Query 034791
Match_columns 83
No_of_seqs 103 out of 149
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 10:23:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034791.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034791hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1bxni_ d.73.1.1 (I:) Ribulose 39.7 5.4 0.00039 25.2 1.4 23 13-35 61-85 (129)
2 d2hp8a_ a.17.1.1 (A:) p8-MTCP1 39.1 6.2 0.00045 22.6 1.4 29 11-40 26-54 (68)
3 d2cs4a1 d.15.1.5 (A:8-91) Ras 37.7 7.3 0.00053 22.8 1.7 17 9-25 19-35 (84)
4 d1svdm1 d.73.1.1 (M:3-110) Rib 37.6 6.3 0.00046 24.1 1.4 22 14-35 68-91 (108)
5 d1rbli_ d.73.1.1 (I:) Ribulose 33.6 7.8 0.00057 23.7 1.4 23 13-35 67-91 (109)
6 d1bwvs_ d.73.1.1 (S:) Ribulose 31.6 8.7 0.00063 24.5 1.4 23 13-35 61-85 (138)
7 d1wdds_ d.73.1.1 (S:) Ribulose 29.1 10 0.00074 23.6 1.4 23 13-35 79-103 (122)
8 d1mi3a_ c.1.7.1 (A:) Xylose re 21.3 24 0.0018 23.0 2.2 35 12-47 143-177 (319)
9 d1n81a_ a.185.1.1 (A:) Gametoc 15.2 19 0.0014 23.8 0.4 26 1-26 7-39 (186)
10 d1j1ja_ a.118.16.1 (A:) Transl 14.4 47 0.0034 21.2 2.3 35 12-46 34-68 (217)
No 1
>d1bxni_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Alcaligenes eutrophus [TaxId: 106590]}
Probab=39.74 E-value=5.4 Score=25.16 Aligned_cols=23 Identities=17% Similarity=0.147 Sum_probs=18.3
Q ss_pred HHHHHHHHHhhhhhCc--hhhhccC
Q 034791 13 CAEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
=.++|..|++|+++++ |-+.+|.
T Consensus 61 ~~~Vl~ele~c~~e~p~~YVRliG~ 85 (129)
T d1bxni_ 61 AAGILMEINNARNTFPNHYIRVTAF 85 (129)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCcCEEEEEEE
Confidence 3679999999999977 5566664
No 2
>d2hp8a_ a.17.1.1 (A:) p8-MTCP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.12 E-value=6.2 Score=22.55 Aligned_cols=29 Identities=21% Similarity=0.409 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHhhhhhCchhhhccCCchHH
Q 034791 11 PMCAEIIEEFQKCHLDHPIGKFFGDCTELK 40 (83)
Q Consensus 11 ~~C~~lI~aL~eCH~~~~~~K~~G~CN~~k 40 (83)
.-|..+|++|.+|=..- +..---.|..++
T Consensus 26 skC~~~i~~L~~CC~~f-~~~~S~cCsg~~ 54 (68)
T d2hp8a_ 26 SKCQAVIQELRKCCAQY-PKGRSVVCSGFE 54 (68)
T ss_dssp TTTHHHHHHHHHHHTTS-CGGGCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-cccCCccCCCcC
Confidence 46999999999997663 222223455543
No 3
>d2cs4a1 d.15.1.5 (A:8-91) Ras association domain-containing protein 8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.69 E-value=7.3 Score=22.82 Aligned_cols=17 Identities=12% Similarity=0.266 Sum_probs=12.8
Q ss_pred CchhHHHHHHHHHhhhh
Q 034791 9 RHPMCAEIIEEFQKCHL 25 (83)
Q Consensus 9 ~h~~C~~lI~aL~eCH~ 25 (83)
..+.|.|+|.||-+...
T Consensus 19 ~~TTC~DVV~aL~~~~g 35 (84)
T d2cs4a1 19 EVTTCQEVVIALAQAIG 35 (84)
T ss_dssp SSSCHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHhccC
Confidence 35789999999965433
No 4
>d1svdm1 d.73.1.1 (M:3-110) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Halothiobacillus neapolitanus [TaxId: 927]}
Probab=37.56 E-value=6.3 Score=24.13 Aligned_cols=22 Identities=18% Similarity=0.385 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhhhCc--hhhhccC
Q 034791 14 AEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 14 ~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
.++|.+|++|+++++ |-+.+|.
T Consensus 68 ~~Vl~Ele~c~~~~p~~YVRliG~ 91 (108)
T d1svdm1 68 DNVLAEIEACRSAYPTHQVKLVAY 91 (108)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEE
Confidence 679999999999977 5566664
No 5
>d1rbli_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Synechococcus sp., strain pcc 6301 [TaxId: 1131]}
Probab=33.64 E-value=7.8 Score=23.67 Aligned_cols=23 Identities=13% Similarity=0.287 Sum_probs=17.8
Q ss_pred HHHHHHHHHhhhhhCc--hhhhccC
Q 034791 13 CAEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
=.++|.+|++|.++++ |-+.+|.
T Consensus 67 ~~~Vl~ele~c~~~~p~~YVRliG~ 91 (109)
T d1rbli_ 67 PQQVLDEVRECRSEYGDCYIRVAGF 91 (109)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCcCEEEEEEE
Confidence 3569999999999976 5566664
No 6
>d1bwvs_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Galdieria partita [TaxId: 83374]}
Probab=31.57 E-value=8.7 Score=24.48 Aligned_cols=23 Identities=22% Similarity=0.251 Sum_probs=17.7
Q ss_pred HHHHHHHHHhhhhhCc--hhhhccC
Q 034791 13 CAEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
=.++|..|++|+++++ |-+++|.
T Consensus 61 ~~~Vl~Ele~C~k~~p~~YVRliGf 85 (138)
T d1bwvs_ 61 PAAVLFEINACRKARSNFYIKVVGF 85 (138)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCcceEEEEEE
Confidence 4679999999999976 4466663
No 7
>d1wdds_ d.73.1.1 (S:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=29.13 E-value=10 Score=23.61 Aligned_cols=23 Identities=13% Similarity=0.392 Sum_probs=17.6
Q ss_pred HHHHHHHHHhhhhhCc--hhhhccC
Q 034791 13 CAEIIEEFQKCHLDHP--IGKFFGD 35 (83)
Q Consensus 13 C~~lI~aL~eCH~~~~--~~K~~G~ 35 (83)
=..+|..|++|++.++ |-|.+|.
T Consensus 79 ~~~Vl~Ele~C~k~~p~~YVRligf 103 (122)
T d1wdds_ 79 ATQVLKELEEAKKAYPDAFVRIIGF 103 (122)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCceEEEEEE
Confidence 4579999999999976 5566664
No 8
>d1mi3a_ c.1.7.1 (A:) Xylose reductase {Fungi (Candida tenuis) [TaxId: 45596]}
Probab=21.33 E-value=24 Score=23.00 Aligned_cols=35 Identities=17% Similarity=-0.023 Sum_probs=29.3
Q ss_pred hHHHHHHHHHhhhhhCchhhhccCCchHHHHHHHHH
Q 034791 12 MCAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRCF 47 (83)
Q Consensus 12 ~C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~CL 47 (83)
...+.+.+|+++.++|.+ +++|.+|.--..+..++
T Consensus 143 ~~~e~~~~l~~l~~~Gki-r~iG~S~~~~~~~~~~~ 177 (319)
T d1mi3a_ 143 PILETWKALEKLVAAGKI-KSIGVSNFPGALLLDLL 177 (319)
T ss_dssp CHHHHHHHHHHHHHTTSE-EEEEEESCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCE-eecccCCCchHHHHHHH
Confidence 588999999999999976 99999998766666554
No 9
>d1n81a_ a.185.1.1 (A:) Gametocyte protein Pfg27 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=15.18 E-value=19 Score=23.80 Aligned_cols=26 Identities=23% Similarity=0.359 Sum_probs=20.0
Q ss_pred CCCCCCCCC-------chhHHHHHHHHHhhhhh
Q 034791 1 MHPPLTLHR-------HPMCAEIIEEFQKCHLD 26 (83)
Q Consensus 1 MHP~L~~~~-------h~~C~~lI~aL~eCH~~ 26 (83)
||.||++.- |.+|+..+..+..|-.+
T Consensus 7 ~~~pl~~~I~~i~~~EF~tt~~Yl~kimn~s~D 39 (186)
T d1n81a_ 7 THAPLSPRIRKVGDIEFHACSDYIYLLMTLSKD 39 (186)
T ss_dssp SSCSCCHHHHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred ccCCCchHHHhhhhheehhHHHHHHHHHhccCC
Confidence 899999743 45788888888888444
No 10
>d1j1ja_ a.118.16.1 (A:) Translin {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.37 E-value=47 Score=21.20 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=26.3
Q ss_pred hHHHHHHHHHhhhhhCchhhhccCCchHHHHHHHH
Q 034791 12 MCAEIIEEFQKCHLDHPIGKFFGDCTELKIKLDRC 46 (83)
Q Consensus 12 ~C~~lI~aL~eCH~~~~~~K~~G~CN~~k~~L~~C 46 (83)
.|..+|-+|...|+.......-+.|+.++..+..+
T Consensus 34 ~sk~~I~~Lhr~~~~~~~~~~~~~~~~~~~~l~~i 68 (217)
T d1j1ja_ 34 TAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTV 68 (217)
T ss_dssp HHHHHHHHHGGGGSSSSSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCccchhHHHHHHHHHHHHHH
Confidence 57888999999999877666667777766666553
Done!