Query 034782
Match_columns 83
No_of_seqs 106 out of 1175
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 10:14:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034782.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034782hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dxs_X Copper-transporting ATP 99.5 5.9E-14 2E-18 80.8 8.7 60 5-65 1-61 (74)
2 3iwl_A Copper transport protei 99.5 2.9E-14 9.9E-19 81.8 6.5 55 6-61 2-56 (68)
3 4a4j_A Pacszia, cation-transpo 99.5 1.8E-13 6.1E-18 77.7 9.0 58 6-65 2-60 (69)
4 1cc8_A Protein (metallochapero 99.5 2E-13 7E-18 78.6 8.2 53 2-54 1-54 (73)
5 2xmw_A PACS-N, cation-transpor 99.4 1.3E-12 4.3E-17 72.9 8.8 59 4-64 1-60 (71)
6 1opz_A Potential copper-transp 99.4 2.4E-12 8.1E-17 72.5 8.8 63 1-64 1-64 (76)
7 3fry_A Probable copper-exporti 99.4 7.5E-13 2.6E-17 76.6 6.6 46 4-50 3-49 (73)
8 2l3m_A Copper-ION-binding prot 99.4 4.1E-12 1.4E-16 71.2 9.1 59 5-64 4-63 (71)
9 2qif_A Copper chaperone COPZ; 99.4 7E-12 2.4E-16 68.6 9.1 58 6-64 2-60 (69)
10 1osd_A MERP, hypothetical prot 99.4 4.7E-12 1.6E-16 70.9 8.5 58 6-64 3-61 (72)
11 3cjk_B Copper-transporting ATP 99.4 9.1E-12 3.1E-16 70.7 9.1 58 6-64 2-60 (75)
12 1aw0_A Menkes copper-transport 99.4 4.8E-12 1.6E-16 70.9 7.7 58 6-64 3-61 (72)
13 1mwy_A ZNTA; open-faced beta-s 99.3 8.9E-12 3E-16 70.7 8.8 47 5-51 2-49 (73)
14 1yg0_A COP associated protein; 99.3 6.3E-12 2.1E-16 69.2 7.8 57 7-65 2-59 (66)
15 2g9o_A Copper-transporting ATP 99.3 6E-12 2.1E-16 75.6 8.3 60 6-66 3-63 (90)
16 1cpz_A Protein (COPZ); copper 99.3 9.4E-12 3.2E-16 68.8 7.4 56 9-65 3-59 (68)
17 1kvi_A Copper-transporting ATP 99.3 1E-11 3.5E-16 71.3 7.2 59 5-64 7-66 (79)
18 1y3j_A Copper-transporting ATP 99.3 4.9E-12 1.7E-16 72.5 5.8 59 5-64 2-61 (77)
19 1yjr_A Copper-transporting ATP 99.3 1.4E-11 4.7E-16 69.4 7.6 58 6-64 4-62 (75)
20 2ldi_A Zinc-transporting ATPas 99.3 1.3E-11 4.5E-16 68.2 7.3 58 6-64 3-61 (71)
21 2crl_A Copper chaperone for su 99.3 1.4E-11 4.8E-16 75.9 7.3 50 5-54 18-67 (98)
22 2xmm_A SSR2857 protein, ATX1; 99.3 5.6E-12 1.9E-16 69.0 4.9 43 8-50 3-46 (64)
23 2kt2_A Mercuric reductase; nme 99.3 2.6E-11 8.8E-16 67.6 7.6 55 9-65 3-58 (69)
24 1fvq_A Copper-transporting ATP 99.3 2.3E-11 8E-16 68.0 7.2 56 7-64 3-59 (72)
25 1q8l_A Copper-transporting ATP 99.3 1.7E-11 5.8E-16 72.0 6.9 59 5-64 8-67 (84)
26 1jww_A Potential copper-transp 99.3 2.1E-11 7.3E-16 69.6 7.1 58 5-63 2-60 (80)
27 2aj0_A Probable cadmium-transp 99.3 3.2E-11 1.1E-15 68.2 7.5 47 5-51 2-49 (71)
28 2ofg_X Zinc-transporting ATPas 99.3 3.7E-11 1.3E-15 75.0 8.4 59 5-64 7-66 (111)
29 2k2p_A Uncharacterized protein 99.2 1E-11 3.5E-16 74.6 4.9 48 5-52 21-69 (85)
30 2roe_A Heavy metal binding pro 99.2 1.7E-11 5.7E-16 68.5 5.2 53 9-65 3-56 (66)
31 2ew9_A Copper-transporting ATP 99.2 4.5E-11 1.5E-15 75.7 7.8 59 6-65 80-139 (149)
32 2kyz_A Heavy metal binding pro 99.2 3.8E-11 1.3E-15 67.3 5.8 44 8-52 3-47 (67)
33 1p6t_A Potential copper-transp 99.2 5.4E-11 1.9E-15 75.7 7.2 59 6-65 74-133 (151)
34 2kkh_A Putative heavy metal tr 99.2 2E-10 7E-15 68.9 8.1 48 5-52 15-63 (95)
35 2rop_A Copper-transporting ATP 99.1 3.9E-10 1.3E-14 75.9 8.9 58 6-64 122-180 (202)
36 2ew9_A Copper-transporting ATP 99.1 3.4E-10 1.2E-14 71.5 7.6 47 5-51 3-50 (149)
37 2rop_A Copper-transporting ATP 99.1 5.4E-10 1.8E-14 75.2 7.5 61 5-66 19-80 (202)
38 1qup_A Superoxide dismutase 1 99.0 9.9E-10 3.4E-14 77.1 7.7 60 4-63 4-63 (222)
39 1p6t_A Potential copper-transp 99.0 5.1E-09 1.7E-13 66.5 8.7 49 3-51 3-52 (151)
40 1jk9_B CCS, copper chaperone f 98.9 3.3E-09 1.1E-13 75.8 7.3 58 5-62 6-63 (249)
41 3j09_A COPA, copper-exporting 98.9 5.9E-09 2E-13 82.9 8.1 57 7-64 3-60 (723)
42 3cq1_A Putative uncharacterize 93.5 0.064 2.2E-06 32.7 3.1 53 7-68 42-100 (103)
43 1uwd_A Hypothetical protein TM 92.5 0.075 2.6E-06 32.3 2.4 53 7-68 43-101 (103)
44 3lno_A Putative uncharacterize 90.9 0.26 8.8E-06 30.3 3.6 52 8-68 46-104 (108)
45 4gwb_A Peptide methionine sulf 88.0 2.1 7.3E-05 28.7 6.7 54 4-63 1-69 (168)
46 2jsx_A Protein NAPD; TAT, proo 85.2 3.5 0.00012 25.0 6.0 38 17-54 16-53 (95)
47 1nwa_A Peptide methionine sulf 78.9 7.3 0.00025 26.9 6.4 53 5-63 25-92 (203)
48 1fvg_A Peptide methionine sulf 72.4 15 0.00053 25.2 6.6 53 5-63 43-114 (199)
49 3bqh_A PILB, peptide methionin 70.9 14 0.00048 25.2 6.2 52 6-63 3-73 (193)
50 1yj7_A ESCJ; mixed alpha/beta, 70.9 16 0.00054 24.2 6.3 50 20-69 92-152 (171)
51 3e0m_A Peptide methionine sulf 69.1 14 0.00048 27.1 6.1 53 5-63 2-71 (313)
52 1ff3_A Peptide methionine sulf 67.4 23 0.00078 24.5 6.7 53 5-63 42-113 (211)
53 2j89_A Methionine sulfoxide re 65.3 22 0.00074 25.5 6.4 53 5-63 94-165 (261)
54 1je3_A EC005, hypothetical 8.6 62.5 9.4 0.00032 23.0 3.6 29 3-31 23-52 (97)
55 1jdq_A TM006 protein, hypothet 62.3 14 0.00048 22.2 4.3 25 7-31 26-51 (98)
56 2nyt_A Probable C->U-editing e 58.3 6.4 0.00022 26.6 2.5 31 8-38 85-116 (190)
57 1owx_A Lupus LA protein, SS-B, 56.3 24 0.00083 22.0 4.8 46 7-52 18-65 (121)
58 3bpd_A Uncharacterized protein 54.8 23 0.0008 21.9 4.4 58 5-66 6-71 (100)
59 2k1h_A Uncharacterized protein 54.2 17 0.0006 21.9 3.7 47 21-69 39-87 (94)
60 3hz7_A Uncharacterized protein 53.6 18 0.00062 21.1 3.7 22 10-31 4-26 (87)
61 2hiy_A Hypothetical protein; C 50.6 31 0.0011 22.8 4.9 48 20-68 24-71 (183)
62 2x3d_A SSO6206; unknown functi 50.4 41 0.0014 20.6 7.0 46 4-50 3-57 (96)
63 2kgs_A Uncharacterized protein 49.2 6.5 0.00022 24.8 1.2 28 35-62 78-105 (132)
64 2raq_A Conserved protein MTH88 47.5 47 0.0016 20.4 5.0 58 4-65 5-70 (97)
65 2yy3_A Elongation factor 1-bet 46.3 36 0.0012 20.4 4.3 28 13-40 58-87 (91)
66 3vow_A Probable DNA DC->DU-edi 44.8 14 0.00048 25.2 2.5 21 14-34 95-115 (190)
67 3pro_C Alpha-lytic protease; P 44.6 33 0.0011 22.7 4.2 24 31-54 114-137 (166)
68 2v50_A Multidrug resistance pr 44.2 24 0.00081 28.9 4.1 50 20-69 159-212 (1052)
69 3lvj_C Sulfurtransferase TUSA; 43.6 44 0.0015 19.0 4.4 24 8-31 11-35 (82)
70 2y9j_Y Lipoprotein PRGK, prote 43.2 22 0.00076 23.4 3.2 21 20-40 90-110 (170)
71 4e6k_G BFD, bacterioferritin-a 42.4 8.7 0.0003 22.1 1.0 18 12-29 34-51 (73)
72 3v4k_A DNA DC->DU-editing enzy 42.1 15 0.00051 25.4 2.2 21 14-34 109-129 (203)
73 1vq3_A Phosphoribosylformylgly 40.7 58 0.002 19.5 6.0 57 9-69 23-82 (94)
74 2fy1_A RNA-binding motif prote 38.6 59 0.002 19.0 5.1 43 8-50 8-56 (116)
75 1gh8_A Translation elongation 37.9 24 0.00081 21.1 2.4 24 17-40 61-84 (89)
76 4dx5_A Acriflavine resistance 37.2 35 0.0012 27.9 4.1 48 20-67 159-210 (1057)
77 3qfa_C Thioredoxin; protein-pr 37.2 53 0.0018 18.7 4.0 30 13-42 40-72 (116)
78 2ytc_A PRE-mRNA-splicing facto 36.7 51 0.0017 17.7 5.8 64 10-78 15-79 (85)
79 4euy_A Uncharacterized protein 35.4 58 0.002 18.0 4.2 31 13-43 27-60 (105)
80 2ko1_A CTR148A, GTP pyrophosph 34.5 57 0.002 17.6 5.5 31 8-38 47-77 (88)
81 1pqx_A Conserved hypothetical 33.5 64 0.0022 19.2 3.9 42 21-64 39-82 (91)
82 3pim_A Peptide methionine sulf 32.4 44 0.0015 22.6 3.4 54 6-63 20-98 (187)
83 3ne5_A Cation efflux system pr 32.1 74 0.0025 26.0 5.2 53 20-72 704-762 (1054)
84 1x4e_A RNA binding motif, sing 30.9 65 0.0022 17.2 5.4 62 10-72 8-76 (85)
85 2z30_B TK-subtilisin; thermoco 30.4 65 0.0022 17.4 3.4 25 11-40 36-60 (65)
86 1f60_B Elongation factor EEF1B 30.3 48 0.0016 19.9 3.0 24 17-40 66-90 (94)
87 3q9p_A Heat shock protein beta 29.9 46 0.0016 18.9 2.8 25 29-53 14-40 (85)
88 2hzc_A Splicing factor U2AF 65 29.8 69 0.0023 17.1 4.6 38 13-50 13-61 (87)
89 1t1v_A SH3BGRL3, SH3 domain-bi 29.6 61 0.0021 18.1 3.3 28 13-41 9-41 (93)
90 1b64_A Elongation factor 1-bet 29.1 52 0.0018 19.6 3.0 25 17-41 63-88 (91)
91 3gzb_A Putative snoal-like pol 28.8 34 0.0012 22.5 2.2 23 28-50 118-140 (154)
92 2ct6_A SH3 domain-binding glut 27.8 54 0.0018 19.2 2.9 29 13-42 15-48 (111)
93 2go8_A Hypothetical protein YQ 26.7 1.1E+02 0.0036 19.0 4.3 76 5-82 13-95 (122)
94 1h75_A Glutaredoxin-like prote 24.6 75 0.0026 16.6 3.0 26 14-41 9-34 (81)
95 2y1y_A Alpha-crystallin B chai 24.5 49 0.0017 18.9 2.2 23 29-51 13-37 (90)
96 2wj5_A Heat shock protein beta 24.2 46 0.0016 19.5 2.1 24 29-52 18-43 (101)
97 1d1r_A Hypothetical 11.4 KD pr 23.9 1.2E+02 0.004 18.9 4.0 59 7-69 7-72 (116)
98 1wg1_A KIAA1579 protein, homol 23.8 96 0.0033 16.8 3.5 37 13-50 12-48 (88)
99 3mcb_A Nascent polypeptide-ass 23.8 75 0.0026 17.2 2.8 24 27-50 7-30 (54)
100 2ltl_A NIFU-like protein, mito 29.5 17 0.00057 23.0 0.0 46 21-68 61-109 (119)
101 2wz9_A Glutaredoxin-3; protein 23.7 1E+02 0.0036 18.4 3.8 30 13-42 41-73 (153)
102 1ego_A Glutaredoxin; electron 23.6 49 0.0017 17.5 2.0 27 14-41 9-39 (85)
103 2oe3_A Thioredoxin-3; electron 23.3 1.1E+02 0.0038 17.3 3.8 30 13-42 39-71 (114)
104 1okg_A Possible 3-mercaptopyru 23.0 50 0.0017 23.8 2.5 43 8-50 322-365 (373)
105 2cpj_A Non-POU domain-containi 22.4 1.1E+02 0.0037 16.9 6.1 42 10-51 18-60 (99)
106 1r7h_A NRDH-redoxin; thioredox 22.4 89 0.003 15.9 3.0 27 13-41 8-34 (75)
107 2pu9_C TRX-F, thioredoxin F-ty 22.2 1.1E+02 0.0037 16.8 3.5 29 13-41 33-64 (111)
108 4dvc_A Thiol:disulfide interch 22.1 30 0.001 21.2 1.0 19 13-31 30-51 (184)
109 2kzf_A RBFA, ribosome-binding 21.8 95 0.0032 18.5 3.2 36 32-67 37-73 (106)
110 3gla_A Low molecular weight he 21.7 44 0.0015 19.2 1.6 26 29-54 21-48 (100)
111 3g7s_A Long-chain-fatty-acid-- 21.6 2.4E+02 0.0082 20.6 6.7 50 21-70 452-510 (549)
112 3ctg_A Glutaredoxin-2; reduced 21.5 55 0.0019 19.8 2.1 19 13-31 44-62 (129)
113 2v50_A Multidrug resistance pr 21.4 76 0.0026 26.0 3.4 52 19-70 698-755 (1052)
114 2zzt_A Putative uncharacterize 21.2 66 0.0023 18.9 2.4 17 20-36 12-28 (107)
115 2zod_A Selenide, water dikinas 21.2 22 0.00074 25.3 0.2 19 13-31 16-39 (345)
116 1pav_A Hypothetical protein TA 21.1 27 0.00092 19.5 0.5 23 9-31 8-31 (78)
117 2fwh_A Thiol:disulfide interch 21.0 1.2E+02 0.0042 17.6 3.6 29 13-41 40-74 (134)
118 3gix_A Thioredoxin-like protei 20.5 1.5E+02 0.0052 17.8 4.3 35 8-42 26-65 (149)
119 2z51_A NIFU-like protein 2, ch 20.4 1.4E+02 0.0047 19.3 4.0 31 8-38 119-153 (154)
120 4fei_A Heat shock protein-rela 20.2 51 0.0017 19.2 1.7 23 29-51 23-47 (102)
No 1
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.54 E-value=5.9e-14 Score=80.81 Aligned_cols=60 Identities=12% Similarity=0.289 Sum_probs=50.0
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhh
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVK 65 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~ 65 (83)
++++.|.| ||+|++|+.+|+++|.+++||.++.+|+.+++++|.++.+ ..+...+.+.++
T Consensus 1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i~ 61 (74)
T 3dxs_X 1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPN-LVKEEDIKEEIE 61 (74)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTT-TCCHHHHHHHHH
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCC-CCCHHHHHHHHH
Confidence 36788999 9999999999999999999999999999999999999843 334445544443
No 2
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.52 E-value=2.9e-14 Score=81.84 Aligned_cols=55 Identities=13% Similarity=0.364 Sum_probs=46.5
Q ss_pred EEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHH
Q 034782 6 QEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAA 61 (83)
Q Consensus 6 ~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~ 61 (83)
.+..|.|||+|++|+.+|+++|.+++|| ++++|+.+++++|+++.+++.....|+
T Consensus 2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~ 56 (68)
T 3iwl_A 2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLK 56 (68)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHH
T ss_pred ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHH
Confidence 4677888999999999999999999999 999999999999998755544433333
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.51 E-value=1.8e-13 Score=77.66 Aligned_cols=58 Identities=24% Similarity=0.435 Sum_probs=49.5
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVK 65 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~ 65 (83)
+++.|.+ ||+|++|+.+|+++|.+++||.++++|+.+++++|.+ +...+...+.+.+.
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~--~~~~~~~~i~~~i~ 60 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSY--HGETTPQILTDAVE 60 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEE--CTTCCHHHHHHHHH
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEE--CCCCCHHHHHHHHH
Confidence 5788999 9999999999999999999999999999999999998 33445555555554
No 4
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.49 E-value=2e-13 Score=78.61 Aligned_cols=53 Identities=9% Similarity=0.289 Sum_probs=46.4
Q ss_pred CCceEEEEEEeeccChhHHHHHHHHhhcCC-CeeEEEEEccCCEEEEEecCCcc
Q 034782 2 ASLSQEVILAADLRCDRCQDRIANAISRVN-DVESMEVLVSEKKVILTYKSASE 54 (83)
Q Consensus 2 ~~~~~~~~l~V~M~C~~C~~~V~~aL~~i~-GV~~V~vdl~~~~V~V~~~~~~~ 54 (83)
|+++.+..|.|+|+|++|+.+|+++|.+++ ||.++++|+.+++++|.+..+.+
T Consensus 1 m~~m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~ 54 (73)
T 1cc8_A 1 MAEIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYD 54 (73)
T ss_dssp -CCCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHH
T ss_pred CCCceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHH
Confidence 345677889999999999999999999999 99999999999999999854433
No 5
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.43 E-value=1.3e-12 Score=72.94 Aligned_cols=59 Identities=24% Similarity=0.455 Sum_probs=48.1
Q ss_pred ceEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 4 LSQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 4 ~~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
|+++..|.+ ||+|++|+..|+++|.+++||.++++|+..++++|.++.. .....+...+
T Consensus 1 m~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~--~~~~~i~~~i 60 (71)
T 2xmw_A 1 MAQTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGE--TTPQILTDAV 60 (71)
T ss_dssp -CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC-----CHHHHHHHH
T ss_pred CCcEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC--CCHHHHHHHH
Confidence 356788999 8999999999999999999999999999999999999843 3444454444
No 6
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.41 E-value=2.4e-12 Score=72.49 Aligned_cols=63 Identities=22% Similarity=0.432 Sum_probs=52.5
Q ss_pred CCCceEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 1 MASLSQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 1 ~~~~~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
|...+.+..|.+ ||+|++|+..|+++|.+++||.++.+|+..++++|.++.. ......+...+
T Consensus 1 ~~~~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i 64 (76)
T 1opz_A 1 MLSEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPA-ETGTAAIQEKI 64 (76)
T ss_dssp CCCCCEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTT-TCCHHHHHHHH
T ss_pred CCccceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCC-CCCHHHHHHHH
Confidence 667788889999 9999999999999999999999999999999999999743 33334444433
No 7
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.40 E-value=7.5e-13 Score=76.62 Aligned_cols=46 Identities=20% Similarity=0.361 Sum_probs=43.5
Q ss_pred ceEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEec
Q 034782 4 LSQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYK 50 (83)
Q Consensus 4 ~~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~ 50 (83)
.+++.+|.| ||+|++|+.+|+++|.+ +||..+++|+.+++++|.++
T Consensus 3 ~m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~ 49 (73)
T 3fry_A 3 SVEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE 49 (73)
T ss_dssp CCEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG
T ss_pred ccEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC
Confidence 357788999 99999999999999999 99999999999999999998
No 8
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.39 E-value=4.1e-12 Score=71.16 Aligned_cols=59 Identities=22% Similarity=0.394 Sum_probs=49.0
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
+.+..|.+ ||+|++|+..|+++|.+++||.++.+|+..++++|.++. .......|...+
T Consensus 4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~-~~~~~~~i~~~i 63 (71)
T 2l3m_A 4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDS-SVVTLKDIVAVI 63 (71)
T ss_dssp EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEET-TTSCHHHHHHHH
T ss_pred cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECC-CCCCHHHHHHHH
Confidence 45678999 999999999999999999999999999999999999984 333444444444
No 9
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.37 E-value=7e-12 Score=68.62 Aligned_cols=58 Identities=16% Similarity=0.381 Sum_probs=47.5
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
.+..|.+ ||+|++|+..|+++|.+++||.++.+|+..++++|.++.. ......+...+
T Consensus 2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i 60 (69)
T 2qif_A 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDAD-KVSVKDIADAI 60 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT-TCCHHHHHHHH
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC-CCCHHHHHHHH
Confidence 3567899 8999999999999999999999999999999999999843 33334444433
No 10
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.37 E-value=4.7e-12 Score=70.90 Aligned_cols=58 Identities=26% Similarity=0.486 Sum_probs=48.3
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
++..|.+ ||+|++|+.+|+++|.+++||.++.+|+..++++|.++.. ......+...+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i 61 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDA-KTSVQKLTKAT 61 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETT-TCCHHHHHHHH
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCC-CCCHHHHHHHH
Confidence 4678999 9999999999999999999999999999999999999843 33344444443
No 11
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.36 E-value=9.1e-12 Score=70.71 Aligned_cols=58 Identities=21% Similarity=0.436 Sum_probs=48.1
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
.++.|.+ ||+|++|+.+|+++|.+++||.++.+|+..++++|.++.. ......+...+
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i 60 (75)
T 3cjk_B 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPK-LQTPKTLQEAI 60 (75)
T ss_dssp EEEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT-TCCHHHHHHHH
T ss_pred cEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCC-CCCHHHHHHHH
Confidence 4567899 9999999999999999999999999999999999999843 33344444443
No 12
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.35 E-value=4.8e-12 Score=70.87 Aligned_cols=58 Identities=21% Similarity=0.389 Sum_probs=48.0
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
++..|.+ ||+|++|+.+|+++|.+++||.++.+|+..++++|.++.. ......+.+.+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i 61 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPL-LTSPETLRGAI 61 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTT-TCCHHHHHHHH
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-cCCHHHHHHHH
Confidence 4678999 9999999999999999999999999999999999999843 23334444443
No 13
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.35 E-value=8.9e-12 Score=70.73 Aligned_cols=47 Identities=17% Similarity=0.467 Sum_probs=43.9
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecC
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKS 51 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~ 51 (83)
+.++.|.+ ||+|++|+.+|+++|.+++||.++.+|+..++++|.++.
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~ 49 (73)
T 1mwy_A 2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADN 49 (73)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESS
T ss_pred CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECC
Confidence 45678999 999999999999999999999999999999999999985
No 14
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.35 E-value=6.3e-12 Score=69.16 Aligned_cols=57 Identities=16% Similarity=0.448 Sum_probs=47.4
Q ss_pred EEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhh
Q 034782 7 EVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVK 65 (83)
Q Consensus 7 ~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~ 65 (83)
+..|.+ ||+|++|+.+|+++|.+++||.++.+|+..++++|.++.+. ....+.+.+.
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~--~~~~i~~~i~ 59 (66)
T 1yg0_A 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPA--TQDLIKEALL 59 (66)
T ss_dssp EEEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTC--CHHHHHHHHH
T ss_pred eEEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCC--CHHHHHHHHH
Confidence 356889 99999999999999999999999999999999999998543 3445554443
No 15
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.34 E-value=6e-12 Score=75.63 Aligned_cols=60 Identities=17% Similarity=0.376 Sum_probs=49.3
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVKN 66 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~~ 66 (83)
.++.|.| ||+|++|+.+|+++|.+++||.++++|+..++++|.++. ...+...|.+.+..
T Consensus 3 ~~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~-~~~~~~~i~~~i~~ 63 (90)
T 2g9o_A 3 STATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNA-SSVTPESLRKAIEA 63 (90)
T ss_dssp EEEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECC-SSCCTHHHHHHHHT
T ss_pred cEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECC-CCCCHHHHHHHHHh
Confidence 4567899 999999999999999999999999999999999999974 33344455555443
No 16
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.32 E-value=9.4e-12 Score=68.79 Aligned_cols=56 Identities=16% Similarity=0.497 Sum_probs=46.6
Q ss_pred EEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhh
Q 034782 9 ILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVK 65 (83)
Q Consensus 9 ~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~ 65 (83)
.|.+ ||+|++|+..|+++|.+++||.++.+|+..++++|.++. .......+...+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~-~~~~~~~i~~~i~ 59 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDE-ANVQATEICQAIN 59 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECT-TTCCHHHHHHHHH
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECC-CCCCHHHHHHHHH
Confidence 5788 999999999999999999999999999999999999984 3334445555443
No 17
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.30 E-value=1e-11 Score=71.27 Aligned_cols=59 Identities=20% Similarity=0.423 Sum_probs=49.1
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
..+..|.+ ||+|++|+.+|+++|.+++||.++.+|+..++++|.++.. ......+.+.+
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i 66 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPK-LQTPKTLQEAI 66 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTT-TCCHHHHHHHH
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCC-CCCHHHHHHHH
Confidence 45678999 9999999999999999999999999999999999999843 33344454444
No 18
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.30 E-value=4.9e-12 Score=72.47 Aligned_cols=59 Identities=19% Similarity=0.271 Sum_probs=48.6
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
++++.|.+ ||+|++|+.+|+++|.+++||.++.+|+..++++|.++.+ ......+.+.+
T Consensus 2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i 61 (77)
T 1y3j_A 2 SSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPA-VIQPPMIAEFI 61 (77)
T ss_dssp CEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTT-TSCHHHHHHHH
T ss_pred CEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCC-CCCHHHHHHHH
Confidence 45678999 9999999999999999999999999999999999999743 33334444443
No 19
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.30 E-value=1.4e-11 Score=69.44 Aligned_cols=58 Identities=12% Similarity=0.278 Sum_probs=47.5
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
.+..|.+ ||+|++|+.+|+++|.+++||.++++|+..++++|.++.. ......+...+
T Consensus 4 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i 62 (75)
T 1yjr_A 4 GVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPE-IIGPRDIIHTI 62 (75)
T ss_dssp CCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTT-TTHHHHHHHHH
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCC-CCCHHHHHHHH
Confidence 3567889 9999999999999999999999999999999999999843 23334444433
No 20
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.30 E-value=1.3e-11 Score=68.21 Aligned_cols=58 Identities=21% Similarity=0.401 Sum_probs=47.3
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
.+..|.+ ||+|++|+.+|+++|.+++||.++.+|+..++++|.++.. ......+...+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i 61 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPK-QVSEITIQERI 61 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTT-TCCTHHHHHHH
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCC-CCCHHHHHHHH
Confidence 4567899 9999999999999999999999999999999999999843 23333444433
No 21
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=1.4e-11 Score=75.87 Aligned_cols=50 Identities=20% Similarity=0.424 Sum_probs=44.5
Q ss_pred eEEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcc
Q 034782 5 SQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASE 54 (83)
Q Consensus 5 ~~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~ 54 (83)
..++.|.|.|+|++|+.+|+++|.+++||.++++|+..++++|.++.+.+
T Consensus 18 ~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~ 67 (98)
T 2crl_A 18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQ 67 (98)
T ss_dssp CEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHH
T ss_pred ceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHH
Confidence 35567888899999999999999999999999999999999999864433
No 22
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.27 E-value=5.6e-12 Score=68.97 Aligned_cols=43 Identities=21% Similarity=0.497 Sum_probs=40.4
Q ss_pred EEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEec
Q 034782 8 VILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYK 50 (83)
Q Consensus 8 ~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~ 50 (83)
..|.+ ||+|++|+.+|+++|.+++||.++++|+..++++|.+.
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~ 46 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA 46 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECS
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEec
Confidence 46889 99999999999999999999999999999999999864
No 23
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.27 E-value=2.6e-11 Score=67.64 Aligned_cols=55 Identities=22% Similarity=0.343 Sum_probs=46.4
Q ss_pred EEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhh
Q 034782 9 ILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVK 65 (83)
Q Consensus 9 ~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~ 65 (83)
.|.+ ||+|++|+.+|+++|.+++||.++++|+..++++|.++.. .....+...+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~--~~~~~i~~~i~ 58 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPG--TSPDALTAAVA 58 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTT--SCHHHHHHHHH
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCC--CCHHHHHHHHH
Confidence 4788 9999999999999999999999999999999999999853 34445555543
No 24
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.26 E-value=2.3e-11 Score=68.01 Aligned_cols=56 Identities=20% Similarity=0.416 Sum_probs=46.5
Q ss_pred EEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 7 EVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 7 ~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
+..|.+ ||+|++|+.+|+++|.+++||.++.+|+..++++|.++ .. .....+...+
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~~-~~~~~i~~~i 59 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-NE-VTADSIKEII 59 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-TT-SCHHHHHHHH
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-CC-CCHHHHHHHH
Confidence 467889 99999999999999999999999999999999999997 32 3334444443
No 25
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.26 E-value=1.7e-11 Score=71.98 Aligned_cols=59 Identities=14% Similarity=0.348 Sum_probs=48.6
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
..++.|.+ ||+|++|+.+|+++|.+++||.++++|+..++++|.++.. ......+.+.+
T Consensus 8 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i 67 (84)
T 1q8l_A 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPH-LISVEEMKKQI 67 (84)
T ss_dssp CEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTT-TCCHHHHHHHH
T ss_pred ceEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCC-CCCHHHHHHHH
Confidence 34678899 9999999999999999999999999999999999999743 33334444443
No 26
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.26 E-value=2.1e-11 Score=69.59 Aligned_cols=58 Identities=17% Similarity=0.391 Sum_probs=47.6
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHh
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVG 63 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~ 63 (83)
+.+..|.+ ||+|++|+..|+++|.+++||.++.+|+..++++|.++.. ......+...
T Consensus 2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~ 60 (80)
T 1jww_A 2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPK-EASVSDLKEA 60 (80)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTT-TCCHHHHHHH
T ss_pred ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCC-CCCHHHHHHH
Confidence 35677999 9999999999999999999999999999999999999743 2333344443
No 27
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.25 E-value=3.2e-11 Score=68.20 Aligned_cols=47 Identities=15% Similarity=0.385 Sum_probs=43.6
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecC
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKS 51 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~ 51 (83)
..+..|.+ ||+|++|+.+|+++|.+++||.++++|+..++++|.++.
T Consensus 2 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~ 49 (71)
T 2aj0_A 2 AEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEA 49 (71)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESC
T ss_pred CeEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecC
Confidence 34678899 899999999999999999999999999999999999875
No 28
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.25 E-value=3.7e-11 Score=74.96 Aligned_cols=59 Identities=17% Similarity=0.355 Sum_probs=48.8
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
+.++.|.| ||+|++|+.+|+++|.+++||.++++|+..++++|.++. ...+...|.+.+
T Consensus 7 ~~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~-~~~~~~~i~~~i 66 (111)
T 2ofg_X 7 LKTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDP-KQVSEITIQERI 66 (111)
T ss_dssp CEEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECT-TTCSHHHHHHHH
T ss_pred ceEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECC-CCCCHHHHHHHH
Confidence 35678999 999999999999999999999999999999999999984 333344444443
No 29
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.23 E-value=1e-11 Score=74.63 Aligned_cols=48 Identities=17% Similarity=0.290 Sum_probs=43.3
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCC
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSA 52 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~ 52 (83)
..+..|.| ||+|++|+.+|+++|.+++||.++++|+..++++|.++.+
T Consensus 21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~ 69 (85)
T 2k2p_A 21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSD 69 (85)
T ss_dssp -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCC
T ss_pred ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCC
Confidence 45678999 9999999999999999999999999999999999997543
No 30
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.22 E-value=1.7e-11 Score=68.49 Aligned_cols=53 Identities=19% Similarity=0.402 Sum_probs=43.5
Q ss_pred EEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhh
Q 034782 9 ILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVK 65 (83)
Q Consensus 9 ~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~ 65 (83)
.|.+ ||+|++|+.+|+++|.+++||.++++|+..++++|. ...+...+.+.+.
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~----~~~~~~~i~~~i~ 56 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVE----GTADPKALVQAVE 56 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEEC----SCCCHHHHHHHHH
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEEC----CCCCHHHHHHHHH
Confidence 5788 899999999999999999999999999999999992 2234445555443
No 31
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.22 E-value=4.5e-11 Score=75.66 Aligned_cols=59 Identities=14% Similarity=0.325 Sum_probs=49.1
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVK 65 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~ 65 (83)
.++.|.| ||+|++|+.+|+++|.+++||.++++|+..++++|.++. .....+.|.+.+.
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~-~~~~~~~i~~~i~ 139 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDP-EIIGPRDIIKIIE 139 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCT-TTSCHHHHHHHHH
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECC-CCCCHHHHHHHHH
Confidence 4678999 999999999999999999999999999999999999984 3334445544443
No 32
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.20 E-value=3.8e-11 Score=67.34 Aligned_cols=44 Identities=34% Similarity=0.643 Sum_probs=41.0
Q ss_pred EEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCC
Q 034782 8 VILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSA 52 (83)
Q Consensus 8 ~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~ 52 (83)
..|.+ ||+|++|+.+|+++|.++ ||.++.+|+..++++|.++.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~ 47 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL 47 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH
Confidence 56889 999999999999999999 999999999999999998743
No 33
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.19 E-value=5.4e-11 Score=75.75 Aligned_cols=59 Identities=19% Similarity=0.401 Sum_probs=49.6
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVK 65 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~ 65 (83)
.++.|.| ||+|++|+.+|+++|.+++||.++++|+..++++|.+++ .....+.|.+.+.
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~-~~~~~~~i~~~i~ 133 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNP-KEASVSDLKEAVD 133 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECT-TTCCHHHHHHHHH
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECC-CCCCHHHHHHHHH
Confidence 4678999 999999999999999999999999999999999999984 3344455555443
No 34
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.16 E-value=2e-10 Score=68.92 Aligned_cols=48 Identities=21% Similarity=0.324 Sum_probs=44.3
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCC
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSA 52 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~ 52 (83)
+....|.| ||+|++|+..|+++|.+++||.++.+|+..++++|.++..
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~ 63 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSL 63 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTT
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCC
Confidence 45678999 9999999999999999999999999999999999999743
No 35
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.12 E-value=3.9e-10 Score=75.91 Aligned_cols=58 Identities=19% Similarity=0.407 Sum_probs=48.6
Q ss_pred EEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 6 QEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 6 ~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
.++.|.| ||+|++|+.+|+++|.+++||.++.+|+..++++|.++. .......|...+
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~-~~~~~~~i~~~i 180 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNP-AVISPEELRAAI 180 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECT-TTCCHHHHHHHH
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECC-CCCCHHHHHHHH
Confidence 4678999 999999999999999999999999999999999999974 333444454444
No 36
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.10 E-value=3.4e-10 Score=71.54 Aligned_cols=47 Identities=21% Similarity=0.396 Sum_probs=44.0
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecC
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKS 51 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~ 51 (83)
++++.|.| ||+|++|+.+|+++|.+++||.++.+|+..+++.|.++.
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~ 50 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDP 50 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECT
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcC
Confidence 46678999 999999999999999999999999999999999999974
No 37
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.06 E-value=5.4e-10 Score=75.25 Aligned_cols=61 Identities=18% Similarity=0.311 Sum_probs=49.9
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhhh
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVKN 66 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~~ 66 (83)
+.++.|.| ||+|++|+.+|+++|.+++||.++.+|+..++++|.++.. ......+...+..
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~-~~~~~~i~~~i~~ 80 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPS-CTSPVALQRAIEA 80 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTT-TCCHHHHHHHHTT
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCC-CCCHHHHHHHHHH
Confidence 45678999 9999999999999999999999999999999999999743 3344455555543
No 38
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.01 E-value=9.9e-10 Score=77.15 Aligned_cols=60 Identities=13% Similarity=0.236 Sum_probs=49.4
Q ss_pred ceEEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHh
Q 034782 4 LSQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVG 63 (83)
Q Consensus 4 ~~~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~ 63 (83)
...+++|.|.|+|++|+.+|+++|.+++||.++++|+.+++++|.+..+.+...+.|++.
T Consensus 4 ~~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~ 63 (222)
T 1qup_A 4 DTYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNC 63 (222)
T ss_dssp GCEEEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHT
T ss_pred cceEEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHc
Confidence 345677888899999999999999999999999999999999999865544444444443
No 39
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.95 E-value=5.1e-09 Score=66.47 Aligned_cols=49 Identities=22% Similarity=0.487 Sum_probs=44.7
Q ss_pred CceEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecC
Q 034782 3 SLSQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKS 51 (83)
Q Consensus 3 ~~~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~ 51 (83)
....+..|.+ ||+|++|+.+|+++|.+++||.++.+|+..++++|.++.
T Consensus 3 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~ 52 (151)
T 1p6t_A 3 SEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDP 52 (151)
T ss_dssp CCCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECT
T ss_pred CcceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcC
Confidence 4456678999 999999999999999999999999999999999999874
No 40
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=98.91 E-value=3.3e-09 Score=75.76 Aligned_cols=58 Identities=14% Similarity=0.278 Sum_probs=47.6
Q ss_pred eEEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHH
Q 034782 5 SQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAV 62 (83)
Q Consensus 5 ~~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~ 62 (83)
..++.|.|.|+|++|+.+|+++|.+++||.++++|+.+++++|.+..+.+...+.|++
T Consensus 6 ~~~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~ 63 (249)
T 1jk9_B 6 TYEATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRN 63 (249)
T ss_dssp CEEEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHT
T ss_pred ceeEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHH
Confidence 3456788889999999999999999999999999999999999976544444444433
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.87 E-value=5.9e-09 Score=82.92 Aligned_cols=57 Identities=14% Similarity=0.305 Sum_probs=47.2
Q ss_pred EEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhh
Q 034782 7 EVILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGV 64 (83)
Q Consensus 7 ~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~ 64 (83)
++.|.+ ||+|++|+.+|+++|.++|||.++++|+.+++++|+++.. ..+.+++.+.+
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~-~~~~~~i~~ai 60 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEK-RIDFETIKRVI 60 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTT-TCCHHHHHHHH
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCC-cCCHHHHHHHH
Confidence 357889 9999999999999999999999999999999999999843 33344444443
No 42
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=93.48 E-value=0.064 Score=32.71 Aligned_cols=53 Identities=21% Similarity=0.261 Sum_probs=35.8
Q ss_pred EEEEEeeccChhHH------HHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhhhcc
Q 034782 7 EVILAADLRCDRCQ------DRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVKNNQ 68 (83)
Q Consensus 7 ~~~l~V~M~C~~C~------~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~~~~ 68 (83)
.+.+.+.+++++|. ..|+++|.+++||.+|+|++ + .++.++..++.+..+..|
T Consensus 42 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l-------~--~~p~W~~~~~s~~~r~~l 100 (103)
T 3cq1_A 42 RAYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEV-------T--FEPPWTLARLSEKARRLL 100 (103)
T ss_dssp EEEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEE-------C--CSSCCCGGGCCSGGGTTT
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEE-------e--cCCCCChHHCCHHHHHHc
Confidence 34566677777774 57899999999999887663 3 345555566655555544
No 43
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=92.54 E-value=0.075 Score=32.35 Aligned_cols=53 Identities=15% Similarity=0.301 Sum_probs=33.9
Q ss_pred EEEEEeeccChhHH------HHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhhhcc
Q 034782 7 EVILAADLRCDRCQ------DRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVKNNQ 68 (83)
Q Consensus 7 ~~~l~V~M~C~~C~------~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~~~~ 68 (83)
.+.+.+.++.++|. ..|+++|.+++||.+|+|++ ++ ++.++..++.+..+..|
T Consensus 43 ~V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l-------~~--~p~W~~~~~s~~~r~~l 101 (103)
T 1uwd_A 43 NVKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVEL-------TF--DPPWTPERMSPELREKF 101 (103)
T ss_dssp EEEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEE-------CC--SSCCCGGGSCHHHHHHH
T ss_pred EEEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEE-------ec--CCCCChHHCCHHHHHHc
Confidence 34556666666664 46889999999999887663 33 44555555555554443
No 44
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=90.85 E-value=0.26 Score=30.31 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=33.2
Q ss_pred EEEEeeccChhH------HHHHHHHh-hcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhhhcc
Q 034782 8 VILAADLRCDRC------QDRIANAI-SRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVKNNQ 68 (83)
Q Consensus 8 ~~l~V~M~C~~C------~~~V~~aL-~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~~~~ 68 (83)
+.+.+.++.++| ...|+.+| .+++||.+|+|++. + .+.++..++.+-.+..|
T Consensus 46 V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~-------~--~p~W~~~~~s~~~r~~l 104 (108)
T 3lno_A 46 AVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVV-------W--NPPWSKERMSRMAKIAL 104 (108)
T ss_dssp EEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEEC-------C--SSCCCGGGSCHHHHHHH
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEE-------e--cCCCChHHCCHHHHHHc
Confidence 455566777777 56789999 89999987765443 3 44444555544444433
No 45
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=87.99 E-value=2.1 Score=28.74 Aligned_cols=54 Identities=13% Similarity=0.137 Sum_probs=37.9
Q ss_pred ceEEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCC---------------EEEEEecCCcccchHHHHHh
Q 034782 4 LSQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEK---------------KVILTYKSASEESSGKAAVG 63 (83)
Q Consensus 4 ~~~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~---------------~V~V~~~~~~~~~~~~i~~~ 63 (83)
|.++++|. +-|==| ++....+++||.++.+=...+ .|.|.+| |..++.+.|-++
T Consensus 1 Mte~A~fa--gGCFWg---~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yD-p~~isy~~LL~~ 69 (168)
T 4gwb_A 1 MTKRAVLA--GGCFWG---MQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFD-PERISYRRILEL 69 (168)
T ss_dssp -CEEEEEE--ESCHHH---HHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEEC-TTTCCHHHHHHH
T ss_pred CceEEEEE--ccCccc---hHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEEC-CCCCCHHHHHHH
Confidence 45677775 445444 667778899999999877654 7899998 566666665444
No 46
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=85.20 E-value=3.5 Score=24.95 Aligned_cols=38 Identities=8% Similarity=0.093 Sum_probs=29.2
Q ss_pred hhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcc
Q 034782 17 DRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASE 54 (83)
Q Consensus 17 ~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~ 54 (83)
++=...|.++|.++||++--.++-..+++.|+-+.+..
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~ 53 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDS 53 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCH
Confidence 34478899999999999533456668899998887764
No 47
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=78.89 E-value=7.3 Score=26.92 Aligned_cols=53 Identities=21% Similarity=0.120 Sum_probs=36.3
Q ss_pred eEEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccC---------------CEEEEEecCCcccchHHHHHh
Q 034782 5 SQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSE---------------KKVILTYKSASEESSGKAAVG 63 (83)
Q Consensus 5 ~~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~---------------~~V~V~~~~~~~~~~~~i~~~ 63 (83)
.++++|. +-|==| ++....+++||.++.+=... ..|.|.|| |..++.++|-++
T Consensus 25 ~~~a~fa--gGCFWg---~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yD-p~~iSy~~LL~~ 92 (203)
T 1nwa_A 25 NQKAILA--GGCFWG---LQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFD-PTVTDYRTLLEF 92 (203)
T ss_dssp CEEEEEE--ESCHHH---HHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEEC-TTTCCHHHHHHH
T ss_pred cceEEEe--cCCeee---eHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEEC-CCcCCHHHHHHH
Confidence 3556664 555555 55667788999999886654 36889998 556666666554
No 48
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=72.36 E-value=15 Score=25.17 Aligned_cols=53 Identities=13% Similarity=0.083 Sum_probs=36.5
Q ss_pred eEEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCCE-------------------EEEEecCCcccchHHHHHh
Q 034782 5 SQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEKK-------------------VILTYKSASEESSGKAAVG 63 (83)
Q Consensus 5 ~~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~-------------------V~V~~~~~~~~~~~~i~~~ 63 (83)
++++.| ++-|==|. +....+++||.++.+=...+. |.|.|| +..++.++|-++
T Consensus 43 ~~~a~f--agGCFWg~---E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yD-p~~isy~~LL~~ 114 (199)
T 1fvg_A 43 TQMAVF--GMGCFWGA---ERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQ-PEHISFEELLKV 114 (199)
T ss_dssp CEEEEE--EESSHHHH---HHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEEC-TTTSCHHHHHHH
T ss_pred ceEEEE--ecCCeeee---HHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEEC-CCcCCHHHHHHH
Confidence 345555 46666665 555677899999998776654 999998 555666666554
No 49
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=70.95 E-value=14 Score=25.23 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=35.6
Q ss_pred EEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCCE-------------------EEEEecCCcccchHHHHHh
Q 034782 6 QEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEKK-------------------VILTYKSASEESSGKAAVG 63 (83)
Q Consensus 6 ~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~-------------------V~V~~~~~~~~~~~~i~~~ 63 (83)
+++.| ++-|==|. +....+++||.++.+=...+. |.|.+| |..++.+.|-++
T Consensus 3 ~~a~f--agGCFWg~---E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yD-p~~isy~~LL~~ 73 (193)
T 3bqh_A 3 RTIYL--AGGCFWGL---EAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYD-ADKLSLDDILQY 73 (193)
T ss_dssp EEEEE--EESCHHHH---HHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEE-TTTCCHHHHHHH
T ss_pred cEEEE--ecCCeeeh---HHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEEC-CCcCCHHHHHHH
Confidence 45555 45566665 555678899999988766553 899998 566666666554
No 50
>1yj7_A ESCJ; mixed alpha/beta, extended linker, protein transport; 1.80A {Escherichia coli}
Probab=70.85 E-value=16 Score=24.19 Aligned_cols=50 Identities=18% Similarity=0.199 Sum_probs=33.0
Q ss_pred HHHHHHHhhcCCCeeEEEEEc---------cCCEEEEEecCCcccchH--HHHHhhhhccc
Q 034782 20 QDRIANAISRVNDVESMEVLV---------SEKKVILTYKSASEESSG--KAAVGVKNNQS 69 (83)
Q Consensus 20 ~~~V~~aL~~i~GV~~V~vdl---------~~~~V~V~~~~~~~~~~~--~i~~~~~~~~~ 69 (83)
...+++.|..++||.+++|.+ ++..|.|+..+....... .|..++..+..
T Consensus 92 egELartI~~i~~V~~ARVhl~lP~~~~~~~sASV~l~~~~g~~l~~~q~~I~~LVa~SV~ 152 (171)
T 1yj7_A 92 EQDIERLLSKIPGVIDCSVSLNVNNNESQPSSAAVLVISSPEVNLAPSVIQIKNLVKNSVD 152 (171)
T ss_dssp HHHHHHHHTTSTTEEEEEEEEEC-------CEEEEEEEECTTCCCGGGHHHHHHHHHHHST
T ss_pred HHHHHHHHHcCCCeeEEEEEEECCCCCCCCceEEEEEEeCCCCCCcHhHHHHHHHHHHhcC
Confidence 567899999999999999875 344677777644433333 35555555543
No 51
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=69.12 E-value=14 Score=27.10 Aligned_cols=53 Identities=23% Similarity=0.203 Sum_probs=37.0
Q ss_pred eEEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCCE-----------------EEEEecCCcccchHHHHHh
Q 034782 5 SQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEKK-----------------VILTYKSASEESSGKAAVG 63 (83)
Q Consensus 5 ~~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~-----------------V~V~~~~~~~~~~~~i~~~ 63 (83)
+++++|. +-|==| ++....+++||.++.+=...+. |.|.+| |..++.++|-++
T Consensus 2 ~~~a~fa--gGCFWg---~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yD-p~~isy~~LL~~ 71 (313)
T 3e0m_A 2 MAEIYLA--GGCFWG---LEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYD-EKEVSLREILLY 71 (313)
T ss_dssp CEEEEEE--CSCHHH---HHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEEC-TTTSCHHHHHHH
T ss_pred ccEEEEe--cCCchh---hHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEEC-CCcCCHHHHHHH
Confidence 4556664 555555 5666778899999998776654 899998 666666666554
No 52
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=67.43 E-value=23 Score=24.50 Aligned_cols=53 Identities=13% Similarity=-0.031 Sum_probs=36.3
Q ss_pred eEEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCC-------------------EEEEEecCCcccchHHHHHh
Q 034782 5 SQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEK-------------------KVILTYKSASEESSGKAAVG 63 (83)
Q Consensus 5 ~~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~-------------------~V~V~~~~~~~~~~~~i~~~ 63 (83)
++++.| ++-|==|. +....+++||.++.+=...+ .|.|.|| +..++.++|-++
T Consensus 42 ~~~a~f--agGCFWg~---E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yD-p~~isy~~LL~~ 113 (211)
T 1ff3_A 42 MEIAIF--AMGXFWGV---ERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD-PSVISYEQLLQV 113 (211)
T ss_dssp CEEEEE--ECSSHHHH---HHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEEC-TTTSCHHHHHHH
T ss_pred ceEEEE--ecCCeEEe---hhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEEC-CCcCCHHHHHHH
Confidence 345555 56666665 55567789999999877643 4999998 566666666554
No 53
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=65.34 E-value=22 Score=25.51 Aligned_cols=53 Identities=23% Similarity=0.095 Sum_probs=36.6
Q ss_pred eEEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCCE-------------------EEEEecCCcccchHHHHHh
Q 034782 5 SQEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEKK-------------------VILTYKSASEESSGKAAVG 63 (83)
Q Consensus 5 ~~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~-------------------V~V~~~~~~~~~~~~i~~~ 63 (83)
.+++.| ++-|==|. |+...+++||.++.+=...+. |.|.|| +..++.++|-++
T Consensus 94 ~e~a~f--AgGCFWgv---E~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YD-P~~ISy~~LL~~ 165 (261)
T 2j89_A 94 QQFAQF--GAGCFWGV---ELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYD-PKECSFDTLIDV 165 (261)
T ss_dssp CEEEEE--EESSHHHH---HHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEEC-TTTSCHHHHHHH
T ss_pred CeEEEE--ecCCeeee---HHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEEC-CCcCCHHHHHHH
Confidence 455555 46666665 555677899999998776653 999998 556666666554
No 54
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=62.54 E-value=9.4 Score=22.99 Aligned_cols=29 Identities=10% Similarity=0.138 Sum_probs=23.8
Q ss_pred CceEEEEEEe-eccChhHHHHHHHHhhcCC
Q 034782 3 SLSQEVILAA-DLRCDRCQDRIANAISRVN 31 (83)
Q Consensus 3 ~~~~~~~l~V-~M~C~~C~~~V~~aL~~i~ 31 (83)
.|....++.+ |+.|+.-.-++.++|.+++
T Consensus 23 ~m~~~~~LD~rGl~CP~PvlktkkaL~~l~ 52 (97)
T 1je3_A 23 NIVPDYRLDMVGEPCPYPAVATLEAMPQLK 52 (97)
T ss_dssp CCCEEEEECSBCCSSSSSTHHHHHHTTTCC
T ss_pred cCCcCeEEeCCCCCCCHHHHHHHHHHHcCC
Confidence 3444566787 9999999999999999875
No 55
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=62.29 E-value=14 Score=22.17 Aligned_cols=25 Identities=12% Similarity=0.112 Sum_probs=21.7
Q ss_pred EEEEEe-eccChhHHHHHHHHhhcCC
Q 034782 7 EVILAA-DLRCDRCQDRIANAISRVN 31 (83)
Q Consensus 7 ~~~l~V-~M~C~~C~~~V~~aL~~i~ 31 (83)
..++.+ |+.|+.-.-++.++|.+++
T Consensus 26 ~~~LD~rGl~CP~Pvl~tkkaL~~l~ 51 (98)
T 1jdq_A 26 TKTLDVRGEVCPVPDVETKRALQNMK 51 (98)
T ss_dssp CEEEECSSCCSSHHHHHHHHHHHTCC
T ss_pred CEEEeCCCCCCCHHHHHHHHHHHhCC
Confidence 356788 9999999999999999875
No 56
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=58.33 E-value=6.4 Score=26.64 Aligned_cols=31 Identities=23% Similarity=0.497 Sum_probs=24.3
Q ss_pred EEEEe-eccChhHHHHHHHHhhcCCCeeEEEE
Q 034782 8 VILAA-DLRCDRCQDRIANAISRVNDVESMEV 38 (83)
Q Consensus 8 ~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~v 38 (83)
.++=| --.|..|+..|-.+|.+-+||..|-+
T Consensus 85 ~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~ 116 (190)
T 2nyt_A 85 VTWYVSSSPCAACADRIIKTLSKTKNLRLLIL 116 (190)
T ss_pred eEEEEEcChHHHHHHHHHHhhhhcCCccEEEE
Confidence 34444 34599999999999999999987654
No 57
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=56.27 E-value=24 Score=22.00 Aligned_cols=46 Identities=15% Similarity=0.275 Sum_probs=38.5
Q ss_pred EEEEEe-eccCh-hHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCC
Q 034782 7 EVILAA-DLRCD-RCQDRIANAISRVNDVESMEVLVSEKKVILTYKSA 52 (83)
Q Consensus 7 ~~~l~V-~M~C~-~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~ 52 (83)
-..+.| |+... -+...|+..++....|..|++.....+.-|++..+
T Consensus 18 G~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~ 65 (121)
T 1owx_A 18 GCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEK 65 (121)
T ss_dssp CCEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSC
T ss_pred CeEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCC
Confidence 345666 66666 77999999999999999999999999999999854
No 58
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=54.82 E-value=23 Score=21.87 Aligned_cols=58 Identities=9% Similarity=0.146 Sum_probs=34.1
Q ss_pred eEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEc-----cCC--EEEEEecCCcccchHHHHHhhhh
Q 034782 5 SQEVILAA-DLRCDRCQDRIANAISRVNDVESMEVLV-----SEK--KVILTYKSASEESSGKAAVGVKN 66 (83)
Q Consensus 5 ~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl-----~~~--~V~V~~~~~~~~~~~~i~~~~~~ 66 (83)
.++++|-| .-+-+. .-.+.+.|.+++||..|.+.+ .+. +++|+++ +..-..|++++.+
T Consensus 6 iRRlVLDVlKPh~P~-ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~---dIdfd~I~~~IE~ 71 (100)
T 3bpd_A 6 LRRLVLDVLKPHEPK-TIVFALKLSELENVDGVNIHLSEIDQATENIKITILGN---NLDYEQIKGVIED 71 (100)
T ss_dssp EEEEEEEEEEESCSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEE---EECHHHHHHHHHT
T ss_pred ceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec---CCCHHHHHHHHHH
Confidence 35566666 334444 567888999999998876543 333 4555555 2333445555443
No 59
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis}
Probab=54.17 E-value=17 Score=21.90 Aligned_cols=47 Identities=9% Similarity=0.013 Sum_probs=31.2
Q ss_pred HHHHHHhhcCCCeeEEEEEccCCEEEEEecCC--cccchHHHHHhhhhccc
Q 034782 21 DRIANAISRVNDVESMEVLVSEKKVILTYKSA--SEESSGKAAVGVKNNQS 69 (83)
Q Consensus 21 ~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~--~~~~~~~i~~~~~~~~~ 69 (83)
.-+.+.|-+++||.+|- +...-++|+-+.+ ++...-+|..++.+.+.
T Consensus 39 SPLA~~LF~i~gVk~Vf--~g~dFITVtK~~~~dW~~ikp~I~~~I~~~~~ 87 (94)
T 2k1h_A 39 PEFINRLFEIEGVKSIF--YVLDFISIDKEDNANWNELLPQIENTFAKSNL 87 (94)
T ss_dssp CHHHHHHHTSTTEEEEE--EETTEEEEEECTTCCHHHHHHHHHHHHHHHC-
T ss_pred CHHHHHhhCCCCeeEEE--EeCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 34666777999999664 5577899987644 45555566666665553
No 60
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=53.62 E-value=18 Score=21.11 Aligned_cols=22 Identities=18% Similarity=0.223 Sum_probs=19.6
Q ss_pred EEe-eccChhHHHHHHHHhhcCC
Q 034782 10 LAA-DLRCDRCQDRIANAISRVN 31 (83)
Q Consensus 10 l~V-~M~C~~C~~~V~~aL~~i~ 31 (83)
+.+ |+.|+.-.-+++++|.+++
T Consensus 4 lD~rGl~CP~Pvl~~kkal~~l~ 26 (87)
T 3hz7_A 4 IDALGQVCPIPVIRAKKALAELG 26 (87)
T ss_dssp EECTTCCTTHHHHHHHHHHHTTG
T ss_pred EEcCCCCCCHHHHHHHHHHHhcc
Confidence 566 9999999999999999983
No 61
>2hiy_A Hypothetical protein; COG3797, structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GOL; 1.40A {Streptococcus pneumoniae} SCOP: d.356.1.1
Probab=50.57 E-value=31 Score=22.83 Aligned_cols=48 Identities=8% Similarity=0.141 Sum_probs=39.4
Q ss_pred HHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhhhcc
Q 034782 20 QDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVKNNQ 68 (83)
Q Consensus 20 ~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~~~~ 68 (83)
-..+.+.+..+ |-++|+.-+.++-|..+.+.+.+....+|+..+.+.+
T Consensus 24 MadLr~~l~~l-Gf~~V~TyI~SGNvvF~s~~~~~~l~~~ie~~l~~~f 71 (183)
T 2hiy_A 24 MAELRQELTNL-GLEKVESYINSGNIFFTSIDSKAQLVEKLETFFAVHY 71 (183)
T ss_dssp HHHHHHHHHHH-TCEEEEEETTTTEEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHc-CCccceEEEecCCEEEecCCCHHHHHHHHHHHHHHhc
Confidence 34566777766 8899999999999999998755777888999988887
No 62
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=50.44 E-value=41 Score=20.60 Aligned_cols=46 Identities=20% Similarity=0.314 Sum_probs=32.2
Q ss_pred ceEEEEEEe--eccChhHHHHHHHHhhcCCCeeEEEEEc-----cCC--EEEEEec
Q 034782 4 LSQEVILAA--DLRCDRCQDRIANAISRVNDVESMEVLV-----SEK--KVILTYK 50 (83)
Q Consensus 4 ~~~~~~l~V--~M~C~~C~~~V~~aL~~i~GV~~V~vdl-----~~~--~V~V~~~ 50 (83)
..++++|-| ++|-+. .-.+.+.|.+++||..|.+.+ .+. +++|+++
T Consensus 3 ~irRlVLDVlKP~h~P~-ivd~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~ 57 (96)
T 2x3d_A 3 AIRRLVLDVLKPIRGTS-IVDLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGT 57 (96)
T ss_dssp CEEEEEEEEEEESSSSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEES
T ss_pred ceEEEEEEcccCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec
Confidence 466777877 456666 667888999999998876543 333 5566665
No 63
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=49.17 E-value=6.5 Score=24.77 Aligned_cols=28 Identities=21% Similarity=0.189 Sum_probs=20.1
Q ss_pred EEEEEccCCEEEEEecCCcccchHHHHH
Q 034782 35 SMEVLVSEKKVILTYKSASEESSGKAAV 62 (83)
Q Consensus 35 ~V~vdl~~~~V~V~~~~~~~~~~~~i~~ 62 (83)
.++|....+.|++++..+.....++++.
T Consensus 78 ~i~V~V~~g~VtLsG~v~s~~~r~~a~~ 105 (132)
T 2kgs_A 78 DFGLKVERDTVTLTGTAPSSEHKDAVKR 105 (132)
T ss_dssp TCEEEEEETEEEEECEESSHHHHHHHHH
T ss_pred ceEEEEECCEEEEEEEECCHHHHHHHHH
Confidence 4456667888888888777666666666
No 64
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=47.55 E-value=47 Score=20.38 Aligned_cols=58 Identities=12% Similarity=0.090 Sum_probs=34.0
Q ss_pred ceEEEEEEe-eccChhHHHHHHHHhhcCCCeeEEEE-----EccCC--EEEEEecCCcccchHHHHHhhh
Q 034782 4 LSQEVILAA-DLRCDRCQDRIANAISRVNDVESMEV-----LVSEK--KVILTYKSASEESSGKAAVGVK 65 (83)
Q Consensus 4 ~~~~~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~v-----dl~~~--~V~V~~~~~~~~~~~~i~~~~~ 65 (83)
..++++|-| .-|-+. .-.+.+.|.+++||..|.+ |..+. +++|+|+ ...-..|.+++.
T Consensus 5 ~irRlVLDVlKPh~p~-i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~---~id~d~I~~~IE 70 (97)
T 2raq_A 5 GLIRIVLDILKPHEPI-IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGN---DLDFDEITRAIE 70 (97)
T ss_dssp SEEEEEEEEECCSCSC-HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECS---SCCHHHHHHHHH
T ss_pred CceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec---CCCHHHHHHHHH
Confidence 345667776 334444 5678888999999887754 34444 4455554 233334444444
No 65
>2yy3_A Elongation factor 1-beta; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 2.50A {Pyrococcus horikoshii}
Probab=46.26 E-value=36 Score=20.37 Aligned_cols=28 Identities=32% Similarity=0.306 Sum_probs=21.6
Q ss_pred eccChh--HHHHHHHHhhcCCCeeEEEEEc
Q 034782 13 DLRCDR--CQDRIANAISRVNDVESMEVLV 40 (83)
Q Consensus 13 ~M~C~~--C~~~V~~aL~~i~GV~~V~vdl 40 (83)
-|.... -...+++.+++++||+++++..
T Consensus 58 vveD~~~~~tD~lee~i~~~e~VqSvdV~~ 87 (91)
T 2yy3_A 58 LGRDEEGYSFDEVAEKFEEVENVESAEVET 87 (91)
T ss_dssp EECSSTTCCHHHHHHHHHHSTTEEEEEEEE
T ss_pred EEECCCccccHHHHHHHhcCCCceEEEEEE
Confidence 344443 4889999999999999998753
No 66
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=44.78 E-value=14 Score=25.22 Aligned_cols=21 Identities=24% Similarity=0.594 Sum_probs=18.7
Q ss_pred ccChhHHHHHHHHhhcCCCee
Q 034782 14 LRCDRCQDRIANAISRVNDVE 34 (83)
Q Consensus 14 M~C~~C~~~V~~aL~~i~GV~ 34 (83)
-.|..|+.+|.+-|.+-+.|.
T Consensus 95 SPC~~CA~~va~FL~~~~~v~ 115 (190)
T 3vow_A 95 SPCPDCAGEVAEFLARHSNVN 115 (190)
T ss_dssp CCCHHHHHHHHHHHHHCTTEE
T ss_pred CchHHHHHHHHHHHHhCCCeE
Confidence 459999999999999999874
No 67
>3pro_C Alpha-lytic protease; Pro region, foldase, protein folding, serine protease, hydro hydrolase inhibitor complex; HET: AES; 1.80A {Lysobacter enzymogenes} SCOP: d.52.1.1 d.52.1.1 PDB: 2pro_A* 4pro_C
Probab=44.64 E-value=33 Score=22.69 Aligned_cols=24 Identities=17% Similarity=0.192 Sum_probs=20.3
Q ss_pred CCeeEEEEEccCCEEEEEecCCcc
Q 034782 31 NDVESMEVLVSEKKVILTYKSASE 54 (83)
Q Consensus 31 ~GV~~V~vdl~~~~V~V~~~~~~~ 54 (83)
+||....||+.+++|.|+.+....
T Consensus 114 ~~v~~W~VD~~tN~VVV~a~~~~~ 137 (166)
T 3pro_C 114 DGVQSWYVDPRSNAVVVKVDDGAT 137 (166)
T ss_dssp TTEEEEEEEGGGTEEEEEEETTCH
T ss_pred CCCceEEEeCCCCeEEEEeCCCCh
Confidence 467899999999999999985554
No 68
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=44.15 E-value=24 Score=28.94 Aligned_cols=50 Identities=16% Similarity=0.280 Sum_probs=36.8
Q ss_pred HHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCc----ccchHHHHHhhhhccc
Q 034782 20 QDRIANAISRVNDVESMEVLVSEKKVILTYKSAS----EESSGKAAVGVKNNQS 69 (83)
Q Consensus 20 ~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~----~~~~~~i~~~~~~~~~ 69 (83)
...+++.|.++|||.+|+++-...++.|+.|.+. -.+..++...++....
T Consensus 159 ~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~~~~~ 212 (1052)
T 2v50_A 159 VSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQAQNV 212 (1052)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHhcCc
Confidence 4579999999999999998855557777776443 3566777777766653
No 69
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=43.63 E-value=44 Score=18.95 Aligned_cols=24 Identities=21% Similarity=0.329 Sum_probs=21.0
Q ss_pred EEEEe-eccChhHHHHHHHHhhcCC
Q 034782 8 VILAA-DLRCDRCQDRIANAISRVN 31 (83)
Q Consensus 8 ~~l~V-~M~C~~C~~~V~~aL~~i~ 31 (83)
.++.+ |+.|+.-.-+++++|.+++
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~ 35 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQ 35 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSC
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCC
Confidence 45677 9999999999999999874
No 70
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=43.18 E-value=22 Score=23.38 Aligned_cols=21 Identities=19% Similarity=0.389 Sum_probs=17.3
Q ss_pred HHHHHHHhhcCCCeeEEEEEc
Q 034782 20 QDRIANAISRVNDVESMEVLV 40 (83)
Q Consensus 20 ~~~V~~aL~~i~GV~~V~vdl 40 (83)
...+++.|..++||.+++|.+
T Consensus 90 e~ELartI~~i~gV~~ArVhl 110 (170)
T 2y9j_Y 90 EQRLEQSLQTMEGVLSARVHI 110 (170)
T ss_dssp HHHHHHHHTTSTTEEEEEEEE
T ss_pred HHHHHHHHHcCCCeeEEEEEE
Confidence 457889999999999888743
No 71
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=42.45 E-value=8.7 Score=22.12 Aligned_cols=18 Identities=11% Similarity=0.505 Sum_probs=15.3
Q ss_pred eeccChhHHHHHHHHhhc
Q 034782 12 ADLRCDRCQDRIANAISR 29 (83)
Q Consensus 12 V~M~C~~C~~~V~~aL~~ 29 (83)
.++.|+.|...|++.|..
T Consensus 34 aGt~CG~C~~~i~~il~~ 51 (73)
T 4e6k_G 34 VGTQCGKCASLAKQVVRE 51 (73)
T ss_dssp TTSSSCTTHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHHH
Confidence 478899999999998864
No 72
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=42.12 E-value=15 Score=25.36 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=18.7
Q ss_pred ccChhHHHHHHHHhhcCCCee
Q 034782 14 LRCDRCQDRIANAISRVNDVE 34 (83)
Q Consensus 14 M~C~~C~~~V~~aL~~i~GV~ 34 (83)
--|..|+.+|.+-|..-+.|.
T Consensus 109 SPC~~CA~~v~~FL~~~~~v~ 129 (203)
T 3v4k_A 109 SPCFSCAQEMAKFISKNKHVS 129 (203)
T ss_pred CChHHHHHHHHHHHhhCCCeE
Confidence 459999999999999999874
No 73
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=40.67 E-value=58 Score=19.53 Aligned_cols=57 Identities=12% Similarity=0.158 Sum_probs=36.5
Q ss_pred EEEeeccChhHHHHHHHHhhcC--CCeeEEEEEccCCEEEEEecCCc-ccchHHHHHhhhhccc
Q 034782 9 ILAADLRCDRCQDRIANAISRV--NDVESMEVLVSEKKVILTYKSAS-EESSGKAAVGVKNNQS 69 (83)
Q Consensus 9 ~l~V~M~C~~C~~~V~~aL~~i--~GV~~V~vdl~~~~V~V~~~~~~-~~~~~~i~~~~~~~~~ 69 (83)
.++-|+..+- ...|.++|..+ +||.+|++ .+...++.+.+. +...+++.+.-.+.|.
T Consensus 23 ~lKpgVlDPq-G~aV~~aL~~LG~~~V~~VR~---GK~~el~~~~~~~~~a~~~v~~mc~kLLa 82 (94)
T 1vq3_A 23 QYRSNVRDPR-GETIERVLREEKGLPVKKLRL---GKSIHLEVEAENKEKAYEIVKKACEELLV 82 (94)
T ss_dssp EECTTSCCHH-HHHHHHHHHHTTCCCEEEEEE---EEEEEEEEECSSHHHHHHHHHHHHHHTTS
T ss_pred EECCCCcCcH-HHHHHHHHHHcCCCccceeee---eeEEEEEecCCCHHHHHHHHHHHHHHHcC
Confidence 3333666665 78888999876 57988877 567777777554 3334555555555443
No 74
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=38.56 E-value=59 Score=19.01 Aligned_cols=43 Identities=7% Similarity=0.136 Sum_probs=34.2
Q ss_pred EEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccC-----CEEEEEec
Q 034782 8 VILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSE-----KKVILTYK 50 (83)
Q Consensus 8 ~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~-----~~V~V~~~ 50 (83)
..+-| ++.-.--...|.+.+.....|.++.+-... +-+-|++.
T Consensus 8 ~~l~V~nLp~~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~ 56 (116)
T 2fy1_A 8 GKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFE 56 (116)
T ss_dssp CEEEEECCTTTCCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECS
T ss_pred CEEEEeCCCCCCCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEEC
Confidence 34455 787777888999999999889998887654 68889986
No 75
>1gh8_A Translation elongation factor 1BETA; alpha-beta sandwich, gene regulation, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.58.12.1
Probab=37.86 E-value=24 Score=21.12 Aligned_cols=24 Identities=17% Similarity=0.292 Sum_probs=20.1
Q ss_pred hhHHHHHHHHhhcCCCeeEEEEEc
Q 034782 17 DRCQDRIANAISRVNDVESMEVLV 40 (83)
Q Consensus 17 ~~C~~~V~~aL~~i~GV~~V~vdl 40 (83)
..-...+++.+++++||+++++..
T Consensus 61 ~~~td~lee~i~~~e~Vqsvdv~~ 84 (89)
T 1gh8_A 61 EGGTEAAEESLSGIEGVSNIEVTD 84 (89)
T ss_dssp CGGGGHHHHHHTTSCSSEEEEEEE
T ss_pred CcChHHHHHHHhccCCccEEEEEE
Confidence 456788999999999999998753
No 76
>4dx5_A Acriflavine resistance protein B; multidrug efflux protein, membrane protein, transpor; HET: LMT OCT D10 HEX D12 MIY C14 LMU DD9 UND GOL; 1.90A {Escherichia coli} PDB: 2hrt_A* 2gif_A* 4dx7_A* 4dx6_A* 3noc_A* 1oy6_A* 1oy9_A* 1oyd_A* 1oy8_A* 1oye_A 2rdd_A* 2w1b_A* 3d9b_A 2i6w_A* 3nog_A* 1t9x_A* 1t9t_A* 1t9v_A* 1t9w_A* 1t9u_A* ...
Probab=37.24 E-value=35 Score=27.85 Aligned_cols=48 Identities=15% Similarity=0.214 Sum_probs=35.0
Q ss_pred HHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCc----ccchHHHHHhhhhc
Q 034782 20 QDRIANAISRVNDVESMEVLVSEKKVILTYKSAS----EESSGKAAVGVKNN 67 (83)
Q Consensus 20 ~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~----~~~~~~i~~~~~~~ 67 (83)
...+++.|+++|||.+|++.-....+.|..|.+. -.+..++...++..
T Consensus 159 ~~~i~~~l~~i~gv~~v~~~g~~~~i~i~~d~~~l~~~glt~~~v~~~l~~~ 210 (1057)
T 4dx5_A 159 AANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQ 210 (1057)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHHh
Confidence 3679999999999999998655557777776444 35666677776654
No 77
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=37.15 E-value=53 Score=18.72 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=20.6
Q ss_pred eccChhHHH---HHHHHhhcCCCeeEEEEEccC
Q 034782 13 DLRCDRCQD---RIANAISRVNDVESMEVLVSE 42 (83)
Q Consensus 13 ~M~C~~C~~---~V~~aL~~i~GV~~V~vdl~~ 42 (83)
.-.|+.|.. .+++.....+++.-+.+|...
T Consensus 40 a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~d~ 72 (116)
T 3qfa_C 40 ATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDD 72 (116)
T ss_dssp CTTCHHHHHHHHHHHHHHTTCTTSEEEEEETTT
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 567999976 445555566777777777654
No 78
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.67 E-value=51 Score=17.66 Aligned_cols=64 Identities=13% Similarity=0.240 Sum_probs=44.3
Q ss_pred EEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcccchHHHHHhhhhcccccccccccc
Q 034782 10 LAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKSASEESSGKAAVGVKNNQSNKAVKGTAW 78 (83)
Q Consensus 10 l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (83)
+-| ++.-.-....+.+.+.....|.++.+....+-+-|++. +.+ .+.+++++...|..-.|+++
T Consensus 15 l~V~~l~~~~t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~-~~~----~A~~a~~~l~~~~~~~g~~l 79 (85)
T 2ytc_A 15 LYVGGLGDTITETDLRNHFYQFGEIRTITVVQRQQCAFIQFA-TRQ----AAEVAAEKSFNKLIVNGRRL 79 (85)
T ss_dssp EEEECCTTTSCHHHHHHHHHTTSCEEEEEEEGGGTEEEEEES-SHH----HHHHHHHTTTTTCEETTEEC
T ss_pred EEEcCCCCCCCHHHHHHHHHhCCCEeEEEEECCCCEEEEEEC-CHH----HHHHHHHHhcCCeeECCCEE
Confidence 345 77777788899999999988999999888889999997 333 33444443324444444443
No 79
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=35.40 E-value=58 Score=17.97 Aligned_cols=31 Identities=23% Similarity=0.513 Sum_probs=21.1
Q ss_pred eccChhHHH---HHHHHhhcCCCeeEEEEEccCC
Q 034782 13 DLRCDRCQD---RIANAISRVNDVESMEVLVSEK 43 (83)
Q Consensus 13 ~M~C~~C~~---~V~~aL~~i~GV~~V~vdl~~~ 43 (83)
.=.|+.|.. .+++.....+++.-+.+|....
T Consensus 27 a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~~~~ 60 (105)
T 4euy_A 27 TENCGVCDVMLRKVNYVLENYNYVEKIEILLQDM 60 (105)
T ss_dssp ESSCHHHHHHHHHHHHHHHTCTTEEEEEEEECCC
T ss_pred CCCCcchHHHHHHHHHHHHHcCCceEEEEECCCC
Confidence 567999976 4455555667787777776554
No 80
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=34.47 E-value=57 Score=17.62 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=20.4
Q ss_pred EEEEeeccChhHHHHHHHHhhcCCCeeEEEE
Q 034782 8 VILAADLRCDRCQDRIANAISRVNDVESMEV 38 (83)
Q Consensus 8 ~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~v 38 (83)
+.|.+...-..-...+.+.|.+++||.+|..
T Consensus 47 ~~i~v~~~~~~~l~~l~~~L~~~~~V~~v~~ 77 (88)
T 2ko1_A 47 CNLMIFVKNTDKLTTLMDKLRKVQGVFTVER 77 (88)
T ss_dssp EEEEEEESSHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEEEEEECCHHHHHHHHHHHhcCCCceEEEE
Confidence 4444444445556778888888888887743
No 81
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A
Probab=33.54 E-value=64 Score=19.18 Aligned_cols=42 Identities=17% Similarity=0.062 Sum_probs=28.0
Q ss_pred HHHHHHhhcCCCeeEEEEEccCCEEEEEecC--CcccchHHHHHhh
Q 034782 21 DRIANAISRVNDVESMEVLVSEKKVILTYKS--ASEESSGKAAVGV 64 (83)
Q Consensus 21 ~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~--~~~~~~~~i~~~~ 64 (83)
.-+.+.|-+++||.+|- +...-++|+-+. +++...-.|..++
T Consensus 39 SPLA~~LF~i~gVk~Vf--~g~dFITVtK~~~~dW~~ikp~V~~~I 82 (91)
T 1pqx_A 39 PAFINDILKVEGVKSIF--HVMDFISVDKENDANWETVLPKVEAVF 82 (91)
T ss_dssp CHHHHHHHHSTTEEEEE--EETTEEEEEECTTSCSTTTHHHHHHHT
T ss_pred CHHHHHhhCCCCeeEEE--EeCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 34566677899999664 557789998754 3455555555554
No 82
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=32.43 E-value=44 Score=22.62 Aligned_cols=54 Identities=7% Similarity=0.041 Sum_probs=33.0
Q ss_pred EEEEEEeeccChhHHHHHHHHhhcCCCeeEEEEEccCC-------------------------EEEEEecCCcccchHHH
Q 034782 6 QEVILAADLRCDRCQDRIANAISRVNDVESMEVLVSEK-------------------------KVILTYKSASEESSGKA 60 (83)
Q Consensus 6 ~~~~l~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~-------------------------~V~V~~~~~~~~~~~~i 60 (83)
+++.| ++-|==|...+-+.|.. +||.++.+=...+ .|.|.+| |..++.+.|
T Consensus 20 ~~a~f--agGCFWg~E~~F~~l~g-~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yD-p~~isy~~L 95 (187)
T 3pim_A 20 KLITL--ACGCFWGTEHMYRKYLN-DRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYN-PKVITLREL 95 (187)
T ss_dssp EEEEE--ESSCHHHHHHHHHHHHG-GGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEEC-TTTSCHHHH
T ss_pred cEEEE--ecCCchhhHHHHHHhcC-CCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEEC-CccCCHHHH
Confidence 45555 56677776655544411 6888777655443 3888998 556666665
Q ss_pred HHh
Q 034782 61 AVG 63 (83)
Q Consensus 61 ~~~ 63 (83)
-++
T Consensus 96 L~~ 98 (187)
T 3pim_A 96 TDF 98 (187)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 83
>3ne5_A Cation efflux system protein CUSA; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3k07_A 3k0i_A 3kso_A 3kss_A 3t53_A 3t51_A 3t56_A 4dop_A 4dnt_A
Probab=32.11 E-value=74 Score=25.96 Aligned_cols=53 Identities=13% Similarity=0.049 Sum_probs=39.7
Q ss_pred HHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcc------cchHHHHHhhhhcccccc
Q 034782 20 QDRIANAISRVNDVESMEVLVSEKKVILTYKSASE------ESSGKAAVGVKNNQSNKA 72 (83)
Q Consensus 20 ~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~------~~~~~i~~~~~~~~~~~~ 72 (83)
+..+.+.|.++||+.++..+...+.-.+....+++ .+..++...++..+.|..
T Consensus 704 a~~l~~~l~~~~gv~~v~~~~~~~~~~l~i~id~~~a~~~Gls~~~v~~~l~~~~~g~~ 762 (1054)
T 3ne5_A 704 AEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTVADVQLFVTSAVGGAM 762 (1054)
T ss_dssp HHHHHHHHHHSTTCSEEEECCSSCEEEEEEEECHHHHHTTTCCHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHhcCCCceEeeccccCCCeeEEEEECHHHHHHcCCCHHHHHHHHHHHhCCce
Confidence 46788899999999999998888776666655542 566677777777776543
No 84
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.91 E-value=65 Score=17.22 Aligned_cols=62 Identities=5% Similarity=0.075 Sum_probs=40.6
Q ss_pred EEe-eccChhHHHHHHHHhhcCCCeeEEEEEcc------CCEEEEEecCCcccchHHHHHhhhhcccccc
Q 034782 10 LAA-DLRCDRCQDRIANAISRVNDVESMEVLVS------EKKVILTYKSASEESSGKAAVGVKNNQSNKA 72 (83)
Q Consensus 10 l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~------~~~V~V~~~~~~~~~~~~i~~~~~~~~~~~~ 72 (83)
+-| ++...-....+.+.+.....|.++.+-.. .+-.-|++. +.+.-...+.......+.|+.
T Consensus 8 l~v~nlp~~~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~-~~~~a~~A~~~l~g~~~~g~~ 76 (85)
T 1x4e_A 8 LYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFD-SPSAAQKAVTALKASGVQAQM 76 (85)
T ss_dssp EEEESCCTTCCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEES-CHHHHHHHHHHHHHHTCCEES
T ss_pred EEEeCCCCCCCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEEC-CHHHHHHHHHHhcCCeEeeEE
Confidence 344 78777788889999999888999887655 346888987 443333334444444454443
No 85
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=30.39 E-value=65 Score=17.37 Aligned_cols=25 Identities=16% Similarity=0.279 Sum_probs=17.6
Q ss_pred EeeccChhHHHHHHHHhhcCCCeeEEEEEc
Q 034782 11 AADLRCDRCQDRIANAISRVNDVESMEVLV 40 (83)
Q Consensus 11 ~V~M~C~~C~~~V~~aL~~i~GV~~V~vdl 40 (83)
.+.|.+.. .+.|.+.|||..|+-|.
T Consensus 36 ~~~lp~~~-----~~~L~~~p~V~yVE~D~ 60 (65)
T 2z30_B 36 VVDVPANA-----VGKLKKMPGVEKVEFDH 60 (65)
T ss_dssp EEEECGGG-----HHHHHTSTTEEEEEECC
T ss_pred EEEeCHHH-----HHHHhcCCCceEEecCc
Confidence 34566555 35688999999988774
No 86
>1f60_B Elongation factor EEF1BA; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: d.58.12.1 PDB: 1g7c_B* 2b7c_B 2b7b_B 1ije_B* 1ijf_B*
Probab=30.31 E-value=48 Score=19.93 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=20.0
Q ss_pred hhHHHHHHHHhhcCCC-eeEEEEEc
Q 034782 17 DRCQDRIANAISRVND-VESMEVLV 40 (83)
Q Consensus 17 ~~C~~~V~~aL~~i~G-V~~V~vdl 40 (83)
..-...+++.+..++| |+++++..
T Consensus 66 ~~~tD~lee~i~~~ed~VqSvdI~~ 90 (94)
T 1f60_B 66 KVSLDDLQQSIEEDEDHVQSTDIAA 90 (94)
T ss_dssp TCCHHHHHHHHHTCTTTEEEEEEEE
T ss_pred ccChHHHHHHHHhccCceeEEEEEE
Confidence 4557889999999999 99998753
No 87
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=29.90 E-value=46 Score=18.88 Aligned_cols=25 Identities=28% Similarity=0.306 Sum_probs=19.8
Q ss_pred cCCCe--eEEEEEccCCEEEEEecCCc
Q 034782 29 RVNDV--ESMEVLVSEKKVILTYKSAS 53 (83)
Q Consensus 29 ~i~GV--~~V~vdl~~~~V~V~~~~~~ 53 (83)
.+||+ ++++|++..+.++|.+....
T Consensus 14 dlPG~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 14 DVNHFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp ECTTTCCSEEEEEEETTEEEEEEEEC-
T ss_pred ECCCCChHHEEEEEECCEEEEEEEEcc
Confidence 46775 58999999999999998543
No 88
>2hzc_A Splicing factor U2AF 65 kDa subunit; RNA splicing, RRM, RNA recognition, alternative conformation binding protein; HET: P6G; 1.47A {Homo sapiens} PDB: 1u2f_A
Probab=29.78 E-value=69 Score=17.11 Aligned_cols=38 Identities=5% Similarity=0.187 Sum_probs=29.2
Q ss_pred eccChhHHHHHHHHhhcC----C-------CeeEEEEEccCCEEEEEec
Q 034782 13 DLRCDRCQDRIANAISRV----N-------DVESMEVLVSEKKVILTYK 50 (83)
Q Consensus 13 ~M~C~~C~~~V~~aL~~i----~-------GV~~V~vdl~~~~V~V~~~ 50 (83)
++.-.-....+.+.+... . .|.++.+....+-+-|++.
T Consensus 13 nLp~~~t~~~l~~~F~~~~~~~g~~~~~~~~v~~~~~~~~kg~afV~f~ 61 (87)
T 2hzc_A 13 NIPFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFR 61 (87)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHTTCCSSSSCSEEEEEECSSSSEEEEEES
T ss_pred CCCCCCCHHHHHHHHHHHhhhcccccCCCCcceEEEecCCCcEEEEEcC
Confidence 566556677788777765 3 5888888888889999997
No 89
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=29.59 E-value=61 Score=18.05 Aligned_cols=28 Identities=7% Similarity=0.038 Sum_probs=19.6
Q ss_pred eccChhHH-----HHHHHHhhcCCCeeEEEEEcc
Q 034782 13 DLRCDRCQ-----DRIANAISRVNDVESMEVLVS 41 (83)
Q Consensus 13 ~M~C~~C~-----~~V~~aL~~i~GV~~V~vdl~ 41 (83)
.-.|+.|. .++.+.|... ||.-..+|..
T Consensus 9 ~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di~ 41 (93)
T 1t1v_A 9 TSVTGSREIKSQQSEVTRILDGK-RIQYQLVDIS 41 (93)
T ss_dssp CSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEETT
T ss_pred cCCCCCchhhHHHHHHHHHHHHC-CCceEEEECC
Confidence 46799997 8888888764 5654455554
No 90
>1b64_A Elongation factor 1-beta; guanine nucleotide exchange factor, G-protein, translation elongation; NMR {Homo sapiens} SCOP: d.58.12.1
Probab=29.11 E-value=52 Score=19.65 Aligned_cols=25 Identities=28% Similarity=0.367 Sum_probs=20.5
Q ss_pred hhHHHHHHHHhhcCCC-eeEEEEEcc
Q 034782 17 DRCQDRIANAISRVND-VESMEVLVS 41 (83)
Q Consensus 17 ~~C~~~V~~aL~~i~G-V~~V~vdl~ 41 (83)
..-...+++.+.+++| |+++++..-
T Consensus 63 ~v~tD~lee~i~~~ed~VqSvdI~~~ 88 (91)
T 1b64_A 63 KVGTDMLEEQITAFEDYVQSMDVAAF 88 (91)
T ss_dssp SSCHHHHHHHHTTCTTTEEEEEESCC
T ss_pred ccChHHHHHHHHhccCceeEEEEEEE
Confidence 4557889999999999 999988543
No 91
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=28.84 E-value=34 Score=22.53 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=19.8
Q ss_pred hcCCCeeEEEEEccCCEEEEEec
Q 034782 28 SRVNDVESMEVLVSEKKVILTYK 50 (83)
Q Consensus 28 ~~i~GV~~V~vdl~~~~V~V~~~ 50 (83)
-++|||..++.|+.+++|+-.-|
T Consensus 118 ~aiPGVTtlklDm~~~Rv~eh~D 140 (154)
T 3gzb_A 118 VAIPAVTSLKLDMLNRRVTEHVD 140 (154)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEE
T ss_pred EecCceEEEeecCCccchhhhHh
Confidence 36899999999999999987655
No 92
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.80 E-value=54 Score=19.24 Aligned_cols=29 Identities=10% Similarity=-0.003 Sum_probs=20.6
Q ss_pred eccChhHHH-----HHHHHhhcCCCeeEEEEEccC
Q 034782 13 DLRCDRCQD-----RIANAISRVNDVESMEVLVSE 42 (83)
Q Consensus 13 ~M~C~~C~~-----~V~~aL~~i~GV~~V~vdl~~ 42 (83)
--.|+.|.. ++.+.|... ||.-..+|+..
T Consensus 15 ~~~C~~C~~~~~~~~ak~~L~~~-gi~y~~vdI~~ 48 (111)
T 2ct6_A 15 ASSSGFVAIKKKQQDVVRFLEAN-KIEFEEVDITM 48 (111)
T ss_dssp CSSCSCHHHHHHHHHHHHHHHHT-TCCEEEEETTT
T ss_pred cCCCCCcccchhHHHHHHHHHHc-CCCEEEEECCC
Confidence 467999997 888888764 56555565553
No 93
>2go8_A Hypothetical protein YQJZ; SR435, protein structure, structural genomics, PSI, protein initiative, northeast structural genomics consortium; 2.30A {Bacillus subtilis} SCOP: d.58.4.5
Probab=26.71 E-value=1.1e+02 Score=18.98 Aligned_cols=76 Identities=14% Similarity=0.218 Sum_probs=32.8
Q ss_pred eEEEEEEee-ccCh----hHHHHHHHHhhcCCCeeEEEEEccC-C-EEEEEecCCcccchHHHHHhhhhccccccccccc
Q 034782 5 SQEVILAAD-LRCD----RCQDRIANAISRVNDVESMEVLVSE-K-KVILTYKSASEESSGKAAVGVKNNQSNKAVKGTA 77 (83)
Q Consensus 5 ~~~~~l~V~-M~C~----~C~~~V~~aL~~i~GV~~V~vdl~~-~-~V~V~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 77 (83)
+..+.|.+. -.+. .=+.+++..+.++||--+++.-... + -+++.+=.+.+ .-+.-+-..++....-.+...
T Consensus 13 m~aViFe~~~~~~~~~Y~~la~~~~~la~~qpGFI~~Es~~~~dg~~is~SyW~dee--ai~aW~~~~eHr~Aq~~Gr~~ 90 (122)
T 2go8_A 13 YYAVIFSSVKSENDTGYGETAERMVSLAADQPGFLGVESVREADGRGITVSYWDSMD--AINHWRHHTEHQAAKEKGRSV 90 (122)
T ss_dssp EEEEEEEEECC------CHHHHHHHHHHHHSTTEEEEEEEECTTSEEEEEEEESCHH--HHHHHHHHC------------
T ss_pred EEEEEEEEEeCCchhHHHHHHHHHHHHHhhCCCceEEEEEEcCCCCEEEEEEeCCHH--HHHHHHhCHHHHHHHHhHHHH
Confidence 445567762 2332 2377888899999997677643333 2 34444432222 112222234455455555788
Q ss_pred cccCC
Q 034782 78 WFPSY 82 (83)
Q Consensus 78 ~~~~~ 82 (83)
||.+|
T Consensus 91 w~~~y 95 (122)
T 2go8_A 91 WYESY 95 (122)
T ss_dssp -CCEE
T ss_pred HhccC
Confidence 99887
No 94
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=24.56 E-value=75 Score=16.62 Aligned_cols=26 Identities=15% Similarity=0.284 Sum_probs=15.7
Q ss_pred ccChhHHHHHHHHhhcCCCeeEEEEEcc
Q 034782 14 LRCDRCQDRIANAISRVNDVESMEVLVS 41 (83)
Q Consensus 14 M~C~~C~~~V~~aL~~i~GV~~V~vdl~ 41 (83)
-.|+.|.. +...|... |+.-..+|..
T Consensus 9 ~~C~~C~~-~~~~l~~~-~i~~~~vdi~ 34 (81)
T 1h75_A 9 NDCVQCHA-TKRAMENR-GFDFEMINVD 34 (81)
T ss_dssp TTCHHHHH-HHHHHHHT-TCCCEEEETT
T ss_pred CCChhHHH-HHHHHHHC-CCCeEEEECC
Confidence 46999975 56666654 4544444443
No 95
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=24.48 E-value=49 Score=18.87 Aligned_cols=23 Identities=22% Similarity=0.200 Sum_probs=18.4
Q ss_pred cCCCe--eEEEEEccCCEEEEEecC
Q 034782 29 RVNDV--ESMEVLVSEKKVILTYKS 51 (83)
Q Consensus 29 ~i~GV--~~V~vdl~~~~V~V~~~~ 51 (83)
.+||+ ++++|++..+.++|.+..
T Consensus 13 dlPG~~~edi~V~v~~~~L~I~g~~ 37 (90)
T 2y1y_A 13 DVKHFSPEELKVKVLGDVIEVHGKH 37 (90)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEEE
T ss_pred ECCCCcHHHeEEEEECCEEEEEEEE
Confidence 46776 468888889999999874
No 96
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=24.25 E-value=46 Score=19.50 Aligned_cols=24 Identities=21% Similarity=0.243 Sum_probs=19.1
Q ss_pred cCCCe--eEEEEEccCCEEEEEecCC
Q 034782 29 RVNDV--ESMEVLVSEKKVILTYKSA 52 (83)
Q Consensus 29 ~i~GV--~~V~vdl~~~~V~V~~~~~ 52 (83)
.+||+ ++++|++..+.++|.+...
T Consensus 18 dlPG~~~edI~V~v~~~~L~I~g~~~ 43 (101)
T 2wj5_A 18 DVKHFSPEEISVKVVGDHVEVHARHE 43 (101)
T ss_dssp ECTTSCGGGEEEEEETTEEEEEEEEE
T ss_pred ECCCCcHHHeEEEEECCEEEEEEEEe
Confidence 46776 4788888999999999753
No 97
>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region; alpha-beta plait, open-faced beta sandwich, ferredoxin-like fold; NMR {Escherichia coli} SCOP: d.64.1.1
Probab=23.89 E-value=1.2e+02 Score=18.88 Aligned_cols=59 Identities=12% Similarity=0.057 Sum_probs=27.1
Q ss_pred EEEEEe--eccChhHHHHHHHHhhcCCCeeEEEEEccC----CEEEEEecCCc-ccchHHHHHhhhhccc
Q 034782 7 EVILAA--DLRCDRCQDRIANAISRVNDVESMEVLVSE----KKVILTYKSAS-EESSGKAAVGVKNNQS 69 (83)
Q Consensus 7 ~~~l~V--~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~----~~V~V~~~~~~-~~~~~~i~~~~~~~~~ 69 (83)
.++|+. |-.|+.|.. ..+.+-++.-.+... .+ +.||+-...+. +.....+.+.+++.+.
T Consensus 7 ~~vyst~~~~~~~~~~~---~~~p~~~~~V~I~~e-r~gR~GK~VT~V~Gl~~~~~dlk~laK~LKkk~a 72 (116)
T 1d1r_A 7 RLVYSTETGRIDEPKAA---PVRPKGDGVVRIQRQ-TSGRKGKGVCLITGVDLDDAELTKLAAELKKKCG 72 (116)
T ss_dssp ------------------------CCCCEEEEEEC-CCSSSSCCCEEEECCCSCHHHHHHHHHHHTTSSS
T ss_pred cEEEeCCCCccCccccc---cCCCCCCCeEEEEEE-eCCCCCCeEEEEeCCcCchhhHHHHHHHHHHHhc
Confidence 456665 444777643 455544555455555 32 46887776666 7788888888888774
No 98
>1wg1_A KIAA1579 protein, homolog EXC-7; RBD, structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wi6_A
Probab=23.83 E-value=96 Score=16.81 Aligned_cols=37 Identities=14% Similarity=0.156 Sum_probs=30.3
Q ss_pred eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEec
Q 034782 13 DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYK 50 (83)
Q Consensus 13 ~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~ 50 (83)
++.-.--...+++.+.+. +|.++.++...+-.-|++.
T Consensus 12 nLp~~~t~~~l~~~F~~~-~v~~~~i~~~~g~afV~f~ 48 (88)
T 1wg1_A 12 NLPQDSNCQEVHDLLKDY-DLKYCYVDRNKRTAFVTLL 48 (88)
T ss_dssp SCCSSCCHHHHHHHTCSS-CCCCEEEEGGGTEEEECCS
T ss_pred CCCCCCCHHHHHHHHhhC-CeEEEEEeCCCcEEEEEEC
Confidence 566566678899999988 8999999877778888886
No 99
>3mcb_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens} PDB: 3lkx_B
Probab=23.81 E-value=75 Score=17.21 Aligned_cols=24 Identities=17% Similarity=0.270 Sum_probs=17.3
Q ss_pred hhcCCCeeEEEEEccCCEEEEEec
Q 034782 27 ISRVNDVESMEVLVSEKKVILTYK 50 (83)
Q Consensus 27 L~~i~GV~~V~vdl~~~~V~V~~~ 50 (83)
|..++||+.|.+--..+.+-+-..
T Consensus 7 lk~v~gI~rVti~K~~~~lf~i~~ 30 (54)
T 3mcb_A 7 LRQVTGVTRVTIRKSKNILFVITK 30 (54)
T ss_dssp CEECTTEEEEEEESSSSEEEEESS
T ss_pred CEECCCEEEEEEEeCCCEEEEECC
Confidence 457899999988776666655444
No 100
>2ltl_A NIFU-like protein, mitochondrial; structural genomics, northeast structural consortium, NESG, PSI-biology; NMR {Saccharomyces cerevisiae}
Probab=29.50 E-value=17 Score=23.02 Aligned_cols=46 Identities=11% Similarity=0.103 Sum_probs=29.0
Q ss_pred HHHHHHhh-cCCCeeEEEEEccCCEEEEEec--CCcccchHHHHHhhhhcc
Q 034782 21 DRIANAIS-RVNDVESMEVLVSEKKVILTYK--SASEESSGKAAVGVKNNQ 68 (83)
Q Consensus 21 ~~V~~aL~-~i~GV~~V~vdl~~~~V~V~~~--~~~~~~~~~i~~~~~~~~ 68 (83)
.-+.+.|- +++||++|- +...-|+|+-+ .+++...-+|..++.+.+
T Consensus 61 SPLA~~LF~~i~GV~~Vf--~g~DFITVtK~~~~dW~~ikp~I~~~I~e~~ 109 (119)
T 2ltl_A 61 SKLAQQIFLQCPGVESLM--IGDDFLTINKDRMVHWNSIKPEIIDLLTKQL 109 (119)
Confidence 34556666 999999664 45666777654 345555555666665554
No 101
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=23.68 E-value=1e+02 Score=18.40 Aligned_cols=30 Identities=10% Similarity=0.178 Sum_probs=19.5
Q ss_pred eccChhHHHH---HHHHhhcCCCeeEEEEEccC
Q 034782 13 DLRCDRCQDR---IANAISRVNDVESMEVLVSE 42 (83)
Q Consensus 13 ~M~C~~C~~~---V~~aL~~i~GV~~V~vdl~~ 42 (83)
.-.|+.|..- +++.....+++.-+.+|...
T Consensus 41 a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~~~ 73 (153)
T 2wz9_A 41 APWAPQCAQMNEVMAELAKELPQVSFVKLEAEG 73 (153)
T ss_dssp CTTCHHHHHHHHHHHHHHHHCTTSEEEEEETTT
T ss_pred CCCCHhHHHHHHHHHHHHHHcCCeEEEEEECCC
Confidence 4569999763 34444455677777777654
No 102
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=23.61 E-value=49 Score=17.49 Aligned_cols=27 Identities=15% Similarity=0.309 Sum_probs=16.6
Q ss_pred ccChhHHHHHHHHhhcC----CCeeEEEEEcc
Q 034782 14 LRCDRCQDRIANAISRV----NDVESMEVLVS 41 (83)
Q Consensus 14 M~C~~C~~~V~~aL~~i----~GV~~V~vdl~ 41 (83)
-.|+.|... +..|.++ +|+.-..+|..
T Consensus 9 ~~C~~C~~~-~~~l~~l~~~~~~i~~~~vdi~ 39 (85)
T 1ego_A 9 SGCPYCVRA-KDLAEKLSNERDDFQYQYVDIR 39 (85)
T ss_dssp TTSTHHHHH-HHHHHHHHHHHSSCEEEEECHH
T ss_pred CCCCCHHHH-HHHHHHHHhcCCCceEEEEecc
Confidence 469999764 4455543 56665566553
No 103
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=23.26 E-value=1.1e+02 Score=17.30 Aligned_cols=30 Identities=23% Similarity=0.361 Sum_probs=19.6
Q ss_pred eccChhHHHH---HHHHhhcCCCeeEEEEEccC
Q 034782 13 DLRCDRCQDR---IANAISRVNDVESMEVLVSE 42 (83)
Q Consensus 13 ~M~C~~C~~~---V~~aL~~i~GV~~V~vdl~~ 42 (83)
.-.|+.|..- +++.....+++.-+.+|...
T Consensus 39 a~wC~~C~~~~p~l~~~~~~~~~v~~~~vd~~~ 71 (114)
T 2oe3_A 39 ATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDE 71 (114)
T ss_dssp CTTCHHHHHTHHHHHHHHHHCTTSEEEEEETTT
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 5679999654 34555566777777777543
No 104
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=22.99 E-value=50 Score=23.81 Aligned_cols=43 Identities=16% Similarity=0.280 Sum_probs=35.3
Q ss_pred EEEEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEec
Q 034782 8 VILAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYK 50 (83)
Q Consensus 8 ~~l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~ 50 (83)
.++.+ |+.|++-..++++++..+.-=+.++|-+.++++.+..-
T Consensus 322 ~~~~~~g~~~~~p~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~ 365 (373)
T 1okg_A 322 MTLKVDGAPCERPDAEVQSAATHLHAGEAATVYFKSGRVVTIEV 365 (373)
T ss_dssp CCEEETTEEESSCCHHHHHHHTTCBTTCEEEEEETTSCEEEEEC
T ss_pred eeeeccCcccCCcHHHHHHHHHhcCCCCcEEEEEccCcEEEEEC
Confidence 45667 89999999999999999976667889999997765544
No 105
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.44 E-value=1.1e+02 Score=16.90 Aligned_cols=42 Identities=7% Similarity=0.104 Sum_probs=34.5
Q ss_pred EEe-eccChhHHHHHHHHhhcCCCeeEEEEEccCCEEEEEecC
Q 034782 10 LAA-DLRCDRCQDRIANAISRVNDVESMEVLVSEKKVILTYKS 51 (83)
Q Consensus 10 l~V-~M~C~~C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~ 51 (83)
+-| ++.-.--...+.+.+.....|.++.+....+-+-|++..
T Consensus 18 l~V~nlp~~~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~ 60 (99)
T 2cpj_A 18 LFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLET 60 (99)
T ss_dssp EEEESCCTTCCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSS
T ss_pred EEEeCCCCCCCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECC
Confidence 334 676666788899999999899999998888999999973
No 106
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=22.37 E-value=89 Score=15.87 Aligned_cols=27 Identities=22% Similarity=0.391 Sum_probs=15.9
Q ss_pred eccChhHHHHHHHHhhcCCCeeEEEEEcc
Q 034782 13 DLRCDRCQDRIANAISRVNDVESMEVLVS 41 (83)
Q Consensus 13 ~M~C~~C~~~V~~aL~~i~GV~~V~vdl~ 41 (83)
.-.|+.|.. +...|... |+.-..+|..
T Consensus 8 ~~~C~~C~~-~~~~l~~~-~i~~~~~di~ 34 (75)
T 1r7h_A 8 KPACVQCTA-TKKALDRA-GLAYNTVDIS 34 (75)
T ss_dssp CTTCHHHHH-HHHHHHHT-TCCCEEEETT
T ss_pred CCCChHHHH-HHHHHHHc-CCCcEEEECC
Confidence 356999975 55566654 4544444443
No 107
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=22.18 E-value=1.1e+02 Score=16.82 Aligned_cols=29 Identities=10% Similarity=0.083 Sum_probs=19.1
Q ss_pred eccChhHHHH---HHHHhhcCCCeeEEEEEcc
Q 034782 13 DLRCDRCQDR---IANAISRVNDVESMEVLVS 41 (83)
Q Consensus 13 ~M~C~~C~~~---V~~aL~~i~GV~~V~vdl~ 41 (83)
.-.|+.|..- +++.....+++.-+.+|..
T Consensus 33 a~wC~~C~~~~~~l~~~~~~~~~v~~~~vd~~ 64 (111)
T 2pu9_C 33 TQWCGPSKAMAPKYEKLAEEYLDVIFLKLDCN 64 (111)
T ss_dssp CTTCHHHHHHHHHHHHHHHHCTTSEEEEEECS
T ss_pred CCcCHhHHHHCHHHHHHHHHCCCeEEEEEecC
Confidence 5679999653 3444455677777777765
No 108
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=22.13 E-value=30 Score=21.15 Aligned_cols=19 Identities=21% Similarity=0.497 Sum_probs=12.3
Q ss_pred eccChhHHH---HHHHHhhcCC
Q 034782 13 DLRCDRCQD---RIANAISRVN 31 (83)
Q Consensus 13 ~M~C~~C~~---~V~~aL~~i~ 31 (83)
+..|++|.. .+.+.+.+.+
T Consensus 30 dy~Cp~C~~~~~~~~~l~~~~~ 51 (184)
T 4dvc_A 30 SFYCPHCNTFEPIIAQLKQQLP 51 (184)
T ss_dssp CTTCHHHHHHHHHHHHHHHTSC
T ss_pred CCCCHhHHHHhHHHHHHHhhcC
Confidence 899999975 3344444444
No 109
>2kzf_A RBFA, ribosome-binding factor A; JCSG, joint center structural genomics, PSI-biology, protein structure initiative; NMR {Thermotoga maritima}
Probab=21.79 E-value=95 Score=18.54 Aligned_cols=36 Identities=6% Similarity=-0.022 Sum_probs=24.0
Q ss_pred CeeEEEEEccCCEEEEEecCCc-ccchHHHHHhhhhc
Q 034782 32 DVESMEVLVSEKKVILTYKSAS-EESSGKAAVGVKNN 67 (83)
Q Consensus 32 GV~~V~vdl~~~~V~V~~~~~~-~~~~~~i~~~~~~~ 67 (83)
.|.+|+++.+-+-++|-+..-. +.....+.+.++++
T Consensus 37 tVt~V~vs~Dl~~AkVyvs~~g~~~~~~~~~~~L~~a 73 (106)
T 2kzf_A 37 TFSRVELSKDKRYADVYVSFLGTPEERKETVEILNRA 73 (106)
T ss_dssp CEEEEEECTTSCEEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCEEEEEEEeCCChhhHHHHHHHHHHh
Confidence 4889999999999999887654 33334444444433
No 110
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=21.75 E-value=44 Score=19.20 Aligned_cols=26 Identities=15% Similarity=0.222 Sum_probs=19.8
Q ss_pred cCCCe--eEEEEEccCCEEEEEecCCcc
Q 034782 29 RVNDV--ESMEVLVSEKKVILTYKSASE 54 (83)
Q Consensus 29 ~i~GV--~~V~vdl~~~~V~V~~~~~~~ 54 (83)
.+||+ ++++|++..+.++|.+....+
T Consensus 21 ~lPG~~~edi~v~~~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 21 DLPGIDPSQIEVQMDKGILSIRGERKSE 48 (100)
T ss_dssp ECTTSCGGGCEEEEETTEEEEEEEECCG
T ss_pred ECCCCCHHHEEEEEECCEEEEEEEEcCc
Confidence 46775 478888889999999985543
No 111
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=21.64 E-value=2.4e+02 Score=20.55 Aligned_cols=50 Identities=12% Similarity=0.120 Sum_probs=31.7
Q ss_pred HHHHHHhhcCCCeeEEEEEccCC-------EEEEEecCC--cccchHHHHHhhhhcccc
Q 034782 21 DRIANAISRVNDVESMEVLVSEK-------KVILTYKSA--SEESSGKAAVGVKNNQSN 70 (83)
Q Consensus 21 ~~V~~aL~~i~GV~~V~vdl~~~-------~V~V~~~~~--~~~~~~~i~~~~~~~~~~ 70 (83)
..||.+|.+.|+|.++.|-.... .+-|..... .......+.+.+++.|..
T Consensus 452 ~eIE~~l~~~p~V~~a~Vv~~~~~~~g~~~~a~vv~~~~~~~~~~~~~l~~~l~~~L~~ 510 (549)
T 3g7s_A 452 FELEALLMKHEAVMDVAVIGKPDEEAGEVPKAFIVLKPEYRGKVDEEDIIEWVRERISG 510 (549)
T ss_dssp HHHHHHHTTSTTEEEEEEECCCC------CEEEEEECSTTTTSCCHHHHHHHHHTTCC-
T ss_pred HHHHHHHHhCCCeeeEEEEeeEccccCceEEEEEEECCCccCcCCHHHHHHHHHHhccC
Confidence 57999999999999887743221 233443333 345566777777777643
No 112
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=21.54 E-value=55 Score=19.83 Aligned_cols=19 Identities=16% Similarity=0.515 Sum_probs=14.9
Q ss_pred eccChhHHHHHHHHhhcCC
Q 034782 13 DLRCDRCQDRIANAISRVN 31 (83)
Q Consensus 13 ~M~C~~C~~~V~~aL~~i~ 31 (83)
.-.|+.|.+.+...|....
T Consensus 44 ~~~Cp~C~~a~k~~L~~~~ 62 (129)
T 3ctg_A 44 KTYCPYCKATLSTLFQELN 62 (129)
T ss_dssp CTTCHHHHHHHHHHHTTSC
T ss_pred CCCCCchHHHHHHHHHhcC
Confidence 4679999987688887653
No 113
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=21.36 E-value=76 Score=25.96 Aligned_cols=52 Identities=6% Similarity=-0.036 Sum_probs=35.4
Q ss_pred HHHHHHHHhhcCCCeeEEEEEccCCEEEEEecCCcc------cchHHHHHhhhhcccc
Q 034782 19 CQDRIANAISRVNDVESMEVLVSEKKVILTYKSASE------ESSGKAAVGVKNNQSN 70 (83)
Q Consensus 19 C~~~V~~aL~~i~GV~~V~vdl~~~~V~V~~~~~~~------~~~~~i~~~~~~~~~~ 70 (83)
=++.+.+.|+++||+.++..+...+.-.+..+.+++ .+..++...++..+.|
T Consensus 698 ~a~~l~~~l~~~~gv~~v~~~~~~~~p~~~i~id~~~a~~~Gls~~~i~~~l~~~~~g 755 (1052)
T 2v50_A 698 ARNKFLMLAAQNPALQRVRPNGMSDEPQYKLEIDDEKASALGVSLADINSTVSIAWGS 755 (1052)
T ss_dssp HHHHHHHHTTSCTTEEEEEESSCCCEECCBCEECHHHHTTTTCCHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCCeEeccccccCCCeeEEEEECHHHHHHcCCCHHHHHHHHHHHhCC
Confidence 456788999999999999999888755444443332 4455666666655544
No 114
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}
Probab=21.20 E-value=66 Score=18.91 Aligned_cols=17 Identities=24% Similarity=0.307 Sum_probs=14.0
Q ss_pred HHHHHHHhhcCCCeeEE
Q 034782 20 QDRIANAISRVNDVESM 36 (83)
Q Consensus 20 ~~~V~~aL~~i~GV~~V 36 (83)
..+|.+.+.++|||.+|
T Consensus 12 ~~~I~~~l~~~~gV~~v 28 (107)
T 2zzt_A 12 YDDIFAVLERFPNVHNP 28 (107)
T ss_dssp HHHHHHHHTTCSSCEEE
T ss_pred HHHHHHHHHcCCCcccc
Confidence 47889999999997765
No 115
>2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A
Probab=21.18 E-value=22 Score=25.29 Aligned_cols=19 Identities=16% Similarity=0.445 Sum_probs=5.6
Q ss_pred eccChhHHHHHH-----HHhhcCC
Q 034782 13 DLRCDRCQDRIA-----NAISRVN 31 (83)
Q Consensus 13 ~M~C~~C~~~V~-----~aL~~i~ 31 (83)
-|+|.+|..++- +.|.+++
T Consensus 16 ~~~~~GCg~K~~~~~L~~~l~~l~ 39 (345)
T 2zod_A 16 LVRSSGCAAKVGPGDLQEILKGFN 39 (345)
T ss_dssp GCC----------CCCCHHHHHSC
T ss_pred HhccCCcccccCHHHHHHHHHhcC
Confidence 489999999885 4455444
No 116
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=21.11 E-value=27 Score=19.49 Aligned_cols=23 Identities=13% Similarity=0.200 Sum_probs=20.1
Q ss_pred EEEe-eccChhHHHHHHHHhhcCC
Q 034782 9 ILAA-DLRCDRCQDRIANAISRVN 31 (83)
Q Consensus 9 ~l~V-~M~C~~C~~~V~~aL~~i~ 31 (83)
++.+ |+.|+.-.-++.++|.+++
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~ 31 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAK 31 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCC
Confidence 4566 9999999999999999874
No 117
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=20.98 E-value=1.2e+02 Score=17.57 Aligned_cols=29 Identities=14% Similarity=0.224 Sum_probs=18.7
Q ss_pred eccChhHHHHH------HHHhhcCCCeeEEEEEcc
Q 034782 13 DLRCDRCQDRI------ANAISRVNDVESMEVLVS 41 (83)
Q Consensus 13 ~M~C~~C~~~V------~~aL~~i~GV~~V~vdl~ 41 (83)
.-.|+.|..-. .+.....+++.-+.+|..
T Consensus 40 a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~~ 74 (134)
T 2fwh_A 40 ADWCVACKEFEKYTFSDPQVQKALADTVLLQANVT 74 (134)
T ss_dssp CTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEECT
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeCC
Confidence 56799998743 333345567776777664
No 118
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=20.47 E-value=1.5e+02 Score=17.82 Aligned_cols=35 Identities=14% Similarity=0.131 Sum_probs=21.1
Q ss_pred EEEEe-eccChhHHH---HHHHHhhcCCC-eeEEEEEccC
Q 034782 8 VILAA-DLRCDRCQD---RIANAISRVND-VESMEVLVSE 42 (83)
Q Consensus 8 ~~l~V-~M~C~~C~~---~V~~aL~~i~G-V~~V~vdl~~ 42 (83)
+.+.. .--|+.|.. .+++.-...++ +.-+.+|..+
T Consensus 26 vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~ 65 (149)
T 3gix_A 26 LVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQ 65 (149)
T ss_dssp EEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTT
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCc
Confidence 34444 456999976 44454455666 6666666543
No 119
>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A
Probab=20.39 E-value=1.4e+02 Score=19.31 Aligned_cols=31 Identities=3% Similarity=0.177 Sum_probs=20.8
Q ss_pred EEEEeeccChhHHH---HHHHHhh-cCCCeeEEEE
Q 034782 8 VILAADLRCDRCQD---RIANAIS-RVNDVESMEV 38 (83)
Q Consensus 8 ~~l~V~M~C~~C~~---~V~~aL~-~i~GV~~V~v 38 (83)
+.++..=.|.+|.. -|+++|. ++|+|..|..
T Consensus 119 v~v~l~Gac~~~~Tlk~~Ie~~l~e~vP~i~~V~~ 153 (154)
T 2z51_A 119 VKIRITGPAAGVMTVRVAVTQKLREKIPSIAAVQL 153 (154)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred EEEEEecCCcccHhHHHHHHHHHHHHCCCccEEEe
Confidence 34455455888853 5777774 8899988753
No 120
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=20.25 E-value=51 Score=19.20 Aligned_cols=23 Identities=9% Similarity=0.140 Sum_probs=18.6
Q ss_pred cCCCe--eEEEEEccCCEEEEEecC
Q 034782 29 RVNDV--ESMEVLVSEKKVILTYKS 51 (83)
Q Consensus 29 ~i~GV--~~V~vdl~~~~V~V~~~~ 51 (83)
.+||+ ++++|++..+.++|.+..
T Consensus 23 ~lPG~~~edi~v~~~~~~L~I~g~~ 47 (102)
T 4fei_A 23 DVPGVDAGTLALAEDGGQLTVSGER 47 (102)
T ss_dssp ECTTCCGGGCEEEEETTEEEEEEEE
T ss_pred ECCCCchHhEEEEEECCEEEEEEEE
Confidence 56776 478888899999998875
Done!