BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034773
MEKSKSFSGNPSSCFDAQFGFEDRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNMY
TMEGKLKSSLRNSFKWIKNKFTDD

High Scoring Gene Products

Symbol, full name Information P value
AT4G09890 protein from Arabidopsis thaliana 1.4e-16
AT5G11970 protein from Arabidopsis thaliana 5.9e-09
AT2G19460 protein from Arabidopsis thaliana 1.6e-08
AT2G47480 protein from Arabidopsis thaliana 1.6e-08
AT3G13910 protein from Arabidopsis thaliana 4.2e-08
AT3G05725 protein from Arabidopsis thaliana 3.8e-07
AT3G62640 protein from Arabidopsis thaliana 7.8e-07
AT1G72720 protein from Arabidopsis thaliana 2.6e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034773
        (84 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2140598 - symbol:AT4G09890 "AT4G09890" species...   205  1.4e-16   1
TAIR|locus:2143059 - symbol:AT5G11970 "AT5G11970" species...   133  5.9e-09   1
TAIR|locus:2047700 - symbol:AT2G19460 "AT2G19460" species...   129  1.6e-08   1
TAIR|locus:2062018 - symbol:AT2G47480 "AT2G47480" species...   129  1.6e-08   1
TAIR|locus:2088227 - symbol:AT3G13910 "AT3G13910" species...   125  4.2e-08   1
TAIR|locus:1006230186 - symbol:AT3G05725 "AT3G05725" spec...   116  3.8e-07   1
TAIR|locus:2081630 - symbol:AT3G62640 "AT3G62640" species...   113  7.8e-07   1
TAIR|locus:2030295 - symbol:AT1G72720 "AT1G72720" species...   108  2.6e-06   1


>TAIR|locus:2140598 [details] [associations]
            symbol:AT4G09890 "AT4G09890" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161516
            EMBL:AL049481 HOGENOM:HOG000237973 InterPro:IPR021899 Pfam:PF12023
            EMBL:BT010814 EMBL:BT011288 IPI:IPI00535178 PIR:T03993
            RefSeq:NP_192727.1 UniGene:At.48838 STRING:Q9T0E8 DNASU:826579
            EnsemblPlants:AT4G09890.1 GeneID:826579 KEGG:ath:AT4G09890
            TAIR:At4g09890 eggNOG:NOG319647 InParanoid:Q9T0E8 OMA:NGPCINT
            PhylomeDB:Q9T0E8 ProtClustDB:CLSN2915958 ArrayExpress:Q9T0E8
            Genevestigator:Q9T0E8 Uniprot:Q9T0E8
        Length = 87

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 44/85 (51%), Positives = 59/85 (69%)

Query:     1 MEKSKSFSGNPSSCFDAQFGFE-DRSKSYSFNGPTGKADVLASSGNPESKRRKRVAAYNM 59
             M+ SKS++   SS    +FG++ +RS SY+FNGP    D       PE KR+KRVA+YN+
Sbjct:     2 MKGSKSYTEYSSSFSTDEFGYDQNRSNSYNFNGPCINTD-------PEMKRKKRVASYNL 54

Query:    60 YTMEGKLKSSLRNSFKWIKNKFTDD 84
             +  E KLKS+L+NSFKWIKNKF+ D
Sbjct:    55 FATEEKLKSTLKNSFKWIKNKFSGD 79


>TAIR|locus:2143059 [details] [associations]
            symbol:AT5G11970 "AT5G11970" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AL163812 HOGENOM:HOG000237973 InterPro:IPR021899 Pfam:PF12023
            EMBL:AY070391 EMBL:AY096734 EMBL:AY085182 IPI:IPI00526444
            PIR:T48556 RefSeq:NP_196758.1 UniGene:At.28372 STRING:Q9LYH6
            PRIDE:Q9LYH6 EnsemblPlants:AT5G11970.1 GeneID:831070
            KEGG:ath:AT5G11970 TAIR:At5g11970 eggNOG:NOG282557
            InParanoid:Q9LYH6 OMA:SWSFNDP PhylomeDB:Q9LYH6
            ProtClustDB:CLSN2916475 ArrayExpress:Q9LYH6 Genevestigator:Q9LYH6
            Uniprot:Q9LYH6
        Length = 105

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 22/38 (57%), Positives = 32/38 (84%)

Query:    45 NPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKFT 82
             +PE +R+KRVA+Y MY +EGK+K S RNSF+W+K ++T
Sbjct:    61 DPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYT 98


>TAIR|locus:2047700 [details] [associations]
            symbol:AT2G19460 "AT2G19460" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC005917
            EMBL:AC003058 HOGENOM:HOG000237973 InterPro:IPR021899 Pfam:PF12023
            EMBL:AY034990 EMBL:BT015112 IPI:IPI00533272 PIR:T01295
            RefSeq:NP_565454.1 UniGene:At.13343 PRIDE:O64580
            EnsemblPlants:AT2G19460.1 GeneID:816465 KEGG:ath:AT2G19460
            TAIR:At2g19460 eggNOG:NOG262312 InParanoid:O64580 OMA:QDLRCYS
            PhylomeDB:O64580 ProtClustDB:CLSN2914949 ArrayExpress:O64580
            Genevestigator:O64580 Uniprot:O64580
        Length = 116

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 26/52 (50%), Positives = 36/52 (69%)

Query:    31 NGPTGKADVLASSG--NPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNK 80
             N   G++   +S G  +P+ +R+KRV +Y  YT+EGKLK S R SFKWIK+K
Sbjct:    59 NPKKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDK 110


>TAIR|locus:2062018 [details] [associations]
            symbol:AT2G47480 "AT2G47480" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 GenomeReviews:CT485783_GR
            UniGene:At.24396 EMBL:AC002535 UniGene:At.66351 EMBL:AY144100
            EMBL:AY649226 EMBL:AK222222 EMBL:AK230413 IPI:IPI00535540
            PIR:T00436 RefSeq:NP_182270.1 EnsemblPlants:AT2G47480.1
            GeneID:819361 KEGG:ath:AT2G47480 TAIR:At2g47480 eggNOG:NOG273200
            HOGENOM:HOG000237973 InParanoid:O22262 OMA:IARYKAY PhylomeDB:O22262
            ProtClustDB:CLSN2683613 Genevestigator:O22262 InterPro:IPR021899
            Pfam:PF12023 Uniprot:O22262
        Length = 110

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 22/34 (64%), Positives = 29/34 (85%)

Query:    47 ESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNK 80
             E KR+KR+A Y  YT+EGK+KS+L+N F+WIKNK
Sbjct:    69 EMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNK 102


>TAIR|locus:2088227 [details] [associations]
            symbol:AT3G13910 "AT3G13910" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            GO:GO:0005886 EMBL:CP002686 EMBL:AB019229 InterPro:IPR021899
            Pfam:PF12023 EMBL:AY065234 EMBL:AY117295 IPI:IPI00528412
            RefSeq:NP_566468.1 UniGene:At.28555 UniGene:At.70579 STRING:Q9LVK8
            PRIDE:Q9LVK8 EnsemblPlants:AT3G13910.1 GeneID:820604
            KEGG:ath:AT3G13910 TAIR:At3g13910 OMA:GSIRKSF PhylomeDB:Q9LVK8
            ProtClustDB:CLSN2914994 ArrayExpress:Q9LVK8 Genevestigator:Q9LVK8
            Uniprot:Q9LVK8
        Length = 102

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 30/79 (37%), Positives = 43/79 (54%)

Query:     9 GNPSSCFDAQFGFEDRSKSYSFNGPTGK----ADVLASSG----NPESKRRKRVAAYNMY 60
             G  S  FD   G + ++  Y       K    AD  AS      +PES+R++RVA Y +Y
Sbjct:    19 GYNSGSFDDSAGDQSQTNDYQLKIKKSKSVPNADRAASRSWSFSDPESRRKRRVAGYKVY 78

Query:    61 TMEGKLKSSLRNSFKWIKN 79
             ++E K+K S+R SFKW K+
Sbjct:    79 SVEQKMKGSIRKSFKWFKD 97


>TAIR|locus:1006230186 [details] [associations]
            symbol:AT3G05725 "AT3G05725" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR021899 Pfam:PF12023 EMBL:AY735601 EMBL:AY924764
            IPI:IPI00528344 RefSeq:NP_974231.2 UniGene:At.49605
            EnsemblPlants:AT3G05725.1 GeneID:2745870 KEGG:ath:AT3G05725
            TAIR:At3g05725 PhylomeDB:Q5XVC1 Genevestigator:Q5XVC1
            Uniprot:Q5XVC1
        Length = 124

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 20/34 (58%), Positives = 28/34 (82%)

Query:    45 NPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIK 78
             +PE KR++RVA Y +Y+ EGK+K +LR S+KWIK
Sbjct:    81 DPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIK 114


>TAIR|locus:2081630 [details] [associations]
            symbol:AT3G62640 "AT3G62640" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009827 "plant-type cell wall
            modification" evidence=RCA] [GO:0009860 "pollen tube growth"
            evidence=RCA] EMBL:CP002686 EMBL:AL162651 ProtClustDB:CLSN2683613
            InterPro:IPR021899 Pfam:PF12023 EMBL:BT004692 EMBL:AK118599
            IPI:IPI00535847 PIR:T48053 RefSeq:NP_191823.1 UniGene:At.34081
            EnsemblPlants:AT3G62640.1 GeneID:825438 KEGG:ath:AT3G62640
            TAIR:At3g62640 InParanoid:Q9LZK1 OMA:KRIATYK PhylomeDB:Q9LZK1
            Genevestigator:Q9LZK1 Uniprot:Q9LZK1
        Length = 110

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 21/54 (38%), Positives = 35/54 (64%)

Query:    32 GPTGKADVLASSG---NPESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIKNKFT 82
             G T K    A+     + E+KR+KR+A Y  Y +EGK+KS+++  F WIK++++
Sbjct:    52 GSTSKTRTTATPWRLIDAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYS 105


>TAIR|locus:2030295 [details] [associations]
            symbol:AT1G72720 "AT1G72720" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC010926
            HOGENOM:HOG000237973 InterPro:IPR021899 Pfam:PF12023 EMBL:BT024792
            EMBL:AK117766 IPI:IPI00519348 PIR:A96752 RefSeq:NP_177416.1
            UniGene:At.43037 EnsemblPlants:AT1G72720.1 GeneID:843604
            KEGG:ath:AT1G72720 TAIR:At1g72720 eggNOG:NOG262133 OMA:TIVRDDS
            PhylomeDB:Q9CAI6 ProtClustDB:CLSN2912729 Genevestigator:Q9CAI6
            Uniprot:Q9CAI6
        Length = 127

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 18/32 (56%), Positives = 27/32 (84%)

Query:    47 ESKRRKRVAAYNMYTMEGKLKSSLRNSFKWIK 78
             E +R+KRVA+YN+Y +EG++K S++ SFKW K
Sbjct:    85 EIQRKKRVASYNVYGVEGRVKGSMKKSFKWFK 116


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.311   0.126   0.363    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       84        84   0.00091  102 3  11 23  0.49    29
                                                     29  0.45    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  508 (54 KB)
  Total size of DFA:  99 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.00u 0.14s 11.14t   Elapsed:  00:00:01
  Total cpu time:  11.00u 0.14s 11.14t   Elapsed:  00:00:01
  Start:  Fri May 10 01:06:38 2013   End:  Fri May 10 01:06:39 2013

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