Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>034746
MGGADHGHAGEGAHRDFRAKVWSMPGGPNCRPKHWKRNTAIAMAGIFLICIPIAMKSAEL
EQRPHHPVRPIPSQLWCKNFGTKDY

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034746
        (85 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006419 - symbol:AT4G00585 "AT4G00585" speci...   344  2.6e-31   1


>TAIR|locus:505006419 [details] [associations]
            symbol:AT4G00585 "AT4G00585" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009853
            "photorespiration" evidence=RCA;TAS] [GO:0031966 "mitochondrial
            membrane" evidence=IDA] [GO:0045271 "respiratory chain complex I"
            evidence=IDA] [GO:0005747 "mitochondrial respiratory chain complex
            I" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=RCA] [GO:0051788 "response to misfolded protein"
            evidence=RCA] [GO:0080129 "proteasome core complex assembly"
            evidence=RCA] EMBL:CP002687 GO:GO:0005747 GO:GO:0009853
            UniGene:At.44857 EMBL:AY063842 EMBL:AY091239 EMBL:AK118700
            IPI:IPI00534030 RefSeq:NP_567180.1 UniGene:At.48813 IntAct:Q8VZT9
            STRING:Q8VZT9 PRIDE:Q8VZT9 EnsemblPlants:AT4G00585.1 GeneID:828026
            KEGG:ath:AT4G00585 TAIR:At4g00585 InParanoid:Q8VZT9 OMA:WCKNFGK
            PhylomeDB:Q8VZT9 ProtClustDB:CLSN2689258 ArrayExpress:Q8VZT9
            Genevestigator:Q8VZT9 Uniprot:Q8VZT9
        Length = 88

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 59/69 (85%), Positives = 64/69 (92%)

Query:    16 DFRAKVWSMPGGPNCRPKHWKRNTAIAMAGIFLICIPIAMKSAELEQRPHHPVRPIPSQL 75
             DFRAKVWSM GGPNCRPKHW+RNTAIAM G+FL+CIPIA  SA+LEQRPH PVRPIPSQ+
Sbjct:    14 DFRAKVWSMTGGPNCRPKHWRRNTAIAMFGVFLVCIPIAKLSAKLEQRPHMPVRPIPSQI 73

Query:    76 WCKNFGTKD 84
             WCKNFGTKD
Sbjct:    74 WCKNFGTKD 82


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.139   0.494    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       85        72   0.00091  102 3  12 22  0.46    28
                                                     29  0.43    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  474 (50 KB)
  Total size of DFA:  89 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.26u 0.13s 7.39t   Elapsed:  00:00:00
  Total cpu time:  7.26u 0.13s 7.39t   Elapsed:  00:00:00
  Start:  Fri May 10 00:21:03 2013   End:  Fri May 10 00:21:03 2013

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