Query 034751
Match_columns 85
No_of_seqs 18 out of 20
Neff 2.7
Searched_HMMs 29240
Date Mon Mar 25 09:41:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034751.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034751hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ezw_A Glycerol kinase; glycer 68.0 2.2 7.4E-05 33.1 1.7 54 13-74 439-495 (526)
2 1lhs_A Myoglobin; oxygen stora 55.0 12 0.00041 24.3 3.3 33 53-85 119-151 (153)
3 2dc3_A Cytoglobin; myoglobin, 41.7 25 0.00084 23.9 3.3 33 53-85 142-174 (193)
4 1a6m_A Myoglobin; heme protein 40.7 21 0.0007 23.1 2.7 33 53-85 119-151 (151)
5 3tei_B Ribosomal protein S6 ki 36.5 14 0.00047 19.7 1.1 8 3-10 9-16 (26)
6 1jf3_A Monomer hemoglobin comp 34.2 43 0.0015 21.0 3.4 30 53-82 118-147 (147)
7 1h3o_A Transcription initiatio 31.3 20 0.0007 22.7 1.4 28 2-33 32-59 (75)
8 1g2y_A Hepatocyte nuclear fact 30.2 25 0.00084 19.6 1.5 19 1-19 1-21 (32)
9 2w5q_A Processed glycerol phos 28.0 27 0.00093 25.8 1.8 19 67-85 229-247 (424)
10 3lxq_A Uncharacterized protein 27.8 32 0.0011 25.3 2.2 19 67-85 276-294 (450)
11 3ed4_A Arylsulfatase; structur 27.0 29 0.00099 25.7 1.8 19 67-85 275-293 (502)
12 1x46_A Globin chain, hemoglobi 26.4 52 0.0018 20.8 2.8 26 53-79 124-149 (150)
13 2w8d_A Processed glycerol phos 26.4 30 0.001 25.7 1.8 19 67-85 229-247 (436)
14 3b5q_A Putative sulfatase YIDJ 24.8 40 0.0014 25.4 2.3 19 67-85 255-273 (482)
15 1hlm_A Hemoglobin (cyano Met); 24.1 31 0.001 22.1 1.3 30 53-82 130-159 (159)
16 1fsu_A N-acetylgalactosamine-4 23.9 36 0.0012 25.5 1.8 19 67-85 230-248 (492)
17 1gcv_B Hemoglobin; oxygen stor 23.8 66 0.0022 20.6 2.9 25 53-77 108-132 (136)
18 1auk_A Arylsulfatase A; cerebr 23.1 38 0.0013 25.6 1.8 19 67-85 234-252 (489)
19 1hdh_A Arylsulfatase; hydrolas 22.3 40 0.0014 25.4 1.8 19 67-85 288-306 (536)
20 2gso_A Phosphodiesterase-nucle 22.1 30 0.001 24.8 1.1 18 67-84 189-206 (393)
21 1out_A Hemoglobin I; heme, oxy 22.1 64 0.0022 20.6 2.6 25 53-77 115-139 (143)
22 1q1f_A Neuroglobin; globin fol 21.7 85 0.0029 19.5 3.1 26 53-78 121-146 (151)
23 2aa1_B Hemoglobin beta-C chain 21.7 77 0.0026 20.3 2.9 25 53-77 118-142 (146)
24 2qzu_A Putative sulfatase YIDJ 21.6 42 0.0014 25.1 1.8 18 68-85 285-302 (491)
25 3d1k_B Hemoglobin subunit beta 21.2 80 0.0027 20.2 2.9 25 53-77 118-142 (146)
26 1xq5_A Hemoglobin alpha-1 chai 20.5 88 0.003 19.8 3.0 25 53-77 115-139 (143)
27 1tu9_A Hypothetical protein PA 20.4 90 0.0031 19.3 3.0 26 53-78 105-130 (134)
28 1fc3_A SPO0A; response regulat 20.3 27 0.00093 23.4 0.5 42 29-77 48-93 (120)
29 2nrl_A Myoglobin; transport pr 20.2 89 0.003 19.9 3.0 29 57-85 117-145 (147)
30 1v4x_B Hemoglobin beta chain; 20.1 87 0.003 20.0 2.9 25 53-77 118-142 (146)
No 1
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=67.98 E-value=2.2 Score=33.11 Aligned_cols=54 Identities=20% Similarity=0.204 Sum_probs=30.2
Q ss_pred HHHhhhhhceeEEEeehhhhhcccCCCCCcc---ccccccccchhhhhhhHHHHHHHHHHHhhHH
Q 034751 13 FALGSAITGFVVFEQRKCIYGSISDHQSHDE---IKSQTREPIFARKTRSEFAHLWNKAVDQTFG 74 (85)
Q Consensus 13 ~aLGs~~~g~~V~~qRr~Iy~Sisd~~~~~~---~~~~~~~p~fgk~~r~e~a~~WNk~VD~tfG 74 (85)
++||+|+.+++-. -+|.++.++..... .+.|..+. .-+.+.-.-|+|+|+++++
T Consensus 439 ~alGAA~lA~~a~----G~~~~~~e~~~~~~~~~~~~P~~~~----~~~~~~y~~w~~av~r~~~ 495 (526)
T 3ezw_A 439 TALGAAYLAGLAV----GFWQNLDELQEKAVIEREFRPGIET----TERNYRYAGWKKAVKRAMA 495 (526)
T ss_dssp HHHHHHHHHHHHT----TSSSCGGGSTTCCCEEEEECCCSCH----HHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHh----CCCCCHHHHHHhcCCCeEEcCCCCH----HHHHHHHHHHHHHHHHHhC
Confidence 3455554444432 35778777632211 24443332 2345556679999999986
No 2
>1lhs_A Myoglobin; oxygen storage; HET: HEM; 2.00A {Caretta caretta} SCOP: a.1.1.2 PDB: 1lht_A*
Probab=54.97 E-value=12 Score=24.28 Aligned_cols=33 Identities=9% Similarity=0.125 Sum_probs=28.9
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHHHhhccCCC
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV~~LssR~w 85 (85)
||.....|+..+|.|..+..-.-+++-...-+|
T Consensus 119 lg~~~t~e~~~AW~k~~~~va~~l~~~y~~~~~ 151 (153)
T 1lhs_A 119 HPSDFGADSQAAMKKALELFRNDMASKYKEFGF 151 (153)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 678888899999999999999988888777777
No 3
>2dc3_A Cytoglobin; myoglobin, heme, oxygen transport, oxygen storage, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.68A {Homo sapiens} PDB: 1v5h_A* 3ag0_A* 1urv_A* 1umo_A* 1ury_A* 1ut0_A* 1ux9_A*
Probab=41.71 E-value=25 Score=23.91 Aligned_cols=33 Identities=24% Similarity=0.525 Sum_probs=27.0
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHHHhhccCCC
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV~~LssR~w 85 (85)
+|.....|+..+|.|..+....-+.+-....+|
T Consensus 142 lg~~~t~e~~~AW~k~~~~va~~l~~~y~~~~~ 174 (193)
T 2dc3_A 142 FASDFPPETQRAWAKLRGLIYSHVTAAYKEVGW 174 (193)
T ss_dssp TGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 688888899999999999888887776666665
No 4
>1a6m_A Myoglobin; heme protein, model compounds, oxygen storage, ligand binding geometry, conformational substates, oxygen transpor; HET: HEM; 1.00A {Physeter catodon} SCOP: a.1.1.2 PDB: 1a6k_A* 1a6n_A* 2jho_A* 1ufp_A* 2eb9_A* 2eb8_A* 2w6w_A* 2ekt_A* 105m_A* 104m_A* 1ajh_A* 1ajg_A* 1bvc_A* 1bvd_A* 1bz6_A* 1bzr_A* 1cq2_A* 1duk_A* 1ebc_A* 1hjt_A* ...
Probab=40.72 E-value=21 Score=23.10 Aligned_cols=33 Identities=12% Similarity=0.160 Sum_probs=27.0
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHHHhhccCCC
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV~~LssR~w 85 (85)
+|.....|+..+|.|..+..-.-+++-...=||
T Consensus 119 lg~~~t~e~~~AW~k~~~~v~~~l~~~y~e~~~ 151 (151)
T 1a6m_A 119 HPGDFGADAQGAMNKALELFRKDIAAKYKELGY 151 (151)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 688888899999999999888888776665555
No 5
>3tei_B Ribosomal protein S6 kinase alpha-1; transferase; HET: ANP; 2.40A {Homo sapiens}
Probab=36.54 E-value=14 Score=19.68 Aligned_cols=8 Identities=63% Similarity=0.887 Sum_probs=6.9
Q ss_pred hhHHHHHH
Q 034751 3 SVLAQERL 10 (85)
Q Consensus 3 SIlaQERL 10 (85)
|||+|.|.
T Consensus 9 silaqrrv 16 (26)
T 3tei_B 9 SILAQRRV 16 (26)
T ss_pred HHHHHHHH
Confidence 89999885
No 6
>1jf3_A Monomer hemoglobin component III; oxygen storage/transport complex; HET: HEM; 1.40A {Glycera dibranchiata} SCOP: a.1.1.2 PDB: 1jl7_A* 1jf4_A* 1jl6_A* 1vre_A* 1vrf_A* 1hbg_A* 2hbg_A*
Probab=34.18 E-value=43 Score=21.03 Aligned_cols=30 Identities=20% Similarity=0.347 Sum_probs=24.0
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHHHhhcc
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVIESFSS 82 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV~~Lss 82 (85)
+|.....|+..+|.|..+..-.-++.-+.|
T Consensus 118 lg~~~t~e~~~AW~~~~~~v~~~l~~~~~~ 147 (147)
T 1jf3_A 118 IGGKMNAAAKDAWAAAYGDISGALISGLQS 147 (147)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hcccCCHHHHHHHHHHHHHHHHHHHhhccC
Confidence 577777899999999999888877776543
No 7
>1h3o_A Transcription initiation factor TFIID 135 kDa subunit; transcription/TBP-associated factors, TBP-associated factors; 2.3A {Homo sapiens} SCOP: a.22.1.3
Probab=31.30 E-value=20 Score=22.69 Aligned_cols=28 Identities=21% Similarity=0.229 Sum_probs=13.7
Q ss_pred hhhHHHHHHHHHHHhhhhhceeEEEeehhhhh
Q 034751 2 ISVLAQERLLGFALGSAITGFVVFEQRKCIYG 33 (85)
Q Consensus 2 iSIlaQERLLG~aLGs~~~g~~V~~qRr~Iy~ 33 (85)
||.++||||-|---..+- +-.||.-.|+
T Consensus 32 iS~a~qeRLr~llekl~~----~a~~R~~~~K 59 (75)
T 1h3o_A 32 VSHATQQRLQNLVEKISE----TAQQKNFSYK 59 (75)
T ss_dssp HHHHHHHHHHHHHHHHHC--------------
T ss_pred hHHHHHHHHHHHHHHHHH----HHHhhhhhhc
Confidence 799999999976555443 5577776664
No 8
>1g2y_A Hepatocyte nuclear factor 1-alpha; dimerization domain, four-helix bundle, transcription factor, selenomethionine; 1.00A {Synthetic} SCOP: a.34.2.1 PDB: 1g39_A 1f93_E 1g2z_A 1jb6_A 2gyp_A
Probab=30.23 E-value=25 Score=19.59 Aligned_cols=19 Identities=37% Similarity=0.501 Sum_probs=14.0
Q ss_pred ChhhHH--HHHHHHHHHhhhh
Q 034751 1 MISVLA--QERLLGFALGSAI 19 (85)
Q Consensus 1 miSIla--QERLLG~aLGs~~ 19 (85)
|+|=|. |+-||++-|+|-+
T Consensus 1 mvskLs~LQ~eLL~aLL~SGl 21 (32)
T 1g2y_A 1 MVSKLSQLQTEMLAALLESGL 21 (32)
T ss_dssp CCCHHHHHHHHHHHHHHHTTC
T ss_pred CcchHHHHHHHHHHHHHHcCC
Confidence 445443 8999999998854
No 9
>2w5q_A Processed glycerol phosphate lipoteichoic acid synthase; transmembrane, cell WALL biogenesis/degradation, LTAS, membrane, secreted; 1.20A {Staphylococcus aureus} PDB: 2w5s_A* 2w5t_A* 2w5r_A*
Probab=28.05 E-value=27 Score=25.80 Aligned_cols=19 Identities=16% Similarity=0.441 Sum_probs=16.9
Q ss_pred HHHHhhHHHHHHhhccCCC
Q 034751 67 KAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 67 k~VD~tfG~lV~~LssR~w 85 (85)
..+|+.+|++++.|..+|+
T Consensus 229 ~~~D~~iG~ll~~Lk~~g~ 247 (424)
T 2w5q_A 229 RYLDEALEEYINDLKKKGL 247 (424)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 5689999999999998874
No 10
>3lxq_A Uncharacterized protein VP1736; alkaline, phosphatase, MDOB, sulfatase, PSI, MCSG, structural genomics; 1.95A {Vibrio parahaemolyticus}
Probab=27.79 E-value=32 Score=25.30 Aligned_cols=19 Identities=16% Similarity=0.324 Sum_probs=16.6
Q ss_pred HHHHhhHHHHHHhhccCCC
Q 034751 67 KAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 67 k~VD~tfG~lV~~LssR~w 85 (85)
+.+|+.+|.+++.|..+||
T Consensus 276 ~~~D~~ig~~l~~L~~~g~ 294 (450)
T 3lxq_A 276 KYSDYALGTFFDKAKKSSY 294 (450)
T ss_dssp HHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999875
No 11
>3ed4_A Arylsulfatase; structural genomics, PSI-2, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, transferase; 1.70A {Escherichia coli}
Probab=27.04 E-value=29 Score=25.72 Aligned_cols=19 Identities=21% Similarity=0.389 Sum_probs=16.6
Q ss_pred HHHHhhHHHHHHhhccCCC
Q 034751 67 KAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 67 k~VD~tfG~lV~~LssR~w 85 (85)
..+|+.+|+|++.|.++|.
T Consensus 275 ~~~D~~iG~ll~~L~~~g~ 293 (502)
T 3ed4_A 275 SYLDAQVGKVLDKIKAMGE 293 (502)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 4789999999999998763
No 12
>1x46_A Globin chain, hemoglobin component VII; diptera, midge larva, oxygen storage/transport complex; HET: HEM; 1.50A {Tokunagayusurika akamusi}
Probab=26.44 E-value=52 Score=20.84 Aligned_cols=26 Identities=12% Similarity=0.287 Sum_probs=20.7
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHHHh
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVIES 79 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV~~ 79 (85)
+| ....|+..+|.|..+....-++..
T Consensus 124 lg-~~t~e~~~AW~~~~~~i~~~l~~~ 149 (150)
T 1x46_A 124 AS-GYNAGTKKAWDSAFNNMYSVVFPE 149 (150)
T ss_dssp ST-TCCHHHHHHHHHHHHHHHHHHGGG
T ss_pred hc-cCCHHHHHHHHHHHHHHHHHHHhc
Confidence 67 788899999999988877766654
No 13
>2w8d_A Processed glycerol phosphate lipoteichoic acid SY; transferase, phosphatase, cell membrane, transmembrane, LTA, membrane, secreted, cell WALL; HET: TPO PG4; 2.35A {Bacillus subtilis}
Probab=26.39 E-value=30 Score=25.73 Aligned_cols=19 Identities=16% Similarity=0.342 Sum_probs=16.7
Q ss_pred HHHHhhHHHHHHhhccCCC
Q 034751 67 KAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 67 k~VD~tfG~lV~~LssR~w 85 (85)
..+|+.+|++++.|..+|+
T Consensus 229 ~~~D~~iG~ll~~Lk~~gl 247 (436)
T 2w8d_A 229 HYLDQSIEQFFNDLKKDGL 247 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 4689999999999998875
No 14
>3b5q_A Putative sulfatase YIDJ; NP_810509.1, structural genomics, joint center for structural genomics, JCSG; HET: EPE; 2.40A {Bacteroides thetaiotaomicron vpi-5482}
Probab=24.82 E-value=40 Score=25.43 Aligned_cols=19 Identities=21% Similarity=0.246 Sum_probs=16.8
Q ss_pred HHHHhhHHHHHHhhccCCC
Q 034751 67 KAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 67 k~VD~tfG~lV~~LssR~w 85 (85)
..+|+.+|++++.|.++|+
T Consensus 255 ~~~D~~vG~ll~~L~~~g~ 273 (482)
T 3b5q_A 255 KMVSKQVDSVLKALYSTPA 273 (482)
T ss_dssp HHHHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 4789999999999998874
No 15
>1hlm_A Hemoglobin (cyano Met); oxygen transport; HET: HEM; 2.90A {Caudina arenicola} SCOP: a.1.1.2
Probab=24.13 E-value=31 Score=22.08 Aligned_cols=30 Identities=17% Similarity=0.269 Sum_probs=23.3
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHHHhhcc
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVIESFSS 82 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV~~Lss 82 (85)
+|.....|+..+|.|.++..-.-+++-+.|
T Consensus 130 lg~~~t~e~~~AW~~~~~~v~~~l~~~~~~ 159 (159)
T 1hlm_A 130 LGVGFTKQVHDAWAKTFAIVQGVLITKHAS 159 (159)
T ss_dssp CSSCCCTTHHHHHHHHHHHHGGGGTSTTCC
T ss_pred hcccCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 577788899999999998877776655543
No 16
>1fsu_A N-acetylgalactosamine-4-sulfatase; glycosaminoglycan degradation, hydrolase, glycopr lysosome; HET: ALS NAG; 2.50A {Homo sapiens} SCOP: c.76.1.2
Probab=23.92 E-value=36 Score=25.54 Aligned_cols=19 Identities=26% Similarity=0.478 Sum_probs=16.7
Q ss_pred HHHHhhHHHHHHhhccCCC
Q 034751 67 KAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 67 k~VD~tfG~lV~~LssR~w 85 (85)
..+|+.+|++++.|..+|+
T Consensus 230 ~~~D~~vG~ll~~L~~~g~ 248 (492)
T 1fsu_A 230 SLMDEAVGNVTAALKSSGL 248 (492)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 5699999999999998774
No 17
>1gcv_B Hemoglobin; oxygen storage/transport complex; HET: HEM; 2.00A {Mustelus griseus} SCOP: a.1.1.2 PDB: 1gcw_B*
Probab=23.80 E-value=66 Score=20.65 Aligned_cols=25 Identities=8% Similarity=0.205 Sum_probs=20.1
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHH
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVI 77 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV 77 (85)
||.....|+..+|.|+.+..-.-|+
T Consensus 108 lg~~~t~e~~~AW~k~~~~va~~l~ 132 (136)
T 1gcv_B 108 RKDCFTPHIQGIWDKFFEVVIDAIS 132 (136)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 6888888999999999887665554
No 18
>1auk_A Arylsulfatase A; cerebroside-3-sulfate hydrolysis, lysosomal enzyme, hydrolas; HET: NDG NAG; 2.10A {Homo sapiens} SCOP: c.76.1.2 PDB: 1n2k_A* 1n2l_A* 1e1z_P* 1e2s_P* 1e3c_P* 1e33_P*
Probab=23.12 E-value=38 Score=25.62 Aligned_cols=19 Identities=16% Similarity=0.408 Sum_probs=16.8
Q ss_pred HHHHhhHHHHHHhhccCCC
Q 034751 67 KAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 67 k~VD~tfG~lV~~LssR~w 85 (85)
..+|+.+|+|++.|.+.|+
T Consensus 234 ~~~D~~vG~ll~~L~~~gl 252 (489)
T 1auk_A 234 MELDAAVGTLMTAIGDLGL 252 (489)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 5799999999999998774
No 19
>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A {Pseudomonas aeruginosa} SCOP: c.76.1.2
Probab=22.27 E-value=40 Score=25.42 Aligned_cols=19 Identities=21% Similarity=0.424 Sum_probs=16.6
Q ss_pred HHHHhhHHHHHHhhccCCC
Q 034751 67 KAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 67 k~VD~tfG~lV~~LssR~w 85 (85)
..||+-+|+|++.|...|+
T Consensus 288 ~~~D~~iG~ll~~L~~~g~ 306 (536)
T 1hdh_A 288 ERMDWNIGRVVDYLRRQGE 306 (536)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 4799999999999998774
No 20
>2gso_A Phosphodiesterase-nucleotide pyrophosphatase; alpha beta, NPP, hydrolase; 1.30A {Xanthomonas axonopodis PV} PDB: 2gsn_A 2gsu_A* 2rh6_A*
Probab=22.08 E-value=30 Score=24.80 Aligned_cols=18 Identities=28% Similarity=0.615 Sum_probs=15.5
Q ss_pred HHHHhhHHHHHHhhccCC
Q 034751 67 KAVDQTFGPVIESFSSRG 84 (85)
Q Consensus 67 k~VD~tfG~lV~~LssR~ 84 (85)
+.+|+.+|+|++.|.++|
T Consensus 189 ~~~D~~ig~ll~~L~~~g 206 (393)
T 2gso_A 189 RAVDAAIGRLLAGMQRDG 206 (393)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 469999999999998765
No 21
>1out_A Hemoglobin I; heme, oxygen transport, respiratory protein, erythrocyte; HET: HEM; 2.30A {Oncorhynchus mykiss} SCOP: a.1.1.2 PDB: 1ouu_A*
Probab=22.05 E-value=64 Score=20.61 Aligned_cols=25 Identities=12% Similarity=0.081 Sum_probs=19.7
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHH
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVI 77 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV 77 (85)
||.....|+..+|.|..+..-.-++
T Consensus 115 lg~~~t~e~~~AW~k~~~~va~~l~ 139 (143)
T 1out_A 115 FPSDFTPEVHIAVDKFLAAVSAALA 139 (143)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHH
Confidence 6777888999999998887665554
No 22
>1q1f_A Neuroglobin; globin fold, heme protein, oxygen storage/transport complex; HET: HEM; 1.50A {Mus musculus} SCOP: a.1.1.2 PDB: 1w92_A* 3gk9_A* 2vry_A* 3gkt_A* 3gln_A* 1oj6_A*
Probab=21.71 E-value=85 Score=19.46 Aligned_cols=26 Identities=4% Similarity=0.141 Sum_probs=20.5
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHHH
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVIE 78 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV~ 78 (85)
+|.....|+..+|.|..|..-.-+..
T Consensus 121 lg~~~t~e~~~AW~~~~~~v~~~m~~ 146 (151)
T 1q1f_A 121 LGPDFTPATRTAWSRLYGAVVQAMSR 146 (151)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHHHHG
T ss_pred hcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 67778889999999998877665554
No 23
>2aa1_B Hemoglobin beta-C chain; ROOT effect, cooperativity, antarctic FISH, oxygen storage/transport complex; HET: HEM; 1.80A {Trematomus newnesi} SCOP: a.1.1.2 PDB: 1xq5_B* 3bj1_B* 3bj2_B* 3bj3_B*
Probab=21.69 E-value=77 Score=20.31 Aligned_cols=25 Identities=12% Similarity=0.130 Sum_probs=19.7
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHH
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVI 77 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV 77 (85)
||.....|+..+|.|..+..-.-++
T Consensus 118 lg~~~t~e~~~AW~k~~~~va~~l~ 142 (146)
T 2aa1_B 118 FGSAFTGEVQAAFQKFMAVVVSSLG 142 (146)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHH
Confidence 6778888899999998887665554
No 24
>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase, BFR123, NESG, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides fragilis}
Probab=21.64 E-value=42 Score=25.06 Aligned_cols=18 Identities=28% Similarity=0.569 Sum_probs=16.0
Q ss_pred HHHhhHHHHHHhhccCCC
Q 034751 68 AVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 68 ~VD~tfG~lV~~LssR~w 85 (85)
.+|+.+|++++.|..+|+
T Consensus 285 ~~D~~iG~ll~~L~~~g~ 302 (491)
T 2qzu_A 285 GVDENVGRIIEALKQNNL 302 (491)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 599999999999998774
No 25
>3d1k_B Hemoglobin subunit beta-1/2; antarctic FISH hemoglobin, intermediate R/T quaternary structure, oxidation pathway, heme, iron, metal-binding; HET: HEM; 1.25A {Dusky notothen} SCOP: a.1.1.2 PDB: 1t1n_B* 1la6_B* 3nfe_B* 3ng6_B* 2h8f_B* 1pbx_B* 1s5x_B* 1s5y_B* 1hbh_B* 2h8d_B* 2peg_B* 3gkv_B* 3gqg_B*
Probab=21.24 E-value=80 Score=20.17 Aligned_cols=25 Identities=8% Similarity=0.058 Sum_probs=19.5
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHH
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVI 77 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV 77 (85)
||.....|+..+|.|..+..-.-++
T Consensus 118 lg~~~t~e~~~AW~k~~~~va~~l~ 142 (146)
T 3d1k_B 118 MGHAFTAETQGAFQKFLAAVVSALG 142 (146)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 6778888899999998887665554
No 26
>1xq5_A Hemoglobin alpha-1 chain; FISH hemoglobin, rapid oxidation, structural genomics, protein structure initiative, PSI, CESG; HET: HEM; 1.90A {Perca flavescens} SCOP: a.1.1.2 PDB: 3bj1_A* 3bj2_A* 3bj3_A* 3bcq_A*
Probab=20.49 E-value=88 Score=19.82 Aligned_cols=25 Identities=12% Similarity=0.154 Sum_probs=19.7
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHH
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVI 77 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV 77 (85)
+|.....|+..+|.|..+..-.-++
T Consensus 115 lg~~~t~e~~~AW~k~~~~va~~l~ 139 (143)
T 1xq5_A 115 FPKDFTPEVHISYDKFFSALARALA 139 (143)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 6777888999999998887665554
No 27
>1tu9_A Hypothetical protein PA3967; structural genomics, heme, hemoglobin, pseudomonas aeruginos PSI, protein structure initiative; HET: HEM; 1.20A {Pseudomonas aeruginosa} SCOP: a.1.1.2
Probab=20.44 E-value=90 Score=19.29 Aligned_cols=26 Identities=12% Similarity=0.299 Sum_probs=19.8
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHHH
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVIE 78 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV~ 78 (85)
+|.....|+..+|.|..+..-.-++.
T Consensus 105 lg~~~t~e~~~AW~~~~~~~a~~l~~ 130 (134)
T 1tu9_A 105 HDRDCDAETRDAWRDVMGRGIAVIKS 130 (134)
T ss_dssp HCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 57777888899999888776666554
No 28
>1fc3_A SPO0A; response regulator, signaling protein; 2.00A {Geobacillus stearothermophilus} SCOP: a.4.6.3 PDB: 1lq1_A
Probab=20.26 E-value=27 Score=23.38 Aligned_cols=42 Identities=21% Similarity=0.499 Sum_probs=26.6
Q ss_pred hhhhhcccCCCCCccccccccccchhhhhhhHHHHHHHHH----HHhhHHHHH
Q 034751 29 KCIYGSISDHQSHDEIKSQTREPIFARKTRSEFAHLWNKA----VDQTFGPVI 77 (85)
Q Consensus 29 r~Iy~Sisd~~~~~~~~~~~~~p~fgk~~r~e~a~~WNk~----VD~tfG~lV 77 (85)
|.||..||..- ..+...+ =|..|.-+..+|+++ +++.||-=+
T Consensus 48 K~LYp~IA~k~------~TT~s~V-EraIR~aIe~aw~~g~~~~l~~ifg~t~ 93 (120)
T 1fc3_A 48 KVLYPDIAKKY------NTTASRV-ERAIRHAIEVAWSRGNLESISSLFGYTV 93 (120)
T ss_dssp TTHHHHHHHHH------TSCHHHH-HHHHHHHHHHHHHSSCTTTTHHHHCHHH
T ss_pred HHHHHHHHHHh------CCCHHHH-HHHHHHHHHHHHHCCCHHHHHHHHCCCc
Confidence 56777777751 1111112 467788899999986 677887433
No 29
>2nrl_A Myoglobin; transport protein; HET: HEM; 0.91A {Thunnus atlanticus} PDB: 2nx0_A* 3qm5_A* 3qm6_A* 3qm7_A* 3qm8_A* 3qm9_A* 3qma_A* 1myt_A* 2nrm_A*
Probab=20.15 E-value=89 Score=19.90 Aligned_cols=29 Identities=3% Similarity=0.068 Sum_probs=22.2
Q ss_pred hhhHHHHHHHHHHHhhHHHHHHhhccCCC
Q 034751 57 TRSEFAHLWNKAVDQTFGPVIESFSSRGW 85 (85)
Q Consensus 57 ~r~e~a~~WNk~VD~tfG~lV~~LssR~w 85 (85)
...|+..+|.|..+..-.-+++-....||
T Consensus 117 ~t~e~~~AW~~~~~~v~~~l~~~y~~~~w 145 (147)
T 2nrl_A 117 LDAGGQTALRNVMGIIIADLEANYKELGF 145 (147)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 45677788999999888888776666666
No 30
>1v4x_B Hemoglobin beta chain; oxygen transport, heme, respiratory protein, erythrocyte, ROOT effect, SWIM bladder, oxygen storage/transport complex; HET: HEM; 1.60A {Thunnus thynnus} SCOP: a.1.1.2 PDB: 1v4u_B* 1v4w_B*
Probab=20.15 E-value=87 Score=19.98 Aligned_cols=25 Identities=8% Similarity=-0.067 Sum_probs=19.3
Q ss_pred hhhhhhhHHHHHHHHHHHhhHHHHH
Q 034751 53 FARKTRSEFAHLWNKAVDQTFGPVI 77 (85)
Q Consensus 53 fgk~~r~e~a~~WNk~VD~tfG~lV 77 (85)
||.....|+..+|.|..+..-.-++
T Consensus 118 lg~~~t~e~~~AW~k~~~~va~~l~ 142 (146)
T 1v4x_B 118 LGDAFTVETQCAFQKFLAVVVFALG 142 (146)
T ss_dssp HGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 6777888889999998887655544
Done!