Your job contains 1 sequence.
>034779
MSAGGAFGGNRGARPVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYL
ECRMAKNAQSMHSLVHWERDNKET
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034779
(84 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2195160 - symbol:COX19-1 "AT1G66590" species:3... 249 3.0e-21 1
TAIR|locus:2205030 - symbol:COX19-2 "AT1G69750" species:3... 249 3.0e-21 1
ZFIN|ZDB-GENE-070410-29 - symbol:zgc:162175 "zgc:162175" ... 151 7.4e-11 1
POMBASE|SPCC1672.04c - symbol:SPCC1672.04c "mitochondrial... 146 2.5e-10 1
UNIPROTKB|A8E4L1 - symbol:COX19 "Cytochrome c oxidase ass... 141 8.4e-10 1
UNIPROTKB|F8WEL9 - symbol:COX19 "Cytochrome c oxidase ass... 141 8.4e-10 1
UNIPROTKB|F1RIX1 - symbol:COX19 "Uncharacterized protein"... 141 8.4e-10 1
DICTYBASE|DDB_G0288903 - symbol:cox19 "cytochrome oxidase... 140 1.1e-09 1
UNIPROTKB|E2R2R1 - symbol:COX19 "Uncharacterized protein"... 140 1.1e-09 1
UNIPROTKB|E1C8I9 - symbol:COX19 "Uncharacterized protein"... 139 1.4e-09 1
UNIPROTKB|Q49B96 - symbol:COX19 "Cytochrome c oxidase ass... 138 1.8e-09 1
ASPGD|ASPL0000062846 - symbol:AN10178 species:162425 "Eme... 136 2.9e-09 1
MGI|MGI:1915283 - symbol:Cox19 "cytochrome c oxidase asse... 134 4.7e-09 1
RGD|1305631 - symbol:Cox19 "cytochrome c oxidase assembly... 134 4.7e-09 1
SGD|S000007245 - symbol:COX19 "Protein required for cytoc... 130 1.2e-08 1
>TAIR|locus:2195160 [details] [associations]
symbol:COX19-1 "AT1G66590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 InterPro:IPR010625 Pfam:PF06747
IPI:IPI00518865 RefSeq:NP_564879.1 UniGene:At.35379
UniGene:At.48354 PRIDE:F4IEX1 DNASU:842977
EnsemblPlants:AT1G66590.2 GeneID:842977 KEGG:ath:AT1G66590
Uniprot:F4IEX1
Length = 113
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 40/60 (66%), Positives = 50/60 (83%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSMHSL 74
P+PPEKG+FPLDH+H+CD EKK+Y+GCLKSS H+SE CR SKKYL+CRMAKN + +
Sbjct: 30 PIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYLQCRMAKNLMAKQDM 89
>TAIR|locus:2205030 [details] [associations]
symbol:COX19-2 "AT1G69750" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC013289
InterPro:IPR010625 Pfam:PF06747 OMA:CKLEMLN UniGene:At.35379
UniGene:At.48354 DNASU:842977 GeneID:842977 KEGG:ath:AT1G66590
EMBL:BT004690 EMBL:BT029358 EMBL:AK118487 IPI:IPI00545221
PIR:E96719 RefSeq:NP_177133.1 RefSeq:NP_849852.1 STRING:Q9C9L6
PRIDE:Q9C9L6 DNASU:843311 EnsemblPlants:AT1G66590.1
EnsemblPlants:AT1G69750.1 GeneID:843311 KEGG:ath:AT1G69750
TAIR:At1g66590 TAIR:At1g69750 InParanoid:Q9C9L6 PhylomeDB:Q9C9L6
ProtClustDB:CLSN2682574 Genevestigator:Q9C9L6 Uniprot:Q9C9L6
Length = 98
Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 40/60 (66%), Positives = 50/60 (83%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSMHSL 74
P+PPEKG+FPLDH+H+CD EKK+Y+GCLKSS H+SE CR SKKYL+CRMAKN + +
Sbjct: 15 PIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYLQCRMAKNLMAKQDM 74
>ZFIN|ZDB-GENE-070410-29 [details] [associations]
symbol:zgc:162175 "zgc:162175" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] ZFIN:ZDB-GENE-070410-29
InterPro:IPR010625 Pfam:PF06747 eggNOG:NOG302199
GeneTree:ENSGT00390000016895 HOGENOM:HOG000208239
HOVERGEN:HBG081305 OMA:CKLEMLN OrthoDB:EOG4WWRM4 EMBL:BX119976
EMBL:BC171515 EMBL:BC171517 IPI:IPI00846057 RefSeq:NP_001104010.1
UniGene:Dr.94103 Ensembl:ENSDART00000093583 GeneID:100004173
KEGG:dre:100004173 NextBio:20786142 Uniprot:B7ZVA6
Length = 93
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSMHSL 74
P PP+KG FPLDH +C K+ Y+ CL+++ + CRI SK+YLECRM + + L
Sbjct: 14 PRPPDKGAFPLDHFGECKSFKEVYMQCLRNNHFDNSRCRIESKEYLECRMDRQLMTKEPL 73
>POMBASE|SPCC1672.04c [details] [associations]
symbol:SPCC1672.04c "mitochondrial copper chaperone
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005507
"copper ion binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005758 "mitochondrial intermembrane space"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016531
"copper chaperone activity" evidence=ISO] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=ISO]
PomBase:SPCC1672.04c GO:GO:0005829 GO:GO:0005634 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0005758 GO:GO:0016531 GO:GO:0033617
InterPro:IPR010625 Pfam:PF06747 eggNOG:NOG302199
HOGENOM:HOG000208239 PIR:T41048 RefSeq:NP_587875.2 STRING:O14056
EnsemblFungi:SPCC1672.04c.1 GeneID:2538939 OrthoDB:EOG4DBXQD
NextBio:20800115 Uniprot:O14056
Length = 112
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 17 PPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRM 64
PPE+G FPLDH +C K Y+ C+K E CR+ +KKYL+CRM
Sbjct: 17 PPERGSFPLDHFGECTHVMKQYLECIKVKRENQEECRLLAKKYLQCRM 64
>UNIPROTKB|A8E4L1 [details] [associations]
symbol:COX19 "Cytochrome c oxidase assembly protein COX19"
species:9913 "Bos taurus" [GO:0005829 "cytosol" evidence=IEA]
GO:GO:0005829 InterPro:IPR010625 Pfam:PF06747 Gene3D:1.10.810.10
InterPro:IPR009069 EMBL:BC134520 IPI:IPI00695307
RefSeq:NP_001103436.1 UniGene:Bt.64604 STRING:A8E4L1
Ensembl:ENSBTAT00000020289 GeneID:100126182 KEGG:bta:100126182
CTD:90639 eggNOG:NOG302199 GeneTree:ENSGT00390000016895
HOGENOM:HOG000208239 HOVERGEN:HBG081305 InParanoid:A8E4L1
OMA:CKLEMLN OrthoDB:EOG4WWRM4 NextBio:20789014 ArrayExpress:A8E4L1
Uniprot:A8E4L1
Length = 89
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSMHSL 74
P PP+KG FPLDH +C K+ ++ CL+ + ++ CR SK+YLECRM + + L
Sbjct: 14 PRPPDKGSFPLDHFGECKSFKEKFMKCLRDNNFENALCRNESKEYLECRMERQLMAQEPL 73
>UNIPROTKB|F8WEL9 [details] [associations]
symbol:COX19 "Cytochrome c oxidase assembly protein COX19"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
GO:GO:0005737 InterPro:IPR010625 Pfam:PF06747 HGNC:HGNC:28074
EMBL:AC073957 IPI:IPI00893198 ProteinModelPortal:F8WEL9
Ensembl:ENST00000457254 ArrayExpress:F8WEL9 Bgee:F8WEL9
Uniprot:F8WEL9
Length = 122
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSM-HS 73
P PP+KG FPLDH+ +C K+ ++ CL ++ ++ CR SK+YLECRM ++ + HS
Sbjct: 14 PRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYLECRMERSRLGLLHS 73
>UNIPROTKB|F1RIX1 [details] [associations]
symbol:COX19 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737
InterPro:IPR010625 Pfam:PF06747 GeneTree:ENSGT00390000016895
OMA:CKLEMLN EMBL:CU928365 RefSeq:XP_003124303.1 UniGene:Ssc.24511
Ensembl:ENSSSCT00000008282 GeneID:100522861 KEGG:ssc:100522861
Uniprot:F1RIX1
Length = 89
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSMHSL 74
P PP+KG FPLDH +C K+ ++ CL+ + ++ CR SK+YLECRM + + L
Sbjct: 14 PRPPDKGSFPLDHFGECKSFKEKFMKCLRDNNFENALCRNESKEYLECRMERQLMAQEPL 73
>DICTYBASE|DDB_G0288903 [details] [associations]
symbol:cox19 "cytochrome oxidase subunit 19"
species:44689 "Dictyostelium discoideum" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
dictyBase:DDB_G0288903 GO:GO:0005829 EMBL:AAFI02000126
GenomeReviews:CM000154_GR eggNOG:NOG302199 RefSeq:XP_636479.1
STRING:Q54IA0 EnsemblProtists:DDB0305164 GeneID:8626862
KEGG:ddi:DDB_G0288903 OMA:NEPIVAG Uniprot:Q54IA0
Length = 106
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 25/60 (41%), Positives = 33/60 (55%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSMHSL 74
P PP+KG FPLDH +C Y+ CL + S C FSK+YL+CRM N + +
Sbjct: 12 PTPPDKGSFPLDHDSECSKPMLAYVNCLSENNGLSRFCMEFSKEYLKCRMDNNLMAKEDM 71
>UNIPROTKB|E2R2R1 [details] [associations]
symbol:COX19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
GO:GO:0005737 InterPro:IPR010625 Pfam:PF06747
GeneTree:ENSGT00390000016895 OMA:CKLEMLN EMBL:AAEX03004351
Ensembl:ENSCAFT00000018031 Uniprot:E2R2R1
Length = 89
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSMHSL 74
P PP+KG FPLDH +C K+ ++ CL+ S ++ CR SK YLECRM + + L
Sbjct: 14 PRPPDKGSFPLDHFGECKSFKEKFMKCLRDSKFENALCRKESKAYLECRMERQLMAQEPL 73
>UNIPROTKB|E1C8I9 [details] [associations]
symbol:COX19 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] GO:GO:0005737
InterPro:IPR010625 Pfam:PF06747 GeneTree:ENSGT00390000016895
OMA:CKLEMLN EMBL:AADN02023885 IPI:IPI00578280
Ensembl:ENSGALT00000006058 Uniprot:E1C8I9
Length = 92
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSMHSL 74
P PP+KG FPLDH +C K+ ++ CL+ SG +S CR + YL+CRM + + L
Sbjct: 14 PRPPDKGAFPLDHFGECSAFKERFMQCLRDSGFESGACRERAMAYLQCRMDRQLMANEPL 73
>UNIPROTKB|Q49B96 [details] [associations]
symbol:COX19 "Cytochrome c oxidase assembly protein COX19"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005829 GO:GO:0005737
InterPro:IPR010625 Pfam:PF06747 CTD:90639 eggNOG:NOG302199
HOGENOM:HOG000208239 HOVERGEN:HBG081305 OMA:CKLEMLN EMBL:AY957566
EMBL:BC070383 EMBL:BC103632 EMBL:BC110420 IPI:IPI00413436
RefSeq:NP_001026788.1 UniGene:Hs.121593 ProteinModelPortal:Q49B96
STRING:Q49B96 PhosphoSite:Q49B96 DMDM:121943561 PaxDb:Q49B96
PeptideAtlas:Q49B96 PRIDE:Q49B96 Ensembl:ENST00000344111
GeneID:90639 KEGG:hsa:90639 UCSC:uc003sjp.1 GeneCards:GC07M000972
HGNC:HGNC:28074 HPA:HPA021226 MIM:610429 neXtProt:NX_Q49B96
PharmGKB:PA145008561 InParanoid:Q49B96 PhylomeDB:Q49B96
GenomeRNAi:90639 NextBio:76893 ArrayExpress:Q49B96 Bgee:Q49B96
CleanEx:HS_COX19 Genevestigator:Q49B96 Uniprot:Q49B96
Length = 90
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAK 66
P PP+KG FPLDH+ +C K+ ++ CL ++ ++ CR SK+YLECRM +
Sbjct: 14 PRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYLECRMER 65
>ASPGD|ASPL0000062846 [details] [associations]
symbol:AN10178 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IEA] [GO:0005507 "copper ion binding" evidence=IEA]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=IEA] [GO:0030001 "metal ion transport" evidence=IEA]
GO:GO:0005829 GO:GO:0005758 EMBL:BN001308 GO:GO:0005507
GO:GO:0030001 GO:GO:0033617 HOGENOM:HOG000208239 OMA:NEPIVAG
EnsemblFungi:CADANIAT00001327 Uniprot:C8VSE5
Length = 108
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLK-SSGHQSENCRIFSKKYLECRMAKN 67
P PPE+G FPLDH +C + Y+ CLK G E CR +K YL CRM KN
Sbjct: 15 PTPPERGSFPLDHDGECKHLIQSYLRCLKLQRGVNDEQCRRLAKGYLACRMDKN 68
>MGI|MGI:1915283 [details] [associations]
symbol:Cox19 "cytochrome c oxidase assembly protein 19"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:1915283 GO:GO:0005829
InterPro:IPR010625 Pfam:PF06747 CTD:90639 eggNOG:NOG302199
GeneTree:ENSGT00390000016895 HOGENOM:HOG000208239
HOVERGEN:HBG081305 OMA:CKLEMLN OrthoDB:EOG4WWRM4 EMBL:BC031792
IPI:IPI00169545 RefSeq:NP_932097.1 UniGene:Mm.261064 STRING:Q8K0C8
PhosphoSite:Q8K0C8 PRIDE:Q8K0C8 Ensembl:ENSMUST00000049630
GeneID:68033 KEGG:mmu:68033 UCSC:uc009agj.1 InParanoid:Q8K0C8
NextBio:326254 Bgee:Q8K0C8 Genevestigator:Q8K0C8 Uniprot:Q8K0C8
Length = 92
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSMHSL 74
P PP+KG FPLDH +C K+ ++ CL+ +++ CR SK+YL CRM + + L
Sbjct: 14 PRPPDKGSFPLDHFGECKSFKEKFMRCLRDKNYENALCRNESKEYLMCRMQRQLMAPEPL 73
>RGD|1305631 [details] [associations]
symbol:Cox19 "cytochrome c oxidase assembly homolog 19 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005737
"cytoplasm" evidence=IEA;ISO] RGD:1305631 GO:GO:0005737
EMBL:CH474012 InterPro:IPR010625 Pfam:PF06747 CTD:90639 OMA:CKLEMLN
OrthoDB:EOG4WWRM4 IPI:IPI00192780 RefSeq:NP_001100596.1
UniGene:Rn.19996 Ensembl:ENSRNOT00000001735 GeneID:304330
KEGG:rno:304330 UCSC:RGD:1305631 NextBio:652880 Uniprot:D3ZIS5
Length = 92
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSENCRIFSKKYLECRMAKNAQSMHSL 74
P PP+KG FPLDH +C K+ ++ CL+ +++ CR SK+YL CRM + + L
Sbjct: 14 PRPPDKGSFPLDHFGECKSFKEKFMKCLRDKNYENALCRNESKEYLMCRMQRQLMAPEPL 73
>SGD|S000007245 [details] [associations]
symbol:COX19 "Protein required for cytochrome c oxidase
assembly" species:4932 "Saccharomyces cerevisiae" [GO:0005829
"cytosol" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005758 "mitochondrial intermembrane space" evidence=IEA;IDA]
[GO:0030001 "metal ion transport" evidence=ISS;IDA] [GO:0016531
"copper chaperone activity" evidence=ISS] [GO:0005507 "copper ion
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISS;IDA] Reactome:REACT_85873 SGD:S000007245 GO:GO:0005829
GO:GO:0005758 EMBL:BK006945 Reactome:REACT_118590 GO:GO:0030001
GO:GO:0016531 GO:GO:0033617 eggNOG:NOG302199
GeneTree:ENSGT00390000016895 HOGENOM:HOG000208239 OMA:NEPIVAG
OrthoDB:EOG4DBXQD EMBL:Z73125 RefSeq:NP_013082.1
ProteinModelPortal:Q3E731 STRING:Q3E731 PaxDb:Q3E731
PeptideAtlas:Q3E731 EnsemblFungi:YLL018C-A GeneID:850642
KEGG:sce:YLL018C-A CYGD:YLL018c-a NextBio:966576
Genevestigator:Q3E731 Uniprot:Q3E731
Length = 98
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 15 PVPPEKGVFPLDHMHQCDLEKKDYIGCLKSSGHQSE-NCRIFSKKYLECRM 64
P PPE+G FPLDH +C ++Y+ C++ +++ NCR+ +K YL CRM
Sbjct: 14 PTPPERGSFPLDHDGECTKYMQEYLKCMQLVQNENAMNCRLLAKDYLRCRM 64
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 84 72 0.00091 102 3 11 22 0.36 29
29 0.43 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 561 (60 KB)
Total size of DFA: 119 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.63u 0.13s 8.76t Elapsed: 00:00:01
Total cpu time: 8.63u 0.13s 8.76t Elapsed: 00:00:01
Start: Fri May 10 01:10:24 2013 End: Fri May 10 01:10:25 2013