Your job contains 1 sequence.
>034748
MDKIGTVEPTLEDFSEKKKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARV
VVQGATVGLMVGTAYYYGDTPWQSK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034748
(85 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2097890 - symbol:AT3G48030 "AT3G48030" species... 333 3.8e-30 1
UNIPROTKB|F1NUW0 - symbol:HIGD2A "Uncharacterized protein... 172 4.4e-13 1
UNIPROTKB|Q9BW72 - symbol:HIGD2A "HIG1 domain family memb... 155 2.8e-11 1
UNIPROTKB|I3LSP3 - symbol:HIGD2A "Uncharacterized protein... 153 4.5e-11 1
UNIPROTKB|Q05AT5 - symbol:HIGD2A "HIG1 domain family, mem... 151 7.4e-11 1
MGI|MGI:1914294 - symbol:Higd2a "HIG1 domain family, memb... 151 7.4e-11 1
RGD|1309691 - symbol:Higd2a "HIG1 hypoxia inducible domai... 151 7.4e-11 1
RGD|1586494 - symbol:Higd2al1 "HIG1 hypoxia inducible dom... 151 7.4e-11 1
UNIPROTKB|Q4VC39 - symbol:HIGD2B "Putative HIG1 domain fa... 143 5.2e-10 1
ZFIN|ZDB-GENE-050417-119 - symbol:higd2a "HIG1 hypoxia in... 142 6.6e-10 1
UNIPROTKB|F1PA57 - symbol:HIGD2A "Uncharacterized protein... 139 1.4e-09 1
WB|WBGene00011859 - symbol:T20D3.6 species:6239 "Caenorha... 121 1.1e-07 1
POMBASE|SPAC25B8.07c - symbol:SPAC25B8.07c "hypoxia induc... 103 9.0e-06 1
SGD|S000004492 - symbol:RCF1 "Cytochrome c oxidase subuni... 100 1.9e-05 1
UNIPROTKB|Q9Y241 - symbol:HIGD1A "HIG1 domain family memb... 84 0.00093 1
>TAIR|locus:2097890 [details] [associations]
symbol:AT3G48030 "AT3G48030" species:3702 "Arabidopsis
thaliana" [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF04588 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL049658 EMBL:AB099346 EMBL:BT008566 EMBL:BT008679
IPI:IPI00518659 IPI:IPI00656859 IPI:IPI00656975 PIR:T06680
RefSeq:NP_190386.1 UniGene:At.35746 ProteinModelPortal:Q7X843
SMR:Q7X843 PaxDb:Q7X843 PRIDE:Q7X843 EnsemblPlants:AT3G48030.1
GeneID:823958 KEGG:ath:AT3G48030 TAIR:At3g48030 eggNOG:NOG250531
HOGENOM:HOG000034172 InParanoid:Q7X843 OMA:RFKSTNE PhylomeDB:Q7X843
ProtClustDB:CLSN2913369 Genevestigator:Q7X843 GermOnline:AT3G48030
InterPro:IPR007667 PROSITE:PS51503 Uniprot:Q7X843
Length = 349
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 63/80 (78%), Positives = 72/80 (90%)
Query: 4 IGTVEPTLEDFSEKKKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
+ +VEP +ED ++KKRVRNPLVP+GALMTAGVLTAGLISFR+GNS LGQ+LMRARVVVQ
Sbjct: 1 MSSVEPDMEDLFQEKKRVRNPLVPLGALMTAGVLTAGLISFRRGNSQLGQVLMRARVVVQ 60
Query: 64 GATVGLMVGTAYYYGDTPWQ 83
GATV LMVGT YYYGD PW+
Sbjct: 61 GATVALMVGTGYYYGDNPWK 80
>UNIPROTKB|F1NUW0 [details] [associations]
symbol:HIGD2A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0097250
"mitochondrial respiratory chain supercomplex assembly"
evidence=IEA] Pfam:PF04588 GO:GO:0016021 GO:GO:0005739
InterPro:IPR007667 PROSITE:PS51503 GeneTree:ENSGT00390000010724
OMA:EAPFESS EMBL:AADN02028710 IPI:IPI00580466
Ensembl:ENSGALT00000005300 Uniprot:F1NUW0
Length = 106
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 12 EDFSEK-KKRVR-NPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGL 69
E F++K +++ R NPLVP+G L T GVLT GLISF++GN+ QL+MRARVV QG TV
Sbjct: 33 EGFADKFRRKTRENPLVPLGCLCTLGVLTYGLISFKRGNTRHSQLMMRARVVAQGFTVAA 92
Query: 70 MVG 72
++G
Sbjct: 93 LLG 95
>UNIPROTKB|Q9BW72 [details] [associations]
symbol:HIGD2A "HIG1 domain family member 2A, mitochondrial"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0070469 "respiratory chain" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IDA] Pfam:PF04588
GO:GO:0016021 GO:GO:0043066 GO:GO:0005743 GO:GO:0022900
GO:GO:0070469 eggNOG:NOG250531 InterPro:IPR007667 PROSITE:PS51503
HOGENOM:HOG000234513 HOVERGEN:HBG054361 EMBL:BC000587 EMBL:BC007502
IPI:IPI00020883 RefSeq:NP_620175.1 UniGene:Hs.534575
ProteinModelPortal:Q9BW72 IntAct:Q9BW72 PhosphoSite:Q9BW72
DMDM:74733402 PaxDb:Q9BW72 PeptideAtlas:Q9BW72 PRIDE:Q9BW72
DNASU:192286 Ensembl:ENST00000274787 GeneID:192286 KEGG:hsa:192286
UCSC:uc003meg.3 CTD:192286 GeneCards:GC05P175815 H-InvDB:HIX0005440
H-InvDB:HIX0038135 HGNC:HGNC:28311 HPA:HPA042715 neXtProt:NX_Q9BW72
PharmGKB:PA142671685 InParanoid:Q9BW72 OMA:GQSQRSQ
OrthoDB:EOG4D7Z78 PhylomeDB:Q9BW72 GenomeRNAi:192286 NextBio:89352
Bgee:Q9BW72 CleanEx:HS_HIGD2A Genevestigator:Q9BW72
GermOnline:ENSG00000146066 Uniprot:Q9BW72
Length = 106
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 36/72 (50%), Positives = 44/72 (61%)
Query: 6 TVEPTLEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
TV E F EK +K NP+VPIG L TA LT GL SF +GNS QL+MR R+ Q
Sbjct: 27 TVYRNPESFKEKFVRKTRENPVVPIGCLATAAALTYGLYSFHRGNSQRSQLMMRTRIAAQ 86
Query: 64 GATVG-LMVGTA 74
G TV +++G A
Sbjct: 87 GFTVAAILLGLA 98
>UNIPROTKB|I3LSP3 [details] [associations]
symbol:HIGD2A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097250 "mitochondrial respiratory chain supercomplex
assembly" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF04588
GO:GO:0016021 GO:GO:0005739 InterPro:IPR007667 PROSITE:PS51503
OMA:GQSQRSQ GeneTree:ENSGT00390000010724 EMBL:FP326731
Ensembl:ENSSSCT00000029938 Uniprot:I3LSP3
Length = 106
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 36/72 (50%), Positives = 43/72 (59%)
Query: 6 TVEPTLEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
TV T E F EK +K NP+VPIG L TA LT GL F +G S QL+MR R+ Q
Sbjct: 27 TVYSTSESFKEKFIRKTRENPMVPIGCLGTASALTYGLYCFHRGQSQRSQLMMRTRIAAQ 86
Query: 64 GAT-VGLMVGTA 74
G T V ++VG A
Sbjct: 87 GFTIVAILVGLA 98
>UNIPROTKB|Q05AT5 [details] [associations]
symbol:HIGD2A "HIG1 domain family, member 2A" species:9913
"Bos taurus" [GO:0097250 "mitochondrial respiratory chain
supercomplex assembly" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF04588 GO:GO:0016021 GO:GO:0005739 eggNOG:NOG250531
InterPro:IPR007667 PROSITE:PS51503 HOGENOM:HOG000234513
HOVERGEN:HBG054361 CTD:192286 OMA:GQSQRSQ OrthoDB:EOG4D7Z78
GeneTree:ENSGT00390000010724 EMBL:DAAA02020033 EMBL:BC123383
IPI:IPI00705595 RefSeq:NP_001071329.1 UniGene:Bt.33869
Ensembl:ENSBTAT00000014213 GeneID:506420 KEGG:bta:506420
InParanoid:Q05AT5 NextBio:20867602 Uniprot:Q05AT5
Length = 106
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 36/72 (50%), Positives = 43/72 (59%)
Query: 6 TVEPTLEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
+V T E F EK +K NPLVPIG L TA LT GL F +G S QL+MR R+ Q
Sbjct: 27 SVYSTSESFKEKFIRKTRENPLVPIGCLGTAAALTYGLYCFHRGQSQRSQLMMRTRIAAQ 86
Query: 64 GAT-VGLMVGTA 74
G T V ++VG A
Sbjct: 87 GFTIVAILVGLA 98
>MGI|MGI:1914294 [details] [associations]
symbol:Higd2a "HIG1 domain family, member 2A" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0097250
"mitochondrial respiratory chain supercomplex assembly"
evidence=IMP] MGI:MGI:1914294 Pfam:PF04588 GO:GO:0016021
GO:GO:0005739 GO:GO:0005743 GO:GO:0022900 eggNOG:NOG250531
InterPro:IPR007667 PROSITE:PS51503 GO:GO:0097250
HOGENOM:HOG000234513 HOVERGEN:HBG054361 CTD:192286 OMA:GQSQRSQ
OrthoDB:EOG4D7Z78 EMBL:AK005269 EMBL:AK008387 EMBL:BC021471
IPI:IPI00132608 RefSeq:NP_080209.1 UniGene:Mm.29353 STRING:Q9CQJ1
PhosphoSite:Q9CQJ1 PaxDb:Q9CQJ1 PRIDE:Q9CQJ1
Ensembl:ENSMUST00000026986 GeneID:67044 KEGG:mmu:67044
UCSC:uc007qol.1 GeneTree:ENSGT00390000010724 InParanoid:Q9CQJ1
NextBio:323408 Bgee:Q9CQJ1 CleanEx:MM_HIGD2A Genevestigator:Q9CQJ1
GermOnline:ENSMUSG00000025868 Uniprot:Q9CQJ1
Length = 106
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 35/72 (48%), Positives = 43/72 (59%)
Query: 6 TVEPTLEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
TV E F EK +K NP+VPIG L TA LT GL F +G SH QL+MR R+ Q
Sbjct: 27 TVYSNPEGFKEKFIRKTRENPMVPIGCLGTAAALTYGLYCFHRGQSHRSQLMMRTRIAAQ 86
Query: 64 GATV-GLMVGTA 74
G TV +++G A
Sbjct: 87 GFTVVAILLGLA 98
>RGD|1309691 [details] [associations]
symbol:Higd2a "HIG1 hypoxia inducible domain family, member 2A"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0097250 "mitochondrial respiratory chain
supercomplex assembly" evidence=ISO] RGD:1309691 Pfam:PF04588
GO:GO:0016021 eggNOG:NOG250531 InterPro:IPR007667 PROSITE:PS51503
EMBL:CH474032 HOGENOM:HOG000234513 HOVERGEN:HBG054361 CTD:192286
OMA:GQSQRSQ OrthoDB:EOG4D7Z78 GeneTree:ENSGT00390000010724
EMBL:BC166544 IPI:IPI00568108 RefSeq:NP_001099572.1
UniGene:Rn.13525 STRING:B2GV65 Ensembl:ENSRNOT00000023515
GeneID:290999 KEGG:rno:290999 UCSC:RGD:1309691 NextBio:631955
Genevestigator:B2GV65 Uniprot:B2GV65
Length = 106
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 35/72 (48%), Positives = 43/72 (59%)
Query: 6 TVEPTLEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
TV E F EK +K NP+VPIG L TA LT GL F +G SH QL+MR R+ Q
Sbjct: 27 TVYTNPEGFKEKFIRKTRENPMVPIGCLGTAAALTYGLYCFHRGQSHRSQLMMRTRIAAQ 86
Query: 64 GATV-GLMVGTA 74
G TV +++G A
Sbjct: 87 GFTVVAILLGLA 98
>RGD|1586494 [details] [associations]
symbol:Higd2al1 "HIG1 hypoxia inducible domain family, member
2A-like 1" species:10116 "Rattus norvegicus" [GO:0016021 "integral
to membrane" evidence=IEA] RGD:1586494 Pfam:PF04588 GO:GO:0016021
InterPro:IPR007667 PROSITE:PS51503 OrthoDB:EOG4D7Z78
GeneTree:ENSGT00390000010724 IPI:IPI00188291 RefSeq:XP_001067593.1
RefSeq:XP_002724818.1 PRIDE:D3ZU87 Ensembl:ENSRNOT00000001416
GeneID:688606 KEGG:rno:688606 UCSC:RGD:1586494 CTD:688606
OMA:NTRDETT NextBio:736879 Uniprot:D3ZU87
Length = 106
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 35/72 (48%), Positives = 43/72 (59%)
Query: 6 TVEPTLEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
TV E F EK +K NP+VPIG L TA LT GL F +G SH QL+MR R+ Q
Sbjct: 27 TVYTNPEGFKEKFIRKTRENPMVPIGCLGTAAALTYGLYCFHRGQSHRSQLMMRTRIAAQ 86
Query: 64 GATV-GLMVGTA 74
G TV +++G A
Sbjct: 87 GFTVVAILLGLA 98
>UNIPROTKB|Q4VC39 [details] [associations]
symbol:HIGD2B "Putative HIG1 domain family member 2B"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF04588 GO:GO:0016021 EMBL:CH471082
eggNOG:NOG250531 InterPro:IPR007667 PROSITE:PS51503
HOGENOM:HOG000234513 HOVERGEN:HBG054361 EMBL:BC040890
IPI:IPI00038613 UniGene:Hs.434111 ProteinModelPortal:Q4VC39
STRING:Q4VC39 DMDM:74753804 PRIDE:Q4VC39 Ensembl:ENST00000311755
GeneCards:GC15M072968 HGNC:HGNC:26984 HPA:HPA019016 HPA:HPA042505
neXtProt:NX_Q4VC39 InParanoid:Q4VC39 OMA:EAPFESS OrthoDB:EOG46WZ9X
PhylomeDB:Q4VC39 Bgee:Q4VC39 Genevestigator:Q4VC39 Uniprot:Q4VC39
Length = 106
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 33/72 (45%), Positives = 43/72 (59%)
Query: 6 TVEPTLEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQ 63
TV E F EK +K NP+VPIG L TA VLT GL F QGNS +L+M ++ Q
Sbjct: 27 TVYSNPEGFKEKFLRKTRENPVVPIGFLCTAAVLTNGLYCFHQGNSQCSRLMMHTQIAAQ 86
Query: 64 GATVG-LMVGTA 74
G T+ +++G A
Sbjct: 87 GFTIAAILLGLA 98
>ZFIN|ZDB-GENE-050417-119 [details] [associations]
symbol:higd2a "HIG1 hypoxia inducible domain
family, member 2A" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF04588
ZFIN:ZDB-GENE-050417-119 GO:GO:0016021 InterPro:IPR007667
PROSITE:PS51503 GeneTree:ENSGT00390000010724 EMBL:FP074873
IPI:IPI00570169 Ensembl:ENSDART00000074216 Bgee:F1QXM0
Uniprot:F1QXM0
Length = 130
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 33/66 (50%), Positives = 41/66 (62%)
Query: 12 EDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATV-G 68
E F +K +K NP VPIG L TAG L GL +F+QG + QLLMR R+ QG TV
Sbjct: 57 EGFKDKFIRKTKENPFVPIGCLGTAGALIYGLGAFKQGKTRQSQLLMRTRIFAQGFTVVA 116
Query: 69 LMVGTA 74
++VG A
Sbjct: 117 IIVGVA 122
>UNIPROTKB|F1PA57 [details] [associations]
symbol:HIGD2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0097250 "mitochondrial respiratory chain
supercomplex assembly" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
EMBL:AAEX03007398 Ensembl:ENSCAFT00000003179
GeneTree:ENSGT00390000010724 OMA:GQSQRSQ GO:GO:0016021
GO:GO:0005739 InterPro:IPR007667 Pfam:PF04588 PROSITE:PS51503
Uniprot:F1PA57
Length = 106
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 32/64 (50%), Positives = 38/64 (59%)
Query: 10 TLEDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATV 67
T E F EK +K NP+V IG L TA LT GL F QG SH QL+MR R+ QG TV
Sbjct: 31 TPESFKEKFLRKTHENPMVSIGCLGTAAALTYGLYCFHQGQSHRLQLMMRTRIAAQGFTV 90
Query: 68 GLMV 71
++
Sbjct: 91 AAIL 94
>WB|WBGene00011859 [details] [associations]
symbol:T20D3.6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF04588 GO:GO:0040011 InterPro:IPR007667 PROSITE:PS51503
EMBL:Z68220 eggNOG:NOG255938 GeneTree:ENSGT00530000066924
PIR:T25028 RefSeq:NP_501643.1 PaxDb:O01257 EnsemblMetazoa:T20D3.6.1
EnsemblMetazoa:T20D3.6.2 GeneID:177762 KEGG:cel:CELE_T20D3.6
UCSC:T20D3.6.2 CTD:177762 WormBase:T20D3.6 HOGENOM:HOG000022119
InParanoid:O01257 OMA:PLIPQDM NextBio:898278 Uniprot:O01257
Length = 144
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 18 KKRVRNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYY 77
+K + NPLVP+G L T G L +++ + +S Q MR RVV QG TV +VG A +
Sbjct: 50 QKALNNPLVPLGMLATTGCLIGMMVATLRRSSRGAQYFMRGRVVAQGFTVAALVGGAVMF 109
Query: 78 G 78
G
Sbjct: 110 G 110
>POMBASE|SPAC25B8.07c [details] [associations]
symbol:SPAC25B8.07c "hypoxia induced family protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISS;IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] PomBase:SPAC25B8.07c
Pfam:PF04588 GO:GO:0016021 GO:GO:0005739 EMBL:CU329670
GO:GO:0031966 InterPro:IPR007667 PROSITE:PS51503 OrthoDB:EOG49GPS9
PIR:T50194 RefSeq:NP_594467.1 EnsemblFungi:SPAC25B8.07c.1
GeneID:2542662 KEGG:spo:SPAC25B8.07c eggNOG:NOG255938
NextBio:20803710 Uniprot:Q9UTB1
Length = 113
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 25/66 (37%), Positives = 34/66 (51%)
Query: 15 SEKKKRV--RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVG 72
SEK K V RNP +P+G LMT G A R+ N + MR RV+ QG T+ +
Sbjct: 28 SEKLKYVFVRNPFIPLGCLMTVGTFLASGYYIRRENHLMANKFMRYRVMSQGFTLAALAF 87
Query: 73 TAYYYG 78
+ + G
Sbjct: 88 SVLFIG 93
>SGD|S000004492 [details] [associations]
symbol:RCF1 "Cytochrome c oxidase subunit" species:4932
"Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0097250 "mitochondrial respiratory chain
supercomplex assembly" evidence=IMP] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IGI] [GO:0031305
"integral to mitochondrial inner membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0097249
"mitochondrial respiratory chain supercomplex" evidence=IDA]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IPI] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] SGD:S000004492 Pfam:PF04588
EMBL:BK006946 GO:GO:0031305 EMBL:Z46659 InterPro:IPR007667
PROSITE:PS51503 GO:GO:0033617 GO:GO:0005751 GO:GO:0097250
OrthoDB:EOG49GPS9 EMBL:AY558234 PIR:S49749 RefSeq:NP_013682.1
ProteinModelPortal:Q03713 DIP:DIP-6835N IntAct:Q03713
MINT:MINT-623363 STRING:Q03713 PaxDb:Q03713 EnsemblFungi:YML030W
GeneID:854978 KEGG:sce:YML030W CYGD:YML030w eggNOG:NOG293647
OMA:DFYNENG NextBio:978091 Genevestigator:Q03713 GermOnline:YML030W
GO:GO:0097249 Uniprot:Q03713
Length = 159
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 22 RNPLVPIGALMTAGVLTAGLISFRQGNSHLGQLLMRARVVVQGATVGLMVGTAYYYG 78
+ PLVPIG L+T G + + R GN Q R RV +Q AT+ +V ++ YG
Sbjct: 30 KQPLVPIGCLLTTGAVILAAQNVRLGNKWKAQYYFRWRVGLQAATLVALVAGSFIYG 86
>UNIPROTKB|Q9Y241 [details] [associations]
symbol:HIGD1A "HIG1 domain family member 1A, mitochondrial"
species:9606 "Homo sapiens" [GO:0006950 "response to stress"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0070469
"respiratory chain" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] Pfam:PF04588 GO:GO:0016021 GO:GO:0043066
GO:GO:0043234 GO:GO:0006950 GO:GO:0005743 GO:GO:0022900
GO:GO:0070469 InterPro:IPR007667 PROSITE:PS51503 EMBL:AF145385
EMBL:AF077034 EMBL:AL110233 EMBL:CR457385 EMBL:BC000601
EMBL:BC009583 EMBL:BC009594 EMBL:BC070277 EMBL:BG400624
IPI:IPI00295621 IPI:IPI00856008 PIR:T14766 RefSeq:NP_001093138.1
RefSeq:NP_001093139.1 RefSeq:NP_054775.2 UniGene:Hs.593134
UniGene:Hs.728813 PDB:2LOM PDBsum:2LOM ProteinModelPortal:Q9Y241
SMR:Q9Y241 IntAct:Q9Y241 STRING:Q9Y241 PhosphoSite:Q9Y241
DMDM:74753465 PaxDb:Q9Y241 PRIDE:Q9Y241 DNASU:25994
Ensembl:ENST00000321331 Ensembl:ENST00000418900
Ensembl:ENST00000452906 GeneID:25994 KEGG:hsa:25994 UCSC:uc003cma.4
UCSC:uc010hid.3 CTD:25994 GeneCards:GC03M042801 HGNC:HGNC:29527
HPA:HPA043336 neXtProt:NX_Q9Y241 PharmGKB:PA142671681
eggNOG:NOG323028 HOGENOM:HOG000234513 HOVERGEN:HBG054361
InParanoid:Q9Y241 OMA:GDTKMSV OrthoDB:EOG4Z0B78 PhylomeDB:Q9Y241
GenomeRNAi:25994 NextBio:47702 ArrayExpress:Q9Y241 Bgee:Q9Y241
CleanEx:HS_HIGD1A Genevestigator:Q9Y241 GermOnline:ENSG00000181061
Uniprot:Q9Y241
Length = 93
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 12 EDFSEK--KKRVRNPLVPIGALMTAGVLTAGLISFR-QGNSHLGQLLMRARVVVQGATVG 68
ED K +K P VP+G A ++ GL + +GN+ + L+ RV QG VG
Sbjct: 14 EDQGSKLIRKAKEAPFVPVGIAGFAAIVAYGLYKLKSRGNTKMSIHLIHMRVAAQGFVVG 73
Query: 69 LM-VGTAY 75
M VG Y
Sbjct: 74 AMTVGMGY 81
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 85 85 0.00091 102 3 11 22 0.44 29
29 0.46 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 488 (52 KB)
Total size of DFA: 89 KB (2067 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.88u 0.17s 9.05t Elapsed: 00:00:00
Total cpu time: 8.88u 0.17s 9.05t Elapsed: 00:00:00
Start: Fri May 10 00:22:23 2013 End: Fri May 10 00:22:23 2013