BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034767
MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN
GFWVFVDMASGRYLWRNLREIKKH

High Scoring Gene Products

Symbol, full name Information P value
AT5G18150 protein from Arabidopsis thaliana 6.1e-23
AT5G14602 protein from Arabidopsis thaliana 6.3e-21
AT5G58375 protein from Arabidopsis thaliana 1.3e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034767
        (84 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2172384 - symbol:AT5G18150 "AT5G18150" species...   265  6.1e-23   1
TAIR|locus:4515103566 - symbol:AT5G14602 "AT5G14602" spec...   246  6.3e-21   1
TAIR|locus:505006699 - symbol:AT5G58375 "AT5G58375" speci...   177  1.3e-13   1


>TAIR|locus:2172384 [details] [associations]
            symbol:AT5G18150 "AT5G18150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0010200 "response to chitin"
            evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB012246
            GO:GO:0008168 HOGENOM:HOG000243620 ProtClustDB:CLSN2686537
            EMBL:BT005647 EMBL:AK118794 IPI:IPI00535076 RefSeq:NP_197316.1
            UniGene:At.43144 IntAct:Q9FK55 STRING:Q9FK55
            EnsemblPlants:AT5G18150.1 GeneID:831933 KEGG:ath:AT5G18150
            TAIR:At5g18150 eggNOG:NOG251415 InParanoid:Q9FK55 OMA:KMENGFW
            PhylomeDB:Q9FK55 ArrayExpress:Q9FK55 Genevestigator:Q9FK55
            Uniprot:Q9FK55
        Length = 76

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 51/83 (61%), Positives = 65/83 (78%)

Query:     1 MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
             MCP+RF+LVFFSAVLAGYFAW+TV SSPE D       SP++   L ++ E N  + ++N
Sbjct:     1 MCPMRFLLVFFSAVLAGYFAWKTVSSSPEFD-------SPDE---LNEKQELNLKKKMEN 50

Query:    61 GFWVFVDMASGRYLWRNLREIKK 83
             GFWVFVDMASGRYLWRNL+E+++
Sbjct:    51 GFWVFVDMASGRYLWRNLKEMRE 73


>TAIR|locus:4515103566 [details] [associations]
            symbol:AT5G14602 "AT5G14602" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AL163792 IPI:IPI00892212
            RefSeq:NP_001119225.1 UniGene:At.64234 EnsemblPlants:AT5G14602.1
            GeneID:6240992 KEGG:ath:AT5G14602 TAIR:At5g14602 eggNOG:NOG281970
            HOGENOM:HOG000243620 OMA:RTTLNDK PhylomeDB:B3H764
            ProtClustDB:CLSN2686537 Genevestigator:B3H764 Uniprot:B3H764
        Length = 80

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 48/83 (57%), Positives = 58/83 (69%)

Query:     1 MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTRSIQN 60
             MCPLRF+LVFFSAVLAGY AWRTV S+PE   + L      +K  L      +F R + N
Sbjct:     1 MCPLRFVLVFFSAVLAGYIAWRTVNSTPELFSDELLQAEAKEKQGL------DFKRKMDN 54

Query:    61 GFWVFVDMASGRYLWRNLREIKK 83
             G W FVDMASGRYLWRNL+E+++
Sbjct:    55 GLWTFVDMASGRYLWRNLKEMRQ 77


>TAIR|locus:505006699 [details] [associations]
            symbol:AT5G58375 "AT5G58375" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0008168 UniGene:At.49188
            HOGENOM:HOG000243620 EMBL:BT010158 IPI:IPI00529523
            RefSeq:NP_568877.1 PaxDb:Q7XA76 PRIDE:Q7XA76
            EnsemblPlants:AT5G58375.1 GeneID:835950 KEGG:ath:AT5G58375
            TAIR:At5g58375 eggNOG:NOG298914 InParanoid:Q7XA76 OMA:WTCVDMA
            PhylomeDB:Q7XA76 ProtClustDB:CLSN2690042 Genevestigator:Q7XA76
            Uniprot:Q7XA76
        Length = 85

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 37/81 (45%), Positives = 51/81 (62%)

Query:     1 MCPLRFILVFFSAVLAGYFAWRTVRSSPEADINSLSDDSPNDKTSLKDEDESNFTR---S 57
             MCPLR IL+F SA LAG+F  + + S+ +  +    DDS  D     D+  S F++   +
Sbjct:     1 MCPLRLILIFLSATLAGFFVLQKLNSTSDDPL----DDSFTDAEHADDDSVSGFSKVGMA 56

Query:    58 IQNGFWVFVDMASGRYLWRNL 78
             +++GFW  VDMASGRYLW NL
Sbjct:    57 MKSGFWTCVDMASGRYLWNNL 77


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.135   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       84        84   0.00091  102 3  11 22  0.40    29
                                                     29  0.45    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  555 (59 KB)
  Total size of DFA:  113 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.17u 0.18s 12.35t   Elapsed:  00:00:00
  Total cpu time:  12.17u 0.18s 12.35t   Elapsed:  00:00:00
  Start:  Fri May 10 01:02:17 2013   End:  Fri May 10 01:02:17 2013

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