred CC-CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCC--------CCcceEEeeecccchHHHH
Confidence 45 89999999999999999999999999999999999877777666654322 126788999976 344 5
Q ss_pred HHhh
Q 034737 80 LAFL 83 (85)
Q Consensus 80 ~~~~ 83 (85)
++++
T Consensus 75 ~~~~ 78 (239)
T PRK08703 75 QFAA 78 (239)
T ss_pred HHHH
Confidence 5443
No 167
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.35 E-value=1.1e-11 Score=74.09 Aligned_cols=72 Identities=32% Similarity=0.465 Sum_probs=55.0
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc----cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE----EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
+. +++++|||++++||+++++.|+.+|++|+++++.. +..+....++...+.. +.++.+|++++++
T Consensus 4 ~~-~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~Dl~~~~~ 73 (249)
T PRK12827 4 LD-SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGK---------ALGLAFDVRDFAA 73 (249)
T ss_pred cC-CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCc---------EEEEEccCCCHHH
Confidence 45 78999999999999999999999999999877643 3333333344332222 8899999999999
Q ss_pred -HHHhhh
Q 034737 79 -ALAFLR 84 (85)
Q Consensus 79 -~~~~~~ 84 (85)
+++++.
T Consensus 74 ~~~~~~~ 80 (249)
T PRK12827 74 TRAALDA 80 (249)
T ss_pred HHHHHHH
Confidence 887653
No 168
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.34 E-value=8.8e-12 Score=74.76 Aligned_cols=65 Identities=31% Similarity=0.397 Sum_probs=53.7
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. +|+++|||++++||..++++|+++|++|++++++. +...... +.++++|++++++ +
T Consensus 4 ~~~~-~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~---------~~~~~~D~~~~~~~~ 64 (252)
T PRK08220 4 MDFS-GKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYP---------FATFVLDVSDAAAVA 64 (252)
T ss_pred cCCC-CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCc---------eEEEEecCCCHHHHH
Confidence 4566 89999999999999999999999999999999876 1111222 7889999999999 8
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
+++++
T Consensus 65 ~~~~~ 69 (252)
T PRK08220 65 QVCQR 69 (252)
T ss_pred HHHHH
Confidence 87754
No 169
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.34 E-value=9.4e-12 Score=74.78 Aligned_cols=66 Identities=18% Similarity=0.262 Sum_probs=54.3
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++++|||++++||.++++.|+.+|++|++++|+++.++.....+ +.. +.++.+|+++.++ .+++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---------~~~~~~Dl~~~~~i~~~~~~ 67 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDN---------LYIAQLDVRNRAAIEEMLAS 67 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccc---------eEEEEecCCCHHHHHHHHHH
Confidence 36899999999999999999999999999999987655544333 122 7889999999999 887653
No 170
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.33 E-value=1.1e-11 Score=73.99 Aligned_cols=69 Identities=33% Similarity=0.499 Sum_probs=55.4
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++++|||++++||.+++++|+++|++|+++ .|+++..+....++...+.. +.++++|++|+++ ++++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~d~~~i~~~~~~ 72 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGK---------AFVLQADISDENQVVAMFTA 72 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCe---------EEEEEccCCCHHHHHHHHHH
Confidence 589999999999999999999999998775 56666666666655543333 7889999999999 888764
No 171
>PLN00015 protochlorophyllide reductase
Probab=99.33 E-value=4.8e-12 Score=78.45 Aligned_cols=66 Identities=23% Similarity=0.187 Sum_probs=54.5
Q ss_pred EEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 10 FVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 10 litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|||+++|||++++++|+++| ++|++++|+.+..+....++..... ++.++.+|++|.++ ++++++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~---------~~~~~~~Dl~d~~~v~~~~~~ 68 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKD---------SYTVMHLDLASLDSVRQFVDN 68 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCC---------eEEEEEecCCCHHHHHHHHHH
Confidence 589999999999999999999 9999999998777666665532222 27889999999999 888764
No 172
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.33 E-value=6.1e-12 Score=75.47 Aligned_cols=66 Identities=23% Similarity=0.334 Sum_probs=51.5
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
|+++|||+++|||++++++|+++|++|++++|++. .++...+ ... .++.++.+|++++++ ++++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~---------~~~~~~~~D~~~~~~~~~~~~~ 69 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYN---------SNLTFHSLDLQDVHELETNFNE 69 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccC---------CceEEEEecCCCHHHHHHHHHH
Confidence 58999999999999999999999999999999863 2222211 111 228899999999999 887754
No 173
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.33 E-value=1.6e-11 Score=73.31 Aligned_cols=67 Identities=31% Similarity=0.393 Sum_probs=54.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +++++|||++++||.++++.|+++|++|++++|+.+..+...+.. . ..++.+|++++++ .+
T Consensus 6 ~~~-~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~---------~~~~~~D~~~~~~v~~ 70 (245)
T PRK07060 6 DFS-GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----G---------CEPLRLDVGDDAAIRA 70 (245)
T ss_pred ccC-CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----C---------CeEEEecCCCHHHHHH
Confidence 455 899999999999999999999999999999999876554433222 1 5678899999988 77
Q ss_pred Hhh
Q 034737 81 AFL 83 (85)
Q Consensus 81 ~~~ 83 (85)
+++
T Consensus 71 ~~~ 73 (245)
T PRK07060 71 ALA 73 (245)
T ss_pred HHH
Confidence 765
No 174
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.33 E-value=9.4e-12 Score=75.73 Aligned_cols=67 Identities=22% Similarity=0.309 Sum_probs=54.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
.|+++|||++++||++++++|+++|++|++++|+++..+.+.... ... +.++.+|++|+++ .+++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~---------~~~~~~D~~~~~~~~~~~~~ 69 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDR---------LWVLQLDVTDSAAVRAVVDR 69 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCc---------eEEEEccCCCHHHHHHHHHH
Confidence 468999999999999999999999999999999876555443322 112 7899999999999 877653
No 175
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.33 E-value=4.9e-12 Score=76.69 Aligned_cols=62 Identities=29% Similarity=0.305 Sum_probs=52.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||++++||++++++|+++|++|++++|+.+..+.. .. +.++++|++|+++ +++++.
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--------~~---------~~~~~~D~~d~~~~~~~~~~ 66 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--------PG---------VELLELDVTDDASVQAAVDE 66 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--------CC---------CeeEEeecCCHHHHHHHHHH
Confidence 68999999999999999999999999999999986543211 12 7889999999999 888764
No 176
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.32 E-value=9.5e-12 Score=75.02 Aligned_cols=64 Identities=31% Similarity=0.339 Sum_probs=52.7
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. +|+++|||+++|||.+++++|+++|++|++++|+.+.. .... +.++.+|++|+++ ++
T Consensus 6 ~~~-~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~---------~~~~~~D~~~~~~~~~ 66 (260)
T PRK06523 6 ELA-GKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEG---------VEFVAADLTTAEGCAA 66 (260)
T ss_pred CCC-CCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCc---------eeEEecCCCCHHHHHH
Confidence 356 89999999999999999999999999999999986421 0112 7889999999998 87
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
++++
T Consensus 67 ~~~~ 70 (260)
T PRK06523 67 VARA 70 (260)
T ss_pred HHHH
Confidence 7653
No 177
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.2e-11 Score=73.64 Aligned_cols=63 Identities=25% Similarity=0.289 Sum_probs=52.6
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
.++|||+++|||+++++.|+++|++|++++|+.++++...+++ . +.++++|++++++ +++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~---------~~~~~~D~~~~~~v~~~~~~ 65 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----D---------VDAIVCDNTDPASLEEARGL 65 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----c---------CcEEecCCCCHHHHHHHHHH
Confidence 4899999999999999999999999999999887665554433 1 5678999999999 887753
No 178
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=2.4e-11 Score=72.83 Aligned_cols=70 Identities=27% Similarity=0.321 Sum_probs=55.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCC--CHHH-HHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVT--NTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~-~~~~ 82 (85)
+|+++|||++++||..++++|++.|++|++++|+.+..+...+++..... .++.++.+|++ ++++ .+++
T Consensus 12 ~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~--------~~~~~~~~d~~~~~~~~~~~~~ 83 (247)
T PRK08945 12 DRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGG--------PQPAIIPLDLLTATPQNYQQLA 83 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCC--------CCceEEEecccCCCHHHHHHHH
Confidence 89999999999999999999999999999999998777776666654321 12667778886 5666 6554
Q ss_pred h
Q 034737 83 L 83 (85)
Q Consensus 83 ~ 83 (85)
+
T Consensus 84 ~ 84 (247)
T PRK08945 84 D 84 (247)
T ss_pred H
Confidence 4
No 179
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.30 E-value=1.9e-11 Score=72.92 Aligned_cols=67 Identities=25% Similarity=0.372 Sum_probs=54.0
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++|||+++|||.+++++|+++|++|+++++. .+..+...+.+...+.. +.++.+|++++++ .+++++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~Dl~~~~~~~~~~~~ 69 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGN---------ARLLQFDVADRVACRTLLEA 69 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCe---------EEEEEccCCCHHHHHHHHHH
Confidence 5899999999999999999999999888865 34455565566544333 8899999999999 887654
No 180
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.30 E-value=5.5e-11 Score=78.87 Aligned_cols=79 Identities=16% Similarity=0.176 Sum_probs=58.8
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.+++++|||++++||++++++|+++|++|++++|+.++++.+...+..............++.++.+|+++.++ .+.+.
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg 158 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG 158 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence 48999999999999999999999999999999999887776665553211000000011238899999999988 77654
No 181
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.29 E-value=5.6e-11 Score=71.29 Aligned_cols=75 Identities=35% Similarity=0.461 Sum_probs=55.6
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc--hHHHHHHHHHHhhhccCCCCCCceEEEEecCCC-HH
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK--GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN-TK 77 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~-~~ 77 (85)
|.+. +++++|||+++|||+++++.|+.+|++|+++.++.+. .+....... .... ..+.+..+|+++ .+
T Consensus 1 ~~~~-~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~Dvs~~~~ 71 (251)
T COG1028 1 MDLS-GKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGG-------GRAAAVAADVSDDEE 71 (251)
T ss_pred CCCC-CCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCC-------CcEEEEEecCCCCHH
Confidence 4567 8999999999999999999999999998888877654 233332222 1100 127888999998 88
Q ss_pred H-HHHhhh
Q 034737 78 F-ALAFLR 84 (85)
Q Consensus 78 ~-~~~~~~ 84 (85)
+ +.+++.
T Consensus 72 ~v~~~~~~ 79 (251)
T COG1028 72 SVEALVAA 79 (251)
T ss_pred HHHHHHHH
Confidence 8 877764
No 182
>PRK07069 short chain dehydrogenase; Validated
Probab=99.29 E-value=3.7e-11 Score=71.97 Aligned_cols=69 Identities=28% Similarity=0.380 Sum_probs=54.0
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++|||++++||++++++|+++|++|++++|+ .+.++...+.+...... ..+.++.+|++++++ .+++++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~ 72 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGE-------GVAFAAVQDVTDEAQWQALLAQ 72 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCC-------ceEEEEEeecCCHHHHHHHHHH
Confidence 7999999999999999999999999999998 55566665555432211 115568999999999 887764
No 183
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.28 E-value=2.5e-11 Score=72.01 Aligned_cols=64 Identities=19% Similarity=0.256 Sum_probs=52.6
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++++|||++++||.+++++|+++|++|++++|++...+.... + .. +.++.+|++|+++ +++++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~----~~---------~~~~~~D~~d~~~~~~~~~~ 66 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L----PG---------VHIEKLDMNDPASLDQLLQR 66 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c----cc---------cceEEcCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999876543321 1 12 6788999999999 888764
No 184
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.28 E-value=4.6e-11 Score=71.11 Aligned_cols=70 Identities=37% Similarity=0.451 Sum_probs=54.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.++++|||++++||.+++++|+.+|++|+++.++.. ..+.....+...+.. +.++.+|++++++ .++++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~v~~~~~ 76 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRR---------AQAVQADVTDKAALEAAVA 76 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCc---------eEEEECCcCCHHHHHHHHH
Confidence 789999999999999999999999999888766554 333444444433333 8899999999999 88765
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
+
T Consensus 77 ~ 77 (249)
T PRK12825 77 A 77 (249)
T ss_pred H
Confidence 3
No 185
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.28 E-value=2.1e-11 Score=75.80 Aligned_cols=49 Identities=29% Similarity=0.378 Sum_probs=42.8
Q ss_pred CCCCCCcEEEEecC--CChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737 1 MELKPGLSAFVTGG--ASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE 51 (85)
Q Consensus 1 ~~l~~~~~~litG~--~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~ 51 (85)
|+|. ||+++|||+ ++|||+++++.|++.|++|++ .|+.+.++.....+.
T Consensus 5 ~~l~-gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~ 55 (303)
T PLN02730 5 IDLR-GKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLR 55 (303)
T ss_pred cCCC-CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhh
Confidence 5677 999999999 799999999999999999988 788777777776664
No 186
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.28 E-value=3.2e-11 Score=73.22 Aligned_cols=64 Identities=27% Similarity=0.325 Sum_probs=49.5
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
++++|||+++|||++++++|+++|++|+++++. .+.++...+++..... .++.++.+|++|.++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~Dv~d~~~ 66 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRP--------NSAVTCQADLSNSAT 66 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccC--------CceEEEEccCCCchh
Confidence 589999999999999999999999999988654 4556655555543211 126779999999875
No 187
>PRK08324 short chain dehydrogenase; Validated
Probab=99.27 E-value=3.6e-11 Score=81.34 Aligned_cols=69 Identities=39% Similarity=0.548 Sum_probs=58.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||++++||++++++|+.+|++|++++|+.+..+.....+... .. +.++.+|++++++ .+++++
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~---------v~~v~~Dvtd~~~v~~~~~~ 491 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DR---------ALGVACDVTDEAAVQAAFEE 491 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-Cc---------EEEEEecCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999987776666555432 22 8899999999998 887653
No 188
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.27 E-value=3.2e-11 Score=75.19 Aligned_cols=70 Identities=19% Similarity=0.153 Sum_probs=56.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH--HHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV--AALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
++.++|||++|.||..++++|+.+||.|..+.|+++..+.. ...+..... ++..+..|+.|+++ ..++
T Consensus 6 ~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~---------~l~l~~aDL~d~~sf~~ai 76 (327)
T KOG1502|consen 6 GKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKE---------RLKLFKADLLDEGSFDKAI 76 (327)
T ss_pred CcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcc---------cceEEeccccccchHHHHH
Confidence 78999999999999999999999999999999998764332 223332222 38999999999999 8887
Q ss_pred hh
Q 034737 83 LR 84 (85)
Q Consensus 83 ~~ 84 (85)
+.
T Consensus 77 ~g 78 (327)
T KOG1502|consen 77 DG 78 (327)
T ss_pred hC
Confidence 64
No 189
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.26 E-value=2.9e-11 Score=73.59 Aligned_cols=63 Identities=30% Similarity=0.265 Sum_probs=51.6
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
|+++|||+++|||++++++|+++|++|++++|+.+..+.... .. +.++.+|+++.++ +++++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~------~~---------~~~~~~Dl~~~~~~~~~~~~ 65 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA------AG---------FTAVQLDVNDGAALARLAEE 65 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH------CC---------CeEEEeeCCCHHHHHHHHHH
Confidence 589999999999999999999999999999998765443211 12 6788999999998 887653
No 190
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.26 E-value=3.9e-11 Score=71.15 Aligned_cols=65 Identities=31% Similarity=0.376 Sum_probs=53.3
Q ss_pred EEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 10 litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|||++++||++++++|+++|++|++++|+.+..+.....+.. +.. +.++.+|++++++ .+++++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~---------~~~~~~Dl~~~~~~~~~~~~ 66 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAP---------VRTAALDITDEAAVDAFFAE 66 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCc---------eEEEEccCCCHHHHHHHHHh
Confidence 5899999999999999999999999999997766655554431 222 7889999999999 888764
No 191
>PRK12742 oxidoreductase; Provisional
Probab=99.26 E-value=6.3e-11 Score=70.49 Aligned_cols=66 Identities=20% Similarity=0.277 Sum_probs=50.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC-ccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS-EEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
|. +|+++|||+++|||++++++|+.+|++|+++++. .+..+.+...+ . +.++.+|++|.++ .+
T Consensus 4 ~~-~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~---------~~~~~~D~~~~~~~~~ 68 (237)
T PRK12742 4 FT-GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----G---------ATAVQTDSADRDAVID 68 (237)
T ss_pred CC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----C---------CeEEecCCCCHHHHHH
Confidence 56 8999999999999999999999999999887664 33333332211 1 5678899999888 77
Q ss_pred Hhh
Q 034737 81 AFL 83 (85)
Q Consensus 81 ~~~ 83 (85)
+++
T Consensus 69 ~~~ 71 (237)
T PRK12742 69 VVR 71 (237)
T ss_pred HHH
Confidence 654
No 192
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.25 E-value=9.1e-11 Score=73.71 Aligned_cols=69 Identities=23% Similarity=0.113 Sum_probs=54.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|.++|||++++||.++++.|+++|++|++++|+..........+. .... +.++.+|+++.++ .++++.
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~---------~~~~~~Dl~~~~~~~~~~~~ 73 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKK---------IEDHFGDIRDAAKLRKAIAE 73 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCC---------ceEEEccCCCHHHHHHHHhh
Confidence 7899999999999999999999999999999988765443333222 1112 7789999999998 887753
No 193
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.25 E-value=6.6e-11 Score=70.59 Aligned_cols=70 Identities=26% Similarity=0.193 Sum_probs=52.6
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.|+++|||++++||++++++|+++|++|++++|+.. ........+... ..++.++.+|++++++ .++++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~D~~~~~~v~~~~~ 72 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFT---------EDQVRLKELDVTDTEECAEALA 72 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc---------CCeEEEEEcCCCCHHHHHHHHH
Confidence 368999999999999999999999999999999864 122221211111 1238899999999998 88765
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
.
T Consensus 73 ~ 73 (245)
T PRK12824 73 E 73 (245)
T ss_pred H
Confidence 4
No 194
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.24 E-value=9.7e-11 Score=72.78 Aligned_cols=71 Identities=17% Similarity=0.152 Sum_probs=54.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+|+++|||++++||++++++|+.+|++|+++.|+....+.....+..... .+++.++.+|++++++ .++++
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~ 76 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGA-------KERLKLFKADLLDEGSFELAID 76 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCC-------CCceEEEeCCCCCchHHHHHHc
Confidence 78999999999999999999999999999888887654433222211110 1238889999999998 87765
No 195
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.24 E-value=6.2e-11 Score=76.20 Aligned_cols=69 Identities=23% Similarity=0.247 Sum_probs=53.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+++ +|+++|||+++|||++++++|+++|++|++++|++++.+.. ....... +..+.+|++|+++ .+
T Consensus 175 sl~-gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~~---------v~~v~~Dvsd~~~v~~ 241 (406)
T PRK07424 175 SLK-GKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGEDLP---------VKTLHWQVGQEAALAE 241 (406)
T ss_pred CCC-CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcCCC---------eEEEEeeCCCHHHHHH
Confidence 456 89999999999999999999999999999999887544321 1111111 6688999999988 76
Q ss_pred Hhh
Q 034737 81 AFL 83 (85)
Q Consensus 81 ~~~ 83 (85)
.+.
T Consensus 242 ~l~ 244 (406)
T PRK07424 242 LLE 244 (406)
T ss_pred HhC
Confidence 654
No 196
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.24 E-value=1.2e-10 Score=72.40 Aligned_cols=75 Identities=17% Similarity=0.106 Sum_probs=56.0
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|... +++++|||++++||.+++++|+++|++|+++.|+....+........... ...+.++.+|++++++ .
T Consensus 1 ~~~~-~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~~~ 72 (322)
T PLN02986 1 MNGG-GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGA-------KERLKLFKADLLEESSFE 72 (322)
T ss_pred CCCC-CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCC-------CCceEEEecCCCCcchHH
Confidence 4445 89999999999999999999999999999888887654443322211110 1238889999999988 8
Q ss_pred HHhh
Q 034737 80 LAFL 83 (85)
Q Consensus 80 ~~~~ 83 (85)
++++
T Consensus 73 ~~~~ 76 (322)
T PLN02986 73 QAIE 76 (322)
T ss_pred HHHh
Confidence 7765
No 197
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.23 E-value=2.6e-10 Score=66.16 Aligned_cols=69 Identities=28% Similarity=0.501 Sum_probs=54.2
Q ss_pred EEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc---cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 8 SAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE---EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
+++|||+.+|||..+++.|+.++. +++++.|+. .......+++...+.. +.++.+|++|+++ .+++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~---------v~~~~~Dv~d~~~v~~~~ 72 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGAR---------VEYVQCDVTDPEAVAAAL 72 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-E---------EEEEE--TTSHHHHHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCc---------eeeeccCccCHHHHHHHH
Confidence 689999999999999999999975 789999883 2455667777766555 9999999999999 9988
Q ss_pred hhC
Q 034737 83 LRL 85 (85)
Q Consensus 83 ~~~ 85 (85)
+.+
T Consensus 73 ~~~ 75 (181)
T PF08659_consen 73 AQL 75 (181)
T ss_dssp HTS
T ss_pred HHH
Confidence 653
No 198
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.22 E-value=1.1e-10 Score=69.36 Aligned_cols=67 Identities=34% Similarity=0.460 Sum_probs=52.6
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++|||++++||.+++++|+++|++|++++|+. +..+.....+...+.. +.++.+|++|+++ +++++.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~---------~~~~~~D~~~~~~~~~~~~~ 69 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVK---------ALGVVCDVSDREDVKAVVEE 69 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCc---------eEEEEecCCCHHHHHHHHHH
Confidence 58999999999999999999999999998875 4444444444433322 7899999999998 887653
No 199
>PLN02583 cinnamoyl-CoA reductase
Probab=99.21 E-value=1.2e-10 Score=71.93 Aligned_cols=69 Identities=14% Similarity=0.008 Sum_probs=51.0
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc--hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK--GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
+++++|||++++||++++++|+++|++|+++.|+... .......+.... .++.++.+|++|.++ .+++
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~---------~~~~~~~~Dl~d~~~~~~~l 76 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEE---------ERLKVFDVDPLDYHSILDAL 76 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCC---------CceEEEEecCCCHHHHHHHH
Confidence 7899999999999999999999999999999886432 111112221111 237889999999988 7665
Q ss_pred h
Q 034737 83 L 83 (85)
Q Consensus 83 ~ 83 (85)
.
T Consensus 77 ~ 77 (297)
T PLN02583 77 K 77 (297)
T ss_pred c
Confidence 4
No 200
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.21 E-value=1.2e-10 Score=72.75 Aligned_cols=69 Identities=22% Similarity=0.246 Sum_probs=53.0
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+ +|+++|||++++||++++++|+.+| +.|++++|+......+...+. . +.+.++.+|++|++. .
T Consensus 2 ~~-~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~---------~~~~~v~~Dl~d~~~l~ 69 (324)
T TIGR03589 2 FN-NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--A---------PCLRFFIGDVRDKERLT 69 (324)
T ss_pred cC-CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--C---------CcEEEEEccCCCHHHHH
Confidence 45 8999999999999999999999986 689888887654333222221 1 128899999999998 8
Q ss_pred HHhh
Q 034737 80 LAFL 83 (85)
Q Consensus 80 ~~~~ 83 (85)
+++.
T Consensus 70 ~~~~ 73 (324)
T TIGR03589 70 RALR 73 (324)
T ss_pred HHHh
Confidence 7765
No 201
>PLN02240 UDP-glucose 4-epimerase
Probab=99.20 E-value=3.4e-10 Score=70.94 Aligned_cols=77 Identities=27% Similarity=0.290 Sum_probs=55.7
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|+|. ++.++|||++++||.+++++|+.+|++|+++++...........+..... .....+.++.+|++++++ .
T Consensus 1 ~~~~-~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~l~ 74 (352)
T PLN02240 1 MSLM-GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAG-----DLGDNLVFHKVDLRDKEALE 74 (352)
T ss_pred CCCC-CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhc-----ccCccceEEecCcCCHHHHH
Confidence 7788 89999999999999999999999999999998754332222222211110 001237889999999998 8
Q ss_pred HHhh
Q 034737 80 LAFL 83 (85)
Q Consensus 80 ~~~~ 83 (85)
++++
T Consensus 75 ~~~~ 78 (352)
T PLN02240 75 KVFA 78 (352)
T ss_pred HHHH
Confidence 7764
No 202
>PLN02650 dihydroflavonol-4-reductase
Probab=99.20 E-value=2.2e-10 Score=72.01 Aligned_cols=75 Identities=20% Similarity=0.157 Sum_probs=55.9
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
|-.+ .+.++|||++++||.+++++|+.+|++|++++|+.+........+...+. ..++.++.+|+++++. .
T Consensus 1 ~~~~-~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~v~~Dl~d~~~~~ 72 (351)
T PLN02650 1 MGSQ-KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGA-------TTRLTLWKADLAVEGSFD 72 (351)
T ss_pred CCCC-CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCC-------CCceEEEEecCCChhhHH
Confidence 3445 78999999999999999999999999999999887655444322211110 1137889999999988 7
Q ss_pred HHhh
Q 034737 80 LAFL 83 (85)
Q Consensus 80 ~~~~ 83 (85)
++++
T Consensus 73 ~~~~ 76 (351)
T PLN02650 73 DAIR 76 (351)
T ss_pred HHHh
Confidence 7664
No 203
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.19 E-value=1e-10 Score=67.71 Aligned_cols=66 Identities=44% Similarity=0.615 Sum_probs=59.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+.++++||+++|+|++.+++|+++|+.+++.|...++.+...+++.. + +.|...|+++.++ +.++.
T Consensus 9 glvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~---~---------~vf~padvtsekdv~aala 75 (260)
T KOG1199|consen 9 GLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGG---K---------VVFTPADVTSEKDVRAALA 75 (260)
T ss_pred CeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCC---c---------eEEeccccCcHHHHHHHHH
Confidence 78999999999999999999999999999999999888888887742 2 8999999999998 77764
No 204
>PRK08017 oxidoreductase; Provisional
Probab=99.19 E-value=1.5e-10 Score=69.58 Aligned_cols=64 Identities=22% Similarity=0.166 Sum_probs=51.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
.++++|||++++||.+++++|+++|++|++++|+.++.+.... .. +.++.+|+++.++ .++++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~------~~---------~~~~~~D~~~~~~~~~~~~~ 66 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS------LG---------FTGILLDLDDPESVERAADE 66 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh------CC---------CeEEEeecCCHHHHHHHHHH
Confidence 3689999999999999999999999999999998765443321 12 6788999999988 776653
No 205
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.18 E-value=1.9e-10 Score=68.88 Aligned_cols=63 Identities=24% Similarity=0.276 Sum_probs=49.5
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
++++|||+++|||++++++|+++|++|++++|+.... . ..... .++.++.+|+++.++ ++++.
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~---------~~~~~~~~D~~~~~~~~~~~~ 65 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAG---------ERLAEVELDLSDAAAAAAWLA 65 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccC---------CeEEEEEeccCCHHHHHHHHH
Confidence 3699999999999999999999999999999886431 1 11111 238899999999999 87554
No 206
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.18 E-value=1.9e-10 Score=68.09 Aligned_cols=62 Identities=19% Similarity=0.175 Sum_probs=50.6
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
++++|||++++||++++++|+++|++|++++|+.+..+.+.. .. +.++.+|+++.++ +++++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~------~~---------~~~~~~D~~~~~~v~~~~~ 64 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA------LG---------AEALALDVADPASVAGLAW 64 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh------cc---------ceEEEecCCCHHHHHHHHH
Confidence 579999999999999999999999999999998765443321 12 5688999999998 87654
No 207
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.17 E-value=2.5e-10 Score=71.80 Aligned_cols=68 Identities=19% Similarity=0.103 Sum_probs=53.6
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+++++|||++++||.+++++|+.+|++|++++|+..........+.. .. .+.++.+|+++++. .+++.
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~---------~~~~~~~Dl~~~~~~~~~~~ 78 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GD---------RLRLFRADLQEEGSFDEAVK 78 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CC---------eEEEEECCCCCHHHHHHHHc
Confidence 67899999999999999999999999999998886554443333221 12 28889999999988 77764
No 208
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.17 E-value=1.6e-10 Score=69.81 Aligned_cols=65 Identities=20% Similarity=0.285 Sum_probs=48.9
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
++ +++++|||+++|||++++++|+++|++|++++|+...... .. .... ..++.+|+++.++ .+.
T Consensus 12 l~-~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~--~~~~---------~~~~~~D~~~~~~~~~~ 76 (245)
T PRK12367 12 WQ-GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN--DESP---------NEWIKWECGKEESLDKQ 76 (245)
T ss_pred hC-CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh--ccCC---------CeEEEeeCCCHHHHHHh
Confidence 45 8999999999999999999999999999999988621111 00 0011 3567899999988 665
Q ss_pred h
Q 034737 82 F 82 (85)
Q Consensus 82 ~ 82 (85)
+
T Consensus 77 ~ 77 (245)
T PRK12367 77 L 77 (245)
T ss_pred c
Confidence 4
No 209
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.17 E-value=2.1e-10 Score=71.00 Aligned_cols=68 Identities=26% Similarity=0.277 Sum_probs=58.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|.++||||.+|+|+.+|++|.++|+.|+..+..++..+.+..+.. .++ +..+++|++++++ +++.+.
T Consensus 29 ~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~r---------l~t~~LDVT~~esi~~a~~~ 97 (322)
T KOG1610|consen 29 DKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPR---------LRTLQLDVTKPESVKEAAQW 97 (322)
T ss_pred CcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCc---------ceeEeeccCCHHHHHHHHHH
Confidence 7899999999999999999999999999999977777777766553 233 8889999999999 887653
No 210
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.16 E-value=3e-10 Score=70.38 Aligned_cols=71 Identities=14% Similarity=0.103 Sum_probs=52.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
++.++|||++++||.+++++|+.+|++|++++|+............... ..+++.++.+|+++++. .++++
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~~~Dl~~~~~~~~~~~ 75 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDG-------AKERLHLFKANLLEEGSFDSVVD 75 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccC-------CCCceEEEeccccCcchHHHHHc
Confidence 6899999999999999999999999999999888654332221111110 01238899999999988 77765
No 211
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.15 E-value=3.2e-10 Score=66.98 Aligned_cols=65 Identities=28% Similarity=0.299 Sum_probs=52.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
.|+++|||++++||+++++.|+++ ++|++++|+.+..+...+.. .. +.++++|++|+++ .+++..
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~---------~~~~~~D~~~~~~~~~~~~~ 68 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PG---------ATPFPVDLTDPEAIAAAVEQ 68 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----cc---------ceEEecCCCCHHHHHHHHHh
Confidence 568999999999999999999999 99999999876544433221 22 7889999999999 887753
No 212
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.15 E-value=4.1e-10 Score=74.25 Aligned_cols=74 Identities=20% Similarity=0.202 Sum_probs=64.6
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+. ||+++||||+|+||..+++++++.++ +++++++++.+......+++...+... +.++-+|+.|.+. ..
T Consensus 248 ~~-gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~-------~~~~igdVrD~~~~~~ 319 (588)
T COG1086 248 LT-GKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELK-------LRFYIGDVRDRDRVER 319 (588)
T ss_pred cC-CCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcc-------eEEEecccccHHHHHH
Confidence 45 99999999999999999999999887 588889999999999999988755433 8999999999999 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++.
T Consensus 320 ~~~~ 323 (588)
T COG1086 320 AMEG 323 (588)
T ss_pred HHhc
Confidence 8764
No 213
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.15 E-value=2.3e-10 Score=71.57 Aligned_cols=76 Identities=14% Similarity=-0.023 Sum_probs=53.5
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH-HHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN-EVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
+. ++.++|||++++||.+++++|+.+|++|++++|...... .....+..... .....+.++.+|++|.++ .+
T Consensus 4 ~~-~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 4 PP-RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPH-----PNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CC-CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccc-----cccCceEEEEecCCCHHHHHH
Confidence 45 789999999999999999999999999999988654211 11111110000 011238899999999998 88
Q ss_pred Hhhh
Q 034737 81 AFLR 84 (85)
Q Consensus 81 ~~~~ 84 (85)
+++.
T Consensus 78 ~~~~ 81 (340)
T PLN02653 78 WLDD 81 (340)
T ss_pred HHHH
Confidence 7753
No 214
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.14 E-value=3.5e-10 Score=68.73 Aligned_cols=74 Identities=22% Similarity=0.196 Sum_probs=61.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-----EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-----FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-----~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
.|+++|||+++|||.+++++|+...- .+++.+|+-++++.....+.+.++.. --++..+..|+++..+ .
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~-----~i~~~yvlvD~sNm~Sv~ 77 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKS-----TIEVTYVLVDVSNMQSVF 77 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCc-----eeEEEEEEEehhhHHHHH
Confidence 68999999999999999999998653 36777999999999999998877731 1238889999999998 7
Q ss_pred HHhhh
Q 034737 80 LAFLR 84 (85)
Q Consensus 80 ~~~~~ 84 (85)
++..+
T Consensus 78 ~A~~d 82 (341)
T KOG1478|consen 78 RASKD 82 (341)
T ss_pred HHHHH
Confidence 76543
No 215
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.13 E-value=3.8e-10 Score=70.73 Aligned_cols=73 Identities=15% Similarity=0.040 Sum_probs=51.7
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch--HHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG--NEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
|+++|||++++||.+++++|+..|++|++++|+.+.. +.. ..+...... .....+.++.+|++|.++ .++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~Dl~d~~~l~~~~~ 75 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRI-EHIYEDPHN----VNKARMKLHYGDLTDSSNLRRIID 75 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhh-hhhhhcccc----ccccceeEEEeccCCHHHHHHHHH
Confidence 5799999999999999999999999999999876421 111 111110000 001238899999999998 88776
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
.
T Consensus 76 ~ 76 (343)
T TIGR01472 76 E 76 (343)
T ss_pred h
Confidence 3
No 216
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.13 E-value=6.5e-10 Score=64.49 Aligned_cols=67 Identities=28% Similarity=0.314 Sum_probs=52.2
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++++|||++ |++..+++.|+.+|++|++++|+++..+.+...+.. .. ++.++.+|++|+++ .++++.
T Consensus 1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~---------~i~~~~~Dv~d~~sv~~~i~~ 68 (177)
T PRK08309 1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PE---------SITPLPLDYHDDDALKLAIKS 68 (177)
T ss_pred CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CC---------cEEEEEccCCCHHHHHHHHHH
Confidence 368999998 777789999999999999999987665555443321 11 28889999999999 888764
No 217
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.12 E-value=3.9e-10 Score=72.99 Aligned_cols=65 Identities=32% Similarity=0.360 Sum_probs=50.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
+++++|||+++|||..++++|+++|++|+++++... .+....+++ . ..++.+|++++++ ++++
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~---------~~~~~~Dv~~~~~~~~~~ 275 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----G---------GTALALDITAPDAPARIA 275 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----C---------CeEEEEeCCCHHHHHHHH
Confidence 789999999999999999999999999999988532 222222111 1 4578999999998 8877
Q ss_pred hh
Q 034737 83 LR 84 (85)
Q Consensus 83 ~~ 84 (85)
+.
T Consensus 276 ~~ 277 (450)
T PRK08261 276 EH 277 (450)
T ss_pred HH
Confidence 53
No 218
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.12 E-value=4.6e-10 Score=69.59 Aligned_cols=72 Identities=26% Similarity=0.251 Sum_probs=63.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
.+.++|||+++|||++++..+..+|++|.++.|+.+++.++...+.-.....+ +.+..+|+.|+++ ..++++
T Consensus 33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~-------v~~~S~d~~~Y~~v~~~~~~ 105 (331)
T KOG1210|consen 33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVED-------VSYKSVDVIDYDSVSKVIEE 105 (331)
T ss_pred cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccce-------eeEeccccccHHHHHHHHhh
Confidence 46899999999999999999999999999999999999999998876655433 7799999999999 888765
No 219
>PLN02686 cinnamoyl-CoA reductase
Probab=99.12 E-value=8.9e-10 Score=69.96 Aligned_cols=75 Identities=20% Similarity=0.129 Sum_probs=53.6
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|.++|||++++||.+++++|+.+|++|+++.++.+..+.+. .+...+.. ......+.++.+|++|+++ .++++.
T Consensus 53 ~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~~~~---~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 53 ARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMFGEM---GRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhhccc---cccCCceEEEEcCCCCHHHHHHHHHh
Confidence 789999999999999999999999999998888765443332 22111100 0001127889999999998 877653
No 220
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.12 E-value=5.3e-10 Score=66.43 Aligned_cols=59 Identities=31% Similarity=0.398 Sum_probs=49.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||++++||++++++|+++|++|++++|+.+.. .. ..++.+|++++++ ++++++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~---------~~~~~~D~~~~~~~~~~~~~ 62 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-----------FP---------GELFACDLADIEQTAATLAQ 62 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-----------cC---------ceEEEeeCCCHHHHHHHHHH
Confidence 78999999999999999999999999999999986530 01 2467899999988 877653
No 221
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.11 E-value=7e-10 Score=70.83 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=51.4
Q ss_pred CcEEEEecCCChHHHH--HHHHHHhCCCEEEEEecCccch------------HHHHHHHHHHhhhccCCCCCCceEEEEe
Q 034737 6 GLSAFVTGGASGIGRA--LSLALAGKGVFVTVVDLSEEKG------------NEVAALVEKENAKFHSNLGFPSAMFIRC 71 (85)
Q Consensus 6 ~~~~litG~~~gig~~--~~~~l~~~g~~v~~~~~~~~~~------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 71 (85)
+|++||||+++|||.+ +++.| ..|++++++++..+.. +...+.+...+.. +..+.+
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~---------a~~i~~ 110 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLY---------AKSING 110 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCc---------eEEEEc
Confidence 6899999999999999 89999 9999988887533211 1233333322222 678999
Q ss_pred cCCCHHH-HHHhhh
Q 034737 72 DVTNTKF-ALAFLR 84 (85)
Q Consensus 72 Dv~~~~~-~~~~~~ 84 (85)
|++++++ ++++++
T Consensus 111 DVss~E~v~~lie~ 124 (398)
T PRK13656 111 DAFSDEIKQKVIEL 124 (398)
T ss_pred CCCCHHHHHHHHHH
Confidence 9999999 988875
No 222
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.10 E-value=1.2e-09 Score=68.38 Aligned_cols=72 Identities=18% Similarity=0.164 Sum_probs=52.9
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. +++++|||++++||.+++++|+.+|++|+++.|+......... +..... .+.+.++.+|++|++. .++
T Consensus 7 ~~-~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~-------~~~~~~~~~Dl~d~~~~~~~ 77 (338)
T PLN00198 7 TG-KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQE-------LGDLKIFGADLTDEESFEAP 77 (338)
T ss_pred CC-CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCC-------CCceEEEEcCCCChHHHHHH
Confidence 45 7899999999999999999999999999888887654332221 110000 0127889999999988 776
Q ss_pred hh
Q 034737 82 FL 83 (85)
Q Consensus 82 ~~ 83 (85)
+.
T Consensus 78 ~~ 79 (338)
T PLN00198 78 IA 79 (338)
T ss_pred Hh
Confidence 64
No 223
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.10 E-value=8.3e-10 Score=62.40 Aligned_cols=69 Identities=26% Similarity=0.368 Sum_probs=51.1
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH---HHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV---AALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
++++|||++++||.+++++|+.+|+ .|+++.|+++..+.. ...+...+. ++.++.+|++++++ +++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~---------~~~~~~~D~~~~~~~~~~ 71 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGA---------EVTVVACDVADRAALAAA 71 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCC---------eEEEEECCCCCHHHHHHH
Confidence 4789999999999999999999997 677888876543322 233332222 27889999999988 877
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+.+
T Consensus 72 ~~~ 74 (180)
T smart00822 72 LAA 74 (180)
T ss_pred HHH
Confidence 653
No 224
>PLN02214 cinnamoyl-CoA reductase
Probab=99.09 E-value=1.3e-09 Score=68.60 Aligned_cols=69 Identities=16% Similarity=0.125 Sum_probs=52.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH-HHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV-AALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+++++|||++++||.+++++|+++|++|++++|+.+..... ...+... ..++.++.+|++++++ .++++
T Consensus 10 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~ 80 (342)
T PLN02214 10 GKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG---------KERLILCKADLQDYEALKAAID 80 (342)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC---------CCcEEEEecCcCChHHHHHHHh
Confidence 78999999999999999999999999999999986542221 1111110 1127889999999988 77764
No 225
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.09 E-value=1.7e-09 Score=70.30 Aligned_cols=73 Identities=22% Similarity=0.222 Sum_probs=49.9
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc-------hHH------HHHHHHHHhhhccCCCCCCceEEEEec
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK-------GNE------VAALVEKENAKFHSNLGFPSAMFIRCD 72 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~-------~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~D 72 (85)
++.++|||++|+||++++++|+.+|++|+++++.... .+. ....+...... ...++.++.+|
T Consensus 47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~~v~~D 121 (442)
T PLN02572 47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-----SGKEIELYVGD 121 (442)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-----hCCcceEEECC
Confidence 7899999999999999999999999999998753211 000 01111100000 01128899999
Q ss_pred CCCHHH-HHHhh
Q 034737 73 VTNTKF-ALAFL 83 (85)
Q Consensus 73 v~~~~~-~~~~~ 83 (85)
++|++. .++++
T Consensus 122 l~d~~~v~~~l~ 133 (442)
T PLN02572 122 ICDFEFLSEAFK 133 (442)
T ss_pred CCCHHHHHHHHH
Confidence 999998 88775
No 226
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.07 E-value=2.1e-09 Score=67.69 Aligned_cols=76 Identities=20% Similarity=0.043 Sum_probs=53.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+. ++.++|||++|.||.+++++|+++|++|++++|.................. ....++.++.+|+.|.+. .++
T Consensus 13 ~~-~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Di~d~~~l~~~ 87 (348)
T PRK15181 13 LA-PKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE----EQWSRFIFIQGDIRKFTDCQKA 87 (348)
T ss_pred cc-CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhcccc----ccCCceEEEEccCCCHHHHHHH
Confidence 45 689999999999999999999999999999998654322222222111000 011237899999999887 776
Q ss_pred hh
Q 034737 82 FL 83 (85)
Q Consensus 82 ~~ 83 (85)
++
T Consensus 88 ~~ 89 (348)
T PRK15181 88 CK 89 (348)
T ss_pred hh
Confidence 54
No 227
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.07 E-value=8.9e-10 Score=66.02 Aligned_cols=62 Identities=35% Similarity=0.501 Sum_probs=52.6
Q ss_pred cCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 13 GGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 13 G~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
|++ +|||++++++|+++|++|++++|+.++.+...+++....+. .++.+|++++++ ++++++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~----------~~~~~D~~~~~~v~~~~~~ 65 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA----------EVIQCDLSDEESVEALFDE 65 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS----------EEEESCTTSHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC----------ceEeecCcchHHHHHHHHH
Confidence 455 99999999999999999999999998877777777665543 359999999999 998765
No 228
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.06 E-value=5.8e-10 Score=66.35 Aligned_cols=40 Identities=35% Similarity=0.444 Sum_probs=36.9
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE 41 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 41 (85)
|+|+ +|+++|||++++||++++++|+++|++|++++|+..
T Consensus 1 ~~l~-~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~ 40 (235)
T PRK06550 1 QEFM-TKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK 40 (235)
T ss_pred CCCC-CCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 6788 999999999999999999999999999999988753
No 229
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.06 E-value=7.4e-10 Score=64.19 Aligned_cols=67 Identities=25% Similarity=0.288 Sum_probs=58.2
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
|. |+.+++||+..|||+.+++.|+..|+.|+.+.|++..+..+.++.... ++.+..|+++.+. .+.
T Consensus 5 la-G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~------------I~Pi~~Dls~wea~~~~ 71 (245)
T KOG1207|consen 5 LA-GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSL------------IIPIVGDLSAWEALFKL 71 (245)
T ss_pred cc-ceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcc------------eeeeEecccHHHHHHHh
Confidence 56 999999999999999999999999999999999999888887766422 7889999999887 554
Q ss_pred h
Q 034737 82 F 82 (85)
Q Consensus 82 ~ 82 (85)
+
T Consensus 72 l 72 (245)
T KOG1207|consen 72 L 72 (245)
T ss_pred h
Confidence 3
No 230
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.06 E-value=1.8e-09 Score=67.29 Aligned_cols=73 Identities=29% Similarity=0.286 Sum_probs=55.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+++++|||+++.||.+++.+|+++|+.|+++|+-........+..+.... .+..+.|++.|+.|.+. +++|++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~------~~~~v~f~~~Dl~D~~~L~kvF~~ 75 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLG------EGKSVFFVEGDLNDAEALEKLFSE 75 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcC------CCCceEEEEeccCCHHHHHHHHhh
Confidence 57899999999999999999999999999999755433222222222111 02239999999999999 999875
No 231
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.05 E-value=1.2e-09 Score=65.17 Aligned_cols=71 Identities=25% Similarity=0.260 Sum_probs=51.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhC-CCEEEEE-ecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVV-DLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
.+.++|||+.+|||..++++|++. |..+++. .|+++++ .+++.... ...+++..+++|+++.++ .+++
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~------~~d~rvHii~Ldvt~deS~~~~~ 73 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKS------KSDSRVHIIQLDVTCDESIDNFV 73 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhh------ccCCceEEEEEecccHHHHHHHH
Confidence 457999999999999999999974 5555444 5667765 23333221 112349999999999999 9988
Q ss_pred hhC
Q 034737 83 LRL 85 (85)
Q Consensus 83 ~~~ 85 (85)
+++
T Consensus 74 ~~V 76 (249)
T KOG1611|consen 74 QEV 76 (249)
T ss_pred HHH
Confidence 764
No 232
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.02 E-value=2.4e-09 Score=68.55 Aligned_cols=69 Identities=20% Similarity=0.186 Sum_probs=53.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH--HHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE--VAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
++.++|||++++||+++++.|+++|++|++++|+...... ....+...... +.++.+|++|+++ .+++
T Consensus 60 ~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~---------v~~v~~Dl~d~~~l~~~~ 130 (390)
T PLN02657 60 DVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPG---------AEVVFGDVTDADSLRKVL 130 (390)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCC---------ceEEEeeCCCHHHHHHHH
Confidence 6789999999999999999999999999999998754321 11111111222 7899999999999 8876
Q ss_pred h
Q 034737 83 L 83 (85)
Q Consensus 83 ~ 83 (85)
+
T Consensus 131 ~ 131 (390)
T PLN02657 131 F 131 (390)
T ss_pred H
Confidence 5
No 233
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.02 E-value=5.1e-09 Score=60.28 Aligned_cols=58 Identities=26% Similarity=0.287 Sum_probs=51.2
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
++|+|+++.+|+.++++|+++|++|+++.|++++.+. ... +.++.+|+.|+++ .+++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~---------~~~~~~d~~d~~~~~~al~ 59 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPG---------VEIIQGDLFDPDSVKAALK 59 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTT---------EEEEESCTTCHHHHHHHHT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccc---------cccceeeehhhhhhhhhhh
Confidence 6899999999999999999999999999999986665 233 8999999999998 77764
No 234
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.99 E-value=3e-09 Score=79.68 Aligned_cols=35 Identities=29% Similarity=0.317 Sum_probs=32.7
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecC
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLS 39 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~ 39 (85)
++++++|||+++|||..++++|+++ |++|++++|+
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 4789999999999999999999988 6999999998
No 235
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.98 E-value=7.4e-09 Score=62.05 Aligned_cols=73 Identities=23% Similarity=0.323 Sum_probs=59.5
Q ss_pred CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-
Q 034737 2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF- 78 (85)
Q Consensus 2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~- 78 (85)
.|. ||+++|+|-+ ++|+..+++.|.++|+.+...+.++ ++++-.+++.+.-.. ..+++||+++.++
T Consensus 3 ~L~-GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s---------~~v~~cDV~~d~~i 71 (259)
T COG0623 3 LLE-GKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS---------DLVLPCDVTNDESI 71 (259)
T ss_pred ccC-CceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC---------CeEEecCCCCHHHH
Confidence 356 9999999955 5899999999999999999998887 566666666554433 5789999999999
Q ss_pred HHHhhhC
Q 034737 79 ALAFLRL 85 (85)
Q Consensus 79 ~~~~~~~ 85 (85)
+++|.++
T Consensus 72 ~~~f~~i 78 (259)
T COG0623 72 DALFATI 78 (259)
T ss_pred HHHHHHH
Confidence 9998753
No 236
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.96 E-value=4.4e-09 Score=65.49 Aligned_cols=61 Identities=18% Similarity=0.200 Sum_probs=49.3
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.++|||++|.||++++++|+++|++|++++|+.+.... +.. .. +.++.+|+.|+++ .++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~--~~---------v~~v~~Dl~d~~~l~~al~ 63 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE--WG---------AELVYGDLSLPETLPPSFK 63 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh--cC---------CEEEECCCCCHHHHHHHHC
Confidence 58999999999999999999999999999998643221 111 12 7899999999998 77765
No 237
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.96 E-value=4.4e-09 Score=62.73 Aligned_cols=65 Identities=22% Similarity=0.179 Sum_probs=51.6
Q ss_pred CcEEEEecCC-ChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGA-SGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~-~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.|.++||||+ +|||.++++.|.+.|+.|+.+.|.-+....+.-+. . +...++|++++++ ..+..
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----g---------l~~~kLDV~~~~~V~~v~~ 72 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----G---------LKPYKLDVSKPEEVVTVSG 72 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----C---------CeeEEeccCChHHHHHHHH
Confidence 5789999977 58999999999999999999999876544433221 1 7889999999998 77654
Q ss_pred h
Q 034737 84 R 84 (85)
Q Consensus 84 ~ 84 (85)
+
T Consensus 73 e 73 (289)
T KOG1209|consen 73 E 73 (289)
T ss_pred H
Confidence 4
No 238
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.95 E-value=5.8e-09 Score=62.10 Aligned_cols=60 Identities=18% Similarity=0.243 Sum_probs=45.1
Q ss_pred cEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
|+++|||+++|||++++++|++++ ..++..+++.... . .. +++.++++|++++++ +++.+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~---------~~~~~~~~Dls~~~~~~~~~~ 63 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QH---------DNVQWHALDVTDEAEIKQLSE 63 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--cc---------CceEEEEecCCCHHHHHHHHH
Confidence 469999999999999999999985 5666666654321 0 11 228899999999998 77654
No 239
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.93 E-value=1.4e-08 Score=63.35 Aligned_cols=68 Identities=22% Similarity=0.323 Sum_probs=49.2
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.++|||++++||.+++++|+++|++|+++++...........+..... .++.++.+|++|+++ .+++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~Dl~d~~~~~~~~~ 70 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGG--------KHPTFVEGDIRNEALLTEILH 70 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcC--------CCceEEEccCCCHHHHHHHHh
Confidence 589999999999999999999999999987654332222222221111 126788999999998 77664
No 240
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.93 E-value=4.3e-09 Score=65.12 Aligned_cols=72 Identities=21% Similarity=0.143 Sum_probs=53.3
Q ss_pred EEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
++||||+|.||..++++|++.++ +++++++++.++..+..++....+... -...+..+.+|+.|.+. .++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~---v~~~~~~vigDvrd~~~l~~~~~ 74 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPK---VRFEIVPVIGDVRDKERLNRIFE 74 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TT---CEEEEE--CTSCCHHHHHHHHTT
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccC---cccccCceeecccCHHHHHHHHh
Confidence 68999999999999999999986 699999999999999888865543211 00013456889999999 88876
No 241
>PLN02427 UDP-apiose/xylose synthase
Probab=98.89 E-value=8.7e-09 Score=65.62 Aligned_cols=70 Identities=16% Similarity=0.092 Sum_probs=50.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.++++|||++|.||.+++++|+.+ |++|++++|+......... .... .....+.++.+|+.|.+. .++++
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~----~~~~----~~~~~~~~~~~Dl~d~~~l~~~~~ 85 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE----PDTV----PWSGRIQFHRINIKHDSRLEGLIK 85 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhc----cccc----cCCCCeEEEEcCCCChHHHHHHhh
Confidence 457999999999999999999998 5899999887644322211 1000 000138899999999988 77664
No 242
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.87 E-value=2.4e-08 Score=61.89 Aligned_cols=69 Identities=20% Similarity=0.348 Sum_probs=51.5
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCc---cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSE---EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
+. +|+++|+|+ +|+|++++..|+..|++ |++++|+. ++++.+.+++...+.. +.+..+|+++.++
T Consensus 124 ~~-~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~---------~~~~~~d~~~~~~ 192 (289)
T PRK12548 124 VK-GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPE---------CIVNVYDLNDTEK 192 (289)
T ss_pred cC-CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCC---------ceeEEechhhhhH
Confidence 44 789999999 69999999999999986 99999987 5566666666443332 4566778877665
Q ss_pred -HHHh
Q 034737 79 -ALAF 82 (85)
Q Consensus 79 -~~~~ 82 (85)
.+.+
T Consensus 193 ~~~~~ 197 (289)
T PRK12548 193 LKAEI 197 (289)
T ss_pred HHhhh
Confidence 5544
No 243
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.86 E-value=4.3e-09 Score=65.43 Aligned_cols=37 Identities=32% Similarity=0.460 Sum_probs=33.4
Q ss_pred CCCCCcEEEEecCC--ChHHHHHHHHHHhCCCEEEEEecC
Q 034737 2 ELKPGLSAFVTGGA--SGIGRALSLALAGKGVFVTVVDLS 39 (85)
Q Consensus 2 ~l~~~~~~litG~~--~gig~~~~~~l~~~g~~v~~~~~~ 39 (85)
++. +|+++|||++ +|||+++++.|+++|++|++.++.
T Consensus 5 ~~~-gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLT-GKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCC-CCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 356 9999999996 999999999999999999998754
No 244
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.85 E-value=2e-08 Score=62.25 Aligned_cols=64 Identities=23% Similarity=0.253 Sum_probs=51.4
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+.+|||||++-||.+++..|++.|++|+++|+............. ..|+++|+.|.+. .++|++
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~--------------~~f~~gDi~D~~~L~~vf~~ 65 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ--------------FKFYEGDLLDRALLTAVFEE 65 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc--------------CceEEeccccHHHHHHHHHh
Confidence 368999999999999999999999999999987644333322111 4799999999999 888864
No 245
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.85 E-value=8.6e-09 Score=63.81 Aligned_cols=62 Identities=18% Similarity=0.206 Sum_probs=49.5
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
++++|||++++||.++++.|+++|++|++++|+++...... ... +.++.+|++++++ .++++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~---------~~~~~~D~~~~~~l~~~~~ 63 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE------GLD---------VEIVEGDLRDPASLRKAVA 63 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc------cCC---------ceEEEeeCCCHHHHHHHHh
Confidence 36899999999999999999999999999999865432111 011 7889999999988 77664
No 246
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.84 E-value=2.3e-08 Score=60.39 Aligned_cols=60 Identities=22% Similarity=0.288 Sum_probs=46.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH-HH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT-KF 78 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~ 78 (85)
++.++|||++++||+.++++|+.+|++|+++.|+++...... . .... +.++.+|+++. ..
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~-~~~~---------~~~~~~Dl~d~~~~ 77 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---P-QDPS---------LQIVRADVTEGSDK 77 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---c-cCCc---------eEEEEeeCCCCHHH
Confidence 678999999999999999999999999999999876433221 1 1112 78899999983 44
No 247
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.84 E-value=7.7e-08 Score=56.33 Aligned_cols=70 Identities=24% Similarity=0.319 Sum_probs=54.0
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
++. ++.++|.|+++++|+.+++.|+..|++|+++.|+.++.+...+.+..... .....+|+.+.++ .+
T Consensus 25 ~l~-~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~----------~~~~~~~~~~~~~~~~ 93 (194)
T cd01078 25 DLK-GKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG----------EGVGAVETSDDAARAA 93 (194)
T ss_pred CCC-CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC----------CcEEEeeCCCHHHHHH
Confidence 456 88999999999999999999999999999999998877777666643221 3445567777666 55
Q ss_pred Hh
Q 034737 81 AF 82 (85)
Q Consensus 81 ~~ 82 (85)
.+
T Consensus 94 ~~ 95 (194)
T cd01078 94 AI 95 (194)
T ss_pred HH
Confidence 54
No 248
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.79 E-value=2.9e-08 Score=62.42 Aligned_cols=68 Identities=22% Similarity=0.192 Sum_probs=46.1
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEE-EEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVT-VVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+.++|||++++||.++++.|+++|+.++ ++++.... .... .+..... ..++.++.+|++|+++ +++++
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~~-~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~ 71 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNLM-SLAPVAQ-------SERFAFEKVDICDRAELARVFT 71 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cchh-hhhhccc-------CCceEEEECCCcChHHHHHHHh
Confidence 4799999999999999999999998754 45554321 1111 1111000 1127788999999998 88775
No 249
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.78 E-value=3.9e-08 Score=57.36 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=29.6
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 40 (85)
+++|||+++|||++++++|+++ ++|++++|+.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~ 33 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS 33 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC
Confidence 6899999999999999999999 9999998864
No 250
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.77 E-value=1.3e-07 Score=56.02 Aligned_cols=61 Identities=25% Similarity=0.233 Sum_probs=49.2
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
++|||+++.||.+++++|+++|+.|+.+.+............ . +.++.+|+.+.+. .++++
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~---------~~~~~~dl~~~~~~~~~~~ 62 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----N---------VEFVIGDLTDKEQLEKLLE 62 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----T---------EEEEESETTSHHHHHHHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----e---------EEEEEeecccccccccccc
Confidence 689999999999999999999999888887765443322222 2 8999999999988 88765
No 251
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.76 E-value=5.1e-08 Score=59.99 Aligned_cols=66 Identities=26% Similarity=0.341 Sum_probs=46.8
Q ss_pred EEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccc--hHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 8 SAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEK--GNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
.++|||++++||.+++++|+..| .+|+++++.... .+... .+. .. +.+.++.+|++++++ .+++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~-~~---------~~~~~~~~Dl~~~~~~~~~~ 69 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-DLE-DN---------PRYRFVKGDIGDRELVSRLF 69 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-hhc-cC---------CCcEEEEcCCcCHHHHHHHH
Confidence 37999999999999999999987 688888764321 11111 111 01 127889999999999 8876
Q ss_pred hh
Q 034737 83 LR 84 (85)
Q Consensus 83 ~~ 84 (85)
+.
T Consensus 70 ~~ 71 (317)
T TIGR01181 70 TE 71 (317)
T ss_pred hh
Confidence 53
No 252
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.74 E-value=6.9e-08 Score=59.60 Aligned_cols=65 Identities=26% Similarity=0.299 Sum_probs=47.5
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
++|||++++||..++++|+++|++|+++++...........+... .. +.++.+|++++++ .+++.
T Consensus 2 vlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~D~~~~~~~~~~~~ 67 (328)
T TIGR01179 2 ILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TR---------VTFVEGDLRDRELLDRLFE 67 (328)
T ss_pred EEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cc---------eEEEECCCCCHHHHHHHHH
Confidence 789999999999999999999999988876443222211111111 12 7788999999998 87764
No 253
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.71 E-value=3.9e-08 Score=60.63 Aligned_cols=63 Identities=24% Similarity=0.271 Sum_probs=46.5
Q ss_pred EEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 10 FVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 10 litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
||||++|.||.+++++|+++| +.|.++++.+..... ..+. .... ..++.+|++|+++ .++++.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~-~~~~---------~~~~~~Di~d~~~l~~a~~g 66 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQ-KSGV---------KEYIQGDITDPESLEEALEG 66 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhh-cccc---------eeEEEeccccHHHHHHHhcC
Confidence 699999999999999999999 688888877643221 1111 1111 3499999999999 887753
No 254
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.68 E-value=9.8e-08 Score=60.80 Aligned_cols=62 Identities=15% Similarity=0.149 Sum_probs=45.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
++.++|||+++.||.++++.|..+|++|++++|....... ..... ..++.+|+.+.+. ..++
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~------~~~~~---------~~~~~~Dl~d~~~~~~~~ 83 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS------EDMFC---------HEFHLVDLRVMENCLKVT 83 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc------ccccc---------ceEEECCCCCHHHHHHHH
Confidence 7899999999999999999999999999999986431100 00001 4567788887776 5544
No 255
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.66 E-value=1.9e-07 Score=58.71 Aligned_cols=65 Identities=25% Similarity=0.194 Sum_probs=45.3
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCE-EEEEecCcc--chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEE--KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.++|||++++||.+++++|+.+|+. |+++++... ..+... .+ .. ...+.++.+|++|.++ .++++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~---~~-------~~~~~~~~~Dl~d~~~~~~~~~ 70 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DV---SD-------SERYVFEHADICDRAELDRIFA 70 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hc---cc-------CCceEEEEecCCCHHHHHHHHH
Confidence 5899999999999999999999976 555555321 111111 11 11 1127889999999999 88775
No 256
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.62 E-value=1.4e-07 Score=58.01 Aligned_cols=59 Identities=25% Similarity=0.247 Sum_probs=44.9
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
.++|||++|.||.+++++|..+|++|+.++|......... .. +.++.+|+++.+. .+.+
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~---------~~~~~~d~~~~~~~~~~~ 61 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SG---------VEFVVLDLTDRDLVDELA 61 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cc---------cceeeecccchHHHHHHH
Confidence 4899999999999999999999999999999765433322 11 5677777777655 4443
No 257
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.61 E-value=1.9e-07 Score=58.78 Aligned_cols=62 Identities=19% Similarity=0.282 Sum_probs=44.7
Q ss_pred cEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCC-CHHH-HHHh
Q 034737 7 LSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVT-NTKF-ALAF 82 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~-~~~~ 82 (85)
+.++|||++|.||.+++++|+.. |++|++++|+...... +. .. +.+.++.+|+. +.+. .+++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~-~~---------~~~~~~~~Dl~~~~~~~~~~~ 66 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LV-NH---------PRMHFFEGDITINKEWIEYHV 66 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hc-cC---------CCeEEEeCCCCCCHHHHHHHH
Confidence 36999999999999999999986 6999999886532211 11 01 12788899997 5555 5544
No 258
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.60 E-value=6.1e-07 Score=53.59 Aligned_cols=63 Identities=21% Similarity=0.240 Sum_probs=48.3
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++|+|++|.+|+++++.|+..++.|.++.|+... .....+...+ +.++.+|+.|+++ .++++-
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g-----------~~vv~~d~~~~~~l~~al~g 64 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALG-----------AEVVEADYDDPESLVAALKG 64 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTT-----------TEEEES-TT-HHHHHHHHTT
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhccc-----------ceEeecccCCHHHHHHHHcC
Confidence 6899999999999999999999999999999832 2233343322 6778999999999 887753
No 259
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.58 E-value=1.3e-07 Score=57.91 Aligned_cols=56 Identities=16% Similarity=0.207 Sum_probs=45.9
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
++|||++|.+|.+++++|++.|++|.++.|+++.... .. +..+.+|+.|+++ .+++
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~~---------~~~~~~d~~d~~~l~~a~ 58 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------PN---------EKHVKFDWLDEDTWDNPF 58 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------CC---------CccccccCCCHHHHHHHH
Confidence 7899999999999999999999999999999764310 11 5567788888888 7765
No 260
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.56 E-value=2.5e-07 Score=62.79 Aligned_cols=58 Identities=17% Similarity=0.218 Sum_probs=44.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK 77 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 77 (85)
++.++|||++|.||.+++++|+.. |++|++++|+....... + .. +.+.++.+|++|..
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~--~~---------~~~~~~~gDl~d~~ 373 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L--GH---------PRFHFVEGDISIHS 373 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c--CC---------CceEEEeccccCcH
Confidence 678999999999999999999985 79999999876432211 0 01 12788889998754
No 261
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.55 E-value=5e-07 Score=56.51 Aligned_cols=68 Identities=12% Similarity=0.134 Sum_probs=44.8
Q ss_pred EEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccch---HHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737 8 SAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKG---NEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT 76 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~ 76 (85)
+++|||++++||.+++++|+++| ++|+++.|+.+.. +++.+.+...... ......+++.++.+|++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~v~~~~~D~~~~ 73 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLW-QEDLARERIEVVAGDLSEP 73 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCC-CchhhhCCEEEEeCCcCcc
Confidence 47999999999999999999998 6799999876532 2222222211110 0000003489999999864
No 262
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.54 E-value=5.7e-07 Score=54.42 Aligned_cols=60 Identities=20% Similarity=0.187 Sum_probs=51.4
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.++|||+++.+|.+++++|+.+|+.|.+..|+++...... .. +.+...|+.++.+ ...+.
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~---------v~~~~~d~~~~~~l~~a~~ 62 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GG---------VEVVLGDLRDPKSLVAGAK 62 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CC---------cEEEEeccCCHhHHHHHhc
Confidence 5899999999999999999999999999999987766654 22 7889999999988 66543
No 263
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.47 E-value=1.1e-06 Score=59.72 Aligned_cols=68 Identities=15% Similarity=0.211 Sum_probs=47.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhC--CCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGK--GVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~--g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
.+.++|||++|.||.+++++|+.+ +++|+++++.... .... .+... ...+.+.++.+|++|.+. ..++
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~~~-~l~~~-------~~~~~v~~~~~Dl~d~~~~~~~~ 76 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SNLK-NLNPS-------KSSPNFKFVKGDIASADLVNYLL 76 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-chhh-hhhhc-------ccCCCeEEEECCCCChHHHHHHH
Confidence 689999999999999999999987 6789888875311 1111 11100 011238899999999887 6654
No 264
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.47 E-value=9e-07 Score=57.78 Aligned_cols=35 Identities=43% Similarity=0.443 Sum_probs=32.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 40 (85)
++.++|||++|.||.+++++|+++|++|+++++..
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~ 153 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFF 153 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCC
Confidence 68899999999999999999999999999988753
No 265
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.43 E-value=7.7e-07 Score=55.17 Aligned_cols=74 Identities=20% Similarity=0.128 Sum_probs=55.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+|+++|||-++.-|..+++.|+.+|+.|..+.|..+......-.|.+.+ -.+.+++.++.+|++|..+ .++++.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~-----~~~~~~l~l~~gDLtD~~~l~r~l~~ 76 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDP-----HLNDPRLHLHYGDLTDSSNLLRILEE 76 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceecccc-----ccCCceeEEEeccccchHHHHHHHHh
Confidence 6899999999999999999999999999999886543222210222111 1234458999999999998 887765
No 266
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.42 E-value=1.1e-06 Score=54.64 Aligned_cols=67 Identities=25% Similarity=0.306 Sum_probs=48.3
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCE--EEEEecCc--cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVF--VTVVDLSE--EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~--v~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
+.+|||||+++||..+++.++.+... |+.+|.-. ...+.+.. +. +.++..|+++|+.|.+. .++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~-~~----------~~~~~~fv~~DI~D~~~v~~~ 69 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLAD-VE----------DSPRYRFVQGDICDRELVDRL 69 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHh-hh----------cCCCceEEeccccCHHHHHHH
Confidence 36899999999999999999998754 56666532 22333321 11 22349999999999999 888
Q ss_pred hhh
Q 034737 82 FLR 84 (85)
Q Consensus 82 ~~~ 84 (85)
+++
T Consensus 70 ~~~ 72 (340)
T COG1088 70 FKE 72 (340)
T ss_pred HHh
Confidence 864
No 267
>PRK05865 hypothetical protein; Provisional
Probab=98.41 E-value=1.8e-06 Score=60.23 Aligned_cols=58 Identities=24% Similarity=0.287 Sum_probs=47.5
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
.++|||++++||.+++++|+.+|++|++++|+.... + ... +.++.+|+.|.++ .++++
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~---------v~~v~gDL~D~~~l~~al~ 60 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSS---------ADFIAADIRDATAVESAMT 60 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccC---------ceEEEeeCCCHHHHHHHHh
Confidence 589999999999999999999999999999875321 1 012 7789999999988 87765
No 268
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.39 E-value=2.1e-06 Score=56.00 Aligned_cols=35 Identities=40% Similarity=0.408 Sum_probs=32.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 40 (85)
.+.++|||++|.||.+++++|+.+|++|++++|..
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~ 154 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF 154 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46899999999999999999999999999998864
No 269
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.38 E-value=6.1e-06 Score=55.84 Aligned_cols=71 Identities=11% Similarity=0.135 Sum_probs=46.9
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC---EEEEEecCccc---hHHHHHHH---------HHHhhhccCCCCCCceEEEE
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV---FVTVVDLSEEK---GNEVAALV---------EKENAKFHSNLGFPSAMFIR 70 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~~~~---~~~~~~~l---------~~~~~~~~~~~~~~~~~~~~ 70 (85)
+++++|||++|.||..++++|++.+. +|+++.|.... .+++..++ ++..+.........++.++.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~ 198 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV 198 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence 89999999999999999999998764 57888876432 22222222 11111100011235699999
Q ss_pred ecCCCH
Q 034737 71 CDVTNT 76 (85)
Q Consensus 71 ~Dv~~~ 76 (85)
+|++++
T Consensus 199 GDl~d~ 204 (605)
T PLN02503 199 GNVCES 204 (605)
T ss_pred eeCCCc
Confidence 999987
No 270
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.34 E-value=1.9e-06 Score=54.98 Aligned_cols=69 Identities=29% Similarity=0.320 Sum_probs=50.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
+.+++||||+|.+|++++.+|++++ ..|.++|..+.....-.+....... .+.++.+|+.+..+ .+.+
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~---------~v~~~~~D~~~~~~i~~a~ 74 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSG---------RVTVILGDLLDANSISNAF 74 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCC---------ceeEEecchhhhhhhhhhc
Confidence 6789999999999999999999998 6788888776421111111111222 28889999999888 7665
Q ss_pred h
Q 034737 83 L 83 (85)
Q Consensus 83 ~ 83 (85)
.
T Consensus 75 ~ 75 (361)
T KOG1430|consen 75 Q 75 (361)
T ss_pred c
Confidence 4
No 271
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.34 E-value=3e-06 Score=54.54 Aligned_cols=65 Identities=25% Similarity=0.359 Sum_probs=54.5
Q ss_pred cEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 7 LSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
+.++|.|+ |++|+.++..|++++ .+|.+.+|+.++..+....... ++.+.++|+.|.+. .++++.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~------------~v~~~~vD~~d~~al~~li~~ 68 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG------------KVEALQVDAADVDALVALIKD 68 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc------------cceeEEecccChHHHHHHHhc
Confidence 35888888 999999999999999 8999999999887777654432 28999999999998 887753
No 272
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.29 E-value=5.3e-06 Score=53.99 Aligned_cols=48 Identities=33% Similarity=0.374 Sum_probs=38.6
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHH
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALV 50 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l 50 (85)
|+|. +|.++|+|+++ +|.++++.|+..|++|.+++++. +..+...+++
T Consensus 1 ~~~~-~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l 49 (450)
T PRK14106 1 MELK-GKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEEL 49 (450)
T ss_pred CCcC-CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH
Confidence 6777 89999999877 99999999999999999999875 3343333444
No 273
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.29 E-value=2.2e-06 Score=53.13 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=28.2
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLS 39 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 39 (85)
.++|||++|.||.+++++|+.+| +|++++|.
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~ 32 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVH 32 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccc
Confidence 59999999999999999999999 78888775
No 274
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.26 E-value=8.8e-06 Score=54.99 Aligned_cols=60 Identities=27% Similarity=0.257 Sum_probs=42.7
Q ss_pred EEEEecCCChHHHHHHHHHH--hCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737 8 SAFVTGGASGIGRALSLALA--GKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT 76 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~--~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~ 76 (85)
+++|||++|.||.+++++|+ ..|++|++++|+... ........... ..++.++.+|++++
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~--------~~~v~~~~~Dl~~~ 63 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWG--------ADRVVPLVGDLTEP 63 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcC--------CCcEEEEecccCCc
Confidence 69999999999999999999 589999999996532 22211111111 01278899999884
No 275
>PRK12320 hypothetical protein; Provisional
Probab=98.25 E-value=5.8e-06 Score=56.72 Aligned_cols=51 Identities=16% Similarity=0.309 Sum_probs=40.8
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT 76 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~ 76 (85)
.++|||++|.||.+++++|+.+|+.|+++++.+... .... +.++.+|+.++
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~---------ve~v~~Dl~d~ 52 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPR---------VDYVCASLRNP 52 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCC---------ceEEEccCCCH
Confidence 589999999999999999999999999999864310 0112 67788888876
No 276
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.23 E-value=6e-06 Score=53.43 Aligned_cols=37 Identities=35% Similarity=0.442 Sum_probs=32.8
Q ss_pred CCCCcEEEEecC----------------CChHHHHHHHHHHhCCCEEEEEecCc
Q 034737 3 LKPGLSAFVTGG----------------ASGIGRALSLALAGKGVFVTVVDLSE 40 (85)
Q Consensus 3 l~~~~~~litG~----------------~~gig~~~~~~l~~~g~~v~~~~~~~ 40 (85)
|. +|+++|||| ++.+|.++++.|..+|++|++++++.
T Consensus 186 l~-gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~ 238 (399)
T PRK05579 186 LA-GKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPV 238 (399)
T ss_pred cC-CCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCc
Confidence 56 899999999 44599999999999999999998765
No 277
>PLN02778 3,5-epimerase/4-reductase
Probab=98.23 E-value=1.1e-05 Score=50.20 Aligned_cols=47 Identities=17% Similarity=0.126 Sum_probs=36.0
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK 52 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~ 52 (85)
.+.++|||++|.||.+++++|..+|++|+....+....+.+...+..
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~ 55 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDA 55 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHh
Confidence 46799999999999999999999999987655444444444444543
No 278
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.22 E-value=4.9e-06 Score=51.71 Aligned_cols=36 Identities=33% Similarity=0.322 Sum_probs=33.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE 41 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 41 (85)
++.++|||++++||.+++++|+.+|..|+++|.-..
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ft 62 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFT 62 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccc
Confidence 689999999999999999999999999999987543
No 279
>PLN00016 RNA-binding protein; Provisional
Probab=98.22 E-value=4.3e-06 Score=53.37 Aligned_cols=37 Identities=27% Similarity=0.291 Sum_probs=33.9
Q ss_pred CcEEEEe----cCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737 6 GLSAFVT----GGASGIGRALSLALAGKGVFVTVVDLSEEK 42 (85)
Q Consensus 6 ~~~~lit----G~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 42 (85)
.+.++|| |+++.||.+++++|+++|++|++++|+...
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 4679999 999999999999999999999999998754
No 280
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.21 E-value=2.3e-06 Score=52.92 Aligned_cols=31 Identities=39% Similarity=0.424 Sum_probs=26.5
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS 39 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 39 (85)
++|||++|.||.+++++|++.|++++++.++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~ 32 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN 32 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecC
Confidence 7999999999999999999999965555443
No 281
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=98.14 E-value=1.9e-05 Score=48.55 Aligned_cols=77 Identities=18% Similarity=0.014 Sum_probs=56.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
.|+++|||-++.-|..+++.|+.+|+.|..+-|..+......=+.....+.+ -.+.......+|++|..+ .+++..
T Consensus 28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~---h~~~~mkLHYgDmTDss~L~k~I~~ 104 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHT---HNGASMKLHYGDMTDSSCLIKLIST 104 (376)
T ss_pred ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchh---cccceeEEeeccccchHHHHHHHhc
Confidence 5799999999999999999999999999888776655444332222222221 233558899999999998 888764
Q ss_pred C
Q 034737 85 L 85 (85)
Q Consensus 85 ~ 85 (85)
|
T Consensus 105 i 105 (376)
T KOG1372|consen 105 I 105 (376)
T ss_pred c
Confidence 3
No 282
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.14 E-value=1.5e-05 Score=44.34 Aligned_cols=47 Identities=34% Similarity=0.530 Sum_probs=42.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccchHHHHHHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGNEVAALV 50 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~~~~~l 50 (85)
++. ++.++|.|+ ||.|++++..|...|++ |.++.|+.++++.+.+.+
T Consensus 9 ~l~-~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 9 DLK-GKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp TGT-TSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred CcC-CCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 356 899999987 99999999999999987 999999999888888877
No 283
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.13 E-value=4.1e-06 Score=51.12 Aligned_cols=34 Identities=38% Similarity=0.500 Sum_probs=31.4
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK 42 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 42 (85)
++|||++|.||.++++.|+++|++|++++|+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 34 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA 34 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence 5899999999999999999999999999997754
No 284
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.13 E-value=1.2e-05 Score=49.17 Aligned_cols=31 Identities=29% Similarity=0.464 Sum_probs=29.4
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLS 39 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 39 (85)
++|||+++.||.+++++|+++|++|+++.|.
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 7999999999999999999999999999885
No 285
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.13 E-value=4.3e-06 Score=50.65 Aligned_cols=67 Identities=9% Similarity=0.041 Sum_probs=38.7
Q ss_pred EecCCChHHHHHHHHHHhCCC--EEEEEecCccc---hHHHHHHHHHHhhhccC-CCCCCceEEEEecCCCHH
Q 034737 11 VTGGASGIGRALSLALAGKGV--FVTVVDLSEEK---GNEVAALVEKENAKFHS-NLGFPSAMFIRCDVTNTK 77 (85)
Q Consensus 11 itG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~---~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~Dv~~~~ 77 (85)
+||++|.+|.++.++|+..+. +|+++.|..+. .+++.+.+...+..... .....++.++.+|++++.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~ 73 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPN 73 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGG
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccc
Confidence 799999999999999999876 89999997643 22232222211100000 001244999999999864
No 286
>PLN02996 fatty acyl-CoA reductase
Probab=98.12 E-value=3.9e-05 Score=50.87 Aligned_cols=36 Identities=8% Similarity=0.066 Sum_probs=30.7
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC---EEEEEecCcc
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV---FVTVVDLSEE 41 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~~~ 41 (85)
+|+++|||++|.||.++++.|++.+. +|+++.|...
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~ 49 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASD 49 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCC
Confidence 89999999999999999999998653 5778877653
No 287
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.11 E-value=2.4e-05 Score=50.15 Aligned_cols=64 Identities=27% Similarity=0.329 Sum_probs=48.5
Q ss_pred EEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 9 AFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++|.|+ |.+|+.+++.|++... +|++.+|+.++++.....+ .... +.++++|+.|.++ .++++.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~---------~~~~~~d~~~~~~l~~~~~~ 67 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDR---------VEAVQVDVNDPESLAELLRG 67 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTT---------EEEEE--TTTHHHHHHHHTT
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccc---------eeEEEEecCCHHHHHHHHhc
Confidence 578899 9999999999999875 7999999998888876655 2222 8999999999999 888764
No 288
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.10 E-value=1.2e-05 Score=52.36 Aligned_cols=50 Identities=28% Similarity=0.141 Sum_probs=40.0
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK 52 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~ 52 (85)
|++. +|+++|+|+++ +|.++++.|++.|++|++.+++........+.+..
T Consensus 1 ~~~~-~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~ 50 (447)
T PRK02472 1 TEYQ-NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE 50 (447)
T ss_pred CCcC-CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh
Confidence 7788 99999999975 99999999999999999999876444444444443
No 289
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.07 E-value=1.6e-05 Score=50.47 Aligned_cols=48 Identities=27% Similarity=0.340 Sum_probs=39.7
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhC-C-CEEEEEecCccchHHHHHHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGK-G-VFVTVVDLSEEKGNEVAALV 50 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~-g-~~v~~~~~~~~~~~~~~~~l 50 (85)
++. +++++|||++|.||..++++|+.+ | .+++++.|+.+++..+..++
T Consensus 152 ~l~-~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el 201 (340)
T PRK14982 152 DLS-KATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL 201 (340)
T ss_pred CcC-CCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence 356 899999999999999999999864 5 48889999877777766555
No 290
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.96 E-value=3.5e-05 Score=51.56 Aligned_cols=46 Identities=33% Similarity=0.466 Sum_probs=39.5
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV 50 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l 50 (85)
+. +|+++|+|+ +|+|++++..|...|++|++++|+.++.+.+.+.+
T Consensus 377 ~~-~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 377 LA-GKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CC-CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 45 789999999 69999999999999999999999887777766544
No 291
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=97.95 E-value=0.00013 Score=49.80 Aligned_cols=75 Identities=15% Similarity=0.061 Sum_probs=55.2
Q ss_pred CcEEEEecCC-ChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 6 GLSAFVTGGA-SGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 6 ~~~~litG~~-~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
.++++|||++ ++|+-+++.+|+..|+.||+...+-+ +.....+.|-.++. +.+..+.++..+++++.+ ++++
T Consensus 396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a-----~~ga~LwvVpaN~~SysDVdAlI 470 (866)
T COG4982 396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHA-----RYGAALWVVPANMGSYSDVDALI 470 (866)
T ss_pred cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhC-----CCCceEEEEeccccchhhHHHHH
Confidence 6899999977 47999999999999999998876543 22233333333332 245568999999999999 8887
Q ss_pred hhC
Q 034737 83 LRL 85 (85)
Q Consensus 83 ~~~ 85 (85)
+.|
T Consensus 471 ewI 473 (866)
T COG4982 471 EWI 473 (866)
T ss_pred HHh
Confidence 643
No 292
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.94 E-value=5.2e-05 Score=46.86 Aligned_cols=47 Identities=34% Similarity=0.521 Sum_probs=40.6
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVE 51 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~ 51 (85)
+. ++.++|.|+ +|+|++++..|...| .+|+++.|+.++.+.+.+.+.
T Consensus 121 ~~-~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~ 168 (278)
T PRK00258 121 LK-GKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG 168 (278)
T ss_pred CC-CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 45 789999987 899999999999999 689999999888877776654
No 293
>PRK09620 hypothetical protein; Provisional
Probab=97.90 E-value=4.4e-05 Score=46.14 Aligned_cols=35 Identities=31% Similarity=0.511 Sum_probs=31.3
Q ss_pred CCCCcEEEEecCC----------------ChHHHHHHHHHHhCCCEEEEEec
Q 034737 3 LKPGLSAFVTGGA----------------SGIGRALSLALAGKGVFVTVVDL 38 (85)
Q Consensus 3 l~~~~~~litG~~----------------~gig~~~~~~l~~~g~~v~~~~~ 38 (85)
|. ||.++||+|+ |.+|.++++.|+.+|+.|+++++
T Consensus 1 l~-gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g 51 (229)
T PRK09620 1 MK-GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG 51 (229)
T ss_pred CC-CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 35 8999999886 88999999999999999998875
No 294
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=97.89 E-value=6.8e-05 Score=46.34 Aligned_cols=32 Identities=44% Similarity=0.518 Sum_probs=28.2
Q ss_pred EEEecCCChHHHHHHHHHHhCCC-EEEEEecCc
Q 034737 9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLSE 40 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~ 40 (85)
++|||+++.||.++++.|..+|+ .|+++++..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~ 33 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR 33 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC
Confidence 58999999999999999999998 688877654
No 295
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=97.88 E-value=2.6e-05 Score=48.21 Aligned_cols=37 Identities=35% Similarity=0.495 Sum_probs=33.0
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++|||+++.||++++.+|...|+.|+++.|++.+...
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~ 37 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQ 37 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhh
Confidence 5899999999999999999999999999998765433
No 296
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.85 E-value=8.4e-05 Score=44.01 Aligned_cols=46 Identities=30% Similarity=0.385 Sum_probs=38.5
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL 49 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 49 (85)
++. +|+++|.|.+ .+|..+++.|.+.|++|++.+++++..+...+.
T Consensus 25 ~l~-gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 25 SLE-GKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCC-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 356 8999999984 899999999999999999999987766655543
No 297
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=97.85 E-value=5.7e-05 Score=47.28 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=53.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
|-++-+-|+++++|+.++.+|++.|..|++-+|..+....-.+-+. +-.++.++..|+.|++| +++++
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmG----------dLGQvl~~~fd~~DedSIr~vvk 129 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMG----------DLGQVLFMKFDLRDEDSIRAVVK 129 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecc----------cccceeeeccCCCCHHHHHHHHH
Confidence 6788999999999999999999999999999997654322222221 11238999999999999 98875
No 298
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.78 E-value=0.00014 Score=44.71 Aligned_cols=45 Identities=22% Similarity=0.353 Sum_probs=39.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE 51 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~ 51 (85)
++.++++|+ +|+|++++..|...|++|.+++|+.++.+.+.+.+.
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~ 161 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQ 161 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence 688999998 699999999999999999999999887777766654
No 299
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.76 E-value=0.00017 Score=46.31 Aligned_cols=68 Identities=13% Similarity=0.159 Sum_probs=45.8
Q ss_pred cEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCcc---chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEE---KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT 76 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~ 76 (85)
+++++||++|.+|..+...|+.+- .+|++..|-++ ...++.+.+... ...+ .....+++.+.+|++.+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~-~~~~-e~~~~ri~vv~gDl~e~ 72 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLY-RHWD-ELSADRVEVVAGDLAEP 72 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhh-hhhh-hhhcceEEEEecccccc
Confidence 478999999999999999998765 48999887553 344444444411 1110 12334599999999844
No 300
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=97.73 E-value=5.8e-05 Score=46.46 Aligned_cols=29 Identities=28% Similarity=0.343 Sum_probs=25.5
Q ss_pred EEecCCChHHHHHHHHHHhCCCEEEEEec
Q 034737 10 FVTGGASGIGRALSLALAGKGVFVTVVDL 38 (85)
Q Consensus 10 litG~~~gig~~~~~~l~~~g~~v~~~~~ 38 (85)
+|||++|.||.++++.|+..|+.|+++.+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~ 29 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT 29 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeec
Confidence 58999999999999999999998776643
No 301
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.73 E-value=0.00034 Score=37.52 Aligned_cols=57 Identities=26% Similarity=0.307 Sum_probs=42.5
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+.+.. +.++.+|.++++. +++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~---------------~~~i~gd~~~~~~l~~a 58 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG---------------VEVIYGDATDPEVLERA 58 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT---------------SEEEES-TTSHHHHHHT
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc---------------cccccccchhhhHHhhc
Confidence 467766 57999999999997779999999987655544321 6788899998887 553
No 302
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.70 E-value=0.0001 Score=47.67 Aligned_cols=36 Identities=36% Similarity=0.514 Sum_probs=31.6
Q ss_pred CCCCcEEEEecC---------------CCh-HHHHHHHHHHhCCCEEEEEecC
Q 034737 3 LKPGLSAFVTGG---------------ASG-IGRALSLALAGKGVFVTVVDLS 39 (85)
Q Consensus 3 l~~~~~~litG~---------------~~g-ig~~~~~~l~~~g~~v~~~~~~ 39 (85)
+. ||.++|||+ ++| +|.++++.|..+|++|+++++.
T Consensus 183 ~~-~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~ 234 (390)
T TIGR00521 183 LE-GKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGP 234 (390)
T ss_pred cC-CceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence 56 899999999 556 9999999999999999988754
No 303
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.70 E-value=0.00043 Score=42.93 Aligned_cols=62 Identities=26% Similarity=0.315 Sum_probs=40.0
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc---cchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE---EKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK 77 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 77 (85)
+.++|+|++|.||.++.+.|..+|+.++..+|.. ...+.+.+.+....+. +++.-+-+++++
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~~~pd---------~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEAFKPD---------VVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHHH--S---------EEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHHhCCC---------eEeccceeecHH
Confidence 3699999999999999999999999999887654 2344555555544444 555544444443
No 304
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.69 E-value=0.00036 Score=42.03 Aligned_cols=59 Identities=24% Similarity=0.372 Sum_probs=45.9
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH-HHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA-LVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
.++|.|+ +-+|..+++.|.+.|++|++++++++..++... ++. ...+.+|-++++- +++
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~--------------~~~v~gd~t~~~~L~~a 62 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELD--------------THVVIGDATDEDVLEEA 62 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcc--------------eEEEEecCCCHHHHHhc
Confidence 4677766 778999999999999999999999987666332 222 6778888888876 554
No 305
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.68 E-value=0.00078 Score=42.94 Aligned_cols=63 Identities=22% Similarity=0.304 Sum_probs=46.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc---------------------cchHHHHHHHHHHhhhccCC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE---------------------EKGNEVAALVEKENAKFHSN 60 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~---------------------~~~~~~~~~l~~~~~~~~~~ 60 (85)
|. ++.++|.|+ +|+|..+++.|+..|. ++.++|++. .+.+.+.+.+.+.++..+
T Consensus 22 L~-~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~-- 97 (338)
T PRK12475 22 IR-EKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVE-- 97 (338)
T ss_pred hc-CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcE--
Confidence 45 678999987 8899999999999997 788888863 244555666666555433
Q ss_pred CCCCceEEEEecCC
Q 034737 61 LGFPSAMFIRCDVT 74 (85)
Q Consensus 61 ~~~~~~~~~~~Dv~ 74 (85)
+..+..|++
T Consensus 98 -----i~~~~~~~~ 106 (338)
T PRK12475 98 -----IVPVVTDVT 106 (338)
T ss_pred -----EEEEeccCC
Confidence 666666765
No 306
>PRK04148 hypothetical protein; Provisional
Probab=97.64 E-value=0.00022 Score=39.80 Aligned_cols=55 Identities=18% Similarity=0.112 Sum_probs=42.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTK 77 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 77 (85)
++.++..|++ .|..++..|.+.|++|+.+|.++...+.+.+. . +.++..|+.+++
T Consensus 17 ~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~---------~~~v~dDlf~p~ 71 (134)
T PRK04148 17 NKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------G---------LNAFVDDLFNPN 71 (134)
T ss_pred CCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------C---------CeEEECcCCCCC
Confidence 4678888876 66788999999999999999999755444332 1 678889998765
No 307
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.63 E-value=0.00043 Score=38.85 Aligned_cols=45 Identities=29% Similarity=0.440 Sum_probs=37.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALVE 51 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l~ 51 (85)
++.++++|+ +++|..+++.|...| ..|.+++|+.++.+...+.+.
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~ 64 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG 64 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence 678999988 899999999999986 789999999877777665554
No 308
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.63 E-value=0.00017 Score=42.43 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=43.5
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
.+-|.|+++-.|..+++....+|+.|+.+.|++.+...... +...+.|+.|+.+
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~-----------------~~i~q~Difd~~~ 55 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQG-----------------VTILQKDIFDLTS 55 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccccc-----------------ceeecccccChhh
Confidence 36678999999999999999999999999999876544311 5567777777776
No 309
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.61 E-value=0.00033 Score=44.96 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=58.7
Q ss_pred EEEEecCCChHHHHHHHHHHh----CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHh
Q 034737 8 SAFVTGGASGIGRALSLALAG----KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~----~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
-++|-|+++.-|.-+++.+.. .+..+.+..||+.++++..+.+.+..+. +-+...++.+|.+|+++ .+++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~-----~ls~~~i~i~D~~n~~Sl~ema 81 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGT-----DLSSSVILIADSANEASLDEMA 81 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCC-----CcccceEEEecCCCHHHHHHHH
Confidence 489999999999999999998 7788999999999998888777665432 12224489999999999 9887
Q ss_pred hh
Q 034737 83 LR 84 (85)
Q Consensus 83 ~~ 84 (85)
++
T Consensus 82 k~ 83 (423)
T KOG2733|consen 82 KQ 83 (423)
T ss_pred hh
Confidence 64
No 310
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.60 E-value=0.00056 Score=49.92 Aligned_cols=69 Identities=10% Similarity=0.062 Sum_probs=44.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCC----CEEEEEecCccchHH---HHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKG----VFVTVVDLSEEKGNE---VAALVEKENAKFHSNLGFPSAMFIRCDVTNT 76 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g----~~v~~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~ 76 (85)
.+++++||+++.||.+++++|+..+ ++|++..|+...... +...+...+. .. .....++.++.+|++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~-~~-~~~~~~i~~~~gDl~~~ 1046 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI-WD-EEWASRIEVVLGDLSKE 1046 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC-Cc-hhhhcceEEEeccCCCc
Confidence 4789999999999999999999887 688888887543222 2111111110 00 00112488999999754
No 311
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.56 E-value=0.00056 Score=44.62 Aligned_cols=59 Identities=20% Similarity=0.268 Sum_probs=44.2
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALA 81 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~ 81 (85)
.++|.|+ +.+|+.+++.|..+|+.+++++++++..+...+.. . +.++.+|.+++.. +++
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~---------~~~~~gd~~~~~~l~~~ 61 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----D---------VRTVVGNGSSPDVLREA 61 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----C---------EEEEEeCCCCHHHHHHc
Confidence 5788887 99999999999999999999999987655543311 1 5666777776665 443
No 312
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.50 E-value=0.00051 Score=45.59 Aligned_cols=45 Identities=18% Similarity=0.340 Sum_probs=38.0
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL 49 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 49 (85)
+. ++.++++|+ +|+|++++..|...|++|++.+|+.++.+.+.+.
T Consensus 330 ~~-~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~ 374 (477)
T PRK09310 330 LN-NQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR 374 (477)
T ss_pred cC-CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 45 789999996 7999999999999999999999988766665544
No 313
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.47 E-value=0.0014 Score=40.87 Aligned_cols=47 Identities=23% Similarity=0.301 Sum_probs=40.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKE 53 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~ 53 (85)
++.++|.|+ ||.|++++..|...|+ +|.+++|+.++.+.+.+.+...
T Consensus 127 ~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~ 174 (284)
T PRK12549 127 LERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR 174 (284)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 678999977 8899999999999997 7999999998888888777543
No 314
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.41 E-value=0.00033 Score=42.25 Aligned_cols=29 Identities=21% Similarity=0.322 Sum_probs=24.5
Q ss_pred EEec-CCChHHHHHHHHHHhCCCEEEEEec
Q 034737 10 FVTG-GASGIGRALSLALAGKGVFVTVVDL 38 (85)
Q Consensus 10 litG-~~~gig~~~~~~l~~~g~~v~~~~~ 38 (85)
.||. +++|||++++++|+.+|++|+++++
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~ 47 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTT 47 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcC
Confidence 3444 5679999999999999999998875
No 315
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.37 E-value=0.0027 Score=37.62 Aligned_cols=35 Identities=34% Similarity=0.582 Sum_probs=29.8
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS 39 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 39 (85)
|. ++.++|.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus 19 l~-~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 19 LL-NSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred hc-CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 44 677888875 8999999999999997 78888876
No 316
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.33 E-value=0.0016 Score=44.60 Aligned_cols=29 Identities=21% Similarity=0.261 Sum_probs=26.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEE
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVT 34 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~ 34 (85)
.+.++|||++|.||+++++.|..+|+.|.
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~ 408 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYE 408 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence 45799999999999999999999999884
No 317
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.31 E-value=0.0046 Score=39.50 Aligned_cols=35 Identities=31% Similarity=0.451 Sum_probs=30.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS 39 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 39 (85)
|. .+.++|.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus 22 L~-~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 22 LR-EKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred hc-CCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 44 677899987 8999999999999998 79999876
No 318
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=97.30 E-value=0.0018 Score=42.93 Aligned_cols=67 Identities=13% Similarity=0.215 Sum_probs=43.7
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC---EEEEEecCcc---chHHHHHH--------HHHHhhhccCCCCCCceEEEEe
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV---FVTVVDLSEE---KGNEVAAL--------VEKENAKFHSNLGFPSAMFIRC 71 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~~~---~~~~~~~~--------l~~~~~~~~~~~~~~~~~~~~~ 71 (85)
+|++++||++|++|+.+.+.|++.-. ++.+.-|... ..++...+ +.+.++. -..++..+.+
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~-----~l~Kv~pi~G 86 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPE-----ALEKVVPIAG 86 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCcc-----ceecceeccc
Confidence 89999999999999999999998654 4566655432 22222222 2222111 2245888888
Q ss_pred cCCCHH
Q 034737 72 DVTNTK 77 (85)
Q Consensus 72 Dv~~~~ 77 (85)
|+++++
T Consensus 87 Di~~~~ 92 (467)
T KOG1221|consen 87 DISEPD 92 (467)
T ss_pred cccCcc
Confidence 988754
No 319
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=97.26 E-value=0.0028 Score=35.70 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=36.9
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|.+.-.|+.++..|.++|+.|.+++++...++.
T Consensus 25 ~~~-gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 25 RLD-GKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCC-CCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 467 9999999999999999999999999999999865544443
No 320
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.24 E-value=0.0032 Score=41.14 Aligned_cols=59 Identities=22% Similarity=0.380 Sum_probs=45.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
.+.++|.|+ +.+|+.+++.|...|+.|++++++++..+...+.. .. +.++.+|.++++.
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~----~~---------~~~i~gd~~~~~~ 289 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL----PN---------TLVLHGDGTDQEL 289 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC----CC---------CeEEECCCCCHHH
Confidence 568999988 89999999999999999999999987665544422 22 5567777777665
No 321
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.23 E-value=0.0024 Score=36.99 Aligned_cols=42 Identities=24% Similarity=0.344 Sum_probs=35.0
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++. ++.++|.|++.-.|..+++.|..+|++|.++.|+.+.+.
T Consensus 41 ~l~-gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~ 82 (168)
T cd01080 41 DLA-GKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLK 82 (168)
T ss_pred CCC-CCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHH
Confidence 356 899999999666799999999999999999988864443
No 322
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.22 E-value=0.0014 Score=44.10 Aligned_cols=56 Identities=18% Similarity=0.264 Sum_probs=42.9
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
.+++|.|+ +.+|+.+++.|.++|.+++++|.|+++.+...+ . . ...+.+|.+|++.
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~--g---------~~~i~GD~~~~~~ 473 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R--G---------IRAVLGNAANEEI 473 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C--C---------CeEEEcCCCCHHH
Confidence 35677766 788999999999999999999999876665543 1 1 5667777777665
No 323
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.22 E-value=0.0022 Score=38.35 Aligned_cols=42 Identities=33% Similarity=0.388 Sum_probs=35.6
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL 49 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 49 (85)
.+.|.|+++.+|.+++..|.+.|++|++.+|++++.+.....
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 477888889999999999999999999999988776665543
No 324
>PRK06849 hypothetical protein; Provisional
Probab=97.19 E-value=0.0024 Score=41.16 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=33.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE 41 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 41 (85)
.++++|||+...++..+++.|.+.|++|++++.++.
T Consensus 4 ~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 4 KKTVLITGARAPAALELARLFHNAGHTVILADSLKY 39 (389)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 679999999999999999999999999999988754
No 325
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=97.14 E-value=0.002 Score=36.88 Aligned_cols=43 Identities=35% Similarity=0.562 Sum_probs=35.8
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHH
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKE 53 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~ 53 (85)
++++|..+-+|++++..|+++|.+|+++ +.+..+.+..++...
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~~ 43 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPEE 43 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCHH
Confidence 4789999999999999999999999888 556677777666543
No 326
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.14 E-value=0.0024 Score=39.85 Aligned_cols=40 Identities=20% Similarity=0.190 Sum_probs=34.8
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
+. +++++|.|. +++|+.+++.|...|++|++.+|+++...
T Consensus 149 l~-gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~ 188 (287)
T TIGR02853 149 IH-GSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA 188 (287)
T ss_pred CC-CCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 55 899999988 77999999999999999999999876543
No 327
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.13 E-value=0.0022 Score=40.25 Aligned_cols=43 Identities=23% Similarity=0.324 Sum_probs=35.8
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA 47 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~ 47 (85)
+|.+++|+|+++++|..+++.....|++|+.+++++++.+.+.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK 193 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4789999999999999999888889999988888776544443
No 328
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.12 E-value=0.011 Score=34.76 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=26.6
Q ss_pred CcEEEEecCC----------------ChHHHHHHHHHHhCCCEEEEEecC
Q 034737 6 GLSAFVTGGA----------------SGIGRALSLALAGKGVFVTVVDLS 39 (85)
Q Consensus 6 ~~~~litG~~----------------~gig~~~~~~l~~~g~~v~~~~~~ 39 (85)
||.++||+|+ |-.|.++++.+..+|++|+++...
T Consensus 3 gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~ 52 (185)
T PF04127_consen 3 GKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGP 52 (185)
T ss_dssp T-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-T
T ss_pred CCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecC
Confidence 7788888765 569999999999999999888654
No 329
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.11 E-value=0.0032 Score=39.15 Aligned_cols=47 Identities=34% Similarity=0.458 Sum_probs=39.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVE 51 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~ 51 (85)
+. ++.++|.|+ +|.+++++..|...|+ +|.++.|+.++.+.+.+.+.
T Consensus 123 ~~-~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~ 170 (282)
T TIGR01809 123 LA-GFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV 170 (282)
T ss_pred cC-CceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence 34 788888876 8999999999999997 69999999888888776653
No 330
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.05 E-value=0.0038 Score=38.98 Aligned_cols=48 Identities=33% Similarity=0.533 Sum_probs=41.9
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHHHHh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVEKEN 54 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~~~~ 54 (85)
++.++|.|+ +|-+++++..|+..|+ +|.++.|+.++++++.+.+...+
T Consensus 126 ~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~ 174 (283)
T COG0169 126 GKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG 174 (283)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc
Confidence 678999976 8889999999999995 79999999999999988887554
No 331
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.04 E-value=0.0031 Score=39.40 Aligned_cols=42 Identities=24% Similarity=0.210 Sum_probs=34.7
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV 46 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~ 46 (85)
++.+++|+|+++++|..+++.....|++|+.+++++++.+.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~ 179 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL 179 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 478999999999999999988888999998888776554433
No 332
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.04 E-value=0.0048 Score=38.63 Aligned_cols=40 Identities=28% Similarity=0.387 Sum_probs=35.3
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK 42 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 42 (85)
++. |+.++|.|.+.-+|+.++..|..+|+.|+++.+....
T Consensus 155 ~l~-Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~ 194 (286)
T PRK14175 155 DLE-GKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKD 194 (286)
T ss_pred CCC-CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh
Confidence 467 9999999999999999999999999999988876543
No 333
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.03 E-value=0.002 Score=42.08 Aligned_cols=43 Identities=21% Similarity=0.360 Sum_probs=38.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 48 (85)
-..++|+|++|.+|+.+++.|.++|..|..+-|+.++.+....
T Consensus 79 ~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 79 PTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 4589999999999999999999999999999999877666544
No 334
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=97.02 E-value=0.0048 Score=35.96 Aligned_cols=43 Identities=28% Similarity=0.347 Sum_probs=33.5
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHH
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEK 52 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~ 52 (85)
+.|.|+ |-+|..++..++..|++|++.+++++.++...+.+..
T Consensus 2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~ 44 (180)
T PF02737_consen 2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER 44 (180)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence 456666 8999999999999999999999998876666555543
No 335
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.01 E-value=0.0031 Score=40.03 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=35.2
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV 46 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~ 46 (85)
++.+++|.|+++++|...++.....|++|+.+++++++.+.+
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~ 199 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 199 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 478999999999999999988888999998888777655444
No 336
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.01 E-value=0.0032 Score=39.49 Aligned_cols=41 Identities=22% Similarity=0.100 Sum_probs=34.0
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVA 47 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~ 47 (85)
.+++|+|+++++|...++.....|+ +|+.+++++++.+.+.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~ 197 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLK 197 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 7999999999999999888888898 7988888766554443
No 337
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=96.98 E-value=0.0039 Score=38.16 Aligned_cols=39 Identities=36% Similarity=0.409 Sum_probs=34.0
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG 43 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 43 (85)
++.+++|+|+++++|..+++.+...|++|++++++.+..
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~ 177 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKL 177 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence 478999999999999999999999999998888775443
No 338
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.97 E-value=0.0049 Score=38.85 Aligned_cols=43 Identities=26% Similarity=0.339 Sum_probs=36.6
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.+.+.|.++-+|+.++..|+++|+.|.++.+.......
T Consensus 156 ~l~-Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e 198 (301)
T PRK14194 156 DLT-GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKA 198 (301)
T ss_pred CCC-CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHH
Confidence 467 9999999999999999999999999999999776544333
No 339
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=96.97 E-value=0.0042 Score=38.62 Aligned_cols=41 Identities=24% Similarity=0.216 Sum_probs=34.2
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++.+++|+|+++++|..+++.....|++|+.+++++++.+.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~ 183 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAW 183 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 47899999999999999988888899999888877654433
No 340
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.96 E-value=0.0051 Score=38.38 Aligned_cols=45 Identities=29% Similarity=0.466 Sum_probs=38.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALVE 51 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l~ 51 (85)
++.++|.|+ ||-+++++-.|+..|+ +|.++.|+.++.+.+.+.+.
T Consensus 127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~ 172 (283)
T PRK14027 127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN 172 (283)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence 678999987 8899999999999997 68899999888888777654
No 341
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.95 E-value=0.014 Score=35.16 Aligned_cols=63 Identities=24% Similarity=0.286 Sum_probs=43.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLG 62 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 62 (85)
|. ++.++|.|+ +|+|..+++.|+..|. +++++|.+ ..+.+.+.+.+.+.++..+
T Consensus 19 L~-~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~---- 92 (228)
T cd00757 19 LK-NARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVE---- 92 (228)
T ss_pred Hh-CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCE----
Confidence 44 678888875 8999999999999997 56677543 2345666666666655432
Q ss_pred CCceEEEEecCC
Q 034737 63 FPSAMFIRCDVT 74 (85)
Q Consensus 63 ~~~~~~~~~Dv~ 74 (85)
+..+..+++
T Consensus 93 ---i~~~~~~i~ 101 (228)
T cd00757 93 ---IEAYNERLD 101 (228)
T ss_pred ---EEEecceeC
Confidence 555555553
No 342
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.94 E-value=0.0049 Score=35.54 Aligned_cols=39 Identities=31% Similarity=0.463 Sum_probs=30.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK 42 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 42 (85)
.+. ||+++|.|- +-+|+.+|++|...|++|++++.++-.
T Consensus 20 ~l~-Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~ 58 (162)
T PF00670_consen 20 MLA-GKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIR 58 (162)
T ss_dssp --T-TSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHH
T ss_pred eeC-CCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHH
Confidence 356 899999976 789999999999999999999999843
No 343
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=96.93 E-value=0.005 Score=39.40 Aligned_cols=44 Identities=30% Similarity=0.308 Sum_probs=37.3
Q ss_pred CCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737 4 KPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48 (85)
Q Consensus 4 ~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 48 (85)
.+|+++.|+|.. |+|...++.....|++|+.+++++++.+.+.+
T Consensus 165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~ 208 (339)
T COG1064 165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK 208 (339)
T ss_pred CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH
Confidence 358999999997 99988888888899999999999987766554
No 344
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.93 E-value=0.023 Score=34.75 Aligned_cols=35 Identities=43% Similarity=0.561 Sum_probs=29.0
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS 39 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 39 (85)
|. ++.++|.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus 30 L~-~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 30 LK-AARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred hc-CCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 44 678899988 9999999999999996 57777654
No 345
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.92 E-value=0.0036 Score=41.00 Aligned_cols=39 Identities=23% Similarity=0.291 Sum_probs=34.2
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE 41 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 41 (85)
|.+. ++.++|+|.+ ++|.++++.|..+|+.|.+.+....
T Consensus 1 ~~~~-~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~ 39 (445)
T PRK04308 1 MTFQ-NKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK 39 (445)
T ss_pred CCCC-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6777 8999999975 8999999999999999999987654
No 346
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=96.91 E-value=0.005 Score=38.16 Aligned_cols=40 Identities=30% Similarity=0.302 Sum_probs=34.4
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++..++|+|+++++|..+++.+...|.+|+++.+++++.+
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~ 201 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK 201 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence 3678999999999999999999999999988887765433
No 347
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.90 E-value=0.0045 Score=39.26 Aligned_cols=42 Identities=38% Similarity=0.452 Sum_probs=33.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
+.++.++||+|+++|+|...++.....|+.++++..++++.+
T Consensus 140 l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~ 181 (326)
T COG0604 140 LKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE 181 (326)
T ss_pred CCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence 445789999999999999999988889977666666554444
No 348
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.90 E-value=0.013 Score=37.84 Aligned_cols=50 Identities=26% Similarity=0.388 Sum_probs=38.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAK 56 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~ 56 (85)
++.++|.|+ +|+|..+++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++.
T Consensus 135 ~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 204 (376)
T PRK08762 135 EARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPD 204 (376)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCC
Confidence 567777766 8999999999999998 68888886 34566667777666554
No 349
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=96.90 E-value=0.0052 Score=37.67 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=35.1
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
+++.++|+|+++++|..+++.+...|.+|+++++++++.+.
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 184 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAEL 184 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 47899999999999999999999999999998887654433
No 350
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.90 E-value=0.024 Score=31.29 Aligned_cols=61 Identities=21% Similarity=0.339 Sum_probs=44.6
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS 65 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~ 65 (85)
++.+++.|+ +++|..+++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~------- 73 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVE------- 73 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSE-------
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCcee-------
Confidence 457888876 8999999999999998 68888763 2356667777777665533
Q ss_pred eEEEEecCC
Q 034737 66 AMFIRCDVT 74 (85)
Q Consensus 66 ~~~~~~Dv~ 74 (85)
+..+..+++
T Consensus 74 v~~~~~~~~ 82 (135)
T PF00899_consen 74 VEAIPEKID 82 (135)
T ss_dssp EEEEESHCS
T ss_pred eeeeecccc
Confidence 677777773
No 351
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=96.89 E-value=0.0023 Score=38.66 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=25.8
Q ss_pred EEEEecCC-ChHHHHHHHHHHhCCCEEEEEecC
Q 034737 8 SAFVTGGA-SGIGRALSLALAGKGVFVTVVDLS 39 (85)
Q Consensus 8 ~~litG~~-~gig~~~~~~l~~~g~~v~~~~~~ 39 (85)
+-.||..+ |++|.++++.|+.+|++|++++++
T Consensus 17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred ceeecCccchHHHHHHHHHHHhCCCEEEEEECc
Confidence 44566544 459999999999999999998764
No 352
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.87 E-value=0.0062 Score=35.35 Aligned_cols=39 Identities=31% Similarity=0.327 Sum_probs=33.6
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG 43 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 43 (85)
+. ++++.|.|. |.||+.+++.+...|++|+..++.....
T Consensus 34 l~-g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~ 72 (178)
T PF02826_consen 34 LR-GKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE 72 (178)
T ss_dssp ST-TSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred cC-CCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence 56 899999976 8999999999999999999999987543
No 353
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.86 E-value=0.00011 Score=44.36 Aligned_cols=30 Identities=23% Similarity=0.401 Sum_probs=23.6
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCC
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKG 30 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g 30 (85)
|++..++++++||+++|||..++..+...+
T Consensus 1 m~~~~r~villTGaSrgiG~~~v~~i~aed 30 (253)
T KOG1204|consen 1 MDLNMRKVILLTGASRGIGTGSVATILAED 30 (253)
T ss_pred CCcccceEEEEecCCCCccHHHHHHHHhcc
Confidence 555547899999999999988777766543
No 354
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=96.86 E-value=0.0071 Score=37.44 Aligned_cols=40 Identities=33% Similarity=0.356 Sum_probs=34.7
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++..++|+|+++++|..+++.+...|++++++++++++.+
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~ 205 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE 205 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 3778999999999999999999999999998888765443
No 355
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.85 E-value=0.022 Score=30.01 Aligned_cols=59 Identities=31% Similarity=0.352 Sum_probs=41.1
Q ss_pred CCcEEEEecCCChHHHHHHHHHHh--CCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecC
Q 034737 5 PGLSAFVTGGASGIGRALSLALAG--KGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDV 73 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~--~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv 73 (85)
|+..++-.|++.| .++..|++ .+.+|+.++.++...+.+.+........ +++.++..|+
T Consensus 1 p~~~vLDlGcG~G---~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~-------~~i~~~~~d~ 61 (112)
T PF12847_consen 1 PGGRVLDLGCGTG---RLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLS-------DRITFVQGDA 61 (112)
T ss_dssp TTCEEEEETTTTS---HHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTT-------TTEEEEESCC
T ss_pred CCCEEEEEcCcCC---HHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCC-------CCeEEEECcc
Confidence 4678888887766 23344444 7899999999998777777766332222 3388888888
No 356
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.84 E-value=0.0057 Score=35.19 Aligned_cols=43 Identities=28% Similarity=0.456 Sum_probs=33.3
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|.+.-+|+.++..|.++++.|.++......+++
T Consensus 33 ~l~-Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~ 75 (160)
T PF02882_consen 33 DLE-GKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE 75 (160)
T ss_dssp STT-T-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred CCC-CCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence 466 9999999999999999999999999999998776554444
No 357
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.83 E-value=0.0053 Score=40.47 Aligned_cols=39 Identities=33% Similarity=0.502 Sum_probs=33.3
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV 46 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~ 46 (85)
.+.|.|+.|.+|..+++.|...|++|++.+|+++.....
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~ 40 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV 40 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence 578899889999999999999999999999987654433
No 358
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.80 E-value=0.0081 Score=31.07 Aligned_cols=37 Identities=38% Similarity=0.437 Sum_probs=31.1
Q ss_pred CCChHHHHHHHHHHhCC---CEEEEE-ecCccchHHHHHHH
Q 034737 14 GASGIGRALSLALAGKG---VFVTVV-DLSEEKGNEVAALV 50 (85)
Q Consensus 14 ~~~gig~~~~~~l~~~g---~~v~~~-~~~~~~~~~~~~~l 50 (85)
|+|.+|.++++.|...| .+|.++ .|++++.+.+.++.
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 66999999999999999 889855 89988777776654
No 359
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.77 E-value=0.0068 Score=34.67 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=30.0
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD 37 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~ 37 (85)
++. |+.++|.|+ |.+|...++.|+..|++|.+++
T Consensus 10 ~l~-~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 10 NLH-NKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EcC-CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 466 899999987 7889999999999999998884
No 360
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=96.76 E-value=0.0057 Score=30.94 Aligned_cols=33 Identities=30% Similarity=0.405 Sum_probs=21.4
Q ss_pred cEEEEecCCChHHHHHHHHHH-hCCCEEEEEecC
Q 034737 7 LSAFVTGGASGIGRALSLALA-GKGVFVTVVDLS 39 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~-~~g~~v~~~~~~ 39 (85)
|.+||+|+++|.|.+....++ ..|++.+.+...
T Consensus 40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE 73 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE 73 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence 789999999999998544444 567777766543
No 361
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.75 E-value=0.0018 Score=38.93 Aligned_cols=43 Identities=23% Similarity=0.118 Sum_probs=33.7
Q ss_pred HHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HHHhhh
Q 034737 22 LSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-ALAFLR 84 (85)
Q Consensus 22 ~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~~~~~ 84 (85)
++++|+++|++|++++|+++..+ + ..++++|++|.++ ++++++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~---------------~~~~~~Dl~~~~~v~~~~~~ 44 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----L---------------DGFIQADLGDPASIDAAVAA 44 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----h---------------hHhhcccCCCHHHHHHHHHH
Confidence 47889999999999999876431 0 2457899999999 888764
No 362
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.74 E-value=0.019 Score=34.20 Aligned_cols=37 Identities=22% Similarity=0.317 Sum_probs=31.6
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 40 (85)
++. ++.++|.|+ |.+|..-++.|++.|++|++++.+.
T Consensus 6 ~l~-gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~ 42 (205)
T TIGR01470 6 NLE-GRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL 42 (205)
T ss_pred EcC-CCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 466 899999987 7788999999999999999887654
No 363
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.74 E-value=0.0073 Score=41.27 Aligned_cols=58 Identities=14% Similarity=0.102 Sum_probs=44.6
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-HH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-AL 80 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~~ 80 (85)
.+++|.|. +.+|+.+++.|.++|..++++|.|++..+...+ . . ...+.+|.++++- ++
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~--g---------~~v~~GDat~~~~L~~ 459 (601)
T PRK03659 401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK----Y--G---------YKVYYGDATQLELLRA 459 (601)
T ss_pred CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----C--C---------CeEEEeeCCCHHHHHh
Confidence 46777765 778999999999999999999999876665432 1 1 5678888888776 54
No 364
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.72 E-value=0.032 Score=34.04 Aligned_cols=50 Identities=26% Similarity=0.346 Sum_probs=36.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc-------------------cchHHHHHHHHHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE-------------------EKGNEVAALVEKENAK 56 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~l~~~~~~ 56 (85)
+..++|.|+ +|+|..+++.|+..|. +++++|.+. .+.+.+.+.+.+.++.
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~ 93 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPH 93 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCC
Confidence 567888876 8999999999999986 577776541 3455556666666554
No 365
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=96.71 E-value=0.024 Score=33.92 Aligned_cols=33 Identities=30% Similarity=0.527 Sum_probs=28.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecC
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLS 39 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~ 39 (85)
...++|.|+ +|+|..+++.|+..|.. ++++|.+
T Consensus 28 ~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 667888876 89999999999999974 8888876
No 366
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=96.71 E-value=0.0094 Score=39.13 Aligned_cols=39 Identities=26% Similarity=0.382 Sum_probs=34.0
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
|++++|.|+ |.||+.++..+...|++|+++++++.+...
T Consensus 202 GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~ 240 (413)
T cd00401 202 GKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQ 240 (413)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHH
Confidence 889999987 689999999999999999999988765444
No 367
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.71 E-value=0.013 Score=36.71 Aligned_cols=39 Identities=23% Similarity=0.491 Sum_probs=34.0
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE 41 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 41 (85)
++. ||.++|.|.+.-.|+.++..|..+|+.|.++.....
T Consensus 154 ~l~-Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~ 192 (285)
T PRK14191 154 EIK-GKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK 192 (285)
T ss_pred CCC-CCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH
Confidence 466 999999999999999999999999999988765443
No 368
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=96.69 E-value=0.025 Score=36.60 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=33.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA 47 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~ 47 (85)
++.++|.|+ |.+|...++.+...|++|+++++++++.+.+.
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~ 207 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLD 207 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence 456788877 78999999999999999999999876655443
No 369
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.69 E-value=0.0034 Score=33.33 Aligned_cols=37 Identities=30% Similarity=0.387 Sum_probs=31.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 40 (85)
+++ ++.++|.|+ |.+|..-++.|++.|++|.++....
T Consensus 4 ~l~-~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 4 DLK-GKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp --T-T-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EcC-CCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 567 999999988 8899999999999999999998775
No 370
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.69 E-value=0.0082 Score=39.32 Aligned_cols=44 Identities=25% Similarity=0.421 Sum_probs=36.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAA 48 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~ 48 (85)
+. +++++|.|+ |.+|..+++.|...| .+|++++|+.++......
T Consensus 178 l~-~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~ 222 (417)
T TIGR01035 178 LK-GKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAK 222 (417)
T ss_pred cc-CCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence 44 789999987 999999999999999 689999998776555444
No 371
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.69 E-value=0.0089 Score=39.23 Aligned_cols=46 Identities=11% Similarity=0.216 Sum_probs=38.5
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALV 50 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l 50 (85)
+. ++.+++.|+ |++|+.+++.|...|+ +++++.|+.++++.+.+.+
T Consensus 179 l~-~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~ 225 (414)
T PRK13940 179 IS-SKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF 225 (414)
T ss_pred cc-CCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence 45 889999988 9999999999999996 6888889887777666654
No 372
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.69 E-value=0.034 Score=33.04 Aligned_cols=33 Identities=24% Similarity=0.488 Sum_probs=29.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS 39 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 39 (85)
.+.++|.|+ +|+|..++..|+..|. +++++|.+
T Consensus 21 ~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 667888877 8999999999999998 69999887
No 373
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.68 E-value=0.0058 Score=36.32 Aligned_cols=36 Identities=17% Similarity=0.364 Sum_probs=31.8
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS 39 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 39 (85)
++. +|.++|.|+ |.+|...++.|+..|++|+++.+.
T Consensus 7 ~l~-~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~ 42 (202)
T PRK06718 7 DLS-NKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE 42 (202)
T ss_pred EcC-CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence 467 999999988 889999999999999999888654
No 374
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=96.67 E-value=0.011 Score=39.05 Aligned_cols=39 Identities=23% Similarity=0.348 Sum_probs=34.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG 43 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 43 (85)
+. |++++|.|. |.||+.++..+...|++|+++++++.+.
T Consensus 210 l~-Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra 248 (425)
T PRK05476 210 IA-GKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA 248 (425)
T ss_pred CC-CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence 45 899999997 7899999999999999999999887553
No 375
>PRK08223 hypothetical protein; Validated
Probab=96.66 E-value=0.024 Score=35.58 Aligned_cols=61 Identities=21% Similarity=0.293 Sum_probs=42.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS 65 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~ 65 (85)
+..++|.|+ +|+|..+++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++..+
T Consensus 27 ~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~------- 98 (287)
T PRK08223 27 NSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELE------- 98 (287)
T ss_pred cCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCE-------
Confidence 667888877 8999999999999997 57777664 2345556666666555432
Q ss_pred eEEEEecCC
Q 034737 66 AMFIRCDVT 74 (85)
Q Consensus 66 ~~~~~~Dv~ 74 (85)
+..+...++
T Consensus 99 V~~~~~~l~ 107 (287)
T PRK08223 99 IRAFPEGIG 107 (287)
T ss_pred EEEEecccC
Confidence 555555554
No 376
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.66 E-value=0.012 Score=36.86 Aligned_cols=42 Identities=24% Similarity=0.377 Sum_probs=35.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++. ||+++|.|.+.-+|+.++..|..+|+.|.++......+.
T Consensus 155 ~l~-Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~ 196 (285)
T PRK14189 155 PLR-GAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA 196 (285)
T ss_pred CCC-CCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH
Confidence 466 999999999999999999999999999988765544333
No 377
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.62 E-value=0.033 Score=35.84 Aligned_cols=63 Identities=25% Similarity=0.313 Sum_probs=45.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCc-------------------cchHHHHHHHHHHhhhccCCCC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSE-------------------EKGNEVAALVEKENAKFHSNLG 62 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~-------------------~~~~~~~~~l~~~~~~~~~~~~ 62 (85)
|. +..++|.|+ +|+|..+++.|+..|. ++.++|.+. .+.+.+.+.+.+.++...
T Consensus 26 L~-~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~---- 99 (355)
T PRK05597 26 LF-DAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVK---- 99 (355)
T ss_pred Hh-CCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcE----
Confidence 44 678899987 8999999999999997 577777642 356667777776666533
Q ss_pred CCceEEEEecCC
Q 034737 63 FPSAMFIRCDVT 74 (85)
Q Consensus 63 ~~~~~~~~~Dv~ 74 (85)
+..+...++
T Consensus 100 ---v~~~~~~i~ 108 (355)
T PRK05597 100 ---VTVSVRRLT 108 (355)
T ss_pred ---EEEEEeecC
Confidence 555555555
No 378
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.61 E-value=0.015 Score=36.41 Aligned_cols=43 Identities=33% Similarity=0.391 Sum_probs=36.5
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++.+....++.
T Consensus 156 ~l~-Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~ 198 (285)
T PRK10792 156 DTY-GLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH 198 (285)
T ss_pred CCC-CCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence 466 9999999999999999999999999999988776544433
No 379
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.60 E-value=0.011 Score=36.38 Aligned_cols=39 Identities=26% Similarity=0.302 Sum_probs=33.9
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
+.+++|+|+++++|..++..+...|+++++++++.++.+
T Consensus 145 ~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~ 183 (328)
T cd08268 145 GDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD 183 (328)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 678999999999999999999999999998887765433
No 380
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.60 E-value=0.04 Score=35.72 Aligned_cols=63 Identities=24% Similarity=0.323 Sum_probs=43.5
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLG 62 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 62 (85)
|. +..++|.|+ +|+|..+++.|+..|. +++++|.+ ..+.+.+.+.+.+.++..+
T Consensus 39 l~-~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~---- 112 (370)
T PRK05600 39 LH-NARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIR---- 112 (370)
T ss_pred hc-CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCe----
Confidence 44 667888876 8999999999999996 68888765 2345555666665554422
Q ss_pred CCceEEEEecCC
Q 034737 63 FPSAMFIRCDVT 74 (85)
Q Consensus 63 ~~~~~~~~~Dv~ 74 (85)
+..+...++
T Consensus 113 ---i~~~~~~i~ 121 (370)
T PRK05600 113 ---VNALRERLT 121 (370)
T ss_pred ---eEEeeeecC
Confidence 555555554
No 381
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.59 E-value=0.011 Score=38.84 Aligned_cols=45 Identities=33% Similarity=0.479 Sum_probs=36.9
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAAL 49 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~ 49 (85)
+. +++++|.|+ |.+|..+++.|...|+ +|++++|+.++...+...
T Consensus 180 ~~-~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~ 225 (423)
T PRK00045 180 LS-GKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE 225 (423)
T ss_pred cc-CCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence 45 788999977 9999999999999997 788999988766655544
No 382
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.59 E-value=0.011 Score=35.53 Aligned_cols=42 Identities=29% Similarity=0.253 Sum_probs=31.0
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCc-cchHHHHHHH
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE-EKGNEVAALV 50 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~l 50 (85)
.+..+|++.||.+++++|...|+.|++..|+. +..+.+.+.+
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l 45 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL 45 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh
Confidence 34456779999999999999999998886554 4444444443
No 383
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.56 E-value=0.022 Score=35.57 Aligned_cols=43 Identities=23% Similarity=0.230 Sum_probs=34.8
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV 50 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l 50 (85)
+.+-|.|+ +-+|..++..++..|+.|++.+++++.++...+.+
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i 48 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRI 48 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence 35666665 78999999999999999999999998777655443
No 384
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.55 E-value=0.017 Score=36.25 Aligned_cols=40 Identities=30% Similarity=0.341 Sum_probs=33.4
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 48 (85)
.+.|.| .|-+|.+++..|+..|++|++.+++++..+....
T Consensus 4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~ 43 (308)
T PRK06129 4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPA 43 (308)
T ss_pred EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHH
Confidence 577887 5789999999999999999999999876665443
No 385
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.55 E-value=0.012 Score=40.43 Aligned_cols=56 Identities=18% Similarity=0.195 Sum_probs=43.9
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF 78 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 78 (85)
+.++|.|+ +.+|+.+++.|.++|.++++++.|+++.+...+ . . ...+.+|.++++-
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~--g---------~~v~~GDat~~~~ 456 (621)
T PRK03562 401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK----F--G---------MKVFYGDATRMDL 456 (621)
T ss_pred CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----c--C---------CeEEEEeCCCHHH
Confidence 46777776 678999999999999999999999987666543 1 1 5667788887765
No 386
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.54 E-value=0.02 Score=42.57 Aligned_cols=70 Identities=16% Similarity=0.154 Sum_probs=51.6
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCcc---chHHHHHHHHHHhhhccCCCCCCceEEEEecCCCHHH-H
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEE---KGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNTKF-A 79 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~~~-~ 79 (85)
+.|..+++|+-+|.|..++..|..+|++ +++..|+-= ....+...++.++-. +.+-..|++..+. .
T Consensus 1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVq---------V~vsT~nitt~~ga~ 1837 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQ---------VQVSTSNITTAEGAR 1837 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeE---------EEEecccchhhhhHH
Confidence 4689999999999999999999999996 556666532 233455566666544 6666678887777 7
Q ss_pred HHhh
Q 034737 80 LAFL 83 (85)
Q Consensus 80 ~~~~ 83 (85)
.+++
T Consensus 1838 ~Li~ 1841 (2376)
T KOG1202|consen 1838 GLIE 1841 (2376)
T ss_pred HHHH
Confidence 7665
No 387
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.54 E-value=0.016 Score=36.48 Aligned_cols=38 Identities=26% Similarity=0.448 Sum_probs=33.8
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe-cCc
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD-LSE 40 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~-~~~ 40 (85)
++. ||.+++.|.++-.|+.++..|+++|+.|.++. |..
T Consensus 155 ~~~-Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLS-GLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCC-CCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 466 99999999999999999999999999999885 543
No 388
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.52 E-value=0.0096 Score=36.70 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=29.8
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK 42 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 42 (85)
.++|+||++- |+.+++.|.+.|+.|+...+++..
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~ 35 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG 35 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc
Confidence 5899999887 999999999999999988877643
No 389
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.50 E-value=0.013 Score=36.41 Aligned_cols=44 Identities=30% Similarity=0.437 Sum_probs=36.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALV 50 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l 50 (85)
++.++|.|+ +|-+++++..|...|+ +|.++.|+.++.+.+.+.+
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 457888875 8999999999999997 5999999998877776544
No 390
>PLN02494 adenosylhomocysteinase
Probab=96.49 E-value=0.016 Score=38.75 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=33.4
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK 42 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 42 (85)
+. |++++|.|. +.||+.+++.+...|++|+++++++.+
T Consensus 252 La-GKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r 289 (477)
T PLN02494 252 IA-GKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC 289 (477)
T ss_pred cC-CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 45 899999987 599999999999999999999888754
No 391
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=96.48 E-value=0.015 Score=35.64 Aligned_cols=39 Identities=33% Similarity=0.389 Sum_probs=33.8
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG 43 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 43 (85)
++.+++|+|+++++|..+.+.....|++|+++.++++..
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~ 177 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKC 177 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 478999999999999999999999999998888776543
No 392
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.48 E-value=0.024 Score=35.28 Aligned_cols=41 Identities=22% Similarity=0.177 Sum_probs=33.7
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 48 (85)
+.+.|.|+ +.+|..++..|+..|+.|++.+++++..+...+
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 35666665 889999999999999999999999887766544
No 393
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.47 E-value=0.018 Score=36.18 Aligned_cols=37 Identities=27% Similarity=0.222 Sum_probs=33.0
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG 43 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 43 (85)
++.++|.|. +++|+.++..|...|++|.+++|+++..
T Consensus 152 g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~ 188 (296)
T PRK08306 152 GSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL 188 (296)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 889999997 6799999999999999999999987543
No 394
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.47 E-value=0.05 Score=31.58 Aligned_cols=31 Identities=29% Similarity=0.548 Sum_probs=26.0
Q ss_pred EEEecCCChHHHHHHHHHHhCCC-EEEEEecCc
Q 034737 9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLSE 40 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~ 40 (85)
++|.|+ +|+|..+++.|+..|. ++.++|.+.
T Consensus 2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 566765 8999999999999998 488888764
No 395
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.46 E-value=0.02 Score=35.87 Aligned_cols=42 Identities=17% Similarity=0.321 Sum_probs=34.8
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++. ||.++|.|.+.-+|+.++..|.++++.|.++......+.
T Consensus 154 ~l~-Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~ 195 (281)
T PRK14183 154 DVK-GKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLK 195 (281)
T ss_pred CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence 467 999999999999999999999999999987754433333
No 396
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.46 E-value=0.021 Score=35.85 Aligned_cols=43 Identities=16% Similarity=0.380 Sum_probs=35.9
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++......+..
T Consensus 161 ~l~-Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~ 203 (287)
T PRK14176 161 DIE-GKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK 203 (287)
T ss_pred CCC-CCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH
Confidence 456 9999999999999999999999999999888755444433
No 397
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.45 E-value=0.023 Score=35.39 Aligned_cols=40 Identities=30% Similarity=0.346 Sum_probs=33.1
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 48 (85)
.+.|.|+ +-+|..++..|+..|++|++++++++..+...+
T Consensus 5 ~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (291)
T PRK06035 5 VIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAME 44 (291)
T ss_pred EEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 5666665 779999999999999999999999887765444
No 398
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.44 E-value=0.021 Score=35.85 Aligned_cols=42 Identities=21% Similarity=0.271 Sum_probs=35.5
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++......++
T Consensus 152 ~l~-Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~ 193 (287)
T PRK14173 152 PLA-GKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP 193 (287)
T ss_pred CCC-CCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 466 999999999999999999999999999988765544433
No 399
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=96.43 E-value=0.017 Score=38.62 Aligned_cols=39 Identities=26% Similarity=0.369 Sum_probs=33.6
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK 42 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 42 (85)
.+. ||+++|.|.+ .||+.+++++...|++|+++++++..
T Consensus 251 ~La-GKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~ 289 (476)
T PTZ00075 251 MIA-GKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPIC 289 (476)
T ss_pred CcC-CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 356 9999999975 69999999999999999999887654
No 400
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.42 E-value=0.016 Score=34.77 Aligned_cols=68 Identities=19% Similarity=0.006 Sum_probs=43.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhcc----CCCCCCceEEEEecCCCH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH----SNLGFPSAMFIRCDVTNT 76 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~Dv~~~ 76 (85)
+..+++.||+.| .-+..|+.+|++|+.+|.++...+.+..+........+ .......+.++.+|+.+.
T Consensus 35 ~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 106 (213)
T TIGR03840 35 GARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFAL 106 (213)
T ss_pred CCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCC
Confidence 568999999887 45778889999999999999877754332110000000 000123478888888754
No 401
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.42 E-value=0.054 Score=30.13 Aligned_cols=30 Identities=33% Similarity=0.665 Sum_probs=25.4
Q ss_pred EEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737 9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLS 39 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 39 (85)
+++.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus 2 VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 2 VLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred EEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 677776 8999999999999998 68888754
No 402
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.42 E-value=0.02 Score=35.82 Aligned_cols=38 Identities=26% Similarity=0.415 Sum_probs=32.9
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 40 (85)
.+. ||.++|.|.++-.|+.++..|...|+.|.++.+..
T Consensus 156 ~l~-Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t 193 (283)
T PRK14192 156 ELA-GKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT 193 (283)
T ss_pred CCC-CCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 356 89999999977799999999999999988887743
No 403
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=96.42 E-value=0.015 Score=36.77 Aligned_cols=41 Identities=24% Similarity=0.360 Sum_probs=34.4
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV 46 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~ 46 (85)
++.+++|.|+ +++|...+......|++|+++++++++.+.+
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 4789999998 9999999998888999998888877655443
No 404
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.41 E-value=0.022 Score=35.72 Aligned_cols=43 Identities=19% Similarity=0.315 Sum_probs=36.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++......++.
T Consensus 156 ~l~-Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~ 198 (284)
T PRK14177 156 DVT-GKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPS 198 (284)
T ss_pred CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 467 9999999999999999999999999999888755444433
No 405
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.41 E-value=0.025 Score=35.47 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=34.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE 41 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 41 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++.....
T Consensus 155 ~l~-Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~ 193 (284)
T PRK14190 155 DIS-GKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK 193 (284)
T ss_pred CCC-CCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch
Confidence 467 999999999999999999999999999988765443
No 406
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.38 E-value=0.024 Score=35.53 Aligned_cols=43 Identities=21% Similarity=0.219 Sum_probs=36.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++......+..
T Consensus 155 ~l~-Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~ 197 (282)
T PRK14180 155 KTE-GAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS 197 (282)
T ss_pred CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHH
Confidence 466 9999999999999999999999999999888665443433
No 407
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.38 E-value=0.024 Score=35.40 Aligned_cols=43 Identities=19% Similarity=0.329 Sum_probs=36.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++......+..
T Consensus 155 ~l~-Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~ 197 (278)
T PRK14172 155 DIE-GKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKE 197 (278)
T ss_pred CCC-CCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 466 9999999999999999999999999999888755444444
No 408
>PLN00203 glutamyl-tRNA reductase
Probab=96.36 E-value=0.016 Score=39.07 Aligned_cols=46 Identities=26% Similarity=0.328 Sum_probs=38.5
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHHHHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEVAALV 50 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~~~~l 50 (85)
+. ++.++|.|+ |.+|..+++.|...|+ +|+++.|+.++.+.+...+
T Consensus 264 l~-~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 264 HA-SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CC-CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 55 789999988 9999999999999997 6999999987776666543
No 409
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=96.35 E-value=0.019 Score=36.23 Aligned_cols=40 Identities=25% Similarity=0.296 Sum_probs=32.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV 46 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~ 46 (85)
+.+++|.|+ +++|...+..+...|+ +|+++++++++.+.+
T Consensus 170 g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a 210 (343)
T PRK09880 170 GKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA 210 (343)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH
Confidence 778999986 8999999988888898 588888887665543
No 410
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.34 E-value=0.025 Score=35.66 Aligned_cols=43 Identities=23% Similarity=0.336 Sum_probs=35.9
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++......++.
T Consensus 155 ~l~-Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~ 197 (297)
T PRK14186 155 DIA-GKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLAS 197 (297)
T ss_pred CCC-CCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 466 9999999999999999999999999999888654443433
No 411
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=96.33 E-value=0.024 Score=34.42 Aligned_cols=69 Identities=17% Similarity=0.060 Sum_probs=46.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhcc--C--CCCCCceEEEEecCCCHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFH--S--NLGFPSAMFIRCDVTNTK 77 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~--~--~~~~~~~~~~~~Dv~~~~ 77 (85)
+..+++.||+.|. =+..|+.+|++|+.++.++...+...++........+ . ...+..+.++.+|+.+..
T Consensus 44 ~~rvLvPgCGkg~---D~~~LA~~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l~ 116 (226)
T PRK13256 44 SSVCLIPMCGCSI---DMLFFLSKGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNLP 116 (226)
T ss_pred CCeEEEeCCCChH---HHHHHHhCCCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCCC
Confidence 5689999999884 4678899999999999999877776553211100000 0 012234899999998753
No 412
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=96.33 E-value=0.022 Score=35.95 Aligned_cols=40 Identities=18% Similarity=0.122 Sum_probs=32.5
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++.+++|.|+ +++|...+......|++|+.+++++++.+.
T Consensus 165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~ 204 (329)
T TIGR02822 165 PGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRL 204 (329)
T ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 4779999997 899988887777789999888888766443
No 413
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.31 E-value=0.095 Score=31.05 Aligned_cols=33 Identities=21% Similarity=0.419 Sum_probs=26.6
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecC
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLS 39 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~ 39 (85)
+..++|.|+ +|+|..+++.|+..|.. +.++|.+
T Consensus 19 ~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 567888876 56999999999999974 7777654
No 414
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.31 E-value=0.028 Score=37.25 Aligned_cols=46 Identities=37% Similarity=0.398 Sum_probs=34.6
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc-chHHHHHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE-KGNEVAALVEK 52 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~-~~~~~~~~l~~ 52 (85)
++.++|.|+ +++|.++++.|..+|++|.++++++. ......+.+..
T Consensus 16 ~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~ 62 (480)
T PRK01438 16 GLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA 62 (480)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence 778999986 77999999999999999999986553 23333344443
No 415
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=96.30 E-value=0.021 Score=35.49 Aligned_cols=40 Identities=23% Similarity=0.200 Sum_probs=34.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
+.+++|.|+++++|..+++.....|++|+.+++++++.+.
T Consensus 146 ~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~ 185 (329)
T cd05288 146 GETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRW 185 (329)
T ss_pred CCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 6789999999999999999999999999888877654443
No 416
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=96.30 E-value=0.021 Score=36.04 Aligned_cols=44 Identities=27% Similarity=0.426 Sum_probs=35.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecCccchHHHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLSEEKGNEVAALV 50 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~~~~~~~~~~~l 50 (85)
++.++|.|+ |.+|..+++.|...| .+|++++|++++...+.+.+
T Consensus 178 ~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~ 222 (311)
T cd05213 178 GKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL 222 (311)
T ss_pred CCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence 788999987 999999999999866 57888999887666555543
No 417
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.29 E-value=0.028 Score=35.26 Aligned_cols=42 Identities=19% Similarity=0.298 Sum_probs=35.3
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++. ||.++|.|.+.-+|+.++..|.++++.|.++......++
T Consensus 154 ~l~-Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~ 195 (284)
T PRK14170 154 QIE-GKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLP 195 (284)
T ss_pred CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 466 999999999999999999999999999988765444333
No 418
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=96.28 E-value=0.024 Score=35.20 Aligned_cols=40 Identities=23% Similarity=0.220 Sum_probs=33.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
+.+++|.|+++++|..+++.....|++|+++++++++.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 186 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADY 186 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence 5689999999999999999999999999888877655443
No 419
>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB. When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.
Probab=96.27 E-value=0.064 Score=31.81 Aligned_cols=58 Identities=28% Similarity=0.253 Sum_probs=40.0
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCC
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTN 75 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~ 75 (85)
...+|=.||+.| .=+..|+++|+.|..+|.++..++.+.......+.. +.+...|+.+
T Consensus 31 ~g~~LDlgcG~G---RNalyLA~~G~~VtAvD~s~~al~~l~~~a~~~~l~---------i~~~~~Dl~~ 88 (192)
T PF03848_consen 31 PGKALDLGCGEG---RNALYLASQGFDVTAVDISPVALEKLQRLAEEEGLD---------IRTRVADLND 88 (192)
T ss_dssp SSEEEEES-TTS---HHHHHHHHTT-EEEEEESSHHHHHHHHHHHHHTT-T---------EEEEE-BGCC
T ss_pred CCcEEEcCCCCc---HHHHHHHHCCCeEEEEECCHHHHHHHHHHHhhcCce---------eEEEEecchh
Confidence 456777787766 347789999999999999998888876655544443 6667777654
No 420
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.26 E-value=0.031 Score=35.00 Aligned_cols=42 Identities=17% Similarity=0.287 Sum_probs=35.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++......++
T Consensus 153 ~l~-Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~ 194 (282)
T PRK14169 153 DVA-GKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLK 194 (282)
T ss_pred CCC-CCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHH
Confidence 466 999999999999999999999999999988855443333
No 421
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=96.26 E-value=0.024 Score=34.83 Aligned_cols=41 Identities=29% Similarity=0.358 Sum_probs=35.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV 46 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~ 46 (85)
+.+++|.|+++++|..++......|++++.+++++++.+.+
T Consensus 133 ~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 173 (305)
T cd08270 133 GRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL 173 (305)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 77999999999999999999999999999888876655444
No 422
>PRK07411 hypothetical protein; Validated
Probab=96.26 E-value=0.061 Score=35.08 Aligned_cols=62 Identities=21% Similarity=0.316 Sum_probs=43.7
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS 65 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~ 65 (85)
...++|.|+ +|+|..+++.|+..|. +++++|.+ ..+.+.+.+.+.+.++..+
T Consensus 38 ~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~------- 109 (390)
T PRK07411 38 AASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQ------- 109 (390)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCe-------
Confidence 567888877 8999999999999997 57777654 2345566666766665533
Q ss_pred eEEEEecCCC
Q 034737 66 AMFIRCDVTN 75 (85)
Q Consensus 66 ~~~~~~Dv~~ 75 (85)
+..+...++.
T Consensus 110 v~~~~~~~~~ 119 (390)
T PRK07411 110 VDLYETRLSS 119 (390)
T ss_pred EEEEecccCH
Confidence 6666655554
No 423
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=96.25 E-value=0.021 Score=34.16 Aligned_cols=40 Identities=30% Similarity=0.363 Sum_probs=33.4
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++.+++|+|+++ +|..+++.+...|.+|+++++++++.+.
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 173 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL 173 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 377899999988 9999999999999999999887654433
No 424
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.24 E-value=0.03 Score=35.28 Aligned_cols=43 Identities=26% Similarity=0.378 Sum_probs=36.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++......+..
T Consensus 157 ~l~-Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~ 199 (294)
T PRK14187 157 NLS-GSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLAD 199 (294)
T ss_pred CCC-CCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHH
Confidence 467 9999999999999999999999999999888765444433
No 425
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.23 E-value=0.027 Score=35.02 Aligned_cols=41 Identities=24% Similarity=0.375 Sum_probs=34.3
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL 49 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 49 (85)
.+.|.|+ +-+|..++..|+..|++|++.+++++..+...+.
T Consensus 3 ~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~ 43 (288)
T PRK09260 3 KLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQE 43 (288)
T ss_pred EEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence 4667766 8899999999999999999999998877766543
No 426
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=96.23 E-value=0.054 Score=30.38 Aligned_cols=45 Identities=27% Similarity=0.479 Sum_probs=37.7
Q ss_pred EEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEK 52 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~ 52 (85)
.+.|.|+++.+|.+++..|+..+. +++++|++++.++....++..
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~ 48 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSH 48 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhh
Confidence 478999999999999999998864 799999998877776666654
No 427
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.22 E-value=0.027 Score=35.33 Aligned_cols=35 Identities=31% Similarity=0.456 Sum_probs=32.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD 37 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~ 37 (85)
++. ||.+++.|.++-.|+.++..|+++|+.|.++.
T Consensus 155 ~l~-Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~ 189 (284)
T PRK14179 155 ELE-GKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH 189 (284)
T ss_pred CCC-CCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence 466 99999999999999999999999999998873
No 428
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=96.21 E-value=0.031 Score=35.27 Aligned_cols=43 Identities=30% Similarity=0.336 Sum_probs=36.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|-+.-+|+.++..|..+++.|.++......++.
T Consensus 164 ~l~-Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~ 206 (299)
T PLN02516 164 PIK-GKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPES 206 (299)
T ss_pred CCC-CCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 467 9999999999999999999999999999888655444443
No 429
>PRK08328 hypothetical protein; Provisional
Probab=96.20 E-value=0.097 Score=31.75 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=27.7
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS 39 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 39 (85)
+..++|.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus 27 ~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 567888876 8999999999999997 57788754
No 430
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.20 E-value=0.04 Score=34.24 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=33.5
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL 49 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 49 (85)
.+.|.|+ +-+|..++..|+..|++|++.+++++..+...+.
T Consensus 5 kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 5 NVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 4666665 8899999999999999999999998776665544
No 431
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=96.17 E-value=0.023 Score=33.77 Aligned_cols=35 Identities=31% Similarity=0.401 Sum_probs=32.7
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEe
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVD 37 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~ 37 (85)
++. ||.++|.|-+.-+|+.++..|+.+|+.|.+++
T Consensus 59 ~l~-GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~ 93 (197)
T cd01079 59 RLY-GKTITIINRSEVVGRPLAALLANDGARVYSVD 93 (197)
T ss_pred CCC-CCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence 477 99999999999999999999999999999885
No 432
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.17 E-value=0.071 Score=31.58 Aligned_cols=50 Identities=16% Similarity=0.302 Sum_probs=36.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhh
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAK 56 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~ 56 (85)
++.++|.|+ +|+|..+++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++.
T Consensus 21 ~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~ 90 (197)
T cd01492 21 SARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPR 90 (197)
T ss_pred hCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCC
Confidence 567888875 6799999999999997 47777654 12455566666666655
No 433
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=96.17 E-value=0.033 Score=36.59 Aligned_cols=38 Identities=21% Similarity=0.387 Sum_probs=33.2
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK 42 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 42 (85)
+. |++++|.|. |.||+.+++.+...|++|+++++++.+
T Consensus 193 l~-Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r 230 (406)
T TIGR00936 193 IA-GKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIR 230 (406)
T ss_pred CC-cCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhh
Confidence 45 899999986 789999999999999999999888754
No 434
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.15 E-value=0.075 Score=33.79 Aligned_cols=60 Identities=22% Similarity=0.333 Sum_probs=40.7
Q ss_pred EEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCceEE
Q 034737 9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPSAMF 68 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 68 (85)
++|.|+ ||+|-.+++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++..+ +..
T Consensus 2 VlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~-------V~~ 73 (312)
T cd01489 2 VLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVK-------IVA 73 (312)
T ss_pred EEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCe-------EEE
Confidence 577775 9999999999999987 57777653 1345555666665554432 666
Q ss_pred EEecCCCH
Q 034737 69 IRCDVTNT 76 (85)
Q Consensus 69 ~~~Dv~~~ 76 (85)
+..++.+.
T Consensus 74 ~~~~i~~~ 81 (312)
T cd01489 74 YHANIKDP 81 (312)
T ss_pred EeccCCCc
Confidence 66666653
No 435
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=96.15 E-value=0.028 Score=34.43 Aligned_cols=39 Identities=36% Similarity=0.408 Sum_probs=33.5
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG 43 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 43 (85)
++..++|+|+++++|..++..+...|+.|+.++++.+..
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~ 177 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKL 177 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHH
Confidence 367899999999999999999999999998888776443
No 436
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.15 E-value=0.037 Score=34.66 Aligned_cols=43 Identities=23% Similarity=0.414 Sum_probs=36.0
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|-+.-+|+.++..|..+++.|.++......++.
T Consensus 154 ~l~-Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~ 196 (282)
T PRK14166 154 DLE-GKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSL 196 (282)
T ss_pred CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 466 9999999999999999999999999999888665444433
No 437
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=96.14 E-value=0.037 Score=34.81 Aligned_cols=44 Identities=23% Similarity=0.431 Sum_probs=36.8
Q ss_pred EEEEecCCChHHHHHHHHHHhCC--CEEEEEecCccchHHHHHHHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKG--VFVTVVDLSEEKGNEVAALVEK 52 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g--~~v~~~~~~~~~~~~~~~~l~~ 52 (85)
.+.|.|+ +++|..++..|+..| ..++++++++++.+....++..
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~ 47 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLED 47 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHH
Confidence 4677775 899999999999998 5799999999888877777754
No 438
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=96.14 E-value=0.029 Score=35.11 Aligned_cols=47 Identities=21% Similarity=0.325 Sum_probs=35.4
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCc---cchHHHHHHHHHHhhh
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSE---EKGNEVAALVEKENAK 56 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~---~~~~~~~~~l~~~~~~ 56 (85)
++|||++|-+|..+++.|. .+.+|+.+++.. .......+.+.+..+.
T Consensus 3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~~Ditd~~~v~~~i~~~~PD 52 (281)
T COG1091 3 ILITGANGQLGTELRRALP-GEFEVIATDRAELDITDPDAVLEVIRETRPD 52 (281)
T ss_pred EEEEcCCChHHHHHHHHhC-CCceEEeccCccccccChHHHHHHHHhhCCC
Confidence 8999999999999999999 678898887754 2344455555555444
No 439
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=96.13 E-value=0.029 Score=33.72 Aligned_cols=68 Identities=21% Similarity=0.005 Sum_probs=43.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccC----CCCCCceEEEEecCCCH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHS----NLGFPSAMFIRCDVTNT 76 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~Dv~~~ 76 (85)
+..+++.||+.| .-+..|+.+|++|+.++.++...+.+..+.......... .....++.++.+|+.+.
T Consensus 38 ~~rvL~~gCG~G---~da~~LA~~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l 109 (218)
T PRK13255 38 GSRVLVPLCGKS---LDMLWLAEQGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL 109 (218)
T ss_pred CCeEEEeCCCCh---HhHHHHHhCCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence 568999999877 557778899999999999998777653211100000000 00123478888888754
No 440
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.12 E-value=0.025 Score=35.16 Aligned_cols=65 Identities=22% Similarity=0.214 Sum_probs=38.5
Q ss_pred CCCCCcEEEEecCCC-hHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCCCH
Q 034737 2 ELKPGLSAFVTGGAS-GIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVTNT 76 (85)
Q Consensus 2 ~l~~~~~~litG~~~-gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~~~ 76 (85)
.+.+|.++|=.||+- ++...++++. |++|+.++.++++.+.+.+.+.+.+.. .++.+...|..+.
T Consensus 59 ~l~~G~~vLDiGcGwG~~~~~~a~~~---g~~v~gitlS~~Q~~~a~~~~~~~gl~-------~~v~v~~~D~~~~ 124 (273)
T PF02353_consen 59 GLKPGDRVLDIGCGWGGLAIYAAERY---GCHVTGITLSEEQAEYARERIREAGLE-------DRVEVRLQDYRDL 124 (273)
T ss_dssp T--TT-EEEEES-TTSHHHHHHHHHH-----EEEEEES-HHHHHHHHHHHHCSTSS-------STEEEEES-GGG-
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHHc---CcEEEEEECCHHHHHHHHHHHHhcCCC-------CceEEEEeecccc
Confidence 355688999999774 4444444443 899999999998888888877765532 1266777776653
No 441
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=96.11 E-value=0.03 Score=34.81 Aligned_cols=40 Identities=28% Similarity=0.266 Sum_probs=33.6
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++..++|.|+++++|..+++.....|..|+.+++++++.+
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 4778999999999999999988889999988887665433
No 442
>COG5322 Predicted dehydrogenase [General function prediction only]
Probab=96.10 E-value=0.017 Score=36.22 Aligned_cols=45 Identities=18% Similarity=0.109 Sum_probs=37.9
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALV 50 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l 50 (85)
..++-|.|+++.|+..+++.|..++..+.++.|+.+..++....+
T Consensus 167 qatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~l~~ 211 (351)
T COG5322 167 QATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQRLTL 211 (351)
T ss_pred HCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhhhhh
Confidence 568999999999999999999999999999998876655544443
No 443
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=96.09 E-value=0.034 Score=34.39 Aligned_cols=40 Identities=28% Similarity=0.302 Sum_probs=34.1
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++..++|+|+++++|..+++.....|++|+.+++++++.+
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~ 181 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA 181 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3678999999999999999999999999988887765443
No 444
>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]
Probab=96.08 E-value=0.041 Score=37.05 Aligned_cols=70 Identities=26% Similarity=0.345 Sum_probs=47.0
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS 65 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~ 65 (85)
+..+|+.|+ ||||-.+.+-|+..|. .|.++|.+ ++++..+.+....-+++. +
T Consensus 12 ~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNRQFLFrkkhVgqsKA~vA~~~v~~Fnpn~-------~ 83 (603)
T KOG2013|consen 12 SGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNRQFLFRKKHVGQSKATVAAKAVKQFNPNI-------K 83 (603)
T ss_pred cCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhhhheeehhhcCchHHHHHHHHHHHhCCCC-------c
Confidence 456788876 8999999999999987 46677653 123333333333333333 3
Q ss_pred eEEEEecCCCHHH-HHHhh
Q 034737 66 AMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 66 ~~~~~~Dv~~~~~-~~~~~ 83 (85)
+.++..++.+++. ..+|.
T Consensus 84 l~~yhanI~e~~fnv~ff~ 102 (603)
T KOG2013|consen 84 LVPYHANIKEPKFNVEFFR 102 (603)
T ss_pred eEeccccccCcchHHHHHH
Confidence 8999999999876 66665
No 445
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.07 E-value=0.054 Score=33.94 Aligned_cols=41 Identities=20% Similarity=0.360 Sum_probs=33.4
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAAL 49 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 49 (85)
.+.|.|+ +.+|..++..|+..|+.|++++++++..+...+.
T Consensus 6 ~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 6 NLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 4555655 7899999999999999999999998777666553
No 446
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.07 E-value=0.032 Score=34.55 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=34.0
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++.+++|.|+++++|..+++.....|++++++.++.++.+.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~ 179 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAE 179 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence 47789999999999999999999999999888776554333
No 447
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.05 E-value=0.12 Score=31.58 Aligned_cols=30 Identities=37% Similarity=0.554 Sum_probs=24.0
Q ss_pred EEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737 9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLS 39 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 39 (85)
+++.| .||+|-.+++.|+..|. ++.++|.+
T Consensus 2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D 32 (234)
T cd01484 2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMD 32 (234)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56665 58999999999999987 57777664
No 448
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.05 E-value=0.045 Score=34.31 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=35.4
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++. ||.++|.|.+.-+|+.++..|.++++.|.++......++
T Consensus 154 ~l~-Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~ 195 (282)
T PRK14182 154 DPK-GKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLA 195 (282)
T ss_pred CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 466 999999999999999999999999999988765544443
No 449
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.03 E-value=0.049 Score=34.13 Aligned_cols=46 Identities=24% Similarity=0.322 Sum_probs=35.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCcc---chHHHHHHH
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEE---KGNEVAALV 50 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~---~~~~~~~~l 50 (85)
+. ++.++|.|+ +|-+++++-.|...|+ +|.++.|+++ +++.+.+.+
T Consensus 122 ~~-~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~ 171 (288)
T PRK12749 122 IK-GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV 171 (288)
T ss_pred cC-CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence 34 788999987 6669999999999886 6889999854 556655544
No 450
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.02 E-value=0.043 Score=34.48 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=35.0
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++. ||.++|.|.+.-+|+.++..|..+++.|.++......+.
T Consensus 156 ~l~-GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~ 197 (288)
T PRK14171 156 NLT-GKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLS 197 (288)
T ss_pred CCC-CCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 466 999999999999999999999999999987764443333
No 451
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=96.02 E-value=0.029 Score=35.31 Aligned_cols=38 Identities=24% Similarity=0.196 Sum_probs=32.1
Q ss_pred CCCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737 1 MELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40 (85)
Q Consensus 1 ~~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 40 (85)
|++. .+.+.|.|+ |.||..++..|.+.|++|.++.|+.
T Consensus 1 ~~~~-~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 1 MDSE-TPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred CCCc-CcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 5666 567777754 9999999999999999999999975
No 452
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.02 E-value=0.038 Score=33.99 Aligned_cols=39 Identities=31% Similarity=0.417 Sum_probs=33.5
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG 43 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 43 (85)
++.+++|.|+++++|..+++.....|++|+.+.+++++.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~ 180 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA 180 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 367999999999999999999999999998887776543
No 453
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.99 E-value=0.087 Score=32.07 Aligned_cols=35 Identities=34% Similarity=0.478 Sum_probs=28.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS 39 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 39 (85)
|. +..++|.|+ +|+|..+++.|++.|. +++++|.+
T Consensus 9 L~-~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 9 LR-NAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred Hh-CCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 44 667888877 8999999999999997 67787754
No 454
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=95.98 E-value=0.038 Score=35.55 Aligned_cols=42 Identities=26% Similarity=0.324 Sum_probs=34.6
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV 46 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~ 46 (85)
++.+++|+|+++++|..++......|++++++++++++.+.+
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~ 234 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC 234 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 367999999999999999988888999988888776554433
No 455
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=95.98 E-value=0.12 Score=33.82 Aligned_cols=33 Identities=30% Similarity=0.532 Sum_probs=27.3
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS 39 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~ 39 (85)
+..++|.|+ +|+|..+++.|+..|. ++.++|.+
T Consensus 42 ~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 42 NARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred cCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence 567888877 8999999999999987 57777654
No 456
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=95.97 E-value=0.037 Score=35.74 Aligned_cols=40 Identities=28% Similarity=0.320 Sum_probs=33.3
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++.+++|.|+++++|..++..+...|+++++++++.++.+
T Consensus 189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~ 228 (398)
T TIGR01751 189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE 228 (398)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 3679999999999999999988899999888877665433
No 457
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=95.95 E-value=0.052 Score=39.56 Aligned_cols=64 Identities=17% Similarity=0.174 Sum_probs=47.4
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCC-CE-------------EEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEe
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKG-VF-------------VTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRC 71 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g-~~-------------v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 71 (85)
.|.++|.|+ |.+|+..++.|++.. +. |.+.+++.+.++.+.+.+ ++ +.++..
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~---------~~~v~l 634 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----EN---------AEAVQL 634 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CC---------CceEEe
Confidence 457888886 999999999998753 23 777888876666555432 23 678999
Q ss_pred cCCCHHH-HHHhh
Q 034737 72 DVTNTKF-ALAFL 83 (85)
Q Consensus 72 Dv~~~~~-~~~~~ 83 (85)
|++|.++ .++++
T Consensus 635 Dv~D~e~L~~~v~ 647 (1042)
T PLN02819 635 DVSDSESLLKYVS 647 (1042)
T ss_pred ecCCHHHHHHhhc
Confidence 9999988 77644
No 458
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=95.93 E-value=0.032 Score=35.01 Aligned_cols=40 Identities=23% Similarity=0.160 Sum_probs=32.5
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccchHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKGNE 45 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~~~ 45 (85)
++.+++|+|+ +++|..+++.+...|++ |+++++++++.+.
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~ 203 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL 203 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 3778999975 89999999988889998 8888887665443
No 459
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.92 E-value=0.14 Score=29.23 Aligned_cols=40 Identities=35% Similarity=0.340 Sum_probs=31.8
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 48 (85)
.+-+.|. +-+|..++++|.+.|++|.+.+|++++.+++.+
T Consensus 3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~ 42 (163)
T PF03446_consen 3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE 42 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH
Confidence 3455555 789999999999999999999999877766654
No 460
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.92 E-value=0.074 Score=33.73 Aligned_cols=47 Identities=19% Similarity=0.381 Sum_probs=39.6
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCccchHHHHHHHHHH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSEEKGNEVAALVEKE 53 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~~~~~~~~~~l~~~ 53 (85)
++.+.|.|+ +.+|..++..++..+. .+.++|++++.++....++...
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~ 54 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHA 54 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhh
Confidence 678999997 9999999999998886 7999999988877777776643
No 461
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.92 E-value=0.14 Score=31.93 Aligned_cols=35 Identities=29% Similarity=0.397 Sum_probs=28.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCC-CEEEEEecC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKG-VFVTVVDLS 39 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g-~~v~~~~~~ 39 (85)
|. +..++|.|+ +|+|..+++.|++.| -++.++|.+
T Consensus 28 L~-~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 28 FA-DAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred hc-CCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 44 667888876 899999999999999 478888764
No 462
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.91 E-value=0.11 Score=32.00 Aligned_cols=53 Identities=21% Similarity=0.453 Sum_probs=40.0
Q ss_pred CCCCCcEEEEec-CCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhh
Q 034737 2 ELKPGLSAFVTG-GASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENA 55 (85)
Q Consensus 2 ~l~~~~~~litG-~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~ 55 (85)
++.||.+++=.| |+|++-.++++.+...| +|+-....++.++.+.+++...+.
T Consensus 37 ~i~pG~~VlEaGtGSG~lt~~l~r~v~p~G-~v~t~E~~~~~~~~A~~n~~~~gl 90 (247)
T PF08704_consen 37 DIRPGSRVLEAGTGSGSLTHALARAVGPTG-HVYTYEFREDRAEKARKNFERHGL 90 (247)
T ss_dssp T--TT-EEEEE--TTSHHHHHHHHHHTTTS-EEEEEESSHHHHHHHHHHHHHTTC
T ss_pred CCCCCCEEEEecCCcHHHHHHHHHHhCCCe-EEEccccCHHHHHHHHHHHHHcCC
Confidence 455788999999 55678888888888777 899999999999999998887544
No 463
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.91 E-value=0.032 Score=35.59 Aligned_cols=37 Identities=19% Similarity=0.230 Sum_probs=32.9
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE 41 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 41 (85)
+. ||++.|.|. |.||+.+++.+...|++|+..++...
T Consensus 148 L~-gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 148 VY-GKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred CC-CCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 56 899999987 99999999999999999999888653
No 464
>PRK14851 hypothetical protein; Provisional
Probab=95.91 E-value=0.13 Score=36.06 Aligned_cols=70 Identities=11% Similarity=0.140 Sum_probs=45.9
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLG 62 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 62 (85)
|. +..++|.|+ +|+|..+++.|+..|. +++++|.+ ..+.+.+.+.+.+.++..+
T Consensus 41 L~-~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~---- 114 (679)
T PRK14851 41 LA-EAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLE---- 114 (679)
T ss_pred Hh-cCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCe----
Confidence 44 678899985 8999999999999997 56777653 1244445555555544432
Q ss_pred CCceEEEEecCCCHHH-HHHh
Q 034737 63 FPSAMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 63 ~~~~~~~~~Dv~~~~~-~~~~ 82 (85)
+..+...++ .+. .+++
T Consensus 115 ---I~~~~~~i~-~~n~~~~l 131 (679)
T PRK14851 115 ---ITPFPAGIN-ADNMDAFL 131 (679)
T ss_pred ---EEEEecCCC-hHHHHHHH
Confidence 667776775 333 4444
No 465
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.89 E-value=0.086 Score=33.84 Aligned_cols=46 Identities=24% Similarity=0.257 Sum_probs=36.6
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVE 51 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~ 51 (85)
||+++-|+|..+ +|.--++.-..-|++|++++++..+.+++.+.|-
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG 226 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG 226 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC
Confidence 689999999866 8876666555679999999999877777776664
No 466
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=95.87 E-value=0.078 Score=33.05 Aligned_cols=40 Identities=18% Similarity=0.139 Sum_probs=32.6
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA 47 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~ 47 (85)
+.+.|.|+ +-+|..++..|+..|+.|++.+++++..+...
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~ 44 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSRGL 44 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHH
Confidence 45666665 88999999999999999999999987765433
No 467
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=95.87 E-value=0.047 Score=34.08 Aligned_cols=42 Identities=31% Similarity=0.358 Sum_probs=35.6
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV 46 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~ 46 (85)
++.+++|.|+++.+|..+++.....|.+++.+++++++.+.+
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~ 203 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV 203 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 367899999999999999999999999998888877655443
No 468
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.86 E-value=0.13 Score=32.84 Aligned_cols=38 Identities=29% Similarity=0.389 Sum_probs=32.6
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccc
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEK 42 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~ 42 (85)
+. ++++.|.|. |.||+++++.|...|++|++.++++..
T Consensus 144 l~-g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 144 VK-NMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred cC-CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 45 788888876 789999999999999999999987643
No 469
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=95.84 E-value=0.046 Score=34.66 Aligned_cols=34 Identities=29% Similarity=0.280 Sum_probs=29.1
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS 39 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 39 (85)
++.+++|.|+ +++|...+..+...|++|++++++
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence 3778999985 999999998888889999999873
No 470
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=95.84 E-value=0.048 Score=33.28 Aligned_cols=40 Identities=33% Similarity=0.366 Sum_probs=33.7
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++..++|.|+++++|..+++.....|+.|+.+++++++.+
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 175 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE 175 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 3778999999999999999999999999988877665433
No 471
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=95.82 E-value=0.042 Score=33.81 Aligned_cols=37 Identities=27% Similarity=0.365 Sum_probs=29.7
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCE-EEEEecCccch
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVF-VTVVDLSEEKG 43 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~-v~~~~~~~~~~ 43 (85)
+.+++|.|+ +++|...++.....|++ |+++++++++.
T Consensus 121 g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 121 GRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 678899976 89999998888888986 77777766544
No 472
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=95.81 E-value=0.049 Score=33.78 Aligned_cols=40 Identities=33% Similarity=0.424 Sum_probs=33.4
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++..++|.|+++++|..+++.....|+.++++.+++++.+
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 179 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVD 179 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 3678999999999999999999999999877777665433
No 473
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.80 E-value=0.066 Score=33.61 Aligned_cols=42 Identities=26% Similarity=0.370 Sum_probs=34.7
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHh--CCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAG--KGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~--~g~~v~~~~~~~~~~~ 44 (85)
++. ||.++|.|.+.-+|+.++..|.+ +++.|.++......++
T Consensus 155 ~l~-Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~ 198 (284)
T PRK14193 155 ELA-GAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLA 198 (284)
T ss_pred CCC-CCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHH
Confidence 466 99999999999999999999998 7888888765544333
No 474
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=95.79 E-value=0.057 Score=33.49 Aligned_cols=39 Identities=28% Similarity=0.304 Sum_probs=33.1
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
+.+++|.|+++++|..+++.....|+++++++.++++.+
T Consensus 147 ~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~ 185 (324)
T cd08288 147 DGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEAD 185 (324)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 568999999999999999998899999988877665443
No 475
>PLN02928 oxidoreductase family protein
Probab=95.77 E-value=0.037 Score=35.54 Aligned_cols=36 Identities=31% Similarity=0.288 Sum_probs=32.2
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 40 (85)
+. ||++.|.|. |.||+.+++.+...|++|+..+++.
T Consensus 157 l~-gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~ 192 (347)
T PLN02928 157 LF-GKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW 192 (347)
T ss_pred CC-CCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence 56 899999977 8999999999999999999998763
No 476
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=95.77 E-value=0.14 Score=30.68 Aligned_cols=65 Identities=23% Similarity=0.224 Sum_probs=47.6
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHHHHHHHhhhccCCCCCCceEEEEecCC
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAALVEKENAKFHSNLGFPSAMFIRCDVT 74 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Dv~ 74 (85)
++.++..++-.|+++|...++.-+|......|+.+.+++.-.+.+.+.+...+.. + +.++..|-.
T Consensus 69 ~l~pg~~VLeIGtGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~-n-------v~~~~gdg~ 133 (209)
T PF01135_consen 69 DLKPGDRVLEIGTGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGID-N-------VEVVVGDGS 133 (209)
T ss_dssp TC-TT-EEEEES-TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTH-S-------EEEEES-GG
T ss_pred hcCCCCEEEEecCCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccC-c-------eeEEEcchh
Confidence 3456889999999999999999999977668999999998777777777765443 1 666766654
No 477
>PRK07877 hypothetical protein; Provisional
Probab=95.76 E-value=0.1 Score=36.69 Aligned_cols=70 Identities=20% Similarity=0.196 Sum_probs=47.8
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCC--EEEEEecCc------------------cchHHHHHHHHHHhhhccCCCC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGV--FVTVVDLSE------------------EKGNEVAALVEKENAKFHSNLG 62 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~--~v~~~~~~~------------------~~~~~~~~~l~~~~~~~~~~~~ 62 (85)
|. +..++|.|+ + +|..++..|+..|. +++++|.+. .+.+.+.+.+.+.++..+
T Consensus 105 L~-~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~---- 177 (722)
T PRK07877 105 LG-RLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLP---- 177 (722)
T ss_pred Hh-cCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCE----
Confidence 44 678999999 4 99999999999984 788887642 244445555555554433
Q ss_pred CCceEEEEecCCCHHH-HHHhh
Q 034737 63 FPSAMFIRCDVTNTKF-ALAFL 83 (85)
Q Consensus 63 ~~~~~~~~~Dv~~~~~-~~~~~ 83 (85)
+..+...++ .+. .+++.
T Consensus 178 ---v~~~~~~i~-~~n~~~~l~ 195 (722)
T PRK07877 178 ---VEVFTDGLT-EDNVDAFLD 195 (722)
T ss_pred ---EEEEeccCC-HHHHHHHhc
Confidence 777777776 455 55543
No 478
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=95.75 E-value=0.051 Score=33.93 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=31.5
Q ss_pred CcEEEEecCCChHHHHHHHHHHhC-CCEEEEEecCccchH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGK-GVFVTVVDLSEEKGN 44 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~~~~~~~ 44 (85)
+.+++|.|+++++|..+++..... |++|+.+.+++++.+
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~ 188 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQE 188 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHH
Confidence 679999999999999988777666 999988877665433
No 479
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.74 E-value=0.09 Score=33.35 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=31.7
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCcc
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEE 41 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~ 41 (85)
+. ++++.|.|. |.||+.+++.|...|++|+..++..+
T Consensus 134 l~-g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~ 170 (312)
T PRK15469 134 RE-DFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK 170 (312)
T ss_pred cC-CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 45 888888866 88999999999999999999887543
No 480
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.74 E-value=0.05 Score=30.92 Aligned_cols=38 Identities=34% Similarity=0.355 Sum_probs=30.1
Q ss_pred EEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737 9 AFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA 47 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~ 47 (85)
+.|.|+ |.+|.+++..|..+|.+|.+..|+++..+.+.
T Consensus 2 I~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~ 39 (157)
T PF01210_consen 2 IAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEIN 39 (157)
T ss_dssp EEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHH
T ss_pred EEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence 345544 78899999999999999999999985554443
No 481
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=95.73 E-value=0.059 Score=33.83 Aligned_cols=41 Identities=22% Similarity=0.287 Sum_probs=33.7
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEV 46 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~ 46 (85)
++.+++|.| ++++|..++......|++|+.+++++++.+.+
T Consensus 163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~ 203 (333)
T cd08296 163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA 203 (333)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence 367899999 79999999998889999999888876554443
No 482
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=95.72 E-value=0.061 Score=33.30 Aligned_cols=39 Identities=28% Similarity=0.362 Sum_probs=32.8
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
+..++|.|+++++|..++......|++|+++++++++.+
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 185 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQAD 185 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 358999999999999999888889999988888765443
No 483
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.71 E-value=0.061 Score=34.85 Aligned_cols=43 Identities=28% Similarity=0.386 Sum_probs=36.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. ||.++|.|-+.-+|+.++..|.++++.|.++......++.
T Consensus 228 ~l~-GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~ 270 (364)
T PLN02616 228 EIK-GKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEE 270 (364)
T ss_pred CCC-CCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHH
Confidence 466 9999999999999999999999999999888655444443
No 484
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.71 E-value=0.052 Score=30.29 Aligned_cols=34 Identities=29% Similarity=0.358 Sum_probs=28.5
Q ss_pred EEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 10 FVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 10 litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
+|.|+ +.||..++-+|.+.|++|.+++|.+ .++.
T Consensus 2 ~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~ 35 (151)
T PF02558_consen 2 LIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEA 35 (151)
T ss_dssp EEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHH
T ss_pred EEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHh
Confidence 45544 8899999999999999999999988 5555
No 485
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=95.71 E-value=0.058 Score=33.37 Aligned_cols=39 Identities=23% Similarity=0.161 Sum_probs=33.3
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccch
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKG 43 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~ 43 (85)
++.+++|.|+++++|..+++.....|++++++.+++++.
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~ 176 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQV 176 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHH
Confidence 367899999999999999999999999998887766543
No 486
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.67 E-value=0.079 Score=33.33 Aligned_cols=42 Identities=26% Similarity=0.301 Sum_probs=35.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHh----CCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAG----KGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~----~g~~v~~~~~~~~~~~ 44 (85)
++. ||.++|.|.+.-+|+.++..|.. +++.|.++......+.
T Consensus 154 ~l~-Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~ 199 (286)
T PRK14184 154 SPA-GKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLA 199 (286)
T ss_pred CCC-CCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHH
Confidence 466 99999999999999999999998 8899988876554333
No 487
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=95.66 E-value=0.074 Score=27.16 Aligned_cols=34 Identities=32% Similarity=0.517 Sum_probs=29.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhC-CCEEEEEec
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGK-GVFVTVVDL 38 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~-g~~v~~~~~ 38 (85)
+. ++++++.|+ +..|+.++..|... +.++.+.+|
T Consensus 21 ~~-~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LK-GKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CC-CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 45 789999999 99999999999998 567777777
No 488
>PRK14852 hypothetical protein; Provisional
Probab=95.64 E-value=0.14 Score=37.23 Aligned_cols=68 Identities=15% Similarity=0.137 Sum_probs=45.2
Q ss_pred CcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCc
Q 034737 6 GLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPS 65 (85)
Q Consensus 6 ~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~ 65 (85)
+..++|.|+ +|+|..+++.|+..|. ++.++|.+ ..+.+.+.+.+.+.++..+
T Consensus 332 ~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~------- 403 (989)
T PRK14852 332 RSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLD------- 403 (989)
T ss_pred cCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCe-------
Confidence 667888875 8999999999999987 56666553 2345556666666655533
Q ss_pred eEEEEecCCCHHH-HHHh
Q 034737 66 AMFIRCDVTNTKF-ALAF 82 (85)
Q Consensus 66 ~~~~~~Dv~~~~~-~~~~ 82 (85)
+..+...++ .+. .+++
T Consensus 404 I~~~~~~I~-~en~~~fl 420 (989)
T PRK14852 404 IRSFPEGVA-AETIDAFL 420 (989)
T ss_pred EEEEecCCC-HHHHHHHh
Confidence 666655553 334 4444
No 489
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.63 E-value=0.091 Score=33.52 Aligned_cols=41 Identities=17% Similarity=0.113 Sum_probs=32.6
Q ss_pred cEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHHH
Q 034737 7 LSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVAA 48 (85)
Q Consensus 7 ~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~~ 48 (85)
+.+.|.|+ |-+|..++..|+..|+.|++.+++++..+....
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~ 48 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRA 48 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 45556654 789999999999999999999999876555443
No 490
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.61 E-value=0.071 Score=34.35 Aligned_cols=42 Identities=26% Similarity=0.338 Sum_probs=35.4
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGN 44 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~ 44 (85)
++. ||.++|.|-+.-+|+.++..|.++++.|.++......++
T Consensus 211 ~l~-GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~ 252 (345)
T PLN02897 211 EIA-GKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPE 252 (345)
T ss_pred CCC-CCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHH
Confidence 466 999999999999999999999999999988865444343
No 491
>PLN02740 Alcohol dehydrogenase-like
Probab=95.61 E-value=0.057 Score=34.70 Aligned_cols=41 Identities=24% Similarity=0.286 Sum_probs=33.1
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNEV 46 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~~ 46 (85)
++.+++|.|+ +++|...+......|+ +|+.+++++++.+.+
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a 239 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG 239 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence 4778999985 8999999998888998 588888877655544
No 492
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=95.60 E-value=0.065 Score=33.22 Aligned_cols=39 Identities=26% Similarity=0.270 Sum_probs=31.7
Q ss_pred EEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHHHH
Q 034737 8 SAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNEVA 47 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~~~ 47 (85)
.+.|.|+ |.+|..++..|.+.|++|.+++|+.+..+...
T Consensus 2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~ 40 (304)
T PRK06522 2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALN 40 (304)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHH
Confidence 3677776 89999999999999999999999766555443
No 493
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=95.58 E-value=0.061 Score=33.06 Aligned_cols=44 Identities=30% Similarity=0.407 Sum_probs=36.3
Q ss_pred EEEecCCChHHHHHHHHHHhCC----CEEEEEecCccchHHHHHHHHH
Q 034737 9 AFVTGGASGIGRALSLALAGKG----VFVTVVDLSEEKGNEVAALVEK 52 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g----~~v~~~~~~~~~~~~~~~~l~~ 52 (85)
+.|.|+++.+|..++..|+..+ ..++++|.++++++....++..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~ 48 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQD 48 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHH
Confidence 3578887889999999999988 6899999998877777666653
No 494
>PRK06487 glycerate dehydrogenase; Provisional
Probab=95.57 E-value=0.07 Score=33.85 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=31.3
Q ss_pred CCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecC
Q 034737 3 LKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLS 39 (85)
Q Consensus 3 l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~ 39 (85)
+. ||++.|.|. |.||+.+++++...|++|+..++.
T Consensus 146 l~-gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 146 LE-GKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred cC-CCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence 56 889999977 899999999999999999988875
No 495
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=95.57 E-value=0.053 Score=35.26 Aligned_cols=44 Identities=20% Similarity=0.288 Sum_probs=33.7
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCC---EEEEEecCccchHHHHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGV---FVTVVDLSEEKGNEVAA 48 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~---~v~~~~~~~~~~~~~~~ 48 (85)
++.+++|.|+++++|...+......|. +|+++++++++.+.+.+
T Consensus 175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~ 221 (410)
T cd08238 175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQR 221 (410)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHH
Confidence 367899999999999998877666543 78888888776655443
No 496
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=95.57 E-value=0.065 Score=33.59 Aligned_cols=43 Identities=26% Similarity=0.371 Sum_probs=36.1
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCccchHH
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSEEKGNE 45 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~~~~~~ 45 (85)
++. |+.++|.|.+.=.|+.++..|+..++.|.++......+..
T Consensus 153 ~l~-Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~ 195 (283)
T COG0190 153 DLR-GKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLAS 195 (283)
T ss_pred CCC-CCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHH
Confidence 456 9999999999999999999999999999888665543333
No 497
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.56 E-value=0.046 Score=34.83 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=28.6
Q ss_pred EEEEecCCChHHHHHHHHHHhCC-------CEEEEEecCc
Q 034737 8 SAFVTGGASGIGRALSLALAGKG-------VFVTVVDLSE 40 (85)
Q Consensus 8 ~~litG~~~gig~~~~~~l~~~g-------~~v~~~~~~~ 40 (85)
.++|||++|.+|.+++..|+..+ ..++++|+++
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~ 43 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP 43 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence 58999999999999999999854 4799999855
No 498
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=95.55 E-value=0.067 Score=34.25 Aligned_cols=40 Identities=20% Similarity=0.169 Sum_probs=31.9
Q ss_pred CCcEEEEecCCChHHHHHHHHHHhCCC-EEEEEecCccchHH
Q 034737 5 PGLSAFVTGGASGIGRALSLALAGKGV-FVTVVDLSEEKGNE 45 (85)
Q Consensus 5 ~~~~~litG~~~gig~~~~~~l~~~g~-~v~~~~~~~~~~~~ 45 (85)
++.+++|.|+ +++|...+......|+ +|+++++++++.+.
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~ 225 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFEL 225 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 4778999975 8999999888888898 78888887655443
No 499
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=95.54 E-value=0.17 Score=31.97 Aligned_cols=59 Identities=24% Similarity=0.311 Sum_probs=39.1
Q ss_pred EEEecCCChHHHHHHHHHHhCCC-EEEEEecC-------------------ccchHHHHHHHHHHhhhccCCCCCCceEE
Q 034737 9 AFVTGGASGIGRALSLALAGKGV-FVTVVDLS-------------------EEKGNEVAALVEKENAKFHSNLGFPSAMF 68 (85)
Q Consensus 9 ~litG~~~gig~~~~~~l~~~g~-~v~~~~~~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 68 (85)
++|.| .||+|-.+++.|+..|. ++.++|.+ ..+++.+.+.+.+.++..+ +..
T Consensus 2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~-------I~~ 73 (291)
T cd01488 2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVN-------VTP 73 (291)
T ss_pred EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCE-------EEE
Confidence 56666 48999999999999987 57777653 1345555556665555432 566
Q ss_pred EEecCCC
Q 034737 69 IRCDVTN 75 (85)
Q Consensus 69 ~~~Dv~~ 75 (85)
+..++.+
T Consensus 74 ~~~~i~~ 80 (291)
T cd01488 74 HFGKIQD 80 (291)
T ss_pred EecccCc
Confidence 6666654
No 500
>PLN03139 formate dehydrogenase; Provisional
Probab=95.52 E-value=0.19 Score=32.89 Aligned_cols=37 Identities=24% Similarity=0.219 Sum_probs=32.2
Q ss_pred CCCCCcEEEEecCCChHHHHHHHHHHhCCCEEEEEecCc
Q 034737 2 ELKPGLSAFVTGGASGIGRALSLALAGKGVFVTVVDLSE 40 (85)
Q Consensus 2 ~l~~~~~~litG~~~gig~~~~~~l~~~g~~v~~~~~~~ 40 (85)
++. ||++-|.|. |.||+.+++.|...|++|+..++..
T Consensus 196 ~L~-gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~ 232 (386)
T PLN03139 196 DLE-GKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK 232 (386)
T ss_pred CCC-CCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence 366 899999985 7899999999999999999888764
Done!