Query 034791
Match_columns 83
No_of_seqs 103 out of 149
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 10:23:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034791.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034791hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hp8_A HU-P8; leukemia, cystei 48.8 8.9 0.0003 23.2 1.7 17 11-27 26-42 (68)
2 2dgc_A Protein (GCN4); basic d 47.7 29 0.001 20.0 3.9 29 51-79 10-38 (63)
3 3zxw_B Ribulose bisphosphate c 42.6 9.8 0.00033 25.1 1.4 22 14-35 67-90 (118)
4 1gd2_E Transcription factor PA 42.6 51 0.0017 19.6 4.5 28 52-79 10-37 (70)
5 1rbl_M Ribulose 1,5 bisphospha 41.6 11 0.00037 24.5 1.4 24 12-35 66-91 (109)
6 1svd_M Ribulose bisphosphate c 40.3 12 0.00041 24.4 1.5 24 12-35 68-93 (110)
7 1gu4_A CAAT/enhancer binding p 37.0 69 0.0024 19.3 5.2 20 49-68 14-33 (78)
8 2lql_A Coiled-coil-helix-coile 35.7 34 0.0012 22.0 3.1 36 12-48 14-49 (113)
9 2uwq_A Apoptosis-stimulating o 35.4 14 0.00047 23.3 1.1 16 9-27 27-42 (86)
10 1hjb_A Ccaat/enhancer binding 33.3 86 0.0029 19.3 5.2 20 49-68 14-33 (87)
11 2i7u_A Four-alpha-helix bundle 33.2 37 0.0013 19.8 2.7 20 63-82 5-24 (62)
12 2cs4_A Protein C12ORF2; GTP bi 32.5 21 0.00072 22.7 1.7 14 9-22 26-39 (95)
13 1ei0_A P8MTCP1; helix-turn-hel 31.9 58 0.002 17.1 3.2 33 13-47 3-35 (38)
14 3c5c_A RAS-like protein 12; GD 29.6 11 0.00038 24.0 0.0 10 1-10 1-10 (187)
15 1bxn_I Rubisco, protein (ribul 28.3 23 0.00078 24.0 1.4 23 13-35 61-85 (139)
16 1bwv_S Rubisco, protein (ribul 28.1 23 0.00079 24.0 1.4 23 13-35 61-85 (138)
17 1wdd_S Ribulose bisphosphate c 26.7 25 0.00087 23.5 1.4 23 13-35 79-103 (128)
18 1afs_A 3-alpha-HSD, 3-alpha-hy 24.8 34 0.0012 24.5 1.8 35 13-48 144-178 (323)
19 4h4n_A Hypothetical protein BA 24.5 12 0.00043 22.3 -0.5 9 31-39 22-30 (67)
20 1dh3_A Transcription factor CR 24.2 1E+02 0.0035 17.2 4.9 27 51-77 2-28 (55)
21 1s1p_A Aldo-keto reductase fam 24.1 36 0.0012 24.6 1.8 35 13-48 144-178 (331)
22 1mi3_A Xylose reductase, XR; a 23.8 39 0.0013 24.1 2.0 34 14-48 148-181 (322)
23 1ur3_M Hypothetical oxidoreduc 23.4 42 0.0014 24.2 2.1 33 14-47 158-190 (319)
24 1us0_A Aldose reductase; oxido 23.2 43 0.0015 23.8 2.1 35 13-48 138-172 (316)
25 1qwk_A Aldose reductase, aldo- 23.2 44 0.0015 23.9 2.2 34 13-47 131-164 (317)
26 3n2t_A Putative oxidoreductase 23.0 41 0.0014 24.4 2.0 36 12-48 153-188 (348)
27 3nr7_A DNA-binding protein H-N 21.9 1.5E+02 0.005 18.2 4.9 30 49-78 41-70 (86)
28 1pz1_A GSP69, general stress p 21.9 55 0.0019 23.5 2.5 34 13-47 133-166 (333)
29 4f0h_B Ribulose bisphosphate c 21.6 48 0.0016 22.4 2.0 22 13-34 61-84 (138)
30 3buv_A 3-OXO-5-beta-steroid 4- 21.5 43 0.0015 24.0 1.8 34 14-48 148-181 (326)
31 1lqa_A TAS protein; TIM barrel 21.2 60 0.002 23.1 2.5 34 14-48 158-191 (346)
32 3krb_A Aldose reductase; ssgci 21.0 48 0.0016 24.0 2.0 36 12-48 153-188 (334)
33 3h7u_A Aldo-keto reductase; st 20.9 55 0.0019 23.7 2.3 34 14-48 157-190 (335)
34 1gve_A Aflatoxin B1 aldehyde r 20.9 49 0.0017 23.6 2.0 35 13-48 117-151 (327)
35 1pyf_A IOLS protein; beta-alph 20.2 43 0.0015 23.7 1.6 34 13-47 133-166 (312)
36 4gac_A Alcohol dehydrogenase [ 20.1 59 0.002 22.9 2.3 33 13-46 139-171 (324)
37 2bp1_A Aflatoxin B1 aldehyde r 20.1 51 0.0018 24.1 2.0 34 14-48 151-184 (360)
No 1
>1hp8_A HU-P8; leukemia, cysteine motif; NMR {Homo sapiens} SCOP: a.17.1.1 PDB: 2hp8_A
Probab=48.83 E-value=8.9 Score=23.16 Aligned_cols=17 Identities=29% Similarity=0.727 Sum_probs=14.2
Q ss_pred hhHHHHHHHHHhhhhhC
Q 034791 11 PMCAEIIEEFQKCHLDH 27 (83)
Q Consensus 11 ~~C~~lI~aL~eCH~~~ 27 (83)
.-|.++|++|.+|=..-
T Consensus 26 skCq~~id~L~eCc~~~ 42 (68)
T 1hp8_A 26 SKCQAVIQELRKCCAQY 42 (68)
T ss_dssp HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47999999999996653
No 2
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=47.70 E-value=29 Score=20.04 Aligned_cols=29 Identities=24% Similarity=0.287 Sum_probs=19.2
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 034791 51 KAVKRKANFEQSKKLKERLESLRKETAEA 79 (83)
Q Consensus 51 R~~r~~~n~~~ar~kr~r~~~~~ke~~e~ 79 (83)
+..++.+|++.|+.-|.+-.+...+++..
T Consensus 10 ~~~KR~rNreAArrsR~RK~~~~~~Le~~ 38 (63)
T 2dgc_A 10 AALKRARNTEAARRSRARKLQRMKQLEDK 38 (63)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 44567779988887777666666665543
No 3
>3zxw_B Ribulose bisphosphate carboxylase small chain; CO2/O2 specificity, carbon dioxide fixation, photosynthesis, thermostability; HET: KCX CAP; 2.10A {Thermosynechococcus elongatus} PDB: 2ybv_B*
Probab=42.61 E-value=9.8 Score=25.14 Aligned_cols=22 Identities=18% Similarity=0.466 Sum_probs=17.3
Q ss_pred HHHHHHHHhhhhhCc--hhhhccC
Q 034791 14 AEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 14 ~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
.++|.+|++|++.++ |-+.+|-
T Consensus 67 ~~Vl~Ele~C~k~~p~~yVRliGf 90 (118)
T 3zxw_B 67 QDVLNEVQQCRSEYPNCFIRVVAF 90 (118)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCceEEEEEE
Confidence 579999999999976 5566664
No 4
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=42.58 E-value=51 Score=19.60 Aligned_cols=28 Identities=14% Similarity=0.207 Sum_probs=20.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 034791 52 AVKRKANFEQSKKLKERLESLRKETAEA 79 (83)
Q Consensus 52 ~~r~~~n~~~ar~kr~r~~~~~ke~~e~ 79 (83)
..|+.+|+...+..|.+-++.-++++..
T Consensus 10 ~kR~~qNR~AQRafReRK~~~i~~LE~~ 37 (70)
T 1gd2_E 10 SKRKAQNRAAQRAFRKRKEDHLKALETQ 37 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3577889998888888777777776544
No 5
>1rbl_M Ribulose 1,5 bisphosphate carboxylase/oxygenase ( chain); lyase(carbon-carbon), lyase; HET: CAP; 2.20A {Synechococcus elongatus} SCOP: d.73.1.1 PDB: 1rsc_M*
Probab=41.63 E-value=11 Score=24.54 Aligned_cols=24 Identities=13% Similarity=0.265 Sum_probs=18.8
Q ss_pred hHHHHHHHHHhhhhhCc--hhhhccC
Q 034791 12 MCAEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 12 ~C~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
+-.++|..|++|++.++ |-+.+|.
T Consensus 66 d~~~Vl~Ele~C~k~~p~~yVRligf 91 (109)
T 1rbl_M 66 APQQVLDEVRECRSEYGDCYIRVAGF 91 (109)
T ss_dssp CHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCCeEEEEEE
Confidence 56789999999999876 5566653
No 6
>1svd_M Ribulose bisphosphate carboxylase small chain; beta-alpha-barrel, lyase; 1.80A {Halothiobacillus neapolitanus} SCOP: d.73.1.1
Probab=40.25 E-value=12 Score=24.39 Aligned_cols=24 Identities=17% Similarity=0.322 Sum_probs=18.7
Q ss_pred hHHHHHHHHHhhhhhCc--hhhhccC
Q 034791 12 MCAEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 12 ~C~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
+-.++|..|++|++.+| |-|.+|.
T Consensus 68 d~~~Vl~El~~C~k~~p~~yVRligf 93 (110)
T 1svd_M 68 NVDNVLAEIEACRSAYPTHQVKLVAY 93 (110)
T ss_dssp CHHHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCCeEEEEEE
Confidence 56789999999999876 5566653
No 7
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=37.01 E-value=69 Score=19.35 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=13.3
Q ss_pred HHHHHHHHHhHHHHHHHHHH
Q 034791 49 QEKAVKRKANFEQSKKLKER 68 (83)
Q Consensus 49 ~ER~~r~~~n~~~ar~kr~r 68 (83)
.++..++.+|.+.++.-|++
T Consensus 14 ~~Y~~rR~rNN~AakrSR~k 33 (78)
T 1gu4_A 14 DEYKIRRERNNIAVRKSRDK 33 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHH
Confidence 46777788887776655443
No 8
>2lql_A Coiled-coil-helix-coiled-coil-helix domain-contai protein 5; CHCH domain, mitochondrial import, MIA40-dependent disulfide system; NMR {Homo sapiens}
Probab=35.67 E-value=34 Score=21.98 Aligned_cols=36 Identities=25% Similarity=0.693 Sum_probs=27.0
Q ss_pred hHHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 12 MCAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 12 ~C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
.|.....++..|-.++. ...-..|-.+..+|+.|-.
T Consensus 14 ~C~~~~~~f~~C~~~~~-~~dp~~Cl~eg~~vt~Ca~ 49 (113)
T 2lql_A 14 YCGRELEQYGQCVAAKP-ESWQRDCHYLKMSIAQCTS 49 (113)
T ss_dssp CCHHHHHHHHHHHHHCT-THHHHTCSHHHHHHHHHHH
T ss_pred HccHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHHHh
Confidence 48888888888876654 3455678888888888853
No 9
>2uwq_A Apoptosis-stimulating of P53 protein 2; ASPP2, ubiquitin-like, SH3-domain, cell cycle, ANK repeat, SH3-binding; NMR {Homo sapiens}
Probab=35.42 E-value=14 Score=23.26 Aligned_cols=16 Identities=13% Similarity=0.704 Sum_probs=12.3
Q ss_pred CchhHHHHHHHHHhhhhhC
Q 034791 9 RHPMCAEIIEEFQKCHLDH 27 (83)
Q Consensus 9 ~h~~C~~lI~aL~eCH~~~ 27 (83)
..+.|.|+| || ||+.|
T Consensus 27 ~~TTC~DVV-aL--~~~~G 42 (86)
T 2uwq_A 27 PETICRDVV-DL--CKEPG 42 (86)
T ss_dssp TTCBSHHHH-HH--SCSSC
T ss_pred CCCcHHHHH-HH--HHccC
Confidence 357899999 88 67665
No 10
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=33.29 E-value=86 Score=19.33 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=12.9
Q ss_pred HHHHHHHHHhHHHHHHHHHH
Q 034791 49 QEKAVKRKANFEQSKKLKER 68 (83)
Q Consensus 49 ~ER~~r~~~n~~~ar~kr~r 68 (83)
.++..++.+|.+.++.-|.+
T Consensus 14 ~~Y~~rR~rNN~AarrSR~k 33 (87)
T 1hjb_A 14 DEYKIRRERNNIAVRKSRDK 33 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHH
Confidence 35777777777776555443
No 11
>2i7u_A Four-alpha-helix bundle; HOMO dimer, anesthetic binding, de novo protein/ligand binding protein complex; NMR {Synthetic} PDB: 2jst_A
Probab=33.18 E-value=37 Score=19.78 Aligned_cols=20 Identities=30% Similarity=0.235 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 034791 63 KKLKERLESLRKETAEAEAK 82 (83)
Q Consensus 63 r~kr~r~~~~~ke~~e~~~~ 82 (83)
|+.-.++-+.|+.+.|+.|+
T Consensus 5 reeaaklfeewkklaeeaak 24 (62)
T 2i7u_A 5 REEAAKLFEEWKKLAEEAAK 24 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34456788899999998875
No 12
>2cs4_A Protein C12ORF2; GTP binding, ubiquitin fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=32.50 E-value=21 Score=22.73 Aligned_cols=14 Identities=14% Similarity=0.467 Sum_probs=11.3
Q ss_pred CchhHHHHHHHHHh
Q 034791 9 RHPMCAEIIEEFQK 22 (83)
Q Consensus 9 ~h~~C~~lI~aL~e 22 (83)
..+.|+|+|.||-+
T Consensus 26 ~~TTC~DVV~aL~~ 39 (95)
T 2cs4_A 26 EVTTCQEVVIALAQ 39 (95)
T ss_dssp SSSCHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHh
Confidence 35789999999854
No 13
>1ei0_A P8MTCP1; helix-turn-helix, disulfide bridges, cell cycle; NMR {Synthetic} SCOP: j.77.1.1
Probab=31.88 E-value=58 Score=17.08 Aligned_cols=33 Identities=24% Similarity=0.554 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHH
Q 034791 13 CAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCF 47 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CL 47 (83)
|.....|++.|=..+.+ -.+.|.+.-++|..|-
T Consensus 3 C~~~a~a~q~CL~~n~~--d~skCq~~id~l~~Cc 35 (38)
T 1ei0_A 3 CQKQAAEIQKCLQANSY--LESKCQAVIQELKKCA 35 (38)
T ss_dssp SHHHHHHHHHHHHHTTT--CGGGTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCC--cHHHHHHHHHHHHHHH
Confidence 55555555555555432 3445555555555553
No 14
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=29.62 E-value=11 Score=23.96 Aligned_cols=10 Identities=20% Similarity=0.076 Sum_probs=0.0
Q ss_pred CCCCCCCCCc
Q 034791 1 MHPPLTLHRH 10 (83)
Q Consensus 1 MHP~L~~~~h 10 (83)
|||+++.+.+
T Consensus 1 ~~~~~~~~~~ 10 (187)
T 3c5c_A 1 MHHHHHHSSG 10 (187)
T ss_dssp ----------
T ss_pred CCccccccch
Confidence 6666665543
No 15
>1bxn_I Rubisco, protein (ribulose bisphosphate carboxylase small; lyase (carbon-carbon), lyase; 2.70A {Cupriavidus necator} SCOP: d.73.1.1
Probab=28.32 E-value=23 Score=24.01 Aligned_cols=23 Identities=17% Similarity=0.147 Sum_probs=17.5
Q ss_pred HHHHHHHHHhhhhhCc--hhhhccC
Q 034791 13 CAEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
=.++|..|++|++.+| |-+.+|.
T Consensus 61 ~~~Vl~Ele~C~k~~p~~YVRliGf 85 (139)
T 1bxn_I 61 AAGILMEINNARNTFPNHYIRVTAF 85 (139)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEE
Confidence 3579999999999876 5566554
No 16
>1bwv_S Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: d.73.1.1 PDB: 1iwa_B
Probab=28.14 E-value=23 Score=23.96 Aligned_cols=23 Identities=22% Similarity=0.251 Sum_probs=17.3
Q ss_pred HHHHHHHHHhhhhhCc--hhhhccC
Q 034791 13 CAEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
=.++|..|++|++.+| |-+.+|.
T Consensus 61 ~~~Vl~Ele~C~k~~p~~YVRliGf 85 (138)
T 1bwv_S 61 PAAVLFEINACRKARSNFYIKVVGF 85 (138)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEE
Confidence 3579999999999876 4455553
No 17
>1wdd_S Ribulose bisphosphate carboxylase small chain C; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: d.73.1.1 PDB: 3axm_S* 3axk_S* 8ruc_I* 1aus_S 1rbo_S* 1rco_S* 1rcx_S* 1rxo_S* 1upm_C* 1upp_I* 1aa1_S* 3rub_S 1rlc_S* 1rld_S 1ej7_S 1ir1_S* 4rub_S*
Probab=26.68 E-value=25 Score=23.46 Aligned_cols=23 Identities=13% Similarity=0.392 Sum_probs=17.1
Q ss_pred HHHHHHHHHhhhhhCc--hhhhccC
Q 034791 13 CAEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
=.++|..|++|++.+| |-|.+|-
T Consensus 79 ~~~Vl~El~~C~k~~P~~YVRligf 103 (128)
T 1wdd_S 79 ATQVLKELEEAKKAYPDAFVRIIGF 103 (128)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEEE
Confidence 4578999999999876 4455553
No 18
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=24.85 E-value=34 Score=24.54 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=28.7
Q ss_pred HHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 13 CAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
=.+.+.+|++..++|-+ |++|.+|.--+.|...+.
T Consensus 144 ~~e~~~ale~l~~~Gki-r~iGvSn~~~~~l~~~~~ 178 (323)
T 1afs_A 144 ICDTWEAMEKCKDAGLA-KSIGVSNFNCRQLERILN 178 (323)
T ss_dssp HHHHHHHHHHHHHTTSE-EEEEEESCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCc-CEEEeeCCCHHHHHHHHH
Confidence 46899999999999975 899999987777766554
No 19
>4h4n_A Hypothetical protein BA_2335; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.10A {Bacillus anthracis}
Probab=24.49 E-value=12 Score=22.32 Aligned_cols=9 Identities=44% Similarity=0.940 Sum_probs=7.2
Q ss_pred hhccCCchH
Q 034791 31 KFFGDCTEL 39 (83)
Q Consensus 31 K~~G~CN~~ 39 (83)
-|||.||++
T Consensus 22 tffgp~nev 30 (67)
T 4h4n_A 22 TFFGPYNEV 30 (67)
T ss_dssp EEECTTSCE
T ss_pred EEecchhhh
Confidence 489999974
No 20
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=24.16 E-value=1e+02 Score=17.16 Aligned_cols=27 Identities=15% Similarity=0.210 Sum_probs=16.9
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 034791 51 KAVKRKANFEQSKKLKERLESLRKETA 77 (83)
Q Consensus 51 R~~r~~~n~~~ar~kr~r~~~~~ke~~ 77 (83)
|..+...|++.|+.-|.+-.+.-.+++
T Consensus 2 r~rR~~~NResA~rSR~RKk~~~~~LE 28 (55)
T 1dh3_A 2 REVRLMKNREAARESRRKKKEYVKSLE 28 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 455667888877776665555544443
No 21
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=24.10 E-value=36 Score=24.56 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=28.7
Q ss_pred HHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 13 CAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
=.+.+.+|++..++|-+ |++|.+|.--+.|...+.
T Consensus 144 ~~e~~~ale~l~~~Gki-r~iGvSn~~~~~l~~~~~ 178 (331)
T 1s1p_A 144 LCTTWEAMEKCKDAGLA-KSIGVSNFNRRQLEMILN 178 (331)
T ss_dssp HHHHHHHHHHHHHTTSE-EEEEEESCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCc-cEEEEeCCCHHHHHHHHH
Confidence 35899999999999975 899999987777766554
No 22
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=23.81 E-value=39 Score=24.12 Aligned_cols=34 Identities=21% Similarity=0.056 Sum_probs=28.6
Q ss_pred HHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 14 AEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 14 ~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
.+.+.+|++..++|-+ |++|.+|.--+.|...+.
T Consensus 148 ~e~~~al~~l~~~Gki-r~iGvSn~~~~~l~~~~~ 181 (322)
T 1mi3_A 148 LETWKALEKLVAAGKI-KSIGVSNFPGALLLDLLR 181 (322)
T ss_dssp HHHHHHHHHHHHTTSE-EEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCc-CEEEEcCCCHHHHHHHHH
Confidence 6899999999999975 899999987777766654
No 23
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=23.43 E-value=42 Score=24.18 Aligned_cols=33 Identities=15% Similarity=0.265 Sum_probs=27.1
Q ss_pred HHHHHHHHhhhhhCchhhhccCCchHHHHHHHHH
Q 034791 14 AEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCF 47 (83)
Q Consensus 14 ~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CL 47 (83)
.+.+.+|++..++|.+ +++|.+|.--+.|...+
T Consensus 158 ~e~~~al~~l~~~Gki-r~iGvSn~~~~~l~~~~ 190 (319)
T 1ur3_M 158 DEVADAFKHLHQSGKV-RHFGVSNFTPAQFALLQ 190 (319)
T ss_dssp HHHHHHHHHHHHTTSB-CCEEEESCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCc-cEEEecCCCHHHHHHHH
Confidence 5899999999999975 89999998776665543
No 24
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=23.21 E-value=43 Score=23.85 Aligned_cols=35 Identities=6% Similarity=0.044 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 13 CAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
=.+.+.+|++..++|-+ |++|.+|.--..|...+.
T Consensus 138 ~~e~~~ale~l~~~Gki-r~iGvSn~~~~~l~~~~~ 172 (316)
T 1us0_A 138 ILDTWAAMEELVDEGLV-KAIGISNFNHLQVEMILN 172 (316)
T ss_dssp HHHHHHHHHHHHHTTSB-SCEEEESCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCc-cEEEEecCCHHHHHHHHH
Confidence 46899999999999965 899999987777766554
No 25
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=23.20 E-value=44 Score=23.88 Aligned_cols=34 Identities=12% Similarity=0.115 Sum_probs=27.8
Q ss_pred HHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHH
Q 034791 13 CAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCF 47 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CL 47 (83)
=.+.+.+|++..++|-+ +++|.+|.--+.|..-+
T Consensus 131 ~~e~~~al~~l~~~Gki-r~iGvSn~~~~~l~~~~ 164 (317)
T 1qwk_A 131 VEDVWRQFDAVYKAGLA-KAVGVSNWNNDQISRAL 164 (317)
T ss_dssp HHHHHHHHHHHHHTTSB-SSEEEESCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCe-eEEEecCCCHHHHHHHH
Confidence 35799999999999975 89999998777666554
No 26
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=23.01 E-value=41 Score=24.40 Aligned_cols=36 Identities=25% Similarity=0.179 Sum_probs=29.2
Q ss_pred hHHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 12 MCAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 12 ~C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
.=.+.+.+|+++.++|-+ +++|.+|.--+.|...+.
T Consensus 153 ~~~e~~~al~~l~~~Gki-r~iGvSn~~~~~l~~~~~ 188 (348)
T 3n2t_A 153 PIDESARELQKLHQDGKI-RALGVSNFSPEQMDIFRE 188 (348)
T ss_dssp CHHHHHHHHHHHHHTTSE-EEEEEESCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcc-eEEecCCCCHHHHHHHHH
Confidence 346899999999999975 899999987777766553
No 27
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=21.93 E-value=1.5e+02 Score=18.18 Aligned_cols=30 Identities=13% Similarity=0.200 Sum_probs=20.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 034791 49 QEKAVKRKANFEQSKKLKERLESLRKETAE 78 (83)
Q Consensus 49 ~ER~~r~~~n~~~ar~kr~r~~~~~ke~~e 78 (83)
+||.+-..+...+..++.+++.+..+.|.+
T Consensus 41 eERree~~~~~~~~~er~~Kl~~~~e~l~~ 70 (86)
T 3nr7_A 41 NERREEESAAAAEVEERTRKLQQYREMLIA 70 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555556666677777888888877765
No 28
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=21.87 E-value=55 Score=23.50 Aligned_cols=34 Identities=15% Similarity=0.010 Sum_probs=28.1
Q ss_pred HHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHH
Q 034791 13 CAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCF 47 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CL 47 (83)
=.+.+.+|++..++|-+ +++|.+|.--+.|...+
T Consensus 133 ~~e~~~al~~l~~~Gki-r~iGvSn~~~~~l~~~~ 166 (333)
T 1pz1_A 133 IEETAEVMKELYDAGKI-RAIGVSNFSIEQMDTFR 166 (333)
T ss_dssp HHHHHHHHHHHHHTTSB-SCEEECSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCcC-CEEEecCCCHHHHHHHH
Confidence 46899999999999975 89999998777766554
No 29
>4f0h_B Ribulose bisphosphate carboxylase small chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_B 4f0m_B 1iwa_B 1bwv_S*
Probab=21.64 E-value=48 Score=22.41 Aligned_cols=22 Identities=23% Similarity=0.323 Sum_probs=16.8
Q ss_pred HHHHHHHHHhhhhhCc--hhhhcc
Q 034791 13 CAEIIEEFQKCHLDHP--IGKFFG 34 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~--~~K~~G 34 (83)
=.++|..|++|++.+| |-+.+|
T Consensus 61 ~~~Vl~Ele~C~k~~p~~YVRliG 84 (138)
T 4f0h_B 61 PAPVLFEINACRKAKSNFYIKVVG 84 (138)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEE
Confidence 3579999999999876 445555
No 30
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=21.54 E-value=43 Score=24.01 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=28.0
Q ss_pred HHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 14 AEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 14 ~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
.+.+.+|++..++|-+ |++|.+|.--+.|...+.
T Consensus 148 ~e~~~ale~l~~~Gki-r~iGvSn~~~~~l~~~~~ 181 (326)
T 3buv_A 148 CATWEAMEACKDAGLV-KSLGVSNFNRRQLELILN 181 (326)
T ss_dssp HHHHHHHHHHHHTTSE-EEEEEESCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCc-cEEEEeCCCHHHHHHHHH
Confidence 5799999999999975 899999987777766553
No 31
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=21.16 E-value=60 Score=23.12 Aligned_cols=34 Identities=12% Similarity=0.297 Sum_probs=27.8
Q ss_pred HHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 14 AEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 14 ~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
.+.+.+|++..++|-+ +++|.+|.--+.|..-+.
T Consensus 158 ~e~~~al~~l~~~Gki-r~iGvSn~~~~~l~~~~~ 191 (346)
T 1lqa_A 158 LDTLDALAEYQRAGKI-RYIGVSNETAFGVMRYLH 191 (346)
T ss_dssp HHHHHHHHHHHHTTSE-EEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCe-EEEEecCCCHHHHHHHHH
Confidence 6899999999999975 899999987776655443
No 32
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=21.04 E-value=48 Score=23.97 Aligned_cols=36 Identities=11% Similarity=0.021 Sum_probs=29.3
Q ss_pred hHHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 12 MCAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 12 ~C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
.=.+.+.+|++..++|-+ +++|.+|.--..|...+.
T Consensus 153 ~~~e~~~al~~l~~~Gki-r~iGvSn~~~~~l~~~~~ 188 (334)
T 3krb_A 153 PLADTWRAMEQLVEEGLV-KHIGVSNYTVPLLADLLN 188 (334)
T ss_dssp CHHHHHHHHHHHHHHTSE-EEEEEESCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCc-cEEEEecCCHHHHHHHHH
Confidence 346899999999999975 899999987777766554
No 33
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=20.90 E-value=55 Score=23.68 Aligned_cols=34 Identities=9% Similarity=-0.023 Sum_probs=28.2
Q ss_pred HHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 14 AEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 14 ~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
.+.+.+|++..++|-+ |++|.+|.--..|..-+.
T Consensus 157 ~e~~~aL~~l~~~Gki-r~iGvSn~~~~~l~~~~~ 190 (335)
T 3h7u_A 157 PSTWKAMEALYDSGKA-RAIGVSNFSTKKLADLLE 190 (335)
T ss_dssp HHHHHHHHHHHHTTSB-SSEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCc-cEEEecCCCHHHHHHHHH
Confidence 6789999999999975 899999987777766543
No 34
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=20.88 E-value=49 Score=23.55 Aligned_cols=35 Identities=9% Similarity=0.106 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 13 CAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
=.+.+.+|++..++|-+ +++|.+|.--+.|..-+.
T Consensus 117 ~~e~~~al~~l~~~Gki-r~iGvSn~~~~~l~~~~~ 151 (327)
T 1gve_A 117 IEETLQACHQLHQEGKF-VELGLSNYVSWEVAEICT 151 (327)
T ss_dssp HHHHHHHHHHHHHTTSE-EEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCce-eEEEecCCCHHHHHHHHH
Confidence 36899999999999975 899999987666655543
No 35
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=20.22 E-value=43 Score=23.67 Aligned_cols=34 Identities=12% Similarity=0.052 Sum_probs=27.8
Q ss_pred HHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHH
Q 034791 13 CAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCF 47 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CL 47 (83)
=.+.+.+|++..++|-+ +++|.+|.--+.|...+
T Consensus 133 ~~e~~~al~~l~~~Gki-r~iGvSn~~~~~l~~~~ 166 (312)
T 1pyf_A 133 KDEAVNALNEMKKAGKI-RSIGVSNFSLEQLKEAN 166 (312)
T ss_dssp HHHHHHHHHHHHHTTSB-SCEEEESCCHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCc-CEEEecCCCHHHHHHHH
Confidence 36899999999999975 89999998776665544
No 36
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=20.12 E-value=59 Score=22.92 Aligned_cols=33 Identities=12% Similarity=0.046 Sum_probs=26.8
Q ss_pred HHHHHHHHHhhhhhCchhhhccCCchHHHHHHHH
Q 034791 13 CAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRC 46 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~C 46 (83)
=.+.+.+|++..++|-+ +++|.+|.--+.|..-
T Consensus 139 ~~e~~~al~~l~~~Gki-r~iGvSn~~~~~l~~~ 171 (324)
T 4gac_A 139 YKETWKALEVLVAKGLV-KALGLSNFNSRQIDDV 171 (324)
T ss_dssp HHHHHHHHHHHHHTTSB-SCEEEESCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCe-eEecCCCCCHHHHHHH
Confidence 46899999999999965 8999999776666543
No 37
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=20.08 E-value=51 Score=24.05 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=27.9
Q ss_pred HHHHHHHHhhhhhCchhhhccCCchHHHHHHHHHH
Q 034791 14 AEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCFR 48 (83)
Q Consensus 14 ~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CLk 48 (83)
.+.+.+|++..++|-+ +++|.+|.--+.|..-+.
T Consensus 151 ~e~~~aL~~l~~~Gki-r~iGvSn~~~~~l~~~~~ 184 (360)
T 2bp1_A 151 EETLHACQRLHQEGKF-VELGLSNYASWEVAEICT 184 (360)
T ss_dssp HHHHHHHHHHHHTTSE-EEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCc-cEEEEeCCCHHHHHHHHH
Confidence 6899999999999975 899999987666655544
Done!