Query 034805
Match_columns 82
No_of_seqs 55 out of 57
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 10:36:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034805.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034805hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pn5a1 a.77.1.5 (A:59-151) NA 59.6 9.6 0.0007 22.4 4.9 48 21-69 16-63 (93)
2 d2dlxa1 c.47.1.24 (A:1-147) UB 46.7 13 0.00098 22.7 4.2 32 7-38 103-139 (147)
3 d1h3oa_ a.22.1.3 (A:) TAF(II)- 44.7 6.1 0.00044 22.0 2.0 34 20-57 2-35 (50)
4 d1snla_ a.39.1.7 (A:) Nucleobi 40.5 11 0.00077 21.3 2.7 56 19-80 31-86 (99)
5 d2fwha1 c.47.1.1 (A:428-544) T 39.3 18 0.0013 20.1 3.6 26 7-32 84-116 (117)
6 d1w6ta1 c.1.11.1 (A:138-433) E 38.5 6.4 0.00047 27.9 1.7 34 5-38 113-149 (296)
7 d1ucpa_ a.77.1.5 (A:) Apoptosi 34.3 28 0.0021 20.0 4.1 48 21-69 15-62 (91)
8 d1a6qa2 d.219.1.1 (A:2-296) Pr 32.5 15 0.0011 24.3 2.9 47 6-68 229-275 (295)
9 d1s35a1 a.7.1.1 (A:1063-1168) 30.6 26 0.0019 19.0 3.3 29 23-55 8-36 (106)
10 d2akza1 c.1.11.1 (A:140-433) E 27.5 22 0.0016 24.9 3.1 34 5-38 113-148 (294)
11 d2fcta1 b.82.2.9 (A:3-310) Syr 26.0 16 0.0011 23.6 1.9 25 3-33 13-37 (308)
12 d1wy7a1 c.66.1.32 (A:4-204) Hy 25.6 27 0.002 22.1 3.0 37 29-68 4-40 (201)
13 d2fyma1 c.1.11.1 (A:140-431) E 25.5 21 0.0016 25.0 2.7 32 5-38 114-145 (292)
14 d2ptza1 c.1.11.1 (A:139-429) E 25.2 19 0.0014 25.1 2.4 23 16-38 126-148 (291)
15 d1x2la1 a.35.1.7 (A:9-95) Home 24.7 54 0.004 19.3 4.2 24 14-37 2-25 (87)
16 d1cuna2 a.7.1.1 (A:116-219) Sp 24.1 35 0.0025 18.5 3.0 29 22-54 5-33 (104)
17 d2hg7a1 d.186.2.1 (A:1-60) Pha 24.1 24 0.0017 20.1 2.2 18 20-37 40-57 (60)
18 d1ueba2 b.40.4.5 (A:64-126) El 23.9 14 0.0011 20.3 1.2 28 2-29 10-37 (63)
19 d2al1a1 c.1.11.1 (A:142-436) E 23.9 24 0.0017 24.8 2.7 22 17-38 128-149 (295)
20 d1rrma_ e.22.1.2 (A:) Lactalde 23.4 25 0.0018 24.1 2.7 38 24-68 320-357 (385)
21 d1klpa_ a.28.1.1 (A:) Acyl car 23.3 36 0.0026 19.5 3.1 18 21-38 3-20 (115)
22 d2a1xa1 b.82.2.9 (A:43-338) Ph 22.4 26 0.0019 22.1 2.5 21 5-30 20-40 (296)
23 d1rtya_ a.25.2.2 (A:) Putative 21.9 35 0.0026 21.6 3.0 44 18-68 61-108 (161)
24 d1iwga3 d.58.44.1 (A:567-673) 21.7 63 0.0046 18.1 4.0 33 7-39 60-94 (107)
25 d1qyra_ c.66.1.24 (A:) High le 21.2 13 0.00098 25.0 0.8 14 66-79 22-35 (252)
26 d1u5pa2 a.7.1.1 (A:1772-1872) 20.8 53 0.0038 17.4 3.3 26 23-52 7-32 (101)
27 d1yuba_ c.66.1.24 (A:) rRNA ad 20.3 12 0.00089 25.0 0.4 13 67-79 31-43 (245)
28 d1szqa_ e.44.1.1 (A:) 2-methyl 20.2 35 0.0026 24.1 3.0 40 15-71 417-457 (473)
29 d1zfsa1 a.39.1.2 (A:1-93) Calc 20.2 30 0.0022 19.2 2.2 45 20-81 27-71 (93)
No 1
>d1pn5a1 a.77.1.5 (A:59-151) NALP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.58 E-value=9.6 Score=22.42 Aligned_cols=48 Identities=25% Similarity=0.321 Sum_probs=37.2
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChhhhccCCHHHHHHHHHHhccc
Q 034805 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCE 69 (82)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qa~~Lldt~CE 69 (82)
|+++|+.. .|..|.+.+-.-|+..+|+.--.-.+..+=|..|++.+.+
T Consensus 16 L~~~Elkk-FK~~L~~~~l~~~~~~Ip~~~le~ad~~dLa~lLv~~y~~ 63 (93)
T d1pn5a1 16 LKKEELKE-FQLLLANKAHSRSSSGETPAQPEKTSGMEVASYLVAQYGE 63 (93)
T ss_dssp CCHHHHHH-HHHHHHHHCTTCCSSCSCSSCCCCCSHHHHHHHHHHHTCH
T ss_pred ccHHHHHH-HHHHHcccccccCCCCCCHHHHhhCCHHHHHHHHHHHCCH
Confidence 67777764 5999988765556678888777777999999999988764
No 2
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.68 E-value=13 Score=22.68 Aligned_cols=32 Identities=13% Similarity=0.208 Sum_probs=26.8
Q ss_pred CceEEecCCCCcc-----ccCHHHHHHHHHHHHHhhh
Q 034805 7 ETYVLLEPGVEEK-----FVTEEELKARLKYWLENWA 38 (82)
Q Consensus 7 D~yVvLEp~~~Eq-----flT~~Ell~~Lk~~L~~~~ 38 (82)
-+++++.|...|. ++++++.+..|+..|...+
T Consensus 103 Pti~~idp~~ge~v~~~~~~~~~~fl~~L~~fl~~~~ 139 (147)
T d2dlxa1 103 PYVSILDPRTGQKLVEWHQLDVSSFLDQVTGFLGEHG 139 (147)
T ss_dssp SEEEEECTTTCCCCEEESSCCHHHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCCCeEecccCCCCHHHHHHHHHHHHhhCC
Confidence 4789999865555 7899999999999999874
No 3
>d1h3oa_ a.22.1.3 (A:) TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.66 E-value=6.1 Score=21.96 Aligned_cols=34 Identities=21% Similarity=0.347 Sum_probs=28.5
Q ss_pred ccCHHHHHHHHHHHHHhhhccCCCCCCChhhhccCCHH
Q 034805 20 FVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATID 57 (82)
Q Consensus 20 flT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~ 57 (82)
||.+..|..++.++-.+. |.+++++|...+=|-.
T Consensus 2 FL~~~~Lq~ri~~I~~k~----Gl~e~~~dV~~lISHA 35 (50)
T d1h3oa_ 2 FLLQAPLQRRILEIGKKH----GITELHPDVVSYVSHA 35 (50)
T ss_dssp CSCHHHHHHHHHHHHHTT----TCCEECTTHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHc----CCCccCHHHHHHHHHH
Confidence 899999999999998888 4579999988876543
No 4
>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.47 E-value=11 Score=21.29 Aligned_cols=56 Identities=16% Similarity=0.103 Sum_probs=31.0
Q ss_pred cccCHHHHHHHHHHHHHhhhccCCCCCCChhhhccCCHHHHHHHHHHhcccccccCCcceee
Q 034805 19 KFVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCELELQGDVGSIQ 80 (82)
Q Consensus 19 qflT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qa~~Lldt~CELEi~pg~~~lQ 80 (82)
-++|.+|+.+.|+..+...... ..+.+-.. .+..+..+.+-.-.-+++...+ |+|-
T Consensus 31 G~i~~~El~~~l~~~~~~~~~~----~~~~~~~~-~~~~~~~~~v~~~~~~~D~d~D-G~Is 86 (99)
T d1snla_ 31 GVLDEQELEALFTKELEKVYDP----KNEEDDMR-EMEEERLRMREHVMKNVDTNQD-RLVT 86 (99)
T ss_dssp SEEEHHHHHHHHHHHHHTTSCC----SSCSSHHH-HTTHHHHHHHHHHHHHTCSSCS-SEEE
T ss_pred CcCCHHHHHHHHHHHHHhcchh----hhhhhhhh-hhHHHHHHHHHHHHHHcCCCCC-CcCc
Confidence 4689999999999988776531 22221111 1222222333334445677666 6664
No 5
>d2fwha1 c.47.1.1 (A:428-544) Thiol:disulfide interchange protein DsbD, C-terminal domain (DsbD-gamma) {Escherichia coli [TaxId: 562]}
Probab=39.31 E-value=18 Score=20.14 Aligned_cols=26 Identities=23% Similarity=0.376 Sum_probs=19.0
Q ss_pred CceEEecCCCCc-------cccCHHHHHHHHHH
Q 034805 7 ETYVLLEPGVEE-------KFVTEEELKARLKY 32 (82)
Q Consensus 7 D~yVvLEp~~~E-------qflT~~Ell~~Lk~ 32 (82)
-+++++.++-.+ -++|+++++++|++
T Consensus 84 Pt~~~~~~~G~~~~~~~~~G~~~~~~~~~~l~~ 116 (117)
T d2fwha1 84 PTILFFDGQGQEHPQARVTGFMDAETFSAHLRD 116 (117)
T ss_dssp SEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred eEEEEEeCCCcEEecccccccCCHHHHHHHHhc
Confidence 478889775322 26789999999985
No 6
>d1w6ta1 c.1.11.1 (A:138-433) Enolase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=38.48 E-value=6.4 Score=27.94 Aligned_cols=34 Identities=18% Similarity=0.080 Sum_probs=25.0
Q ss_pred ccCceEEe---cCCCCccccCHHHHHHHHHHHHHhhh
Q 034805 5 RTETYVLL---EPGVEEKFVTEEELKARLKYWLENWA 38 (82)
Q Consensus 5 q~D~yVvL---Ep~~~EqflT~~Ell~~Lk~~L~~~~ 38 (82)
..+.|+.- ..+.+.+++|++|+.+.+++|+.++|
T Consensus 113 ~~~~~~Y~~~~~e~~~~~~~s~~elid~y~~l~~~YP 149 (296)
T d1w6ta1 113 DKERKVYDYTKFEGEGAAVRTSAEQIDYLEELVNKYP 149 (296)
T ss_dssp C--CCCEETHHHHCTTCCEECHHHHHHHHHHHHHHSC
T ss_pred cCCCceeeeccccCCcccccCHHHHHHHHHHHHhcCC
Confidence 44455442 23556778999999999999999998
No 7
>d1ucpa_ a.77.1.5 (A:) Apoptosis-associated speck-like protein Asc {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.34 E-value=28 Score=20.05 Aligned_cols=48 Identities=23% Similarity=0.181 Sum_probs=38.3
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChhhhccCCHHHHHHHHHHhccc
Q 034805 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCE 69 (82)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qa~~Lldt~CE 69 (82)
|+++|+ .++|..|.+.+-.-|+..+|+.--.-.+..+=|..|++.+++
T Consensus 15 L~~~El-kkFK~~L~~~~l~~~~~~Ip~~~le~ad~~dladlLv~~y~~ 62 (91)
T d1ucpa_ 15 LTAEEL-KKFKLKLLSVPLREGYGRIPRGALLSMDALDLTDKLVSFYLE 62 (91)
T ss_dssp SCHHHH-HHHHHHTTTSCCCSSSCCCCHHHHHHCCHHHHHHHHHHTSCH
T ss_pred ccHHHH-HHHHHHHCcccccccCCCCCHHHHhhCCHHHHHHHHHHHCCH
Confidence 566665 467888888765556778999888888999999999998875
No 8
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.47 E-value=15 Score=24.25 Aligned_cols=47 Identities=13% Similarity=0.147 Sum_probs=34.5
Q ss_pred cCceEEecCCCCccccCHHHHHHHHHHHHHhhhccCCCCCCChhhhccCCHHHHHHHHHHhcc
Q 034805 6 TETYVLLEPGVEEKFVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVC 68 (82)
Q Consensus 6 ~D~yVvLEp~~~EqflT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qa~~Lldt~C 68 (82)
.|.|+||-.+-==..||.+|+...++..+..- .+++++|+.|++.+-
T Consensus 229 ~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~----------------~~~~~~a~~Lv~~A~ 275 (295)
T d1a6qa2 229 DDQFIILACDGIWDVMGNEELCDFVRSRLEVT----------------DDLEKVCNEVVDTCL 275 (295)
T ss_dssp TEEEEEEECHHHHTTSCHHHHHHHHHHHHTTC----------------CCHHHHHHHHHHHHH
T ss_pred cceeEeeecCcccccCCHHHHHHHHHHHhhcC----------------CCHHHHHHHHHHHHH
Confidence 45688888765556799999998887765433 356788999988764
No 9
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.62 E-value=26 Score=18.95 Aligned_cols=29 Identities=17% Similarity=0.223 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCChhhhccCC
Q 034805 23 EEELKARLKYWLENWAGQVGKGGLPPDLAKFAT 55 (82)
Q Consensus 23 ~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s 55 (82)
..++..||.+....... ..+|.|+....+
T Consensus 8 ~~~l~~Wl~~~e~~l~~----~~~~~d~~~~~~ 36 (106)
T d1s35a1 8 LDDFQAWLSITQKAVAS----EDMPESLPEAEQ 36 (106)
T ss_dssp HHHHHHHHHHHHHHHHC----CCCCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC----CCCCCCHHHHHH
Confidence 46788888887777654 367776654333
No 10
>d2akza1 c.1.11.1 (A:140-433) Enolase {Human (Homo sapiens), gamma isoform [TaxId: 9606]}
Probab=27.49 E-value=22 Score=24.93 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=25.8
Q ss_pred ccCceEEe--cCCCCccccCHHHHHHHHHHHHHhhh
Q 034805 5 RTETYVLL--EPGVEEKFVTEEELKARLKYWLENWA 38 (82)
Q Consensus 5 q~D~yVvL--Ep~~~EqflT~~Ell~~Lk~~L~~~~ 38 (82)
..+.|.+= .+..+-+++|++|+.+.+++|.+++|
T Consensus 113 ~~~kY~~~~~~~~~~~~~~t~delid~y~~l~~kYP 148 (294)
T d2akza1 113 RDGKYDLDFKSPTDPSRYITGDQLGALYQDFVRDYP 148 (294)
T ss_dssp ETTEECTTTTSSCCGGGCBCHHHHHHHHHHHHHHSC
T ss_pred hcCcceeeecccCCccceecHHHHHHHHHHHhcccC
Confidence 34455542 12445789999999999999999998
No 11
>d2fcta1 b.82.2.9 (A:3-310) Syringomycin biosynthesis enzyme 2, SyrB2 {Pseudomonas syringae pv. syringae [TaxId: 321]}
Probab=26.04 E-value=16 Score=23.61 Aligned_cols=25 Identities=16% Similarity=0.153 Sum_probs=19.6
Q ss_pred ccccCceEEecCCCCccccCHHHHHHHHHHH
Q 034805 3 YSRTETYVLLEPGVEEKFVTEEELKARLKYW 33 (82)
Q Consensus 3 y~q~D~yVvLEp~~~EqflT~~Ell~~Lk~~ 33 (82)
| .+|.||++ +.++|++|+.+..+..
T Consensus 13 f-~~~Gyl~i-----~~~~s~~ei~~i~~~~ 37 (308)
T d2fcta1 13 F-EKNGFIGP-----FDAYSPEEMKETWKRT 37 (308)
T ss_dssp H-HHHSEEEE-----EESSCHHHHHHHHHHH
T ss_pred H-HhCCEEEC-----cCccCHHHHHHHHHHH
Confidence 5 67899987 6789999987766554
No 12
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.64 E-value=27 Score=22.06 Aligned_cols=37 Identities=19% Similarity=0.064 Sum_probs=25.8
Q ss_pred HHHHHHHhhhccCCCCCCChhhhccCCHHHHHHHHHHhcc
Q 034805 29 RLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVC 68 (82)
Q Consensus 29 ~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qa~~Lldt~C 68 (82)
.|..+|++.++ |..-=..|..|.|....|.+++..++
T Consensus 4 ~l~~~l~~~~~---f~~~~~~l~qy~Tp~~~a~~~~~~~~ 40 (201)
T d1wy7a1 4 ELAIALSKLKG---FKNPKVWLEQYRTPGNAASELLWLAY 40 (201)
T ss_dssp HHHHHHHTSCC---CSSCCGGGTCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHccCCC---CCCCCcccccCCCCHHHHHHHHHHHH
Confidence 36667777754 44333478888888888888877666
No 13
>d2fyma1 c.1.11.1 (A:140-431) Enolase {Escherichia coli [TaxId: 562]}
Probab=25.45 E-value=21 Score=25.04 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=24.6
Q ss_pred ccCceEEecCCCCccccCHHHHHHHHHHHHHhhh
Q 034805 5 RTETYVLLEPGVEEKFVTEEELKARLKYWLENWA 38 (82)
Q Consensus 5 q~D~yVvLEp~~~EqflT~~Ell~~Lk~~L~~~~ 38 (82)
..+.|...- ...+++|++|+.+.++.|++++|
T Consensus 114 ~~~~y~~~~--~~~~~~t~~eli~~y~~l~~~yP 145 (292)
T d2fyma1 114 KDGKYVLAG--EGNKAFTSEEFTHFLEELTKQYP 145 (292)
T ss_dssp ETTEEEEGG--GTTEEECHHHHHHHHHHHHHHSC
T ss_pred ccccceecc--CCCccccHHHHHHHHHHHHhcCc
Confidence 456665432 22467999999999999999998
No 14
>d2ptza1 c.1.11.1 (A:139-429) Enolase {Trypanosoma brucei [TaxId: 5691]}
Probab=25.21 E-value=19 Score=25.14 Aligned_cols=23 Identities=26% Similarity=0.549 Sum_probs=20.9
Q ss_pred CCccccCHHHHHHHHHHHHHhhh
Q 034805 16 VEEKFVTEEELKARLKYWLENWA 38 (82)
Q Consensus 16 ~~EqflT~~Ell~~Lk~~L~~~~ 38 (82)
.+-+++|++|+.+.+++|+.++|
T Consensus 126 ~~~~~ls~~elid~y~~l~~~YP 148 (291)
T d2ptza1 126 PEPTWVTAEQLRETYCKWAHDYP 148 (291)
T ss_dssp SSCCEECHHHHHHHHHHHHHHSC
T ss_pred cCcchhhHHHHHHHHHHHhhccc
Confidence 34578999999999999999998
No 15
>d1x2la1 a.35.1.7 (A:9-95) Homeobox protein Cux-2, CUTL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.72 E-value=54 Score=19.31 Aligned_cols=24 Identities=29% Similarity=0.387 Sum_probs=22.4
Q ss_pred CCCCccccCHHHHHHHHHHHHHhh
Q 034805 14 PGVEEKFVTEEELKARLKYWLENW 37 (82)
Q Consensus 14 p~~~EqflT~~Ell~~Lk~~L~~~ 37 (82)
|+.+++-|...|+-.+++..|.+.
T Consensus 2 ~~~~~e~ldT~~i~~~v~~~L~~~ 25 (87)
T d1x2la1 2 PGAEEEQLDTAEIAFQVKEQLLKH 25 (87)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHT
T ss_pred CCCCcCCCCHHHHHHHHHHHHHHc
Confidence 677889999999999999999998
No 16
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.13 E-value=35 Score=18.51 Aligned_cols=29 Identities=21% Similarity=0.073 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHHhhhccCCCCCCChhhhccC
Q 034805 22 TEEELKARLKYWLENWAGQVGKGGLPPDLAKFA 54 (82)
Q Consensus 22 T~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~ 54 (82)
+.+|++.||++....... .++|.|+....
T Consensus 5 ~~~e~~~Wl~e~~~~l~~----~~~g~d~~~v~ 33 (104)
T d1cuna2 5 NVEEEEAWINEKMTLVAS----EDYGDTLAAIQ 33 (104)
T ss_dssp HHHHHHHHHHHHHHHHTC----CCCCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC----CCCCCCHHHHH
Confidence 357889999988777754 36777765443
No 17
>d2hg7a1 d.186.2.1 (A:1-60) Phage-like element PbsX protein XkdW {Bacillus subtilis [TaxId: 1423]}
Probab=24.05 E-value=24 Score=20.07 Aligned_cols=18 Identities=22% Similarity=0.145 Sum_probs=15.1
Q ss_pred ccCHHHHHHHHHHHHHhh
Q 034805 20 FVTEEELKARLKYWLENW 37 (82)
Q Consensus 20 flT~~Ell~~Lk~~L~~~ 37 (82)
.=|++||.+|-++++++-
T Consensus 40 ~PTe~EL~~~w~e~q~np 57 (60)
T d2hg7a1 40 LPTQAELETWWEELQKNP 57 (60)
T ss_dssp CCCHHHHHHHHHHHHHSC
T ss_pred CCcHHHHHHHHHHHhhCC
Confidence 458999999999998764
No 18
>d1ueba2 b.40.4.5 (A:64-126) Elongation factor P middle and C-terminal domains {Thermus thermophilus HB8 [TaxId: 300852]}
Probab=23.92 E-value=14 Score=20.32 Aligned_cols=28 Identities=18% Similarity=0.266 Sum_probs=22.2
Q ss_pred CccccCceEEecCCCCccccCHHHHHHH
Q 034805 2 AYSRTETYVLLEPGVEEKFVTEEELKAR 29 (82)
Q Consensus 2 my~q~D~yVvLEp~~~EqflT~~Ell~~ 29 (82)
+|.+.|+||++.+..=||+-=+++++..
T Consensus 10 LY~dgd~~~FMd~etyEQi~v~~~~i~~ 37 (63)
T d1ueba2 10 LYPEGEEMVFMDLETYEQFAVPRSRVVG 37 (63)
T ss_dssp EEEETTEEEEEETTTCCEEEEEGGGBTT
T ss_pred EEeCCCeEEEEeCCCccEEEcCHHHcCh
Confidence 5888999999999999998655555544
No 19
>d2al1a1 c.1.11.1 (A:142-436) Enolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.91 E-value=24 Score=24.80 Aligned_cols=22 Identities=14% Similarity=0.315 Sum_probs=20.3
Q ss_pred CccccCHHHHHHHHHHHHHhhh
Q 034805 17 EEKFVTEEELKARLKYWLENWA 38 (82)
Q Consensus 17 ~EqflT~~Ell~~Lk~~L~~~~ 38 (82)
+-+++|++|+.+.+++|+.++|
T Consensus 128 ~~~~~s~~elid~y~~li~~YP 149 (295)
T d2al1a1 128 KSKWLTGPQLADLYHSLMKRYP 149 (295)
T ss_dssp GGGCBCHHHHHHHHHHHHHHSC
T ss_pred CccccchHHHHHHHHHHHHhCC
Confidence 3578999999999999999998
No 20
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=23.38 E-value=25 Score=24.10 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCChhhhccCCHHHHHHHHHHhcc
Q 034805 24 EELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVC 68 (82)
Q Consensus 24 ~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qa~~Lldt~C 68 (82)
+++.++++.+..+. .||..|+.+.=-++....+.+.++
T Consensus 320 ~~~i~~i~~~~~~l-------glP~~L~d~Gv~~~~l~~ia~~a~ 357 (385)
T d1rrma_ 320 NAAVEAVFALNRDV-------GIPPHLRDVGVRKEDIPALAQAAL 357 (385)
T ss_dssp HHHHHHHHHHHHHT-------TCCSSGGGGTCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-------CCCCCHHHcCCCHHHHHHHHHHHH
Confidence 35677888888888 799988877533444555555554
No 21
>d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.32 E-value=36 Score=19.46 Aligned_cols=18 Identities=33% Similarity=0.374 Sum_probs=13.9
Q ss_pred cCHHHHHHHHHHHHHhhh
Q 034805 21 VTEEELKARLKYWLENWA 38 (82)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~ 38 (82)
+|.+|+.++|+.++++.-
T Consensus 3 ~t~~~i~~~l~~iv~~~l 20 (115)
T d1klpa_ 3 VTQEEIIAGIAEIIEEVT 20 (115)
T ss_dssp CCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 677888888888887764
No 22
>d2a1xa1 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.44 E-value=26 Score=22.09 Aligned_cols=21 Identities=5% Similarity=0.363 Sum_probs=15.5
Q ss_pred ccCceEEecCCCCccccCHHHHHHHH
Q 034805 5 RTETYVLLEPGVEEKFVTEEELKARL 30 (82)
Q Consensus 5 q~D~yVvLEp~~~EqflT~~Ell~~L 30 (82)
+.+.|||+ +.++|++++.+-.
T Consensus 20 ~~~Gyvvi-----~~~l~~~~~~~l~ 40 (296)
T d2a1xa1 20 EENGFLVI-----KNLVPDADIQRFR 40 (296)
T ss_dssp HHHSEEEE-----TTCSCHHHHHHHH
T ss_pred HHCCEEEc-----cCcCCHHHHHHHH
Confidence 67899998 5688887765443
No 23
>d1rtya_ a.25.2.2 (A:) Putative ATP-binding cobalamin adenosyltransferase YvqK {Bacillus subtilis [TaxId: 1423]}
Probab=21.90 E-value=35 Score=21.59 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=30.0
Q ss_pred ccccCHHHHHHHHHHHHHhhhccCCCCCCChhhhcc----CCHHHHHHHHHHhcc
Q 034805 18 EKFVTEEELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (82)
Q Consensus 18 EqflT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qa~~Lldt~C 68 (82)
..-++++ -.+||..++..+.. .||+ +..| +|...++-|+-.|.|
T Consensus 61 ~~~i~~~-~v~~LE~~ID~~~~-----~lp~-l~~FILPGGs~~~A~lh~aRtv~ 108 (161)
T d1rtya_ 61 DYKLTEE-SVSFLETRIDAYTA-----EAPE-LKKFILPGGSKCASLLHIARTIT 108 (161)
T ss_dssp CCCCCHH-HHHHHHHHHHHHHH-----HSCC-CCSCBCSCSSHHHHHHHHHHHHH
T ss_pred ccccCHH-HHHHHHHHHHHHHh-----hhcc-ccceecCCCCHHHHHHHHHHHHH
Confidence 3345654 47788888888764 3432 3333 788899999999988
No 24
>d1iwga3 d.58.44.1 (A:567-673) Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains {Escherichia coli [TaxId: 562]}
Probab=21.69 E-value=63 Score=18.06 Aligned_cols=33 Identities=12% Similarity=0.044 Sum_probs=26.5
Q ss_pred CceEEecC-C-CCccccCHHHHHHHHHHHHHhhhc
Q 034805 7 ETYVLLEP-G-VEEKFVTEEELKARLKYWLENWAG 39 (82)
Q Consensus 7 D~yVvLEp-~-~~EqflT~~Ell~~Lk~~L~~~~~ 39 (82)
-.||.|.| + ...+-.|..++..+|...|.+.|+
T Consensus 60 ~~~v~Lkpw~eR~~~~~s~~~i~~~l~~~~~~i~~ 94 (107)
T d1iwga3 60 IAFVSLKDWADRPGEENKVEAITMRATRAFSQIKD 94 (107)
T ss_dssp EEEEEECCGGGCCSTTSSHHHHHHHHHHHHHHSCS
T ss_pred eeeeecccchhccccccCHHHHHHHHHHHHcCCCC
Confidence 35889988 2 333577999999999999999986
No 25
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein KsgA {Escherichia coli [TaxId: 562]}
Probab=21.22 E-value=13 Score=24.96 Aligned_cols=14 Identities=7% Similarity=0.223 Sum_probs=10.7
Q ss_pred hcccccccCCccee
Q 034805 66 NVCELELQGDVGSI 79 (82)
Q Consensus 66 t~CELEi~pg~~~l 79 (82)
+-+-||||||.|+|
T Consensus 22 ~d~vlEIGpG~G~L 35 (252)
T d1qyra_ 22 GQAMVEIGPGLAAL 35 (252)
T ss_dssp TCCEEEECCTTTTT
T ss_pred CCEEEEECCCchHH
Confidence 34668999998765
No 26
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=20.82 E-value=53 Score=17.38 Aligned_cols=26 Identities=12% Similarity=-0.034 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCChhhhc
Q 034805 23 EEELKARLKYWLENWAGQVGKGGLPPDLAK 52 (82)
Q Consensus 23 ~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k 52 (82)
.++++.||.+....... .+.|.|+..
T Consensus 7 ~~el~~Wl~e~~~~l~s----~~~g~d~~~ 32 (101)
T d1u5pa2 7 MDDEESWIKEKKLLVSS----EDYGRDLTG 32 (101)
T ss_dssp HHHHHHHHHHHHHHHTC----CCCCSSHHH
T ss_pred HHHHHHHHHHHHHHhhC----CCCCCCHHH
Confidence 46888888888777754 356666543
No 27
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus pneumoniae, Ermam [TaxId: 1313]}
Probab=20.30 E-value=12 Score=25.03 Aligned_cols=13 Identities=15% Similarity=0.171 Sum_probs=10.0
Q ss_pred cccccccCCccee
Q 034805 67 VCELELQGDVGSI 79 (82)
Q Consensus 67 ~CELEi~pg~~~l 79 (82)
-.-||||||-|.+
T Consensus 31 d~VLEIGpG~G~L 43 (245)
T d1yuba_ 31 DTVYEIGTGKGHL 43 (245)
T ss_dssp EEEEECSCCCSSC
T ss_pred CeEEEECCCccHH
Confidence 3459999998765
No 28
>d1szqa_ e.44.1.1 (A:) 2-methylcitrate dehydratase PrpD {Escherichia coli [TaxId: 562]}
Probab=20.23 E-value=35 Score=24.13 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=29.4
Q ss_pred CCCcc-ccCHHHHHHHHHHHHHhhhccCCCCCCChhhhccCCHHHHHHHHHHhccccc
Q 034805 15 GVEEK-FVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCELE 71 (82)
Q Consensus 15 ~~~Eq-flT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qa~~Lldt~CELE 71 (82)
|.|+. -+|.+|+.+|.+...+.. +|. ++++.+++....||
T Consensus 417 G~p~~~p~~~~~l~~KF~~~~~~~--------l~~---------~~~~~i~~~~~~le 457 (473)
T d1szqa_ 417 GHARRRQDGIPKLVDKFKINLARQ--------FPT---------RQQQRILEVSLDRA 457 (473)
T ss_dssp TSGGGHHHHHHHHHHHHHHHHHHH--------SCH---------HHHHHHHHHHHCHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhh--------CCH---------HHHHHHHHHHhCHh
Confidence 88886 778899999999988865 554 55666666665554
No 29
>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}
Probab=20.20 E-value=30 Score=19.21 Aligned_cols=45 Identities=27% Similarity=0.387 Sum_probs=27.0
Q ss_pred ccCHHHHHHHHHHHHHhhhccCCCCCCChhhhccCCHHHHHHHHHHhcccccccCCcceeee
Q 034805 20 FVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCELELQGDVGSIQC 81 (82)
Q Consensus 20 flT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qa~~Lldt~CELEi~pg~~~lQW 81 (82)
++|.+|+...|+........ - +..++.++.++ .++|...+ |.|.+
T Consensus 27 ~is~~El~~~L~~~~~~~~~------~-------~~~~~~~~~~~---~~~D~d~d-G~Idf 71 (93)
T d1zfsa1 27 KLSKKELKDLLQTELSSFLD------V-------QKDADAVDKIM---KELDENGD-GEVDF 71 (93)
T ss_dssp SEEHHHHHHHHHHHSTTTSC------C-------SSCHHHHHHHH---HHHTTTCC-SEECS
T ss_pred EecHHHHHHHHHHhcccccc------c-------CCCHHHHHHHH---HHHcCCCC-CCCcH
Confidence 79999988877765554421 1 11234555554 45677777 66654
Done!