Query 034774
Match_columns 84
No_of_seqs 103 out of 113
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 10:06:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034774.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034774hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1n11a_ d.211.1.1 (A:) Ankyrin 6.8 78 0.0056 20.0 1.1 10 54-63 1-10 (408)
2 d1ixva_ d.211.1.1 (A:) 26S pro 6.6 84 0.0061 18.2 1.1 9 55-63 2-10 (229)
3 d2o3aa1 c.116.1.8 (A:1-167) Un 6.1 28 0.002 23.2 -1.6 16 64-79 16-31 (167)
4 d1k1aa_ d.211.1.1 (A:) bcl-3 { 4.9 1.1E+02 0.0082 16.6 0.9 10 54-63 4-13 (228)
5 d2o3ia1 e.73.1.1 (A:2-390) Hyp 4.3 84 0.0061 22.4 -0.0 20 44-66 104-123 (389)
6 d1myoa_ d.211.1.1 (A:) Myotrop 3.0 1.9E+02 0.014 15.5 0.8 12 52-63 67-78 (118)
7 d1iknd_ d.211.1.1 (D:) I-kappa 2.8 2.2E+02 0.016 16.5 0.9 12 52-63 38-49 (221)
8 d1ihba_ d.211.1.1 (A:) p18ink4 2.4 2.7E+02 0.02 14.8 0.9 8 56-63 4-11 (156)
9 d1ycsb1 d.211.1.1 (B:327-456) 2.3 2.6E+02 0.019 15.1 0.8 11 53-63 67-77 (130)
10 d2fo1e1 d.211.1.1 (E:1021-1297 2.1 3E+02 0.022 15.9 0.9 9 56-64 3-11 (277)
No 1
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.76 E-value=78 Score=20.00 Aligned_cols=10 Identities=40% Similarity=0.461 Sum_probs=6.4
Q ss_pred cchhHHHHHH
Q 034774 54 LMPLHGVVAA 63 (84)
Q Consensus 54 llPLHsavAs 63 (84)
|-|||.|+..
T Consensus 1 ~TpL~~Aa~~ 10 (408)
T d1n11a_ 1 LTPLHVASFM 10 (408)
T ss_dssp CCHHHHHHHH
T ss_pred CChHHHHHHC
Confidence 4577777654
No 2
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=6.63 E-value=84 Score=18.20 Aligned_cols=9 Identities=33% Similarity=0.586 Sum_probs=6.0
Q ss_pred chhHHHHHH
Q 034774 55 MPLHGVVAA 63 (84)
Q Consensus 55 lPLHsavAs 63 (84)
.|||.|+..
T Consensus 2 ~pLh~A~~~ 10 (229)
T d1ixva_ 2 YPLHQACME 10 (229)
T ss_dssp CHHHHHHHH
T ss_pred HhHHHHHHc
Confidence 377777765
No 3
>d2o3aa1 c.116.1.8 (A:1-167) Uncharacterized protein AF0751 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=6.09 E-value=28 Score=23.22 Aligned_cols=16 Identities=31% Similarity=0.675 Sum_probs=13.3
Q ss_pred Hhhhccccccccccee
Q 034774 64 THLTSHISVHARAFCD 79 (84)
Q Consensus 64 ArLtS~ls~~~r~~~~ 79 (84)
-|+|.|+++.+|++++
T Consensus 16 ~RiTTHvaLtARAfGA 31 (167)
T d2o3aa1 16 KRISTHVALTARAFGA 31 (167)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred cchhhHHHHHHHHhcC
Confidence 3789999999998875
No 4
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.94 E-value=1.1e+02 Score=16.63 Aligned_cols=10 Identities=40% Similarity=0.398 Sum_probs=7.3
Q ss_pred cchhHHHHHH
Q 034774 54 LMPLHGVVAA 63 (84)
Q Consensus 54 llPLHsavAs 63 (84)
.-|||.|+..
T Consensus 4 ~TpLh~A~~~ 13 (228)
T d1k1aa_ 4 DTPLHIAVVQ 13 (228)
T ss_dssp CCHHHHHHHT
T ss_pred ccHHHHHHHc
Confidence 4588988764
No 5
>d2o3ia1 e.73.1.1 (A:2-390) Hypothetical protein CV3147 {Chromobacterium violaceum [TaxId: 536]}
Probab=4.33 E-value=84 Score=22.38 Aligned_cols=20 Identities=15% Similarity=0.189 Sum_probs=15.2
Q ss_pred chhccccccccchhHHHHHHHhh
Q 034774 44 TTRSIGCTQSLMPLHGVVAATHL 66 (84)
Q Consensus 44 ~~~~lg~~~SllPLHsavAsArL 66 (84)
.+.|.|...+++|| +++|++
T Consensus 104 ~~~EiGG~Ns~~pl---~~AA~~ 123 (389)
T d2o3ia1 104 VAPESGALGFVVAS---LVAAKL 123 (389)
T ss_dssp ECSSSSHHHHHHHH---HHHHHH
T ss_pred EeeccCCccHHHHH---HHHHHh
Confidence 46789999999999 555543
No 6
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=3.04 E-value=1.9e+02 Score=15.52 Aligned_cols=12 Identities=25% Similarity=0.407 Sum_probs=8.6
Q ss_pred cccchhHHHHHH
Q 034774 52 QSLMPLHGVVAA 63 (84)
Q Consensus 52 ~SllPLHsavAs 63 (84)
+..-|||.|+..
T Consensus 67 ~g~tpLh~A~~~ 78 (118)
T d1myoa_ 67 HHITPLLSAVYE 78 (118)
T ss_dssp SCSCHHHHHHTT
T ss_pred ccccchhhhhhc
Confidence 446799988754
No 7
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.84 E-value=2.2e+02 Score=16.45 Aligned_cols=12 Identities=33% Similarity=0.360 Sum_probs=9.2
Q ss_pred cccchhHHHHHH
Q 034774 52 QSLMPLHGVVAA 63 (84)
Q Consensus 52 ~SllPLHsavAs 63 (84)
+..-|||.|+..
T Consensus 38 ~g~TpLh~A~~~ 49 (221)
T d1iknd_ 38 LQQTPLHLAVIT 49 (221)
T ss_dssp TCCCHHHHHHHT
T ss_pred CCCccccccccc
Confidence 456799999875
No 8
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.42 E-value=2.7e+02 Score=14.78 Aligned_cols=8 Identities=25% Similarity=0.214 Sum_probs=4.1
Q ss_pred hhHHHHHH
Q 034774 56 PLHGVVAA 63 (84)
Q Consensus 56 PLHsavAs 63 (84)
|||.|+..
T Consensus 4 ~Lh~Aa~~ 11 (156)
T d1ihba_ 4 ELASAAAR 11 (156)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 45555543
No 9
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.29 E-value=2.6e+02 Score=15.13 Aligned_cols=11 Identities=27% Similarity=0.501 Sum_probs=7.8
Q ss_pred ccchhHHHHHH
Q 034774 53 SLMPLHGVVAA 63 (84)
Q Consensus 53 SllPLHsavAs 63 (84)
-..|||.|+-.
T Consensus 67 g~tpLh~A~~~ 77 (130)
T d1ycsb1 67 GWTPLHCAASC 77 (130)
T ss_dssp CCCHHHHHHHT
T ss_pred Ccccccccchh
Confidence 35699988643
No 10
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}
Probab=2.13 E-value=3e+02 Score=15.90 Aligned_cols=9 Identities=22% Similarity=0.283 Sum_probs=0.0
Q ss_pred hhHHHHHHH
Q 034774 56 PLHGVVAAT 64 (84)
Q Consensus 56 PLHsavAsA 64 (84)
|||-+++++
T Consensus 3 p~~~~~~~~ 11 (277)
T d2fo1e1 3 PIKLHTEAA 11 (277)
T ss_dssp CCHHHHHHH
T ss_pred hHHHHHHhC
Done!