Query 034753
Match_columns 85
No_of_seqs 61 out of 63
Neff 3.5
Searched_HMMs 13730
Date Mon Mar 25 09:44:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034753.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034753hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lrza1 a.2.7.4 (A:245-309) Me 70.6 2.8 0.0002 24.3 3.8 27 52-78 5-31 (65)
2 d1lvfa_ a.47.2.1 (A:) Syntaxin 70.0 1.4 0.0001 26.9 2.5 32 53-84 45-76 (106)
3 d1cxzb_ a.2.6.1 (B:) Protein k 68.8 3.8 0.00028 25.2 4.4 26 48-73 61-86 (86)
4 d1r8da_ a.6.1.3 (A:) Multidrug 64.5 11 0.00077 22.0 6.0 43 34-76 62-108 (109)
5 d1ydxa2 d.287.1.2 (A:194-374) 57.9 13 0.00092 22.0 5.3 30 35-68 142-171 (181)
6 d1t72a_ a.7.12.1 (A:) Phosphat 55.6 20 0.0015 22.4 7.2 64 5-68 1-65 (215)
7 d1q08a_ a.6.1.3 (A:) Transcrip 54.9 11 0.0008 22.0 4.6 31 48-78 44-74 (94)
8 d1ivsa1 a.2.7.3 (A:797-862) Va 54.1 6.9 0.0005 21.6 3.3 23 47-69 43-65 (66)
9 d1q06a_ a.6.1.3 (A:) Transcrip 54.0 18 0.0013 21.4 5.9 31 48-78 84-114 (127)
10 d1seta1 a.2.7.1 (A:1-110) Sery 53.7 12 0.00086 22.1 4.6 33 49-81 70-106 (110)
11 d1fxka_ a.2.5.1 (A:) Prefoldin 53.1 9.5 0.00069 22.6 4.1 23 50-72 72-94 (107)
12 d3b8oa1 d.58.60.1 (A:55-319) L 52.4 29 0.0021 23.6 7.1 45 19-66 119-163 (265)
13 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 51.7 13 0.00091 21.9 4.3 29 47-75 37-65 (67)
14 d1ydxa1 d.287.1.2 (A:1-193) Bi 51.4 19 0.0014 21.3 5.3 33 34-70 146-178 (193)
15 d1eqfa1 a.29.2.1 (A:1359-1497) 51.0 15 0.0011 22.6 5.0 26 42-67 113-138 (139)
16 d1ivsa1 a.2.7.3 (A:797-862) Va 50.8 10 0.00073 20.8 3.7 24 52-75 6-29 (66)
17 d1tqga_ a.24.10.3 (A:) Chemota 44.5 21 0.0015 20.3 4.6 29 38-66 4-32 (105)
18 d1yaca_ c.33.1.3 (A:) YcaC {Es 42.3 7.1 0.00052 25.2 2.4 29 1-30 154-183 (204)
19 d1yf2a2 d.287.1.2 (A:221-425) 41.7 29 0.0021 20.1 5.3 11 35-45 162-172 (205)
20 d1q06a_ a.6.1.3 (A:) Transcrip 40.6 15 0.0011 21.8 3.6 42 33-74 59-103 (127)
21 d1r8ea1 a.6.1.3 (A:3-120) Tran 38.7 33 0.0024 19.8 5.5 35 46-80 80-117 (118)
22 d2rfra1 d.17.4.28 (A:1-153) Un 37.7 16 0.0011 21.4 3.3 19 52-70 4-22 (153)
23 d3b8ma1 d.58.60.1 (A:64-330) E 37.2 54 0.0039 21.9 7.1 40 24-65 126-165 (267)
24 d1vp7a_ a.7.13.1 (A:) Exonucle 36.1 30 0.0022 19.5 4.3 22 44-65 42-63 (68)
25 d1fxka_ a.2.5.1 (A:) Prefoldin 35.5 36 0.0026 19.8 4.8 27 49-75 78-104 (107)
26 d1nkpa_ a.38.1.1 (A:) Myc prot 33.7 37 0.0027 19.0 6.0 24 51-74 60-83 (88)
27 d3b8pa1 d.58.60.1 (A:54-292) C 33.1 63 0.0046 21.5 7.1 42 24-67 96-137 (239)
28 d2gtsa1 a.25.5.1 (A:4-80) Hypo 30.2 50 0.0036 19.4 5.6 33 24-59 44-76 (77)
29 d3bi1a1 a.48.2.1 (A:594-750) G 29.3 35 0.0026 20.8 4.1 19 48-66 64-82 (157)
30 d1umna_ a.25.1.1 (A:) Dodecame 28.5 55 0.004 19.4 8.0 59 20-78 87-150 (151)
31 d1hs7a_ a.47.2.1 (A:) Vam3p N- 28.2 40 0.0029 20.8 4.1 28 51-78 4-31 (97)
32 d1ud0a_ a.8.4.1 (A:) DnaK {Rat 27.8 48 0.0035 18.5 7.7 55 24-81 28-83 (84)
33 d1nf4a_ a.25.1.1 (A:) Bacterio 26.9 62 0.0045 19.4 6.4 44 37-80 118-162 (169)
34 d1wa8b1 a.25.3.1 (B:602-695) E 25.2 54 0.0039 18.2 5.0 28 43-70 12-39 (94)
35 d1xwma_ a.7.12.1 (A:) Phosphat 24.2 74 0.0054 19.4 5.2 43 25-67 15-57 (212)
36 d1rp3a1 a.4.13.1 (A:87-163) Si 23.5 53 0.0039 17.7 3.8 23 56-78 6-28 (77)
37 d1wa8a1 a.25.3.1 (A:1-99) ESAT 23.4 58 0.0042 17.9 5.0 26 45-70 14-39 (99)
38 d1wu9a1 a.245.1.1 (A:191-249) 23.1 50 0.0036 18.4 3.6 20 52-71 3-22 (59)
39 d1grja1 a.2.1.1 (A:2-79) GreA 23.0 48 0.0035 19.1 3.6 21 47-67 49-69 (78)
40 d1i5na_ a.24.10.3 (A:) Chemota 22.8 14 0.001 21.7 1.1 28 37-64 2-29 (128)
41 d1lrza1 a.2.7.4 (A:245-309) Me 22.2 65 0.0047 18.0 7.5 44 24-67 2-54 (65)
42 d1aw9a1 a.45.1.1 (A:83-217) Cl 21.4 48 0.0035 18.9 3.4 23 54-76 50-72 (135)
43 d1u7la_ e.57.1.1 (A:) Vacuolar 20.0 1.2E+02 0.0087 22.2 6.1 45 21-65 112-161 (388)
No 1
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=70.62 E-value=2.8 Score=24.29 Aligned_cols=27 Identities=22% Similarity=0.268 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCC
Q 034753 52 LALLNEKLDTLERRLELLEVQVGTASA 78 (85)
Q Consensus 52 La~lneKL~~LEr~le~LEA~v~s~~~ 78 (85)
|..|+.+...|+.+|.-+++.+..-|.
T Consensus 5 l~~L~~~~~~L~~~i~k~~~~leknP~ 31 (65)
T d1lrza1 5 IKELNEERDILNKDLNKALKDIEKRPE 31 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 344555555566666655555555544
No 2
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=69.98 E-value=1.4 Score=26.91 Aligned_cols=32 Identities=31% Similarity=0.459 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCcc
Q 034753 53 ALLNEKLDTLERRLELLEVQVGTASANPHLFT 84 (85)
Q Consensus 53 a~lneKL~~LEr~le~LEA~v~s~~~~p~~~~ 84 (85)
..|..-|..+|.+|+-||.-|.-+..+|+-|.
T Consensus 45 ~eL~~~l~siewdL~dLe~av~~ve~np~kf~ 76 (106)
T d1lvfa_ 45 NELRNNLRSIEWDLEDLDETISIVEANPRKFN 76 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSGGGGT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhCHHhcC
Confidence 45667788899999999999998888888774
No 3
>d1cxzb_ a.2.6.1 (B:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.76 E-value=3.8 Score=25.20 Aligned_cols=26 Identities=27% Similarity=0.318 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 034753 48 TKSKLALLNEKLDTLERRLELLEVQV 73 (85)
Q Consensus 48 cr~KLa~lneKL~~LEr~le~LEA~v 73 (85)
.+.=|...|.||+.|-..|.-|+++|
T Consensus 61 V~~eL~~sN~kL~~L~~eL~eLna~i 86 (86)
T d1cxzb_ 61 VELLLRGSSRRLDLLHQQLQELHAHV 86 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 44456666677777777777666653
No 4
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=64.49 E-value=11 Score=21.95 Aligned_cols=43 Identities=14% Similarity=0.228 Sum_probs=29.0
Q ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 034753 34 VRRLFEFLVQ----FEATTKSKLALLNEKLDTLERRLELLEVQVGTA 76 (85)
Q Consensus 34 I~~i~~FLN~----Fd~scr~KLa~lneKL~~LEr~le~LEA~v~s~ 76 (85)
|..|-++|+. -...++...+.+.+++..|+..+..|+..+.++
T Consensus 62 l~eI~~~l~~~~~~~~~~l~~~~~~l~~~~~~l~~~~~~l~~~l~~i 108 (109)
T d1r8da_ 62 LDEIKEMLDHPNFDRKAALQSQKEILMKKKQRMDEMIQTIDRTLLSV 108 (109)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4444455543 233456667778888888888888888887764
No 5
>d1ydxa2 d.287.1.2 (A:194-374) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=57.88 E-value=13 Score=22.02 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 35 RRLFEFLVQFEATTKSKLALLNEKLDTLERRLEL 68 (85)
Q Consensus 35 ~~i~~FLN~Fd~scr~KLa~lneKL~~LEr~le~ 68 (85)
++|+++|..+|. ++..++++++.|+..-..
T Consensus 142 ~~I~~~l~~~d~----~i~~~~~~i~~l~~lk~~ 171 (181)
T d1ydxa2 142 RKAGKIVFLLDQ----KLDQYKKELSSLTVIRDT 171 (181)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 467777776664 445555555555554443
No 6
>d1t72a_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Aquifex aeolicus [TaxId: 63363]}
Probab=55.60 E-value=20 Score=22.37 Aligned_cols=64 Identities=13% Similarity=0.119 Sum_probs=41.6
Q ss_pred cCCcchhHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 5 GGITNAVNVGIAVQA-DWENREFISHISLNVRRLFEFLVQFEATTKSKLALLNEKLDTLERRLEL 68 (85)
Q Consensus 5 ~~~~~~~~v~~~iq~-DW~nRE~ie~Is~~I~~i~~FLN~Fd~scr~KLa~lneKL~~LEr~le~ 68 (85)
||-|+...+-..+.+ .=+=-++...+..++....+.|...|..--.++-..++++..++..++.
T Consensus 1 ~~~~~~~~~~~~L~~l~~~l~~M~~~v~~~l~~~~~al~~~D~~~a~~v~~~d~~id~l~~~I~~ 65 (215)
T d1t72a_ 1 GGGGGGMKLFKELEETKEQVIKMAKLVQEAIDKATEALNKQNVELAEEVIKGDDTIDLLEVDIER 65 (215)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhHHHHHHHHHHHHH
Confidence 444555555554432 2223345556667777778888888877777788888888888887763
No 7
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=54.86 E-value=11 Score=21.98 Aligned_cols=31 Identities=10% Similarity=0.168 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 034753 48 TKSKLALLNEKLDTLERRLELLEVQVGTASA 78 (85)
Q Consensus 48 cr~KLa~lneKL~~LEr~le~LEA~v~s~~~ 78 (85)
...||+.+++|+..|.+--..|+.-+...++
T Consensus 44 ~~~kl~~i~~kI~~L~~l~~~L~~l~~~c~~ 74 (94)
T d1q08a_ 44 VQERLQEVEARIAELQSMQRSLQRLNDACCG 74 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4567888888877777766777766665544
No 8
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=54.09 E-value=6.9 Score=21.55 Aligned_cols=23 Identities=13% Similarity=0.221 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 034753 47 TTKSKLALLNEKLDTLERRLELL 69 (85)
Q Consensus 47 scr~KLa~lneKL~~LEr~le~L 69 (85)
..+.||+.++.++..|+.+|..|
T Consensus 43 ~~k~kl~~~~~~~~~l~~~l~~L 65 (66)
T d1ivsa1 43 AEEARLKENLEQAERIREALSQI 65 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 56788888888888888777643
No 9
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=53.96 E-value=18 Score=21.38 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 034753 48 TKSKLALLNEKLDTLERRLELLEVQVGTASA 78 (85)
Q Consensus 48 cr~KLa~lneKL~~LEr~le~LEA~v~s~~~ 78 (85)
-..+++.+++++..+.+.++.|+.-+..+++
T Consensus 84 l~~~~~~l~~~i~~l~~~~~~l~~l~~~~~~ 114 (127)
T d1q06a_ 84 TLEKVAEIERHIEELQSMRDQLLALANACPG 114 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3457778888888888888888887777664
No 10
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=53.75 E-value=12 Score=22.08 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc----ccCCCCC
Q 034753 49 KSKLALLNEKLDTLERRLELLEVQVG----TASANPH 81 (85)
Q Consensus 49 r~KLa~lneKL~~LEr~le~LEA~v~----s~~~~p~ 81 (85)
..+...+.+++..||.++..+|.++. .+|+-|+
T Consensus 70 ~~~~k~lk~~i~~le~~~~~~~~~l~~~ll~iPNi~~ 106 (110)
T d1seta1 70 IARGKALGEEAKRLEEALREKEARLEALLLQVPLPPW 106 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 45667778888888888887776654 4666554
No 11
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=53.08 E-value=9.5 Score=22.59 Aligned_cols=23 Identities=30% Similarity=0.316 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 034753 50 SKLALLNEKLDTLERRLELLEVQ 72 (85)
Q Consensus 50 ~KLa~lneKL~~LEr~le~LEA~ 72 (85)
.|+..++.++..|+.++..|+.+
T Consensus 72 ~~~e~l~~~i~~l~~q~~~l~~~ 94 (107)
T d1fxka_ 72 EKLETLQLREKTIERQEERVMKK 94 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444443
No 12
>d3b8oa1 d.58.60.1 (A:55-319) Lipopolysaccharide biosynthesis protein WzzE {Escherichia coli [TaxId: 562]}
Probab=52.41 E-value=29 Score=23.59 Aligned_cols=45 Identities=4% Similarity=0.107 Sum_probs=35.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 19 ADWENREFISHISLNVRRLFEFLVQFEATTKSKLALLNEKLDTLERRL 66 (85)
Q Consensus 19 ~DW~nRE~ie~Is~~I~~i~~FLN~Fd~scr~KLa~lneKL~~LEr~l 66 (85)
++|=+ +||.+++..+.+ +..+.|...-..|+..|.+++..+|...
T Consensus 119 ~~lL~-~YI~~v~~~~~~--~l~~~l~~~i~~~~~~l~~~~~~~~~~a 163 (265)
T d3b8oa1 119 NNLLR-QYVAFASQRAAS--HLNDELKGAWAARTIQMKAQVKRQEEVA 163 (265)
T ss_dssp HHHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34544 899999988877 6778888888888888888887776543
No 13
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.69 E-value=13 Score=21.95 Aligned_cols=29 Identities=14% Similarity=0.258 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 034753 47 TTKSKLALLNEKLDTLERRLELLEVQVGT 75 (85)
Q Consensus 47 scr~KLa~lneKL~~LEr~le~LEA~v~s 75 (85)
-|+..|-+|++.|..=-=+|-||.+-+++
T Consensus 37 rCk~~irrLeqel~~ErF~~iYLQt~LA~ 65 (67)
T d1k1fa_ 37 RAKASIRRLEQEVNQERFRMIYLQTLLAK 65 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 69999999999999877889999998875
No 14
>d1ydxa1 d.287.1.2 (A:1-193) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=51.43 E-value=19 Score=21.28 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 34 VRRLFEFLVQFEATTKSKLALLNEKLDTLERRLELLE 70 (85)
Q Consensus 34 I~~i~~FLN~Fd~scr~KLa~lneKL~~LEr~le~LE 70 (85)
-++|+++|..+|. ++..++++++.|+...+.|=
T Consensus 146 Q~~I~~~l~~ld~----~i~~~~~~i~~l~~~~~~ll 178 (193)
T d1ydxa1 146 QHAIANTLSVFDE----RLENLASLIEINRKLRDEYA 178 (193)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Confidence 3466777776663 44556666666665555443
No 15
>d1eqfa1 a.29.2.1 (A:1359-1497) TAFII250 double bromodomain module {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.97 E-value=15 Score=22.59 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 42 VQFEATTKSKLALLNEKLDTLERRLE 67 (85)
Q Consensus 42 N~Fd~scr~KLa~lneKL~~LEr~le 67 (85)
..+..-|+.++..+.++|..+|+.++
T Consensus 113 ~~L~~~~~~~~~~~~~~~~~~e~~in 138 (139)
T d1eqfa1 113 QSMLDLCDEKLKEKEDKLARLEKAIN 138 (139)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 34455677888888888888887663
No 16
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=50.85 E-value=10 Score=20.82 Aligned_cols=24 Identities=13% Similarity=0.059 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Q 034753 52 LALLNEKLDTLERRLELLEVQVGT 75 (85)
Q Consensus 52 La~lneKL~~LEr~le~LEA~v~s 75 (85)
+++|+-+|..++..++.++.+++.
T Consensus 6 ~~RL~K~l~kl~~~i~~~~~kL~N 29 (66)
T d1ivsa1 6 RRRQEKRLKELLALAERSQRKLAS 29 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCC
Confidence 456677777777777777777653
No 17
>d1tqga_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Thermotoga maritima [TaxId: 2336]}
Probab=44.50 E-value=21 Score=20.27 Aligned_cols=29 Identities=38% Similarity=0.433 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 38 FEFLVQFEATTKSKLALLNEKLDTLERRL 66 (85)
Q Consensus 38 ~~FLN~Fd~scr~KLa~lneKL~~LEr~l 66 (85)
.+||.-|-.-|+..|..+++-|..+|+..
T Consensus 4 ~E~l~~Fl~Ea~e~l~~l~~~l~~le~~~ 32 (105)
T d1tqga_ 4 MEYLGVFVDETKEYLQNLNDTLLELEKNP 32 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 47888888888888888888888877643
No 18
>d1yaca_ c.33.1.3 (A:) YcaC {Escherichia coli [TaxId: 562]}
Probab=42.29 E-value=7.1 Score=25.25 Aligned_cols=29 Identities=24% Similarity=0.483 Sum_probs=21.5
Q ss_pred CccccC-CcchhHHHHHHHhhhhHHHHHHHH
Q 034753 1 MARAGG-ITNAVNVGIAVQADWENREFISHI 30 (85)
Q Consensus 1 ~~~~~~-~~~~~~v~~~iq~DW~nRE~ie~I 30 (85)
|+.+|+ |.+++.|--+++.||.+- |-+..
T Consensus 154 m~~~g~~i~t~e~v~~el~rd~~~~-~~~~~ 183 (204)
T d1yaca_ 154 MSQAGAQLMTWFGVACELHRDWRND-IAGLA 183 (204)
T ss_dssp HHHHTCEEECHHHHHHHHHCCGGGC-HHHHH
T ss_pred HHHCCCEEecHHHHHHHHHhhcccc-hHHHH
Confidence 345555 889999999999999864 55543
No 19
>d1yf2a2 d.287.1.2 (A:221-425) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=41.74 E-value=29 Score=20.08 Aligned_cols=11 Identities=9% Similarity=0.392 Sum_probs=6.6
Q ss_pred HHHHHHHHHHH
Q 034753 35 RRLFEFLVQFE 45 (85)
Q Consensus 35 ~~i~~FLN~Fd 45 (85)
++|++||.+.+
T Consensus 162 ~~I~~~l~~id 172 (205)
T d1yf2a2 162 KQIAKILSSVD 172 (205)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45666666554
No 20
>d1q06a_ a.6.1.3 (A:) Transcriptional regulator CueR {Escherichia coli [TaxId: 562]}
Probab=40.58 E-value=15 Score=21.83 Aligned_cols=42 Identities=21% Similarity=0.206 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 034753 33 NVRRLFEFLVQFE---ATTKSKLALLNEKLDTLERRLELLEVQVG 74 (85)
Q Consensus 33 ~I~~i~~FLN~Fd---~scr~KLa~lneKL~~LEr~le~LEA~v~ 74 (85)
++..|-+++.-++ ..|......+.+++..||++++-++....
T Consensus 59 sl~eI~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~ 103 (127)
T d1q06a_ 59 NLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRD 103 (127)
T ss_dssp CHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555554443 35555666778888888888887776543
No 21
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=38.66 E-value=33 Score=19.84 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHhhcccCCCC
Q 034753 46 ATTKSKLALLNEKLDT---LERRLELLEVQVGTASANP 80 (85)
Q Consensus 46 ~scr~KLa~lneKL~~---LEr~le~LEA~v~s~~~~p 80 (85)
..+..+...+++++.. +++.++.++..+......|
T Consensus 80 ~~l~~~~~~l~~~i~~l~~~~~~l~~~~~~l~~~~e~p 117 (118)
T d1r8ea1 80 AFYTEQERQIREKLDFLSALEQTISLVKKRMKRQMEYP 117 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3344445555554433 3344555555555555544
No 22
>d2rfra1 d.17.4.28 (A:1-153) Uncharacterized protein Saro3722 {Novosphingobium aromaticivorans [TaxId: 48935]}
Probab=37.74 E-value=16 Score=21.41 Aligned_cols=19 Identities=42% Similarity=0.482 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 034753 52 LALLNEKLDTLERRLELLE 70 (85)
Q Consensus 52 La~lneKL~~LEr~le~LE 70 (85)
+++|.+||+.||.+.++.+
T Consensus 4 ~~~l~~rl~~led~~aI~~ 22 (153)
T d2rfra1 4 LTNLAARLRLLEDREEIRE 22 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5667777777777766544
No 23
>d3b8ma1 d.58.60.1 (A:64-330) Enterochelin transport protein FepE {Escherichia coli [TaxId: 562]}
Probab=37.20 E-value=54 Score=21.93 Aligned_cols=40 Identities=23% Similarity=0.187 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 24 REFISHISLNVRRLFEFLVQFEATTKSKLALLNEKLDTLERR 65 (85)
Q Consensus 24 RE~ie~Is~~I~~i~~FLN~Fd~scr~KLa~lneKL~~LEr~ 65 (85)
++||.+|+..+.+ +..+.|...-..|+..++++++.+|..
T Consensus 126 ~~YI~~v~~~v~~--~l~~~~~~~i~~~~~~l~~~~~~~~~~ 165 (267)
T d3b8ma1 126 SGYIDYISALVVK--ESIENVRNKLEIKTQFEKEKLAQDRIK 165 (267)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788888887765 344667777777888888777766543
No 24
>d1vp7a_ a.7.13.1 (A:) Exonuclease VII small subunit XseB {Bordetella pertussis [TaxId: 520]}
Probab=36.13 E-value=30 Score=19.51 Aligned_cols=22 Identities=18% Similarity=0.333 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 034753 44 FEATTKSKLALLNEKLDTLERR 65 (85)
Q Consensus 44 Fd~scr~KLa~lneKL~~LEr~ 65 (85)
.-..|+.+|...+.|++.|...
T Consensus 42 L~~~C~~~L~~ae~ki~~l~~~ 63 (68)
T d1vp7a_ 42 LARVCQDRLAQAEQQVKVLEGD 63 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcc
Confidence 3446777777777777666543
No 25
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=35.49 E-value=36 Score=19.82 Aligned_cols=27 Identities=7% Similarity=0.268 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 034753 49 KSKLALLNEKLDTLERRLELLEVQVGT 75 (85)
Q Consensus 49 r~KLa~lneKL~~LEr~le~LEA~v~s 75 (85)
+.++.+|+..+..++.+++-+..++.+
T Consensus 78 ~~~i~~l~~q~~~l~~~l~~~~~~l~~ 104 (107)
T d1fxka_ 78 QLREKTIERQEERVMKKLQEMQVNIQE 104 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567777888888888888877777654
No 26
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.68 E-value=37 Score=19.05 Aligned_cols=24 Identities=25% Similarity=0.232 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Q 034753 51 KLALLNEKLDTLERRLELLEVQVG 74 (85)
Q Consensus 51 KLa~lneKL~~LEr~le~LEA~v~ 74 (85)
.+..+.+++..|.++.+.|..+++
T Consensus 60 ~~~~l~~~~~~l~~~~~~L~~~l~ 83 (88)
T d1nkpa_ 60 EEQKLISEEDLLRKRREQLKHKLE 83 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555566666666666666554
No 27
>d3b8pa1 d.58.60.1 (A:54-292) Chain length determinant protein WzzB {Salmonella typhimurium [TaxId: 90371]}
Probab=33.06 E-value=63 Score=21.47 Aligned_cols=42 Identities=24% Similarity=0.344 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 24 REFISHISLNVRRLFEFLVQFEATTKSKLALLNEKLDTLERRLE 67 (85)
Q Consensus 24 RE~ie~Is~~I~~i~~FLN~Fd~scr~KLa~lneKL~~LEr~le 67 (85)
++||.+|+..+.+ +.++.+...-..|...|.+++..+|....
T Consensus 96 ~~YI~fv~~~~~~--~l~~~i~~~i~~~~~~l~~~~~~~~~~ak 137 (239)
T d3b8pa1 96 AEYIQQVDEEVAK--ELEVDLKDNITLQTKTLQESLETQEVVAQ 137 (239)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999988754 56688888888888888888888776644
No 28
>d2gtsa1 a.25.5.1 (A:4-80) Hypothetical protein HP0062 {Helicobacter pylori [TaxId: 210]}
Probab=30.15 E-value=50 Score=19.41 Aligned_cols=33 Identities=24% Similarity=0.511 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 24 REFISHISLNVRRLFEFLVQFEATTKSKLALLNEKL 59 (85)
Q Consensus 24 RE~ie~Is~~I~~i~~FLN~Fd~scr~KLa~lneKL 59 (85)
|+--+.+-.|+++++ |.||..+...+|=|.+|+
T Consensus 44 rd~fsevldnlk~tf---nefdea~qeqiawlkeri 76 (77)
T d2gtsa1 44 RDKFSEVLDNLKSTF---NEFDEAAQEQIAWLKERI 76 (77)
T ss_dssp HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHc
Confidence 454555667777765 799999999998888876
No 29
>d3bi1a1 a.48.2.1 (A:594-750) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.31 E-value=35 Score=20.82 Aligned_cols=19 Identities=32% Similarity=0.455 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 034753 48 TKSKLALLNEKLDTLERRL 66 (85)
Q Consensus 48 cr~KLa~lneKL~~LEr~l 66 (85)
...++-.+|.||..+||..
T Consensus 64 ~~~~~r~~N~~L~~~Er~F 82 (157)
T d3bi1a1 64 NPIVLRMMNDQLMFLERAF 82 (157)
T ss_dssp CHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 3446777899999888864
No 30
>d1umna_ a.25.1.1 (A:) Dodecameric ferritin homolog {Streptococcus suis [TaxId: 1307]}
Probab=28.55 E-value=55 Score=19.41 Aligned_cols=59 Identities=14% Similarity=0.193 Sum_probs=49.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhcccCC
Q 034753 20 DWENREFISHISLNVRRLFEFLVQFEATTKSK-----LALLNEKLDTLERRLELLEVQVGTASA 78 (85)
Q Consensus 20 DW~nRE~ie~Is~~I~~i~~FLN~Fd~scr~K-----La~lneKL~~LEr~le~LEA~v~s~~~ 78 (85)
.+.-+++++.+-.....+..++.+.-.-|+.= -.-+.+.++..|+.+=.|+|.+.+.|.
T Consensus 87 ~~~~~~ml~~~~~~~~~~~~~~~~~~~~a~~~~D~~t~dll~~i~~~~Ek~~WmL~a~L~~~p~ 150 (151)
T d1umna_ 87 NVTIEEQLARVVEVFRYLAALFQKGFDVSDEEGDSVTNDIFNVAKASIEKHIWMLQAELGQAPK 150 (151)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 47788999999999999999998887666551 246788899999999999999999875
No 31
>d1hs7a_ a.47.2.1 (A:) Vam3p N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.23 E-value=40 Score=20.85 Aligned_cols=28 Identities=18% Similarity=0.260 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 034753 51 KLALLNEKLDTLERRLELLEVQVGTASA 78 (85)
Q Consensus 51 KLa~lneKL~~LEr~le~LEA~v~s~~~ 78 (85)
+-..++..|..||.++.-||-++.++.+
T Consensus 4 ~~~ev~~ll~tL~~~i~lLkk~~~kiGT 31 (97)
T d1hs7a_ 4 KTKELSNLIETFAEQSRVLEKECTKIGS 31 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4456788888888888888888877654
No 32
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=27.77 E-value=48 Score=18.48 Aligned_cols=55 Identities=15% Similarity=0.168 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cccCCCCC
Q 034753 24 REFISHISLNVRRLFEFLVQFEATTKSKLALLNEKLDTLERRLELLEVQV-GTASANPH 81 (85)
Q Consensus 24 RE~ie~Is~~I~~i~~FLN~Fd~scr~KLa~lneKL~~LEr~le~LEA~v-~s~~~~p~ 81 (85)
.+=.+.|...+..+.++|.. +..+. ...+++|+..||..+.=+=.++ ....+.|.
T Consensus 28 ~~dk~~i~~~l~e~~~WL~~-n~~a~--~ee~~~k~~eLe~~~~PI~~k~y~~~g~~P~ 83 (84)
T d1ud0a_ 28 DEDKQKILDKCNEIISWLDK-NQTAE--KEEFEHQQKELEKVCNPIITKLYQSAGGMPG 83 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHH--HHHHHHHTHHHHHHHHHHHHHHTTSSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCCCC--HHHHHHHHHHHHHHHHHHHHHHHccCCCCCC
Confidence 45567888888999999854 22332 3789999999999988777776 44555553
No 33
>d1nf4a_ a.25.1.1 (A:) Bacterioferritin (cytochrome b1) {Desulfovibrio desulfuricans [TaxId: 876]}
Probab=26.89 E-value=62 Score=19.42 Aligned_cols=44 Identities=11% Similarity=0.101 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcccCCCC
Q 034753 37 LFEFLVQFEATTKSKLALLNEKLDTLER-RLELLEVQVGTASANP 80 (85)
Q Consensus 37 i~~FLN~Fd~scr~KLa~lneKL~~LEr-~le~LEA~v~s~~~~p 80 (85)
+.+||..|-.--+.-...++..|+.+|+ .-.||-...+..+.+|
T Consensus 118 t~~~l~~il~eE~~H~~~~e~~l~~i~~~G~~yl~~~~~~~~~~~ 162 (169)
T d1nf4a_ 118 TARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTG 162 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTTCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCCCCC
Confidence 7788888888877778888888888887 4446654444444433
No 34
>d1wa8b1 a.25.3.1 (B:602-695) ESAT-6, EsxA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=25.24 E-value=54 Score=18.19 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 43 QFEATTKSKLALLNEKLDTLERRLELLE 70 (85)
Q Consensus 43 ~Fd~scr~KLa~lneKL~~LEr~le~LE 70 (85)
.+....+..-..++..|..|+..++.|-
T Consensus 12 ~~a~~i~~~~~~i~~~l~~L~~~~~~l~ 39 (94)
T d1wa8b1 12 AAASAIQGNVTSIHSLLDEGKQSLTKLA 39 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555566666666666666553
No 35
>d1xwma_ a.7.12.1 (A:) Phosphate transport system protein PhoU {Bacillus stearothermophilus [TaxId: 1422]}
Probab=24.18 E-value=74 Score=19.41 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 25 EFISHISLNVRRLFEFLVQFEATTKSKLALLNEKLDTLERRLE 67 (85)
Q Consensus 25 E~ie~Is~~I~~i~~FLN~Fd~scr~KLa~lneKL~~LEr~le 67 (85)
++...+...+....+.|...|..--.++-..++++..+++.++
T Consensus 15 ~M~~~v~~~l~~a~~al~~~D~~~a~~v~~~d~~id~l~~~I~ 57 (212)
T d1xwma_ 15 EMGRLTEVALQQAIEAFQTQNANLAMAVIDGDGSIDALEEEVN 57 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHhhHHHHHHHHHHH
Confidence 4556666777777777877777776777777888888877775
No 36
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=23.45 E-value=53 Score=17.71 Aligned_cols=23 Identities=22% Similarity=0.342 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHhhcccCC
Q 034753 56 NEKLDTLERRLELLEVQVGTASA 78 (85)
Q Consensus 56 neKL~~LEr~le~LEA~v~s~~~ 78 (85)
-+|..++++....|+.++...|+
T Consensus 6 r~~~~ki~~a~~~L~~~lGR~Pt 28 (77)
T d1rp3a1 6 REKERRIKEVVEKLKEKLGREPT 28 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHCcCCC
Confidence 36777888888888888887765
No 37
>d1wa8a1 a.25.3.1 (A:1-99) ESAT-6 like protein EsxB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.43 E-value=58 Score=17.93 Aligned_cols=26 Identities=15% Similarity=0.161 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 45 EATTKSKLALLNEKLDTLERRLELLE 70 (85)
Q Consensus 45 d~scr~KLa~lneKL~~LEr~le~LE 70 (85)
....+..-..++..|+.|...++.|.
T Consensus 14 A~~~~~~~~~l~~~l~~l~~~v~~l~ 39 (99)
T d1wa8a1 14 AGNFERISGDLKTQIDQVESTAGSLQ 39 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444445555555555554443
No 38
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.08 E-value=50 Score=18.38 Aligned_cols=20 Identities=30% Similarity=0.293 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 034753 52 LALLNEKLDTLERRLELLEV 71 (85)
Q Consensus 52 La~lneKL~~LEr~le~LEA 71 (85)
++.|++++..|.-+++.||.
T Consensus 3 ~~~L~~ei~elk~~v~~lEk 22 (59)
T d1wu9a1 3 AAELMQQVNVLKLTVEDLEK 22 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666666554
No 39
>d1grja1 a.2.1.1 (A:2-79) GreA transcript cleavage protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.96 E-value=48 Score=19.08 Aligned_cols=21 Identities=10% Similarity=0.379 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 034753 47 TTKSKLALLNEKLDTLERRLE 67 (85)
Q Consensus 47 scr~KLa~lneKL~~LEr~le 67 (85)
.++.+++.++.|+..||..|.
T Consensus 49 aAKe~q~~~e~RI~eLe~~L~ 69 (78)
T d1grja1 49 AAREQQGFCEGRIKDIEAKLS 69 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 345555555555555555443
No 40
>d1i5na_ a.24.10.3 (A:) Chemotaxis protein CheA P1 domain {Salmonella typhimurium [TaxId: 90371]}
Probab=22.77 E-value=14 Score=21.72 Aligned_cols=28 Identities=21% Similarity=0.236 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 034753 37 LFEFLVQFEATTKSKLALLNEKLDTLER 64 (85)
Q Consensus 37 i~~FLN~Fd~scr~KLa~lneKL~~LEr 64 (85)
+.+|+.-|-.-|...|..+++-|..||+
T Consensus 2 ~~e~~~~F~~Ea~e~l~~l~~~l~~le~ 29 (128)
T d1i5na_ 2 ISDFYQTFFDEADELLADMEQHLLDLVP 29 (128)
T ss_dssp GGGGHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467788877777777777777666654
No 41
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=22.23 E-value=65 Score=18.01 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHH
Q 034753 24 REFISHISLNVRRLFEFLVQFEATTK---------SKLALLNEKLDTLERRLE 67 (85)
Q Consensus 24 RE~ie~Is~~I~~i~~FLN~Fd~scr---------~KLa~lneKL~~LEr~le 67 (85)
+||+..+......+-.=|+.-+..++ +|+..|+..+..++++++
T Consensus 2 ~eYl~~L~~~~~~L~~~i~k~~~~leknP~skK~~nk~~el~~Q~~s~~~ki~ 54 (65)
T d1lrza1 2 DEYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIE 54 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 47888887777777777777666554 456666666666666655
No 42
>d1aw9a1 a.45.1.1 (A:83-217) Class phi GST {Maize (Zea mays), type III [TaxId: 4577]}
Probab=21.44 E-value=48 Score=18.88 Aligned_cols=23 Identities=13% Similarity=0.421 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccc
Q 034753 54 LLNEKLDTLERRLELLEVQVGTA 76 (85)
Q Consensus 54 ~lneKL~~LEr~le~LEA~v~s~ 76 (85)
.+++....+.+.+++||..++.-
T Consensus 50 ~~~~~~~~l~~~l~~le~~L~~~ 72 (135)
T d1aw9a1 50 VVDKHAEQLAKVLDVYEAHLARN 72 (135)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHccC
Confidence 45667778888999999888653
No 43
>d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.04 E-value=1.2e+02 Score=22.18 Aligned_cols=45 Identities=24% Similarity=0.365 Sum_probs=31.0
Q ss_pred hhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Q 034753 21 WENREF--ISHISLNVRRLFEFLVQFEATTKSKLALLNE---KLDTLERR 65 (85)
Q Consensus 21 W~nRE~--ie~Is~~I~~i~~FLN~Fd~scr~KLa~lne---KL~~LEr~ 65 (85)
|+..-| -+-|...+..|..=+.+.|..+|.|.+.+|+ +|+.+||+
T Consensus 112 Wd~aKyp~~~~l~elv~~i~~~~~~id~dlk~k~~~Yn~~K~~l~~~~RK 161 (388)
T d1u7la_ 112 WQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERK 161 (388)
T ss_dssp CCTTTSCTTSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 766655 2335555566666678889999999999864 56666665
Done!