BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034774
MAWRCGTSARTVMSSARSYLPRIRPSPPPVHANRLRSRLSLPTTTRSIGCTQSLMPLHGV
VAATHLTSHISVHARAFCDLSQGT

High Scoring Gene Products

Symbol, full name Information P value
AT2G15000 protein from Arabidopsis thaliana 1.2e-12
AT4G34265 protein from Arabidopsis thaliana 2.4e-12
AT4G17310 protein from Arabidopsis thaliana 1.1e-05
AT5G47455 protein from Arabidopsis thaliana 1.5e-05
NOXY2
AT5G11630
protein from Arabidopsis thaliana 0.00045
AT1G55205 protein from Arabidopsis thaliana 0.00072

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034774
        (84 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2055787 - symbol:AT2G15000 "AT2G15000" species...   168  1.2e-12   1
TAIR|locus:505006558 - symbol:AT4G34265 "AT4G34265" speci...   165  2.4e-12   1
TAIR|locus:2130819 - symbol:AT4G17310 species:3702 "Arabi...   102  1.1e-05   1
TAIR|locus:505006678 - symbol:AT5G47455 "AT5G47455" speci...   101  1.5e-05   1
TAIR|locus:2181925 - symbol:NOXY2 "AT5G11630" species:370...    87  0.00045   1
TAIR|locus:4010713552 - symbol:AT1G55205 "AT1G55205" spec...    85  0.00072   1


>TAIR|locus:2055787 [details] [associations]
            symbol:AT2G15000 "AT2G15000" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
            process" evidence=RCA] EMBL:CP002685 EMBL:AC005957 IPI:IPI00846837
            RefSeq:NP_001077892.1 RefSeq:NP_001077893.1 UniGene:At.40475
            STRING:A8MR87 EnsemblPlants:AT2G15000.4 EnsemblPlants:AT2G15000.5
            GeneID:815989 KEGG:ath:AT2G15000 TAIR:At2g15000 eggNOG:NOG243935
            HOGENOM:HOG000237694 OMA:MAWRNAG PhylomeDB:A8MR87
            ProtClustDB:CLSN2688123 Genevestigator:A8MR87 Uniprot:A8MR87
        Length = 101

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 42/95 (44%), Positives = 60/95 (63%)

Query:     1 MAWR-CGTSARTVMSS-ARS--------YLPRIRPSPPPVHANRLRSRLSLPTTTR-SIG 49
             MAWR  G++AR+ +S+ ARS         LPR+RP    + + R     S P+    ++G
Sbjct:     1 MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPPQSSLPSRRFT--FSSPSRNLGALG 58

Query:    50 CTQSLMPLHGVVAATHLTSHISVHARAFCDLSQGT 84
             CTQS +PL+ VVA + LTSH++V+ RAFC+LS GT
Sbjct:    59 CTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGT 93


>TAIR|locus:505006558 [details] [associations]
            symbol:AT4G34265 "AT4G34265" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002687 HOGENOM:HOG000237694
            ProtClustDB:CLSN2688123 EMBL:AY086804 EMBL:BT004935 EMBL:AK118797
            EMBL:AK175209 EMBL:AK175277 EMBL:AK175290 EMBL:AK175532
            EMBL:AK175706 EMBL:AK175886 EMBL:AK176172 EMBL:AK176282
            EMBL:AK176497 EMBL:AK176537 EMBL:AK176565 EMBL:AK176658
            EMBL:AK176803 IPI:IPI00548379 RefSeq:NP_567963.3 UniGene:At.25513
            UniGene:At.75113 EnsemblPlants:AT4G34265.1 GeneID:829576
            KEGG:ath:AT4G34265 TAIR:At4g34265 InParanoid:Q8LC44 OMA:FTNPRNL
            PhylomeDB:Q8LC44 Genevestigator:Q8LC44 Uniprot:Q8LC44
        Length = 94

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 45/94 (47%), Positives = 61/94 (64%)

Query:     1 MAWRCGTSARTVMSSARSYLPRIRPSPPPVHANRLR-SRLSLP-------TTTRSIG--- 49
             MAWR  ++AR+ +S A +  P +R SPPP    RLR S+ SLP       T  R++G   
Sbjct:     1 MAWR--SAARSFVS-ATARAPSLR-SPPPT-LPRLRPSQSSLPRRRFASFTNPRNLGELG 55

Query:    50 CTQSLMPLHGVVAATHLTSHISVHARAFCDLSQG 83
             CT+S +PL+ VVAA  LTSH++V+ RAFC+LS G
Sbjct:    56 CTESFLPLYNVVAAARLTSHLNVNLRAFCELSNG 89


>TAIR|locus:2130819 [details] [associations]
            symbol:AT4G17310 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002687
            UniGene:At.26556 EMBL:AY050862 EMBL:BT010622 EMBL:AK175517
            IPI:IPI00546833 RefSeq:NP_193463.1 EnsemblPlants:AT4G17310.1
            GeneID:827444 KEGG:ath:AT4G17310 TAIR:At4g17310 InParanoid:Q949V8
            OMA:CRRFISK PhylomeDB:Q949V8 ProtClustDB:CLSN2680468
            Genevestigator:Q949V8 Uniprot:Q949V8
        Length = 99

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 31/78 (39%), Positives = 43/78 (55%)

Query:     7 TSARTVMSSARSYLPRIRPSPPPVHANRLRSRLSLPTTTRSIGCTQSLMPLHGVVAATHL 66
             T+  T  +S+  +  R+ PS P  H +  R     P+    +GC QSL+PLH  VAA  L
Sbjct:    24 TTGSTSAASSAGF--RL-PSQPTRHFSFSRC----PS---ELGCVQSLLPLHSTVAAARL 73

Query:    67 TSHISVHARAFCDLSQGT 84
             TS +S  +R+   LSQGT
Sbjct:    74 TSCLSTTSRSSRALSQGT 91


>TAIR|locus:505006678 [details] [associations]
            symbol:AT5G47455 "AT5G47455" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM;IDA] [GO:0005886 "plasma membrane"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            GO:GO:0005739 EMBL:CP002688 UniGene:At.66689 IPI:IPI00533845
            RefSeq:NP_568683.2 EnsemblPlants:AT5G47455.4 GeneID:834795
            KEGG:ath:AT5G47455 OMA:RNSPIGT Uniprot:F4JX57
        Length = 116

 Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 32/80 (40%), Positives = 43/80 (53%)

Query:     6 GTSARTVMSSARSYLPRIRPSPPPVHANRLRSRLSLPTTTRSIGCTQSLMPLHGVVAATH 65
             GT +    +S+  +  RI PS P   A+ L  R S       +GC QSL+PLH  VAA  
Sbjct:    28 GTGSSPAAASSAGF--RI-PSKPA--ASPL-PRFSFSRCPSELGCVQSLLPLHSTVAAAR 81

Query:    66 LTSHISVHARAFCDLSQ-GT 84
             LTS +S  +R+   L+Q GT
Sbjct:    82 LTSCLSTTSRSSRALTQDGT 101


>TAIR|locus:2181925 [details] [associations]
            symbol:NOXY2 "AT5G11630" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0042742
            "defense response to bacterium" evidence=IMP] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0048364 "root development"
            evidence=IMP] [GO:0050832 "defense response to fungus"
            evidence=IMP] [GO:0071433 "cell wall repair" evidence=IMP]
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0042742 EMBL:AL163814
            HOGENOM:HOG000237694 IPI:IPI00543806 PIR:T48522 RefSeq:NP_196724.3
            UniGene:At.32230 UniGene:At.49008 STRING:Q9LYG7
            EnsemblPlants:AT5G11630.1 GeneID:831035 KEGG:ath:AT5G11630
            TAIR:At5g11630 InParanoid:Q9LYG7 OMA:LCSANPG PhylomeDB:Q9LYG7
            ProtClustDB:CLSN2699113 Genevestigator:Q9LYG7 Uniprot:Q9LYG7
        Length = 93

 Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
 Identities = 28/86 (32%), Positives = 44/86 (51%)

Query:     1 MAWRCGTSARTVMSSARSYLPRIRPSPPPVHANRLRSRLSLPTTTRSIG---CTQSLMPL 57
             MA RC + ++   S+ RS + +  PS  P  A+        P  +R IG     QSL+PL
Sbjct:     1 MASRCRSLSKPAFSAFRSAMNK--PSIRPKSASSFIGVPPSPGFSRPIGQLGSLQSLLPL 58

Query:    58 HGVVAATHLTSHISVHARAFCDLSQG 83
             +  VA+  LTS + + ++    L+QG
Sbjct:    59 YSAVASARLTSCLGIDSQNSRSLAQG 84


>TAIR|locus:4010713552 [details] [associations]
            symbol:AT1G55205 "AT1G55205" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 EMBL:AC027034
            HOGENOM:HOG000237694 IPI:IPI00891930 RefSeq:NP_001117497.1
            UniGene:At.49462 UniGene:At.69368 EnsemblPlants:AT1G55205.2
            GeneID:5007805 KEGG:ath:AT1G55205 TAIR:At1g55205 OMA:SVESKSW
            PhylomeDB:B3H4H0 ProtClustDB:CLSN2699057 Genevestigator:B3H4H0
            Uniprot:B3H4H0
        Length = 103

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 21/67 (31%), Positives = 35/67 (52%)

Query:    18 SYLPR-IRPSPPPVHANRLRSRLSLPTTTRSIGCTQSLMPLHGVVAATHLTSHISVHARA 76
             S LP  I+ S P    +R+     LP     + C  S++PLH  +A+  L S +SV +++
Sbjct:    29 SSLPSPIKSSSPSSATSRINQSFRLPV---ELSCCLSMLPLHSAIASARLISSLSVESKS 85

Query:    77 FCDLSQG 83
             +  + QG
Sbjct:    86 WGLVPQG 92


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.128   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       84        84   0.00091  102 3  11 22  0.37    29
                                                     29  0.45    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  519 (55 KB)
  Total size of DFA:  100 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.51u 0.16s 10.67t   Elapsed:  00:00:00
  Total cpu time:  10.51u 0.16s 10.67t   Elapsed:  00:00:01
  Start:  Fri May 10 01:07:57 2013   End:  Fri May 10 01:07:58 2013

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