BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034782
MASLSQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKA
AVGVKNNQSNKAVKGTAWFPSYS

High Scoring Gene Products

Symbol, full name Information P value
AT1G68585 protein from Arabidopsis thaliana 1.6e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034782
        (83 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006208 - symbol:AT1G68585 "AT1G68585" speci...   110  1.6e-06   1


>TAIR|locus:505006208 [details] [associations]
            symbol:AT1G68585 "AT1G68585" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
            UniGene:At.35504 UniGene:At.71121 EMBL:AY084276 EMBL:BT028878
            EMBL:AK229745 IPI:IPI00524136 RefSeq:NP_564933.1
            ProteinModelPortal:Q8LGG7 SMR:Q8LGG7 EnsemblPlants:AT1G68585.1
            GeneID:843188 KEGG:ath:AT1G68585 TAIR:At1g68585 eggNOG:NOG273381
            HOGENOM:HOG000272697 InParanoid:Q8LGG7 PhylomeDB:Q8LGG7
            ProtClustDB:CLSN2689086 Genevestigator:Q8LGG7 Uniprot:Q8LGG7
        Length = 116

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 21/45 (46%), Positives = 34/45 (75%)

Query:     4 LSQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILT 48
             L QE++L+AD+RC  CQ+++A+ ++R+ +  S+ V V EKKV LT
Sbjct:    38 LIQEIVLSADIRCSDCQEKVADIMARMIETYSILVSVLEKKVTLT 82


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.127   0.351    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       83        71   0.00091  102 3  11 22  0.46    28
                                                     29  0.42    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  470 (50 KB)
  Total size of DFA:  82 KB (2064 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  6.25u 0.22s 6.47t   Elapsed:  00:00:00
  Total cpu time:  6.25u 0.22s 6.47t   Elapsed:  00:00:00
  Start:  Fri May 10 01:13:21 2013   End:  Fri May 10 01:13:21 2013

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