Query 034797
Match_columns 83
No_of_seqs 103 out of 121
Neff 4.3
Searched_HMMs 13730
Date Mon Mar 25 10:28:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034797.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034797hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1f35a_ b.94.1.1 (A:) Olfactor 20.4 14 0.0011 24.2 0.8 10 69-78 132-141 (162)
2 d1lpva_ g.62.1.1 (A:) DM domai 20.0 6.6 0.00048 21.6 -0.8 15 11-25 17-32 (52)
3 d1q33a_ d.113.1.1 (A:) NUDT9 ( 17.4 9 0.00065 26.5 -0.9 8 76-83 103-110 (292)
4 d2jdig1 c.49.2.1 (G:1-272) ATP 9.2 41 0.003 21.6 0.6 16 17-32 73-90 (272)
5 d1agga_ g.3.6.2 (A:) omega-Aga 9.0 43 0.0031 17.7 0.5 9 17-25 7-15 (48)
6 d1h6va3 d.87.1.1 (A:367-499) M 8.9 45 0.0032 19.8 0.6 19 63-81 115-133 (133)
7 d1afsa_ c.1.7.1 (A:) 3-alpha-h 8.6 56 0.004 21.2 1.1 13 11-23 149-161 (319)
8 d1ghca_ a.4.5.13 (A:) Histone 8.3 1.1E+02 0.0083 16.6 2.3 18 6-23 6-25 (75)
9 d1hsta_ a.4.5.13 (A:) Histone 8.1 1.3E+02 0.0093 16.2 2.4 15 7-21 6-22 (74)
10 d1usta_ a.4.5.13 (A:) Histone 8.1 72 0.0053 18.1 1.3 20 8-29 11-32 (92)
No 1
>d1f35a_ b.94.1.1 (A:) Olfactory marker protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.36 E-value=14 Score=24.24 Aligned_cols=10 Identities=40% Similarity=0.770 Sum_probs=7.9
Q ss_pred hhhcceeeee
Q 034797 69 ESLRTVMYLS 78 (83)
Q Consensus 69 ESLRtVMyLS 78 (83)
...|+|||+-
T Consensus 132 AkiRKVMYFl 141 (162)
T d1f35a_ 132 AKIRKVMYFL 141 (162)
T ss_dssp HHHCSEEEEE
T ss_pred HHHHhheeee
Confidence 4689999973
No 2
>d1lpva_ g.62.1.1 (A:) DM domain of Doublesex (dsx) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=20.03 E-value=6.6 Score=21.57 Aligned_cols=15 Identities=27% Similarity=0.718 Sum_probs=12.7
Q ss_pred HHHHhhccc-ccccch
Q 034797 11 GAVEALKDQ-GFCRWN 25 (83)
Q Consensus 11 gaVealKDQ-G~CRWn 25 (83)
|.+..||++ .+|+|.
T Consensus 17 G~~~~lKgHKr~C~~~ 32 (52)
T d1lpva_ 17 GLKITLKGHKRYCKFR 32 (52)
T ss_dssp TCCCTTTTCGGGCTTT
T ss_pred CceeecCCcccccCCC
Confidence 667789999 899996
No 3
>d1q33a_ d.113.1.1 (A:) NUDT9 (mitochondrial ADP-ribose pyrophosphatase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.37 E-value=9 Score=26.46 Aligned_cols=8 Identities=63% Similarity=1.431 Sum_probs=6.3
Q ss_pred eeecccCC
Q 034797 76 YLSCWGPN 83 (83)
Q Consensus 76 yLSCWGPn 83 (83)
-|.+||||
T Consensus 103 ~l~~wGpN 110 (292)
T d1q33a_ 103 LLGRWGPN 110 (292)
T ss_dssp TCSSSEEE
T ss_pred ccCccCcc
Confidence 47888887
No 4
>d2jdig1 c.49.2.1 (G:1-272) ATP synthase (F1-ATPase), gamma subunit {Cow (Bos taurus) [TaxId: 9913]}
Probab=9.25 E-value=41 Score=21.60 Aligned_cols=16 Identities=25% Similarity=0.696 Sum_probs=8.5
Q ss_pred cccccc-cchhhh-HHHH
Q 034797 17 KDQGFC-RWNYTL-KSLH 32 (83)
Q Consensus 17 KDQG~C-RWn~al-rS~~ 32 (83)
-|+|+| ..|..+ |-+.
T Consensus 73 SDrGLcG~fN~~iik~~~ 90 (272)
T d2jdig1 73 SDRGLCGAIHSSVAKQMK 90 (272)
T ss_dssp CSCCCSTTHHHHHC----
T ss_pred cCCCCCCCccccHHHHHH
Confidence 399999 566554 5443
No 5
>d1agga_ g.3.6.2 (A:) omega-Agatoxin IV, IVa, IVb {Funnel web spider (Agelenopsis aperta) [TaxId: 6908]}
Probab=9.00 E-value=43 Score=17.69 Aligned_cols=9 Identities=44% Similarity=1.235 Sum_probs=7.0
Q ss_pred cccccccch
Q 034797 17 KDQGFCRWN 25 (83)
Q Consensus 17 KDQG~CRWn 25 (83)
||-|.|.|.
T Consensus 7 ~dyg~c~wg 15 (48)
T d1agga_ 7 EDYGKCTWG 15 (48)
T ss_dssp CSSCBCCSS
T ss_pred hhccccccC
Confidence 567889885
No 6
>d1h6va3 d.87.1.1 (A:367-499) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=8.86 E-value=45 Score=19.80 Aligned_cols=19 Identities=16% Similarity=0.300 Sum_probs=15.0
Q ss_pred cccchhhhhcceeeeeccc
Q 034797 63 KAKQSEESLRTVMYLSCWG 81 (83)
Q Consensus 63 k~kqaEESLRtVMyLSCWG 81 (83)
.......|++.++-|||-|
T Consensus 115 ~l~~~~~s~~~~~~~~cc~ 133 (133)
T d1h6va3 115 TLSVTKRSGGDILQSGCCG 133 (133)
T ss_dssp GCCCBGGGCCCCCCCSCCC
T ss_pred HhhhhhhccCCccccCCCC
Confidence 3456677889999999976
No 7
>d1afsa_ c.1.7.1 (A:) 3-alpha-hydroxysteroid dehydrogenase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=8.64 E-value=56 Score=21.23 Aligned_cols=13 Identities=38% Similarity=0.626 Sum_probs=10.8
Q ss_pred HHHHhhccccccc
Q 034797 11 GAVEALKDQGFCR 23 (83)
Q Consensus 11 gaVealKDQG~CR 23 (83)
.+.|.|+|+|++|
T Consensus 149 ~~l~~l~~~Gkir 161 (319)
T d1afsa_ 149 EAMEKCKDAGLAK 161 (319)
T ss_dssp HHHHHHHHTTSEE
T ss_pred HHHHHHHHcCCEE
Confidence 6788999998766
No 8
>d1ghca_ a.4.5.13 (A:) Histone H1, globular domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=8.32 E-value=1.1e+02 Score=16.59 Aligned_cols=18 Identities=28% Similarity=0.359 Sum_probs=13.3
Q ss_pred hhHHH-HHHHhhccc-cccc
Q 034797 6 RAWIV-GAVEALKDQ-GFCR 23 (83)
Q Consensus 6 ~~w~v-gaVealKDQ-G~CR 23 (83)
-..|| .|+.+|+|. |.-+
T Consensus 6 y~~MI~eAI~al~er~GsS~ 25 (75)
T d1ghca_ 6 VTELITKAVSASKERKGLSL 25 (75)
T ss_dssp HHHHHHHHHHHCSSSSCCTT
T ss_pred HHHHHHHHHHHcCCCCCcCH
Confidence 34566 899999999 7543
No 9
>d1hsta_ a.4.5.13 (A:) Histone H5, globular domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=8.14 E-value=1.3e+02 Score=16.17 Aligned_cols=15 Identities=27% Similarity=0.388 Sum_probs=11.5
Q ss_pred hHHH-HHHHhhccc-cc
Q 034797 7 AWIV-GAVEALKDQ-GF 21 (83)
Q Consensus 7 ~w~v-gaVealKDQ-G~ 21 (83)
..|| .|+++|+|. |.
T Consensus 6 ~~MI~eAI~al~er~Gs 22 (74)
T d1hsta_ 6 SEMIAAAIRAEKSRGGS 22 (74)
T ss_dssp HHHHHHHHHTCCCSSCE
T ss_pred HHHHHHHHHHcCCCCCc
Confidence 3566 889999998 74
No 10
>d1usta_ a.4.5.13 (A:) Histone H1 homologue Hho1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=8.10 E-value=72 Score=18.13 Aligned_cols=20 Identities=35% Similarity=0.503 Sum_probs=0.0
Q ss_pred HHH-HHHHhhccc-ccccchhhhH
Q 034797 8 WIV-GAVEALKDQ-GFCRWNYTLK 29 (83)
Q Consensus 8 w~v-gaVealKDQ-G~CRWn~alr 29 (83)
.|| -|+.+|+|. |.++ .+|+
T Consensus 11 ~MI~eAI~~l~er~GsS~--~aI~ 32 (92)
T d1usta_ 11 ELIIEGLTALKERKGSSR--PALK 32 (92)
T ss_dssp HHHHHHHTTTTTTSCEEH--HHHH
T ss_pred HHHHHHHHHcCCCCCCCH--HHHH
Done!