Query 034814
Match_columns 82
No_of_seqs 104 out of 332
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 10:45:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034814.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034814hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1m6e_X S-adenosyl-L-methionnin 99.9 1.2E-27 3.9E-32 180.5 5.7 80 3-82 168-256 (359)
2 2efj_A 3,7-dimethylxanthine me 99.9 2E-26 6.8E-31 175.1 7.4 79 3-82 184-268 (384)
3 3b5i_A S-adenosyl-L-methionine 99.9 5.9E-25 2E-29 166.3 7.9 79 3-82 185-274 (374)
4 4df3_A Fibrillarin-like rRNA/T 83.5 0.7 2.4E-05 32.3 2.6 49 24-72 162-210 (233)
5 2v1n_A KIN17, protein KIN homo 78.9 1.9 6.6E-05 27.6 3.2 27 5-31 9-35 (111)
6 2p8j_A S-adenosylmethionine-de 71.3 3.7 0.00013 26.1 3.2 29 21-49 105-133 (209)
7 3dli_A Methyltransferase; PSI- 69.7 3.8 0.00013 27.0 3.0 27 22-48 118-144 (240)
8 3hem_A Cyclopropane-fatty-acyl 69.3 4.1 0.00014 27.9 3.2 29 21-49 160-188 (302)
9 3id6_C Fibrillarin-like rRNA/T 67.7 2.6 9E-05 29.2 2.0 39 33-71 170-208 (232)
10 1kpg_A CFA synthase;, cyclopro 65.3 4.7 0.00016 27.2 2.8 29 21-49 145-173 (287)
11 3ccf_A Cyclopropane-fatty-acyl 64.7 3.3 0.00011 28.0 2.0 27 22-48 132-158 (279)
12 3h2b_A SAM-dependent methyltra 64.5 3.3 0.00011 26.4 1.8 28 22-49 119-146 (203)
13 2pxx_A Uncharacterized protein 64.4 6.4 0.00022 24.8 3.2 29 20-48 135-163 (215)
14 3e23_A Uncharacterized protein 64.3 6.5 0.00022 25.1 3.3 29 21-49 118-146 (211)
15 3ujc_A Phosphoethanolamine N-m 64.2 5.9 0.0002 26.0 3.1 29 21-49 136-164 (266)
16 2kw5_A SLR1183 protein; struct 64.1 7.7 0.00026 24.5 3.6 29 21-49 108-136 (202)
17 2gs9_A Hypothetical protein TT 61.3 4.4 0.00015 25.9 2.0 27 22-48 110-136 (211)
18 2p35_A Trans-aconitate 2-methy 60.3 4.4 0.00015 26.7 1.9 27 21-47 109-135 (259)
19 2fk8_A Methoxy mycolic acid sy 60.2 7.4 0.00025 26.7 3.1 29 21-49 171-199 (318)
20 1nt2_A Fibrillarin-like PRE-rR 59.4 6.9 0.00024 25.9 2.8 45 25-69 142-186 (210)
21 3sm3_A SAM-dependent methyltra 58.6 8 0.00027 24.7 2.9 25 24-48 121-145 (235)
22 1dus_A MJ0882; hypothetical pr 58.6 7.8 0.00027 23.8 2.8 27 21-47 134-160 (194)
23 4gel_A Mitochondrial cardiolip 58.5 3.6 0.00012 27.2 1.2 26 8-33 191-216 (220)
24 2p7i_A Hypothetical protein; p 58.4 4.7 0.00016 26.0 1.8 27 22-48 118-145 (250)
25 3g2m_A PCZA361.24; SAM-depende 58.1 6.9 0.00024 26.7 2.7 28 21-48 167-194 (299)
26 3thr_A Glycine N-methyltransfe 57.7 6.6 0.00022 26.5 2.5 26 21-46 152-177 (293)
27 3ou2_A SAM-dependent methyltra 57.2 8 0.00028 24.5 2.7 27 22-48 124-150 (218)
28 3dh0_A SAM dependent methyltra 56.5 19 0.00063 22.9 4.4 29 22-50 121-149 (219)
29 1nvp_D Transcription initiatio 55.5 6.8 0.00023 24.7 2.1 18 57-74 12-29 (108)
30 3bus_A REBM, methyltransferase 55.1 6 0.0002 26.3 1.9 28 22-49 144-171 (273)
31 3i9f_A Putative type 11 methyl 54.3 7.8 0.00027 23.8 2.2 29 22-50 90-118 (170)
32 1y8c_A S-adenosylmethionine-de 53.7 8.8 0.0003 24.7 2.5 26 21-46 119-144 (246)
33 1xtp_A LMAJ004091AAA; SGPP, st 53.5 11 0.00038 24.5 3.0 27 21-47 174-200 (254)
34 1ri5_A MRNA capping enzyme; me 53.3 8.1 0.00028 25.8 2.3 28 20-47 150-177 (298)
35 2jqt_A H-NS/STPA-binding prote 53.1 7.1 0.00024 23.1 1.7 21 21-41 34-57 (71)
36 3ic7_A Putative transcriptiona 53.0 10 0.00035 23.5 2.6 49 17-74 14-67 (126)
37 3pfg_A N-methyltransferase; N, 52.7 8.1 0.00028 25.7 2.2 26 21-46 128-153 (263)
38 2aot_A HMT, histamine N-methyl 52.2 6.9 0.00024 26.7 1.9 27 21-47 149-175 (292)
39 3bxo_A N,N-dimethyltransferase 52.1 8.4 0.00029 24.9 2.2 28 21-48 118-145 (239)
40 3e8s_A Putative SAM dependent 51.8 4.9 0.00017 25.6 1.0 28 22-49 130-157 (227)
41 3cgg_A SAM-dependent methyltra 51.7 13 0.00044 22.8 3.0 27 21-47 124-150 (195)
42 3ggd_A SAM-dependent methyltra 51.6 12 0.00043 24.3 3.0 27 22-48 141-167 (245)
43 3p9n_A Possible methyltransfer 51.6 17 0.0006 22.8 3.7 29 21-49 128-158 (189)
44 3mti_A RRNA methylase; SAM-dep 51.0 11 0.00038 23.5 2.6 25 22-46 113-137 (185)
45 3bgv_A MRNA CAP guanine-N7 met 50.8 9.2 0.00031 26.3 2.3 27 21-47 132-158 (313)
46 1fbn_A MJ fibrillarin homologu 50.1 23 0.00078 23.2 4.2 48 24-71 158-205 (230)
47 4ggj_A Mitochondrial cardiolip 49.8 12 0.0004 24.8 2.7 19 8-26 159-177 (196)
48 2rld_A Uncharacterized protein 49.7 5.7 0.0002 24.8 1.0 22 8-29 50-71 (121)
49 1wzn_A SAM-dependent methyltra 49.5 12 0.00042 24.4 2.8 26 21-46 122-147 (252)
50 3d2l_A SAM-dependent methyltra 49.2 13 0.00044 24.0 2.8 25 21-45 114-138 (243)
51 1ve3_A Hypothetical protein PH 49.0 12 0.00042 23.8 2.6 26 21-46 119-144 (227)
52 3ofk_A Nodulation protein S; N 48.8 12 0.0004 23.9 2.5 26 22-47 132-157 (216)
53 2o57_A Putative sarcosine dime 48.6 11 0.00037 25.5 2.4 29 22-50 165-193 (297)
54 1nh2_D Transcription initiatio 48.1 10 0.00035 24.4 2.1 18 57-74 16-33 (121)
55 3hnr_A Probable methyltransfer 48.1 22 0.00076 22.5 3.8 24 25-48 126-149 (220)
56 3uwp_A Histone-lysine N-methyl 47.7 6.4 0.00022 30.4 1.2 26 20-45 264-289 (438)
57 3kkz_A Uncharacterized protein 47.4 12 0.00043 24.8 2.5 28 22-49 128-155 (267)
58 2avn_A Ubiquinone/menaquinone 46.8 8.3 0.00028 25.7 1.6 27 21-47 129-155 (260)
59 3l8d_A Methyltransferase; stru 46.7 10 0.00035 24.5 2.0 28 22-49 131-158 (242)
60 3f4k_A Putative methyltransfer 46.4 12 0.00041 24.5 2.3 28 22-49 128-155 (257)
61 4hg2_A Methyltransferase type 46.3 8.6 0.00029 26.5 1.6 27 23-49 114-140 (257)
62 3dtn_A Putative methyltransfer 46.3 19 0.00065 23.2 3.2 25 24-48 128-152 (234)
63 2a14_A Indolethylamine N-methy 45.8 14 0.00048 24.9 2.6 27 21-47 174-200 (263)
64 2ld4_A Anamorsin; methyltransf 45.7 18 0.0006 22.4 2.9 25 22-46 79-103 (176)
65 1xmk_A Double-stranded RNA-spe 44.6 11 0.00038 22.2 1.7 25 57-81 40-66 (79)
66 3f8m_A GNTR-family protein tra 44.2 6.1 0.00021 27.2 0.6 49 15-74 15-68 (248)
67 3g5l_A Putative S-adenosylmeth 44.2 10 0.00034 24.9 1.6 26 21-46 122-147 (253)
68 3evz_A Methyltransferase; NYSG 44.0 16 0.00055 23.6 2.6 41 23-71 158-198 (230)
69 2xvm_A Tellurite resistance pr 43.9 13 0.00046 23.0 2.2 25 22-46 114-138 (199)
70 1vlm_A SAM-dependent methyltra 43.6 13 0.00043 24.1 2.0 27 22-48 117-143 (219)
71 2i62_A Nicotinamide N-methyltr 43.5 13 0.00046 24.2 2.2 26 21-46 175-200 (265)
72 3jwh_A HEN1; methyltransferase 43.3 21 0.00072 22.8 3.1 24 22-45 119-142 (217)
73 4htf_A S-adenosylmethionine-de 43.3 9.6 0.00033 25.7 1.5 26 22-47 151-176 (285)
74 1ej0_A FTSJ; methyltransferase 43.3 22 0.00076 21.1 3.0 24 24-47 116-139 (180)
75 3bwc_A Spermidine synthase; SA 43.2 40 0.0014 23.4 4.8 52 25-81 191-245 (304)
76 4dzr_A Protein-(glutamine-N5) 42.2 19 0.00066 22.4 2.7 24 23-46 143-166 (215)
77 1g8a_A Fibrillarin-like PRE-rR 42.1 34 0.0012 22.0 4.0 40 26-66 160-200 (227)
78 1m6y_A S-adenosyl-methyltransf 42.1 15 0.00051 26.2 2.4 25 20-44 221-245 (301)
79 2g72_A Phenylethanolamine N-me 42.0 13 0.00045 25.1 2.0 26 20-45 191-216 (289)
80 3e05_A Precorrin-6Y C5,15-meth 41.8 18 0.00062 23.0 2.6 41 22-71 120-160 (204)
81 4gek_A TRNA (CMO5U34)-methyltr 41.5 22 0.00075 24.4 3.1 26 22-47 156-181 (261)
82 3vc1_A Geranyl diphosphate 2-C 41.4 13 0.00046 25.5 2.0 28 23-50 200-227 (312)
83 2vdw_A Vaccinia virus capping 40.9 12 0.00042 26.2 1.8 26 22-47 147-172 (302)
84 3g5t_A Trans-aconitate 3-methy 40.8 13 0.00043 25.3 1.8 27 22-48 127-153 (299)
85 2ex4_A Adrenal gland protein A 40.7 24 0.00082 23.0 3.1 28 22-49 163-190 (241)
86 3m70_A Tellurite resistance pr 40.4 21 0.00071 24.0 2.8 28 22-49 201-228 (286)
87 3bkw_A MLL3908 protein, S-aden 40.3 13 0.00043 24.0 1.6 25 22-46 122-146 (243)
88 3cc8_A Putative methyltransfer 39.9 14 0.00048 23.4 1.8 26 22-47 108-133 (230)
89 1vl5_A Unknown conserved prote 39.9 17 0.00057 24.0 2.2 27 22-48 118-144 (260)
90 3lcc_A Putative methyl chlorid 39.8 16 0.00056 23.6 2.2 27 22-48 149-175 (235)
91 3dlc_A Putative S-adenosyl-L-m 39.4 12 0.0004 23.6 1.3 24 21-44 125-148 (219)
92 1xxl_A YCGJ protein; structura 38.8 17 0.00059 23.8 2.1 27 22-48 102-128 (239)
93 3orh_A Guanidinoacetate N-meth 38.8 15 0.00052 24.4 1.9 25 20-44 146-170 (236)
94 2yqz_A Hypothetical protein TT 38.7 13 0.00046 24.2 1.6 25 22-46 119-143 (263)
95 2i7c_A Spermidine synthase; tr 38.1 50 0.0017 22.7 4.6 53 24-81 172-226 (283)
96 1pjz_A Thiopurine S-methyltran 38.0 29 0.00098 22.4 3.1 25 22-46 118-142 (203)
97 3ocj_A Putative exported prote 37.9 27 0.00093 23.8 3.1 26 25-50 208-233 (305)
98 3jwg_A HEN1, methyltransferase 37.6 25 0.00086 22.4 2.8 23 22-44 119-141 (219)
99 2ipx_A RRNA 2'-O-methyltransfe 37.1 13 0.00044 24.3 1.3 47 25-71 163-209 (233)
100 3g07_A 7SK snRNA methylphospha 37.0 21 0.00072 24.4 2.4 27 19-45 195-221 (292)
101 2igt_A SAM dependent methyltra 36.3 35 0.0012 24.3 3.6 29 19-47 247-275 (332)
102 1l3i_A Precorrin-6Y methyltran 36.2 15 0.00051 22.5 1.4 41 22-71 112-152 (192)
103 3o4f_A Spermidine synthase; am 36.1 37 0.0013 24.4 3.7 51 26-81 180-232 (294)
104 1wxx_A TT1595, hypothetical pr 36.0 35 0.0012 24.5 3.6 30 17-46 298-327 (382)
105 2nyu_A Putative ribosomal RNA 35.9 25 0.00084 21.9 2.5 22 24-45 125-146 (196)
106 3e6s_A Ferritin; iron storage, 35.8 67 0.0023 20.8 4.7 41 9-49 36-76 (168)
107 3ajd_A Putative methyltransfer 35.7 38 0.0013 23.0 3.6 41 21-64 188-228 (274)
108 1u2z_A Histone-lysine N-methyl 35.4 24 0.00082 26.6 2.7 23 21-43 336-358 (433)
109 3eey_A Putative rRNA methylase 35.0 28 0.00095 21.8 2.6 25 22-46 117-141 (197)
110 2guz_A Mitochondrial import in 34.9 45 0.0015 18.5 3.3 17 5-21 26-42 (71)
111 1p91_A Ribosomal RNA large sub 34.9 13 0.00043 24.8 1.0 18 31-48 165-182 (269)
112 2fyt_A Protein arginine N-meth 34.2 17 0.00058 25.8 1.6 22 20-41 147-168 (340)
113 3lpm_A Putative methyltransfer 34.2 26 0.00088 23.4 2.5 25 20-44 152-176 (259)
114 2esr_A Methyltransferase; stru 34.1 35 0.0012 20.9 3.0 18 31-48 125-142 (177)
115 4fsd_A Arsenic methyltransfera 33.7 22 0.00076 25.5 2.2 28 22-49 181-208 (383)
116 4e2x_A TCAB9; kijanose, tetron 33.1 20 0.0007 25.6 1.9 25 22-46 186-210 (416)
117 1ixk_A Methyltransferase; open 32.9 70 0.0024 22.3 4.7 42 20-64 222-263 (315)
118 2zfu_A Nucleomethylin, cerebra 32.7 17 0.00059 23.1 1.3 26 22-47 129-154 (215)
119 3ka8_A Ferritin, middle subuni 32.4 1E+02 0.0035 19.9 5.4 41 9-49 46-86 (176)
120 3grz_A L11 mtase, ribosomal pr 31.7 24 0.00082 22.3 1.9 27 22-48 137-163 (205)
121 3hm2_A Precorrin-6Y C5,15-meth 31.7 32 0.0011 20.9 2.4 22 26-47 109-130 (178)
122 3qz3_A Ferritin; structural ge 31.6 99 0.0034 20.2 5.0 41 9-49 46-86 (184)
123 3iv6_A Putative Zn-dependent a 31.3 55 0.0019 22.7 3.8 24 21-45 126-149 (261)
124 3njr_A Precorrin-6Y methylase; 31.2 30 0.001 22.4 2.3 36 26-70 136-171 (204)
125 3uno_A Probable bacterioferrit 31.1 98 0.0034 20.4 5.0 40 9-48 42-81 (189)
126 1s3q_A Ferritin; ferroxidase, 31.0 1E+02 0.0035 19.8 5.0 40 9-48 39-78 (173)
127 1inl_A Spermidine synthase; be 30.9 80 0.0027 21.8 4.7 52 25-81 186-239 (296)
128 3tqn_A Transcriptional regulat 30.5 30 0.001 20.7 2.1 18 57-74 48-65 (113)
129 3q7e_A Protein arginine N-meth 30.4 15 0.00053 26.1 0.9 21 21-41 150-170 (349)
130 3tma_A Methyltransferase; thum 30.4 60 0.0021 22.8 4.0 27 19-45 292-318 (354)
131 4ham_A LMO2241 protein; struct 30.4 30 0.001 21.3 2.1 49 17-74 17-70 (134)
132 3neu_A LIN1836 protein; struct 30.3 30 0.001 21.2 2.1 18 57-74 52-69 (125)
133 2cih_A Ferritin heavy chain; a 30.2 1.2E+02 0.0039 19.8 5.4 43 8-50 49-91 (183)
134 4hc4_A Protein arginine N-meth 30.0 20 0.00069 26.5 1.5 21 21-41 166-186 (376)
135 2as0_A Hypothetical protein PH 30.0 41 0.0014 24.1 3.1 28 18-45 309-336 (396)
136 1wg8_A Predicted S-adenosylmet 30.0 32 0.0011 24.9 2.5 26 19-44 208-233 (285)
137 3gu3_A Methyltransferase; alph 29.9 22 0.00075 24.0 1.5 25 22-46 104-128 (284)
138 2pjd_A Ribosomal RNA small sub 29.4 33 0.0011 24.2 2.4 26 20-45 279-304 (343)
139 2gsc_A Putative uncharacterize 29.1 13 0.00043 23.4 0.2 22 8-29 54-75 (128)
140 3lbf_A Protein-L-isoaspartate 29.1 15 0.00051 23.4 0.5 15 32-46 162-176 (210)
141 2pt6_A Spermidine synthase; tr 29.0 71 0.0024 22.5 4.2 52 25-81 211-264 (321)
142 1x19_A CRTF-related protein; m 28.9 59 0.002 22.7 3.7 28 22-49 273-300 (359)
143 2v2p_A Ferritin light chain; m 28.8 99 0.0034 19.9 4.6 41 8-48 44-84 (174)
144 1o9g_A RRNA methyltransferase; 28.7 60 0.0021 21.3 3.6 23 22-44 192-214 (250)
145 3u81_A Catechol O-methyltransf 28.6 34 0.0012 22.1 2.2 21 25-46 152-172 (221)
146 1iy9_A Spermidine synthase; ro 28.4 85 0.0029 21.4 4.4 46 31-81 176-223 (275)
147 3iz6_V 40S ribosomal protein S 28.3 27 0.00093 22.0 1.6 18 57-74 75-92 (108)
148 3r0q_C Probable protein argini 27.9 16 0.00054 26.4 0.5 24 21-44 146-169 (376)
149 3adn_A Spermidine synthase; am 27.7 65 0.0022 22.5 3.7 53 24-81 178-232 (294)
150 1r18_A Protein-L-isoaspartate( 27.7 16 0.00055 23.8 0.5 15 32-46 182-196 (227)
151 2b0l_A GTP-sensing transcripti 27.6 36 0.0012 20.3 2.1 17 57-73 58-74 (102)
152 2oz6_A Virulence factor regula 27.6 35 0.0012 21.2 2.1 18 57-74 179-196 (207)
153 3i53_A O-methyltransferase; CO 27.5 74 0.0025 21.8 4.0 28 23-50 253-280 (332)
154 2b2c_A Spermidine synthase; be 27.1 81 0.0028 22.3 4.2 21 24-44 202-222 (314)
155 2gb4_A Thiopurine S-methyltran 27.1 31 0.001 23.5 1.9 24 23-46 170-193 (252)
156 1jsx_A Glucose-inhibited divis 26.9 20 0.00068 22.6 0.8 23 22-44 143-165 (207)
157 1xdz_A Methyltransferase GIDB; 26.8 24 0.00083 23.2 1.3 22 22-43 152-173 (240)
158 3dou_A Ribosomal RNA large sub 26.8 56 0.0019 21.0 3.1 24 23-46 118-141 (191)
159 1nkv_A Hypothetical protein YJ 26.8 21 0.00071 23.3 0.9 26 22-47 118-143 (256)
160 3iwz_A CAP-like, catabolite ac 26.7 36 0.0012 21.5 2.1 18 57-74 202-219 (230)
161 3kxu_A Ferritin; iron storage 26.5 1.4E+02 0.0049 19.7 5.4 39 11-49 48-86 (191)
162 1ucr_A Protein DSVD; dissimila 26.5 35 0.0012 20.4 1.8 18 57-74 37-54 (78)
163 3ryp_A Catabolite gene activat 26.4 38 0.0013 21.1 2.1 18 57-74 182-199 (210)
164 1i1n_A Protein-L-isoaspartate 26.4 22 0.00075 22.9 1.0 15 32-46 170-184 (226)
165 3lst_A CALO1 methyltransferase 26.1 79 0.0027 22.0 4.0 29 22-50 264-292 (348)
166 2qe6_A Uncharacterized protein 26.1 57 0.0019 22.3 3.2 26 23-48 175-200 (274)
167 3mq2_A 16S rRNA methyltransfer 26.0 17 0.00059 23.3 0.4 24 23-46 119-142 (218)
168 3tka_A Ribosomal RNA small sub 25.9 40 0.0014 25.2 2.4 25 20-44 250-274 (347)
169 2yxe_A Protein-L-isoaspartate 25.9 18 0.00062 23.0 0.5 15 32-46 165-179 (215)
170 1jg1_A PIMT;, protein-L-isoasp 25.6 20 0.0007 23.4 0.7 16 32-47 177-192 (235)
171 2v7f_A RPS19, RPS19E SSU ribos 25.5 57 0.0019 21.2 2.9 18 57-74 96-113 (150)
172 1g6q_1 HnRNP arginine N-methyl 25.5 21 0.00073 25.1 0.9 21 21-41 122-142 (328)
173 1rcd_A L ferritin; iron storag 25.3 1.4E+02 0.0047 19.1 5.4 41 8-48 45-85 (173)
174 1z6o_A Ferritin light chain; m 25.2 1.5E+02 0.005 20.0 5.1 41 9-49 70-110 (212)
175 2gpy_A O-methyltransferase; st 25.2 27 0.00093 22.6 1.3 23 22-44 138-160 (233)
176 1ft9_A Carbon monoxide oxidati 25.2 45 0.0015 21.2 2.4 18 57-74 178-195 (222)
177 2fca_A TRNA (guanine-N(7)-)-me 25.2 65 0.0022 20.8 3.2 38 25-71 134-171 (213)
178 3u5c_Z RP45, S31, YS23, 40S ri 25.0 27 0.00091 22.1 1.1 18 57-74 74-91 (108)
179 4hhu_A OR280; engineered prote 25.0 48 0.0016 21.8 2.4 25 38-69 2-26 (170)
180 2r3s_A Uncharacterized protein 25.0 61 0.0021 22.1 3.1 29 21-49 248-276 (335)
181 2pbf_A Protein-L-isoaspartate 24.8 21 0.00071 23.0 0.6 16 31-46 180-195 (227)
182 2plw_A Ribosomal RNA methyltra 24.6 62 0.0021 20.1 2.9 21 26-46 136-156 (201)
183 3la7_A Global nitrogen regulat 24.5 42 0.0014 21.9 2.1 18 57-74 208-225 (243)
184 2b78_A Hypothetical protein SM 24.5 55 0.0019 23.6 2.9 28 18-45 305-332 (385)
185 4ev0_A Transcription regulator 24.4 43 0.0015 20.9 2.1 18 57-74 178-195 (216)
186 3by6_A Predicted transcription 24.4 44 0.0015 20.5 2.1 40 31-74 26-67 (126)
187 3dv8_A Transcriptional regulat 24.4 43 0.0015 21.0 2.1 18 57-74 184-201 (220)
188 2ozv_A Hypothetical protein AT 24.3 31 0.0011 23.2 1.5 24 22-45 148-171 (260)
189 2ra5_A Putative transcriptiona 24.3 14 0.00048 25.3 -0.3 49 17-74 19-72 (247)
190 2zcw_A TTHA1359, transcription 24.2 44 0.0015 20.9 2.1 18 57-74 161-178 (202)
191 1vbf_A 231AA long hypothetical 24.2 23 0.00078 22.8 0.7 16 32-47 153-168 (231)
192 1zx0_A Guanidinoacetate N-meth 24.2 32 0.0011 22.4 1.5 52 22-73 148-204 (236)
193 1zyb_A Transcription regulator 24.1 48 0.0016 21.3 2.3 18 57-74 201-218 (232)
194 3b02_A Transcriptional regulat 24.0 41 0.0014 21.0 1.9 18 57-74 154-171 (195)
195 2gau_A Transcriptional regulat 23.9 44 0.0015 21.3 2.1 18 57-74 195-212 (232)
196 2bm8_A Cephalosporin hydroxyla 23.9 40 0.0014 22.4 2.0 23 23-45 165-188 (236)
197 2ip2_A Probable phenazine-spec 23.8 1.1E+02 0.0039 20.8 4.4 26 24-49 252-277 (334)
198 2bgc_A PRFA; bacterial infecti 23.8 44 0.0015 21.6 2.1 18 57-74 185-202 (238)
199 4dmg_A Putative uncharacterize 23.7 75 0.0026 23.3 3.6 28 17-44 299-326 (393)
200 3dp7_A SAM-dependent methyltra 23.6 91 0.0031 21.9 3.9 29 21-49 264-292 (363)
201 1krq_A Ferritin; H-chain like 23.5 1.5E+02 0.005 18.8 5.0 40 9-48 37-76 (167)
202 2key_A Putative phage integras 23.2 72 0.0025 17.8 2.8 25 57-81 80-108 (112)
203 3e97_A Transcriptional regulat 23.1 47 0.0016 21.1 2.1 18 57-74 190-207 (231)
204 3dkw_A DNR protein; CRP-FNR, H 22.9 44 0.0015 21.1 1.9 18 57-74 193-210 (227)
205 2fmy_A COOA, carbon monoxide o 22.7 48 0.0016 21.0 2.1 18 57-74 182-199 (220)
206 3dmg_A Probable ribosomal RNA 22.7 51 0.0017 24.0 2.5 24 21-44 317-340 (381)
207 3mcz_A O-methyltransferase; ad 22.7 65 0.0022 22.2 2.9 29 22-50 265-293 (352)
208 2fhp_A Methylase, putative; al 22.5 27 0.00093 21.4 0.8 18 31-48 141-158 (187)
209 3d0s_A Transcriptional regulat 22.4 49 0.0017 21.0 2.1 18 57-74 192-209 (227)
210 3opn_A Putative hemolysin; str 22.2 36 0.0012 22.9 1.5 20 25-44 118-137 (232)
211 2xzm_8 RPS25E,; ribosome, tran 22.2 33 0.0011 22.7 1.2 18 57-74 78-95 (143)
212 2xvc_A ESCRT-III, SSO0910; cel 21.9 63 0.0021 18.3 2.2 17 57-73 40-56 (59)
213 3fsi_A RT, reverse transcripta 21.9 62 0.0021 21.8 2.6 24 57-80 49-75 (255)
214 1mjf_A Spermidine synthase; sp 21.9 86 0.0029 21.4 3.4 52 25-81 174-227 (281)
215 1hw1_A FADR, fatty acid metabo 21.8 50 0.0017 21.7 2.1 18 57-74 46-63 (239)
216 4dsg_A UDP-galactopyranose mut 21.8 82 0.0028 23.2 3.5 43 31-73 338-381 (484)
217 1ws6_A Methyltransferase; stru 21.7 53 0.0018 19.6 2.1 18 31-48 134-151 (171)
218 3sq7_A Tyrosyl-DNA phosphodies 21.5 1.8E+02 0.0062 22.3 5.4 48 18-68 155-218 (470)
219 1bm9_A RTP, TER, replication t 21.0 1.1E+02 0.0039 19.3 3.6 20 10-29 94-113 (122)
220 4fzv_A Putative methyltransfer 21.0 1.3E+02 0.0043 22.0 4.3 38 26-66 266-303 (359)
221 1xaw_A Occludin; coiled-coil, 21.0 1.4E+02 0.0047 19.5 4.0 26 7-32 42-67 (140)
222 2frx_A Hypothetical protein YE 20.8 2E+02 0.0069 21.6 5.5 38 24-64 226-263 (479)
223 4e17_B Catenin alpha-1; four h 20.8 61 0.0021 17.0 1.9 13 57-69 22-34 (40)
224 4dnh_A Uncharacterized protein 20.8 76 0.0026 24.2 3.1 16 5-20 129-144 (396)
225 3edp_A LIN2111 protein; APC883 20.7 54 0.0018 22.1 2.1 49 17-74 12-65 (236)
226 1sqg_A SUN protein, FMU protei 20.6 1.5E+02 0.0051 21.5 4.7 23 23-45 353-375 (429)
227 1oyi_A Double-stranded RNA-bin 20.5 75 0.0026 18.8 2.5 24 57-80 45-69 (82)
228 3c3p_A Methyltransferase; NP_9 20.5 35 0.0012 21.7 1.1 23 22-44 138-160 (210)
229 2ek5_A Predicted transcription 20.3 51 0.0017 20.4 1.8 18 57-74 43-60 (129)
230 3g89_A Ribosomal RNA small sub 20.3 39 0.0013 22.8 1.3 23 22-44 162-184 (249)
231 3kcc_A Catabolite gene activat 20.2 57 0.0019 21.6 2.1 18 57-74 232-249 (260)
232 2wwb_B SEC61gamma, protein tra 20.2 69 0.0024 18.4 2.2 13 16-28 11-23 (68)
233 2hzt_A Putative HTH-type trans 20.1 55 0.0019 19.1 1.8 18 57-74 43-60 (107)
No 1
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=99.94 E-value=1.2e-27 Score=180.55 Aligned_cols=80 Identities=33% Similarity=0.457 Sum_probs=74.1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecCCCCCCCCc-----HHHHHHHHHHHHcCCccc---
Q 034814 3 KEPMSEFDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYNDSFHATSPG-----EPALLVIKDMISEGSLSL--- 74 (82)
Q Consensus 3 ~~~~s~~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~-----~~l~~al~dmv~eGli~~--- 74 (82)
.++++|++|.+||++||++||+.||++|++||+|||+||++++||++.++.+++ +.|.+||+|||.||+|++
T Consensus 168 ~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~ 247 (359)
T 1m6e_X 168 MANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKM 247 (359)
T ss_dssp SCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTT
T ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhh
Confidence 457889999999999999999999999999999999999999999998876542 899999999999999999
Q ss_pred -ccccCCCC
Q 034814 75 -SFNTYQKN 82 (82)
Q Consensus 75 -sFn~P~y~ 82 (82)
+||+|+|.
T Consensus 248 d~f~~P~y~ 256 (359)
T 1m6e_X 248 DKFNIPQYT 256 (359)
T ss_dssp GGGCCCCBC
T ss_pred hccCCCccC
Confidence 99999994
No 2
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.93 E-value=2e-26 Score=175.13 Aligned_cols=79 Identities=38% Similarity=0.579 Sum_probs=72.8
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecCCC--CCCCCcHHHHHHHHHHHHcCCccc----cc
Q 034814 3 KEPMSEFDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYNDSF--HATSPGEPALLVIKDMISEGSLSL----SF 76 (82)
Q Consensus 3 ~~~~s~~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~--~~~~~~~~l~~al~dmv~eGli~~----sF 76 (82)
+++++|++|.+||++||++||+.||++|++||+|||+||++++||++. ++.+. +++.++|+|||.||+|++ +|
T Consensus 184 i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~-~~l~~al~~lv~eGli~~ek~dsf 262 (384)
T 2efj_A 184 SSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNSM-DLLEMSINDLVIEGHLEEEKLDSF 262 (384)
T ss_dssp SCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHH-HHHHHHHHHHHHHTSSCHHHHHTC
T ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCCcccCcccH-HHHHHHHHHHHHhCCcchhhhccc
Confidence 467889999999999999999999999999999999999999999887 65544 599999999999999999 89
Q ss_pred ccCCCC
Q 034814 77 NTYQKN 82 (82)
Q Consensus 77 n~P~y~ 82 (82)
|+|+|.
T Consensus 263 ~~P~y~ 268 (384)
T 2efj_A 263 NVPIYA 268 (384)
T ss_dssp CCSBCC
T ss_pred CCcccC
Confidence 999993
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.91 E-value=5.9e-25 Score=166.26 Aligned_cols=79 Identities=30% Similarity=0.399 Sum_probs=71.8
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecCCCCCCCCc-------HHHHHHHHHHHHcCCccc-
Q 034814 3 KEPMSEFDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYNDSFHATSPG-------EPALLVIKDMISEGSLSL- 74 (82)
Q Consensus 3 ~~~~s~~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~-------~~l~~al~dmv~eGli~~- 74 (82)
+++++|+ |.+||++||++||..||++|++||+|||+||+++.||++.++.++. ++|.++|+||+.||+|++
T Consensus 185 ~~~~~~~-v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e 263 (374)
T 3b5i_A 185 IHGAGEK-TTTAYKRQFQADLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAE 263 (374)
T ss_dssp SSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHH
T ss_pred eCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchh
Confidence 3567788 9999999999999999999999999999999999999988777632 479999999999999999
Q ss_pred ---ccccCCCC
Q 034814 75 ---SFNTYQKN 82 (82)
Q Consensus 75 ---sFn~P~y~ 82 (82)
+||+|+|.
T Consensus 264 ~~d~f~~P~y~ 274 (374)
T 3b5i_A 264 KRDGFNIPVYA 274 (374)
T ss_dssp HHSSCCCCBCC
T ss_pred hcccCCccccC
Confidence 89999994
No 4
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=83.51 E-value=0.7 Score=32.34 Aligned_cols=49 Identities=20% Similarity=0.194 Sum_probs=34.3
Q ss_pred HHHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCCc
Q 034814 24 SAFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGSL 72 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGli 72 (82)
..+++.=.+=|+|||++++++-.+..+........+.+....|.+.|+-
T Consensus 162 ~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~ 210 (233)
T 4df3_A 162 AIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLE 210 (233)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCE
Confidence 3455544566899999999887665433223336788888999999983
No 5
>2v1n_A KIN17, protein KIN homolog; nuclear protein, winged helix motif; NMR {Homo sapiens}
Probab=78.95 E-value=1.9 Score=27.62 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=23.2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhhh
Q 034814 5 PMSEFDVHRAYLDQFKSDFSAFLKFRS 31 (82)
Q Consensus 5 ~~s~~~V~~AY~~Qf~~D~~~FL~~Ra 31 (82)
...|..+.+.|++||++||-.-|+-|-
T Consensus 9 ~en~~k~i~~fS~eF~~~Fl~lLr~~~ 35 (111)
T 2v1n_A 9 SENPQQFMDYFSEEFRNDFLELLRRRF 35 (111)
T ss_dssp CCCGGGCHHHHHHHHHHHHHHHHHHHT
T ss_pred HhCHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 345677899999999999999999884
No 6
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=71.32 E-value=3.7 Score=26.08 Aligned_cols=29 Identities=21% Similarity=0.246 Sum_probs=23.7
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
.|...+|+.=.+=|+|||++++......+
T Consensus 105 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 105 NDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 56777777777789999999999988654
No 7
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=69.66 E-value=3.8 Score=26.99 Aligned_cols=27 Identities=7% Similarity=0.130 Sum_probs=22.4
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
|+..+|+.=.+=|+|||++++..++..
T Consensus 118 ~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 118 RLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp GHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred HHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 667788777788999999999988754
No 8
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=69.31 E-value=4.1 Score=27.93 Aligned_cols=29 Identities=21% Similarity=0.251 Sum_probs=23.6
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
+++..+|+.=.+=|+|||++++.....+.
T Consensus 160 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 160 ERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp THHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred hHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 46677887777889999999999988654
No 9
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=67.69 E-value=2.6 Score=29.16 Aligned_cols=39 Identities=18% Similarity=0.146 Sum_probs=22.1
Q ss_pred hhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCC
Q 034814 33 ELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGS 71 (82)
Q Consensus 33 ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGl 71 (82)
=|+|||++++++-.++.+......+........|.+.|+
T Consensus 170 ~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf 208 (232)
T 3id6_C 170 FLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNF 208 (232)
T ss_dssp HEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTE
T ss_pred hCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCC
Confidence 589999999997665433222222444566667777775
No 10
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=65.25 E-value=4.7 Score=27.19 Aligned_cols=29 Identities=21% Similarity=0.358 Sum_probs=23.1
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
.|...+|+.=.+=|+|||++++..+...+
T Consensus 145 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 145 ERYDAFFSLAHRLLPADGVMLLHTITGLH 173 (287)
T ss_dssp TTHHHHHHHHHHHSCTTCEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEecCCC
Confidence 45667777777789999999999888654
No 11
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=64.66 E-value=3.3 Score=28.00 Aligned_cols=27 Identities=22% Similarity=0.261 Sum_probs=22.0
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
|...+|+.=.+=|+|||++++...+..
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 566777777788999999999987754
No 12
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=64.46 E-value=3.3 Score=26.39 Aligned_cols=28 Identities=14% Similarity=0.287 Sum_probs=22.8
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
|...+|+.=.+=|+|||+++++......
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 146 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPS 146 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSS
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCc
Confidence 5667777777889999999999987654
No 13
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=64.40 E-value=6.4 Score=24.85 Aligned_cols=29 Identities=24% Similarity=0.127 Sum_probs=23.3
Q ss_pred HHHHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 20 KSDFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
..|...+|+.=.+=|+|||+++++.++.+
T Consensus 135 ~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 135 VHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred hHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 45677888877788999999999987653
No 14
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=64.25 E-value=6.5 Score=25.14 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=22.9
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
.|+..+|+.=.+=|+|||++++.+.....
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 146 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEG 146 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSS
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCc
Confidence 46777887777889999999999866543
No 15
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=64.24 E-value=5.9 Score=25.98 Aligned_cols=29 Identities=14% Similarity=0.120 Sum_probs=24.1
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
.|...+|+.=.+=|+|||+++++.+....
T Consensus 136 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 136 ENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 57778888777889999999999887755
No 16
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=64.14 E-value=7.7 Score=24.54 Aligned_cols=29 Identities=24% Similarity=0.143 Sum_probs=22.6
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
.|...+|+.=.+=|+|||++++.......
T Consensus 108 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 108 SLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 45667777667779999999999887643
No 17
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=61.31 E-value=4.4 Score=25.94 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=21.1
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
|...+|+.=.+=|+|||+++++.+.+.
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 455677666677999999999988764
No 18
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=60.25 E-value=4.4 Score=26.66 Aligned_cols=27 Identities=26% Similarity=0.366 Sum_probs=22.5
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
.|...+|+.=.+-|+|||+++++.++.
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 109 PDHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp TTHHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred CCHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 467788888888999999999998653
No 19
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=60.16 E-value=7.4 Score=26.73 Aligned_cols=29 Identities=17% Similarity=0.256 Sum_probs=23.1
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
.|...+|+.=.+=|+|||++++..+...+
T Consensus 171 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 171 ENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp GGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 45667777767789999999999988654
No 20
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=59.39 E-value=6.9 Score=25.88 Aligned_cols=45 Identities=18% Similarity=0.124 Sum_probs=26.9
Q ss_pred HHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHc
Q 034814 25 AFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISE 69 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~e 69 (82)
.+|+.=.+=|+|||++++++..++.+......+++...+..|.+.
T Consensus 142 ~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (210)
T 1nt2_A 142 ILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVFKSVLKEMEGD 186 (210)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCEEEEEEecCCccccCCHHHHHHHHHHHHHhh
Confidence 344444556899999999976654332223235555666665554
No 21
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=58.62 E-value=8 Score=24.74 Aligned_cols=25 Identities=24% Similarity=0.162 Sum_probs=19.5
Q ss_pred HHHHHhhhhhhhcCceEEEEeeecC
Q 034814 24 SAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
..+|+.=.+-|+|||+++++.+++.
T Consensus 121 ~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 121 SRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred HHHHHHHHHHcCCCeEEEEEECCcc
Confidence 3566666678999999999987763
No 22
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=58.55 E-value=7.8 Score=23.85 Aligned_cols=27 Identities=15% Similarity=0.169 Sum_probs=21.7
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
.+...+|+.=.+-|+|||.+++.....
T Consensus 134 ~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 134 EVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred hHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 466677777778899999999998664
No 23
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=58.46 E-value=3.6 Score=27.18 Aligned_cols=26 Identities=15% Similarity=0.331 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhh
Q 034814 8 EFDVHRAYLDQFKSDFSAFLKFRSEE 33 (82)
Q Consensus 8 ~~~V~~AY~~Qf~~D~~~FL~~Ra~E 33 (82)
.+.+++.|.+.|.+||..|=....+.
T Consensus 191 ~~~~a~~~~~~F~~~W~~~~~~~~~~ 216 (220)
T 4gel_A 191 DDKLTATFQAEFQRMWRAFAKTEGSQ 216 (220)
T ss_dssp CHHHHHHHHHHHHHHHHHSEEC----
T ss_pred CHHHHHHHHHHHHHHHHhccCCChHh
Confidence 46788999999999999885544433
No 24
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=58.35 E-value=4.7 Score=25.98 Aligned_cols=27 Identities=33% Similarity=0.350 Sum_probs=20.4
Q ss_pred HHHHHHHhhh-hhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRS-EELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra-~ELv~GG~mvl~~~gr~ 48 (82)
|...+|+.=. +=|+|||+++++.+...
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 4456666656 77899999999987654
No 25
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=58.07 E-value=6.9 Score=26.70 Aligned_cols=28 Identities=25% Similarity=0.449 Sum_probs=23.1
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
.|...+|+.=.+=|+|||++++.+....
T Consensus 167 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 167 ADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 4677788877788999999999988764
No 26
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=57.67 E-value=6.6 Score=26.48 Aligned_cols=26 Identities=19% Similarity=0.229 Sum_probs=21.3
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeee
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
.++..+|+.=.+=|+|||++++....
T Consensus 152 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 152 SEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 45777888778889999999998764
No 27
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=57.25 E-value=8 Score=24.49 Aligned_cols=27 Identities=19% Similarity=0.260 Sum_probs=21.4
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
++..+|+.=.+-|+|||.++++..+++
T Consensus 124 ~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 124 RFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 356677766778999999999988764
No 28
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=56.50 E-value=19 Score=22.93 Aligned_cols=29 Identities=10% Similarity=-0.096 Sum_probs=22.1
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDSF 50 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~ 50 (82)
|...+|+.=.+-|+|||.++++.......
T Consensus 121 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 149 (219)
T 3dh0_A 121 EPLKFLEELKRVAKPFAYLAIIDWKKEER 149 (219)
T ss_dssp SHHHHHHHHHHHEEEEEEEEEEEECSSCC
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 44567776677899999999988776554
No 29
>1nvp_D Transcription initiation factor IIA gamma chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1 b.56.1.1
Probab=55.55 E-value=6.8 Score=24.74 Aligned_cols=18 Identities=6% Similarity=0.171 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
-.|.++|.||+.+|.|++
T Consensus 12 ~aL~dtLdEli~~~~Isp 29 (108)
T 1nvp_D 12 NSLQESLDELIQSQQITP 29 (108)
T ss_dssp HHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHcCCCCH
Confidence 578999999999999987
No 30
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=55.11 E-value=6 Score=26.33 Aligned_cols=28 Identities=18% Similarity=0.139 Sum_probs=22.4
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
|...+|+.=.+-|+|||+++++.+...+
T Consensus 144 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 171 (273)
T 3bus_A 144 DRGRALREMARVLRPGGTVAIADFVLLA 171 (273)
T ss_dssp CHHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred CHHHHHHHHHHHcCCCeEEEEEEeeccC
Confidence 4467777778889999999999887653
No 31
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=54.33 E-value=7.8 Score=23.81 Aligned_cols=29 Identities=21% Similarity=0.170 Sum_probs=21.9
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDSF 50 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~ 50 (82)
|...+|+.=.+-|+|||++++....+...
T Consensus 90 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 118 (170)
T 3i9f_A 90 DKQHVISEVKRILKDDGRVIIIDWRKENT 118 (170)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSCC
T ss_pred CHHHHHHHHHHhcCCCCEEEEEEcCcccc
Confidence 44566766667899999999998776543
No 32
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=53.71 E-value=8.8 Score=24.71 Aligned_cols=26 Identities=31% Similarity=0.479 Sum_probs=21.1
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeee
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
.|...+|+.=.+=|+|||++++.+..
T Consensus 119 ~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 119 DDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 46778888777889999999997664
No 33
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=53.53 E-value=11 Score=24.53 Aligned_cols=27 Identities=22% Similarity=0.367 Sum_probs=21.8
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
.|...+|+.=.+=|+|||+++++....
T Consensus 174 ~~~~~~l~~~~~~LkpgG~l~i~~~~~ 200 (254)
T 1xtp_A 174 ADFVKFFKHCQQALTPNGYIFFKENCS 200 (254)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 467788887778899999999988643
No 34
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=53.28 E-value=8.1 Score=25.81 Aligned_cols=28 Identities=18% Similarity=0.258 Sum_probs=22.5
Q ss_pred HHHHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 20 KSDFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
..|...+|+.=.+=|+|||+++++.+..
T Consensus 150 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 150 SESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 3567778877778899999999998764
No 35
>2jqt_A H-NS/STPA-binding protein 2; CNU, YDGT, replication origin associated, ORIC, protein binding; NMR {Escherichia coli}
Probab=53.05 E-value=7.1 Score=23.14 Aligned_cols=21 Identities=29% Similarity=0.623 Sum_probs=17.4
Q ss_pred HHHHHHHH---hhhhhhhcCceEE
Q 034814 21 SDFSAFLK---FRSEELKCGGRMI 41 (82)
Q Consensus 21 ~D~~~FL~---~Ra~ELv~GG~mv 41 (82)
.++..|.. +|-.||+.||+++
T Consensus 34 ~e~~~f~~AaDHRrAEl~~~gkLy 57 (71)
T 2jqt_A 34 QELINMYRAADHRRAELVSGGRLF 57 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCccc
Confidence 37778876 5999999999986
No 36
>3ic7_A Putative transcriptional regulator; helix-turn-helix, structural genomics, PSI-2, protein struct initiative; 2.82A {Bacteroides thetaiotaomicron}
Probab=53.01 E-value=10 Score=23.48 Aligned_cols=49 Identities=10% Similarity=0.056 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhhhhhhhcCceEEEEeeecCCCCCCCC----c-HHHHHHHHHHHHcCCccc
Q 034814 17 DQFKSDFSAFLKFRSEELKCGGRMILTLLYNDSFHATSP----G-EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 17 ~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~----~-~~l~~al~dmv~eGli~~ 74 (82)
+|...++..-+ .+.++.||-+| ++....+. . ..+..|+..|+.+|+|..
T Consensus 14 ~~i~~~l~~~I--~~g~~~~G~~l-------Ps~~~La~~~~vSr~tvr~Al~~L~~~G~i~~ 67 (126)
T 3ic7_A 14 LQIADRICDDI--LLGQYEEEGRI-------PSVREYASIVEVNANTVMRSYEYLQSQEVIYN 67 (126)
T ss_dssp THHHHHHHHHH--HTTSSCBTSEE-------CCTTTTTTCC-CCSGGGHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHH--HhCCCCCCCcC-------cCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEE
Confidence 34444444333 34678898887 33322221 1 789999999999999975
No 37
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=52.72 E-value=8.1 Score=25.65 Aligned_cols=26 Identities=12% Similarity=0.201 Sum_probs=21.0
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeee
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
.|...+|+.=.+-|+|||++++....
T Consensus 128 ~~~~~~l~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 128 AELDAALERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 57778888778889999999997543
No 38
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=52.18 E-value=6.9 Score=26.73 Aligned_cols=27 Identities=26% Similarity=0.396 Sum_probs=20.9
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
.|...+|+.=.+=|+|||+++++....
T Consensus 149 ~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 149 KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 356677777677899999999987654
No 39
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=52.12 E-value=8.4 Score=24.85 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=22.1
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
.|...+|+.=.+=|+|||++++.....+
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 118 EELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 5677788877788999999999865543
No 40
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=51.84 E-value=4.9 Score=25.57 Aligned_cols=28 Identities=25% Similarity=0.240 Sum_probs=21.8
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
|...+|+.=.+=|+|||++++..+....
T Consensus 130 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 130 DIIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp CCHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred hHHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 4556777777789999999999876543
No 41
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=51.69 E-value=13 Score=22.82 Aligned_cols=27 Identities=15% Similarity=0.108 Sum_probs=20.5
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
.+...+|+.=.+=|+|||++++.+...
T Consensus 124 ~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 124 DGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 455677777677899999999987543
No 42
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=51.55 E-value=12 Score=24.35 Aligned_cols=27 Identities=19% Similarity=-0.064 Sum_probs=20.8
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
|...+|+.=.+=|+|||++++.-++..
T Consensus 141 ~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 141 KRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp GHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 556677766778999999988877654
No 43
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=51.55 E-value=17 Score=22.79 Aligned_cols=29 Identities=14% Similarity=0.048 Sum_probs=20.9
Q ss_pred HHHHHHHHhhhh--hhhcCceEEEEeeecCC
Q 034814 21 SDFSAFLKFRSE--ELKCGGRMILTLLYNDS 49 (82)
Q Consensus 21 ~D~~~FL~~Ra~--ELv~GG~mvl~~~gr~~ 49 (82)
.|+..+|+.-.+ =|+|||++++....+..
T Consensus 128 ~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 128 ADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred hhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 456666665555 79999999998876543
No 44
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=51.05 E-value=11 Score=23.46 Aligned_cols=25 Identities=20% Similarity=0.409 Sum_probs=17.1
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
+...+|+.=.+=|+|||+++++...
T Consensus 113 ~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 113 TTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred hHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 3444555555679999999987753
No 45
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=50.76 E-value=9.2 Score=26.31 Aligned_cols=27 Identities=26% Similarity=0.240 Sum_probs=21.9
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
.|...+|+.=.+=|+|||.+++++++.
T Consensus 132 ~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 132 EQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 456677877778899999999998864
No 46
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=50.12 E-value=23 Score=23.15 Aligned_cols=48 Identities=17% Similarity=0.032 Sum_probs=26.1
Q ss_pred HHHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCC
Q 034814 24 SAFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGS 71 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGl 71 (82)
..+|+.=.+-|+|||++++++..+...............+.-|.+.|+
T Consensus 158 ~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~~l~~~Gf 205 (230)
T 1fbn_A 158 EILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGF 205 (230)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHHHHHHCCC
Confidence 345555556789999999985433221111111344455554555575
No 47
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=49.75 E-value=12 Score=24.79 Aligned_cols=19 Identities=21% Similarity=0.564 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 034814 8 EFDVHRAYLDQFKSDFSAF 26 (82)
Q Consensus 8 ~~~V~~AY~~Qf~~D~~~F 26 (82)
.+++++.|.+.|.+||..+
T Consensus 159 ~~~~~~~~~~~F~~~W~~~ 177 (196)
T 4ggj_A 159 DTEYVRLFLEEFERIWEEF 177 (196)
T ss_dssp CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhC
Confidence 4678899999999999765
No 48
>2rld_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.29.16.1
Probab=49.70 E-value=5.7 Score=24.82 Aligned_cols=22 Identities=23% Similarity=0.256 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 034814 8 EFDVHRAYLDQFKSDFSAFLKF 29 (82)
Q Consensus 8 ~~~V~~AY~~Qf~~D~~~FL~~ 29 (82)
+..+++++.++..+||.+||.-
T Consensus 50 ~aNIaEg~~r~s~~df~~~L~i 71 (121)
T 2rld_A 50 GANIREAEQAQSRADFINKLNI 71 (121)
T ss_dssp HHHHHHHTC--CHHHHHHHHHH
T ss_pred HHHHHHHHhcccHHHHHHHHHH
Confidence 5678999999999999999974
No 49
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=49.53 E-value=12 Score=24.41 Aligned_cols=26 Identities=27% Similarity=0.368 Sum_probs=20.7
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeee
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
.|...+|+.=.+=|+|||.+++.++.
T Consensus 122 ~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 122 EDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 46777777777789999999987654
No 50
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=49.23 E-value=13 Score=23.97 Aligned_cols=25 Identities=16% Similarity=0.344 Sum_probs=19.3
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEee
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
.|...+|+.=.+=|+|||++++.+.
T Consensus 114 ~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 114 ADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 4666777766677999999998654
No 51
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=49.02 E-value=12 Score=23.83 Aligned_cols=26 Identities=19% Similarity=0.248 Sum_probs=20.7
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeee
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
.|...+|+.=.+=|+|||++++..+.
T Consensus 119 ~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 119 LELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 45667777767789999999998765
No 52
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=48.84 E-value=12 Score=23.95 Aligned_cols=26 Identities=12% Similarity=0.201 Sum_probs=20.0
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
++..+|+.=.+=|+|||.++++....
T Consensus 132 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 132 QMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 45566777777899999999977654
No 53
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=48.56 E-value=11 Score=25.48 Aligned_cols=29 Identities=21% Similarity=0.057 Sum_probs=22.0
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDSF 50 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~ 50 (82)
|...+|+.=.+=|+|||+++++.+.....
T Consensus 165 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 193 (297)
T 2o57_A 165 DKLKVFQECARVLKPRGVMAITDPMKEDG 193 (297)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHcCCCeEEEEEEeccCCC
Confidence 34566776677899999999998876543
No 54
>1nh2_D Transcription initiation factor IIA small chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: a.32.1.1 b.56.1.1 PDB: 1ytf_D* 1rm1_B
Probab=48.14 E-value=10 Score=24.42 Aligned_cols=18 Identities=17% Similarity=0.394 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
-.|.++|.||+.+|.|++
T Consensus 16 ~aL~dtLdEli~~~~Isp 33 (121)
T 1nh2_D 16 NSLVDALDTLISDGRIEA 33 (121)
T ss_dssp HHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHcCCCCH
Confidence 578999999999999987
No 55
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=48.12 E-value=22 Score=22.55 Aligned_cols=24 Identities=17% Similarity=0.181 Sum_probs=18.2
Q ss_pred HHHHhhhhhhhcCceEEEEeeecC
Q 034814 25 AFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
.+|+.=.+-|+|||.++++.+...
T Consensus 126 ~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 126 VAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp HHHHHHHHHSCTTCEEEEEEECBS
T ss_pred HHHHHHHHhcCCCCEEEEEecccc
Confidence 366666678999999999875543
No 56
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=47.68 E-value=6.4 Score=30.37 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhhhhhhcCceEEEEee
Q 034814 20 KSDFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
..|...-|+...+.|+|||++|++=.
T Consensus 264 ~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 264 GPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp CHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred CchHHHHHHHHHHcCCCCcEEEEeec
Confidence 35666677777789999999998733
No 57
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=47.41 E-value=12 Score=24.81 Aligned_cols=28 Identities=21% Similarity=0.090 Sum_probs=22.1
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
|...+|+.=.+=|+|||+++++.+....
T Consensus 128 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 155 (267)
T 3kkz_A 128 GFERGLNEWRKYLKKGGYLAVSECSWFT 155 (267)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEEEEEESS
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEeeecC
Confidence 4566777777889999999999877543
No 58
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=46.75 E-value=8.3 Score=25.73 Aligned_cols=27 Identities=15% Similarity=-0.046 Sum_probs=21.9
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
.|...+|+.=.+=|+|||++++..+.+
T Consensus 129 ~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 129 ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 346777777778899999999998775
No 59
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=46.73 E-value=10 Score=24.54 Aligned_cols=28 Identities=18% Similarity=0.095 Sum_probs=20.8
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
|...+|+.=.+=|+|||+++++..+...
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 3445666666779999999999876543
No 60
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=46.38 E-value=12 Score=24.49 Aligned_cols=28 Identities=21% Similarity=0.088 Sum_probs=20.9
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
|...+|+.=.+=|+|||+++++.+....
T Consensus 128 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 128 GFERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp CHHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 3456676666789999999999876443
No 61
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=46.28 E-value=8.6 Score=26.52 Aligned_cols=27 Identities=7% Similarity=-0.064 Sum_probs=18.8
Q ss_pred HHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 23 FSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 23 ~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
...||+.=.+=|+|||++++...+...
T Consensus 114 ~~~~~~e~~rvLkpgG~l~~~~~~~~~ 140 (257)
T 4hg2_A 114 LDRFWAELRRVARPGAVFAAVTYGLTR 140 (257)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECCCB
T ss_pred HHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 344555445569999999998876543
No 62
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=46.27 E-value=19 Score=23.20 Aligned_cols=25 Identities=24% Similarity=0.131 Sum_probs=18.8
Q ss_pred HHHHHhhhhhhhcCceEEEEeeecC
Q 034814 24 SAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
..+|+.=.+=|+|||+++++....+
T Consensus 128 ~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 128 KELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred HHHHHHHHHhcCCCcEEEEEEecCC
Confidence 3466655677999999999887654
No 63
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=45.77 E-value=14 Score=24.87 Aligned_cols=27 Identities=26% Similarity=0.315 Sum_probs=21.1
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
.|+...|+.=++=|+|||+++++....
T Consensus 174 ~~~~~~l~~i~r~LKPGG~li~~~~~~ 200 (263)
T 2a14_A 174 DAYRAALCNLASLLKPGGHLVTTVTLR 200 (263)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 567777776667899999999987543
No 64
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=45.72 E-value=18 Score=22.43 Aligned_cols=25 Identities=20% Similarity=0.163 Sum_probs=18.9
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
|...+|+.=.+=|+|||++++.-+.
T Consensus 79 ~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 79 HSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp CCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHCCCCEEEEEEccc
Confidence 4566777667789999999996543
No 65
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=44.58 E-value=11 Score=22.20 Aligned_cols=25 Identities=16% Similarity=0.020 Sum_probs=20.7
Q ss_pred H-HHHHHHHHHHHcCCccc-ccccCCC
Q 034814 57 E-PALLVIKDMISEGSLSL-SFNTYQK 81 (82)
Q Consensus 57 ~-~l~~al~dmv~eGli~~-sFn~P~y 81 (82)
. .+.+.|.+|.++|+|.. ..+-|+|
T Consensus 40 ~~aVr~hL~~Le~eGlV~~~~~gRP~w 66 (79)
T 1xmk_A 40 ARDINAVLIDMERQGDVYRQGTTPPIW 66 (79)
T ss_dssp HHHHHHHHHHHHHTTSEEEECSSSCEE
T ss_pred HHHHHHHHHHHHHCCCEEecCCCCCCe
Confidence 5 78999999999999986 6666655
No 66
>3f8m_A GNTR-family protein transcriptional regulator; PHNF, HUTC, winged helix-TUR UTRA, DNA-binding, transcription regulation; 1.80A {Mycobacterium smegmatis}
Probab=44.21 E-value=6.1 Score=27.19 Aligned_cols=49 Identities=8% Similarity=0.270 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecCCCCCCC----Cc-HHHHHHHHHHHHcCCccc
Q 034814 15 YLDQFKSDFSAFLKFRSEELKCGGRMILTLLYNDSFHATS----PG-EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 15 Y~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~----~~-~~l~~al~dmv~eGli~~ 74 (82)
...|...++..-+. . +.||.+| ++....+ -. ..+.+||..|++||+|..
T Consensus 15 ~y~~i~~~l~~~I~--~--~~~g~~l-------Pse~~La~~~~vSr~tvr~Al~~L~~~G~i~~ 68 (248)
T 3f8m_A 15 KHQVVRAELDRMLD--G--MRIGDPF-------PAEREIAEQFEVARETVRQALRELLIDGRVER 68 (248)
T ss_dssp HHHHHHHHHHHHHH--H--CCTTCBC-------CCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHHh--C--CCCCCcC-------cCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEe
Confidence 45677777776664 2 7777765 3322111 11 789999999999999864
No 67
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=44.18 E-value=10 Score=24.95 Aligned_cols=26 Identities=23% Similarity=0.290 Sum_probs=20.4
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeee
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
.|...+|+.=.+=|+|||+++++...
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 122 ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 35667777777889999999998654
No 68
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=44.03 E-value=16 Score=23.56 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=26.6
Q ss_pred HHHHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCC
Q 034814 23 FSAFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGS 71 (82)
Q Consensus 23 ~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGl 71 (82)
...||+.=.+=|+|||++++.+..+. +........|.+.|+
T Consensus 158 ~~~~l~~~~~~LkpgG~l~~~~~~~~--------~~~~~~~~~l~~~g~ 198 (230)
T 3evz_A 158 SVKLLEEAFDHLNPGGKVALYLPDKE--------KLLNVIKERGIKLGY 198 (230)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEEESCH--------HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCeEEEEEecccH--------hHHHHHHHHHHHcCC
Confidence 35677666677999999999875432 234444555556665
No 69
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=43.91 E-value=13 Score=23.04 Aligned_cols=25 Identities=12% Similarity=0.137 Sum_probs=18.5
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
|...+|+.=.+=|+|||+++++...
T Consensus 114 ~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 114 TIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEee
Confidence 5566777667789999998776543
No 70
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=43.62 E-value=13 Score=24.09 Aligned_cols=27 Identities=30% Similarity=0.308 Sum_probs=20.0
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
|...+|+.=.+=|+|||.+++..+.+.
T Consensus 117 ~~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 117 DPERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 445666666677899999999987653
No 71
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=43.46 E-value=13 Score=24.23 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=20.7
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeee
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
.|...+|+.=.+=|+|||++++....
T Consensus 175 ~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 175 PAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 46777787777789999999998743
No 72
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=43.33 E-value=21 Score=22.80 Aligned_cols=24 Identities=17% Similarity=-0.035 Sum_probs=18.0
Q ss_pred HHHHHHHhhhhhhhcCceEEEEee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
|+..+|+.=.+=|+|||.++++..
T Consensus 119 ~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 119 RLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred HHHHHHHHHHHHcCCCEEEEEccC
Confidence 567788777788999996666543
No 73
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=43.32 E-value=9.6 Score=25.65 Aligned_cols=26 Identities=23% Similarity=0.226 Sum_probs=20.6
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
|...+|+.=.+=|+|||++++....+
T Consensus 151 ~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 151 DPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp CHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred CHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 44567777778899999999998754
No 74
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=43.27 E-value=22 Score=21.11 Aligned_cols=24 Identities=17% Similarity=0.342 Sum_probs=17.6
Q ss_pred HHHHHhhhhhhhcCceEEEEeeec
Q 034814 24 SAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
..+|+.=.+=|+|||.++++....
T Consensus 116 ~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 116 ELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEESS
T ss_pred HHHHHHHHHHcCCCcEEEEEEecC
Confidence 555655556789999999877644
No 75
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=43.22 E-value=40 Score=23.44 Aligned_cols=52 Identities=17% Similarity=-0.123 Sum_probs=31.0
Q ss_pred HHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCCccc---ccccCCC
Q 034814 25 AFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGSLSL---SFNTYQK 81 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGli~~---sFn~P~y 81 (82)
.|++.=.+=|+|||.+++.... +......+......|.+.|.-.- ..++|.|
T Consensus 191 ~~l~~~~~~LkpgG~lv~~~~~-----~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~y 245 (304)
T 3bwc_A 191 AFYKDVLRILKPDGICCNQGES-----IWLDLELIEKMSRFIRETGFASVQYALMHVPTY 245 (304)
T ss_dssp HHHHHHHHHEEEEEEEEEEECC-----TTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTS
T ss_pred HHHHHHHHhcCCCcEEEEecCC-----cccchHHHHHHHHHHHhCCCCcEEEEEeecccc
Confidence 4555445668999999987422 11122455666666667775222 5567766
No 76
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=42.21 E-value=19 Score=22.43 Aligned_cols=24 Identities=8% Similarity=0.043 Sum_probs=17.5
Q ss_pred HHHHHHhhhhhhhcCceEEEEeee
Q 034814 23 FSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 23 ~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
+..|++.=.+=|+|||+++++..+
T Consensus 143 ~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 143 YRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHHHTCCGGGBCSSSEEEEEECT
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEC
Confidence 377888777889999995444433
No 77
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=42.14 E-value=34 Score=22.03 Aligned_cols=40 Identities=18% Similarity=0.167 Sum_probs=23.2
Q ss_pred HHHhhhhhhhcCceEEEEeeecCCCCCCCCc-HHHHHHHHHH
Q 034814 26 FLKFRSEELKCGGRMILTLLYNDSFHATSPG-EPALLVIKDM 66 (82)
Q Consensus 26 FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~-~~l~~al~dm 66 (82)
+|+.=.+=|+|||.+++++... +.+..... ......+.++
T Consensus 160 ~l~~~~~~LkpgG~l~~~~~~~-~~~~~~~~~~~~~~~l~~l 200 (227)
T 1g8a_A 160 LIDNAEVYLKRGGYGMIAVKSR-SIDVTKEPEQVFREVEREL 200 (227)
T ss_dssp HHHHHHHHEEEEEEEEEEEEGG-GTCTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEEEecC-CCCCCCChhhhhHHHHHHH
Confidence 3444456789999999994333 22211111 4555666777
No 78
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=42.13 E-value=15 Score=26.19 Aligned_cols=25 Identities=28% Similarity=0.495 Sum_probs=20.7
Q ss_pred HHHHHHHHHhhhhhhhcCceEEEEe
Q 034814 20 KSDFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
-..+..+|..=..-|+|||++++..
T Consensus 221 l~~l~~~l~~~~~~l~~ggr~~vis 245 (301)
T 1m6y_A 221 LENLKEFLKKAEDLLNPGGRIVVIS 245 (301)
T ss_dssp HHHHHHHHHHGGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEEe
Confidence 3678899998888899999996554
No 79
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=41.97 E-value=13 Score=25.12 Aligned_cols=26 Identities=23% Similarity=0.324 Sum_probs=21.4
Q ss_pred HHHHHHHHHhhhhhhhcCceEEEEee
Q 034814 20 KSDFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
..|+..+|+.=.+=|+|||+++++..
T Consensus 191 ~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 191 LASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 45788888888888999999999753
No 80
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=41.78 E-value=18 Score=22.97 Aligned_cols=41 Identities=12% Similarity=0.174 Sum_probs=27.0
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGS 71 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGl 71 (82)
|...+|+.=.+=|+|||++++..... +.......-|.+.|.
T Consensus 120 ~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~~l~~~g~ 160 (204)
T 3e05_A 120 MLEEIIDAVDRRLKSEGVIVLNAVTL---------DTLTKAVEFLEDHGY 160 (204)
T ss_dssp CHHHHHHHHHHHCCTTCEEEEEECBH---------HHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeccc---------ccHHHHHHHHHHCCC
Confidence 45566666667799999999987554 234444555556664
No 81
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=41.46 E-value=22 Score=24.37 Aligned_cols=26 Identities=23% Similarity=0.369 Sum_probs=18.8
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
|...+|+.=.+=|+|||+++++-..+
T Consensus 156 ~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 156 ERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred hHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 44556666667799999999875544
No 82
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=41.43 E-value=13 Score=25.52 Aligned_cols=28 Identities=21% Similarity=0.201 Sum_probs=22.2
Q ss_pred HHHHHHhhhhhhhcCceEEEEeeecCCC
Q 034814 23 FSAFLKFRSEELKCGGRMILTLLYNDSF 50 (82)
Q Consensus 23 ~~~FL~~Ra~ELv~GG~mvl~~~gr~~~ 50 (82)
...+|+.=.+=|+|||+++++.....+.
T Consensus 200 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 227 (312)
T 3vc1_A 200 LHDLFSEHSRFLKVGGRYVTITGCWNPR 227 (312)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEECTT
T ss_pred HHHHHHHHHHHcCCCcEEEEEEcccccc
Confidence 5667777777899999999998776553
No 83
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=40.86 E-value=12 Score=26.23 Aligned_cols=26 Identities=19% Similarity=0.408 Sum_probs=21.0
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
|...+|+.=++=|+|||.++++.+.+
T Consensus 147 ~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 147 HYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp THHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 34677877788899999999998854
No 84
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=40.77 E-value=13 Score=25.34 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=21.4
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
|...||+.=.+=|+|||.+++...+.+
T Consensus 127 ~~~~~l~~~~~~LkpgG~l~i~~~~~~ 153 (299)
T 3g5t_A 127 DFEKFQRSAYANLRKDGTIAIWGYADP 153 (299)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 667788777788999999999776643
No 85
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=40.71 E-value=24 Score=22.98 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=20.6
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
++..+|+.=.+=|+|||+++++......
T Consensus 163 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 190 (241)
T 2ex4_A 163 HLAEFLRRCKGSLRPNGIIVIKDNMAQE 190 (241)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEEBSS
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEccCCC
Confidence 3456676666779999999998776543
No 86
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=40.39 E-value=21 Score=23.95 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=20.2
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
++..+|+.=.+-|+|||.++++......
T Consensus 201 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 228 (286)
T 3m70_A 201 RVPSIIKNMKEHTNVGGYNLIVAAMSTD 228 (286)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEBCCS
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 4556777767789999998877655433
No 87
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=40.31 E-value=13 Score=24.02 Aligned_cols=25 Identities=16% Similarity=0.348 Sum_probs=19.1
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
|...+|+.=.+=|+|||++++....
T Consensus 122 ~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 122 DVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 4556676666779999999998753
No 88
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=39.90 E-value=14 Score=23.37 Aligned_cols=26 Identities=15% Similarity=0.089 Sum_probs=19.9
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
|...+|+.=.+-|+|||.++++.+..
T Consensus 108 ~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 108 DPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp CHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 34567776677899999999988653
No 89
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=39.89 E-value=17 Score=24.00 Aligned_cols=27 Identities=22% Similarity=0.253 Sum_probs=20.1
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
|...+|+.=.+=|+|||+++++....+
T Consensus 118 d~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (260)
T 1vl5_A 118 NPASFVSEAYRVLKKGGQLLLVDNSAP 144 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEEBC
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEcCCC
Confidence 455667666677999999999866543
No 90
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=39.80 E-value=16 Score=23.64 Aligned_cols=27 Identities=26% Similarity=0.112 Sum_probs=20.4
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
|...+|+.=.+=|+|||++++......
T Consensus 149 ~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 149 MRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp GHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 556667666678999999998877654
No 91
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=39.39 E-value=12 Score=23.57 Aligned_cols=24 Identities=21% Similarity=0.249 Sum_probs=18.8
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEe
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
.|...+|+.=.+=|+|||++++..
T Consensus 125 ~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 125 EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 355667777778899999999875
No 92
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=38.80 E-value=17 Score=23.81 Aligned_cols=27 Identities=26% Similarity=0.318 Sum_probs=20.5
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
|...+|+.=.+=|+|||+++++....+
T Consensus 102 ~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 102 DVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 556677776778999999999866543
No 93
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=38.75 E-value=15 Score=24.44 Aligned_cols=25 Identities=20% Similarity=0.191 Sum_probs=19.6
Q ss_pred HHHHHHHHHhhhhhhhcCceEEEEe
Q 034814 20 KSDFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
..|...|++.=.+=|+|||++++..
T Consensus 146 ~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 146 THQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp THHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hcchhhhhhhhhheeCCCCEEEEEe
Confidence 3577788887778899999987643
No 94
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=38.69 E-value=13 Score=24.20 Aligned_cols=25 Identities=24% Similarity=0.218 Sum_probs=19.5
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
|...+|+.=.+=|+|||++++++..
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (263)
T 2yqz_A 119 DWPKVLAEAIRVLKPGGALLEGWDQ 143 (263)
T ss_dssp THHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHCCCCcEEEEEecC
Confidence 5667777777789999999998443
No 95
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=38.10 E-value=50 Score=22.69 Aligned_cols=53 Identities=9% Similarity=-0.184 Sum_probs=29.4
Q ss_pred HHHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCCccc--ccccCCC
Q 034814 24 SAFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGSLSL--SFNTYQK 81 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGli~~--sFn~P~y 81 (82)
..|++.=.+=|+|||.+++.... +....+.+...+..|.+.--..+ ..++|.|
T Consensus 172 ~~~l~~~~~~L~pgG~lv~~~~~-----~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y 226 (283)
T 2i7c_A 172 QNFYEKIYNALKPNGYCVAQCES-----LWIHVGTIKNMIGYAKKLFKKVEYANISIPTY 226 (283)
T ss_dssp HHHHHHHHHHEEEEEEEEEECCC-----TTTCHHHHHHHHHHHHTTCSEEEEEEEECTTS
T ss_pred HHHHHHHHHhcCCCcEEEEECCC-----cccCHHHHHHHHHHHHHHCCceEEEEEEcCCc
Confidence 34555545668999999987422 12222455666666554422112 5667766
No 96
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=37.98 E-value=29 Score=22.37 Aligned_cols=25 Identities=8% Similarity=-0.028 Sum_probs=16.5
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
|...+++.=++=|+|||++++.+..
T Consensus 118 ~~~~~l~~~~r~LkpgG~~~l~~~~ 142 (203)
T 1pjz_A 118 MRERYVQHLEALMPQACSGLLITLE 142 (203)
T ss_dssp HHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 4455666556678999995555543
No 97
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=37.94 E-value=27 Score=23.81 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=19.7
Q ss_pred HHHHhhhhhhhcCceEEEEeeecCCC
Q 034814 25 AFLKFRSEELKCGGRMILTLLYNDSF 50 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~~gr~~~ 50 (82)
.||+.=.+=|+|||++++....++..
T Consensus 208 ~~l~~~~~~LkpgG~l~i~~~~~~~~ 233 (305)
T 3ocj_A 208 ELYRRFWQALKPGGALVTSFLTPPPA 233 (305)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHhcCCCeEEEEEecCCCCc
Confidence 35555566799999999999887543
No 98
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=37.65 E-value=25 Score=22.41 Aligned_cols=23 Identities=22% Similarity=0.066 Sum_probs=17.0
Q ss_pred HHHHHHHhhhhhhhcCceEEEEe
Q 034814 22 DFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
++..+|+.=.+-|+|||.++.+.
T Consensus 119 ~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 119 RLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp HHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HHHHHHHHHHHhhCCCEEEEEcc
Confidence 56678887778899999555444
No 99
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=37.12 E-value=13 Score=24.35 Aligned_cols=47 Identities=17% Similarity=0.101 Sum_probs=25.1
Q ss_pred HHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCC
Q 034814 25 AFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGS 71 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGl 71 (82)
.+++.=.+-|+|||++++.+..............+...+.-|.+.|+
T Consensus 163 ~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 209 (233)
T 2ipx_A 163 IVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENM 209 (233)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTE
T ss_pred HHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCC
Confidence 34444456789999999987664222111111344444444444464
No 100
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=36.98 E-value=21 Score=24.45 Aligned_cols=27 Identities=15% Similarity=0.212 Sum_probs=21.4
Q ss_pred HHHHHHHHHHhhhhhhhcCceEEEEee
Q 034814 19 FKSDFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 19 f~~D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
-..+...+|+.=.+=|+|||++++...
T Consensus 195 ~~~~~~~~l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 195 GDEGLKRMFRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 345778888877888999999999654
No 101
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=36.34 E-value=35 Score=24.32 Aligned_cols=29 Identities=14% Similarity=0.124 Sum_probs=22.3
Q ss_pred HHHHHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 19 FKSDFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 19 f~~D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
..+|+..+|+.=.+-|+|||.+++++...
T Consensus 247 ~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 247 LFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 35677788877778899999988877553
No 102
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=36.17 E-value=15 Score=22.46 Aligned_cols=41 Identities=24% Similarity=0.421 Sum_probs=26.5
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGS 71 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGl 71 (82)
++..+|+.=.+-|+|||.+++..... +.......-+.+.|.
T Consensus 112 ~~~~~l~~~~~~l~~gG~l~~~~~~~---------~~~~~~~~~l~~~g~ 152 (192)
T 1l3i_A 112 ELQEILRIIKDKLKPGGRIIVTAILL---------ETKFEAMECLRDLGF 152 (192)
T ss_dssp CHHHHHHHHHHTEEEEEEEEEEECBH---------HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCCCcEEEEEecCc---------chHHHHHHHHHHCCC
Confidence 34667766677799999999987543 233444444555665
No 103
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=36.11 E-value=37 Score=24.42 Aligned_cols=51 Identities=14% Similarity=-0.111 Sum_probs=31.8
Q ss_pred HHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCCccc--ccccCCC
Q 034814 26 FLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGSLSL--SFNTYQK 81 (82)
Q Consensus 26 FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGli~~--sFn~P~y 81 (82)
|++.=.+=|+|||.|+...-. +....+.+...++.|.+-.-.-. ..++|.|
T Consensus 180 Fy~~~~~~L~p~Gv~v~q~~s-----p~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty 232 (294)
T 3o4f_A 180 FYEGCKRCLNPGGIFVAQNGV-----CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 232 (294)
T ss_dssp HHHHHHHTEEEEEEEEEEEEE-----SSSCCHHHHHHHHHHHHHCSEEEEEEECCTTS
T ss_pred HHHHHHHHhCCCCEEEEecCC-----cccChHHHHHHHHHHHhhCCceeeeeeeeccC
Confidence 333334568899999876422 22223667777777776654433 7778877
No 104
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=35.99 E-value=35 Score=24.48 Aligned_cols=30 Identities=13% Similarity=0.037 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhhhhhhhcCceEEEEeee
Q 034814 17 DQFKSDFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 17 ~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
....+++..+++.=.+-|+|||.++++...
T Consensus 298 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 298 ERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 345678888998888999999999888743
No 105
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=35.85 E-value=25 Score=21.90 Aligned_cols=22 Identities=18% Similarity=0.324 Sum_probs=16.5
Q ss_pred HHHHHhhhhhhhcCceEEEEee
Q 034814 24 SAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
..+|+.=.+=|+|||++++...
T Consensus 125 ~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 125 LTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEEec
Confidence 4556555667899999998864
No 106
>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A
Probab=35.82 E-value=67 Score=20.76 Aligned_cols=41 Identities=12% Similarity=-0.104 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 9 FDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 9 ~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
+-+.+-|.+|+.+-+.+=.+.-..-+..||+.++.-+..+.
T Consensus 36 ~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~ 76 (168)
T 3e6s_A 36 EGMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPV 76 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCCCC
Confidence 34556666666666655555444556789998877766664
No 107
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=35.73 E-value=38 Score=23.00 Aligned_cols=41 Identities=10% Similarity=0.130 Sum_probs=25.2
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHH
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIK 64 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~ 64 (82)
.+...+|+.=.+=|+|||++|++.... .+...++.+...|.
T Consensus 188 ~~~~~~l~~~~~~LkpgG~lv~stcs~---~~~ene~~v~~~l~ 228 (274)
T 3ajd_A 188 LRQKELIDIGIDLLKKDGELVYSTCSM---EVEENEEVIKYILQ 228 (274)
T ss_dssp TCHHHHHHHHHHHEEEEEEEEEEESCC---CTTSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEECCC---ChHHhHHHHHHHHH
Confidence 344667776667799999999887433 22222345555554
No 108
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=35.40 E-value=24 Score=26.64 Aligned_cols=23 Identities=17% Similarity=0.195 Sum_probs=19.5
Q ss_pred HHHHHHHHhhhhhhhcCceEEEE
Q 034814 21 SDFSAFLKFRSEELKCGGRMILT 43 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~ 43 (82)
.|+...|+.-.+-|+|||++|+.
T Consensus 336 ~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 336 EDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccHHHHHHHHHHhCCCCeEEEEe
Confidence 57777788778899999999987
No 109
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=35.01 E-value=28 Score=21.78 Aligned_cols=25 Identities=24% Similarity=0.268 Sum_probs=17.9
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
|...+|+.=.+=|+|||+++++...
T Consensus 117 ~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 117 TTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 3444666666779999999987643
No 110
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=34.93 E-value=45 Score=18.50 Aligned_cols=17 Identities=0% Similarity=0.012 Sum_probs=12.9
Q ss_pred CCChHHHHHHHHHHHHH
Q 034814 5 PMSEFDVHRAYLDQFKS 21 (82)
Q Consensus 5 ~~s~~~V~~AY~~Qf~~ 21 (82)
..+..++.+||.+.+.+
T Consensus 26 ~a~~~eIk~ayr~l~~~ 42 (71)
T 2guz_A 26 TLTKKKLKEVHRKIMLA 42 (71)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 46788999999886543
No 111
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=34.86 E-value=13 Score=24.76 Aligned_cols=18 Identities=22% Similarity=0.172 Sum_probs=14.3
Q ss_pred hhhhhcCceEEEEeeecC
Q 034814 31 SEELKCGGRMILTLLYND 48 (82)
Q Consensus 31 a~ELv~GG~mvl~~~gr~ 48 (82)
.+=|+|||+++++.++..
T Consensus 165 ~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 165 ARVVKPGGWVITATPGPR 182 (269)
T ss_dssp HHHEEEEEEEEEEEECTT
T ss_pred HHhcCCCcEEEEEEcCHH
Confidence 345889999999988754
No 112
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=34.20 E-value=17 Score=25.83 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=19.0
Q ss_pred HHHHHHHHHhhhhhhhcCceEE
Q 034814 20 KSDFSAFLKFRSEELKCGGRMI 41 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mv 41 (82)
..++..+|+.+.+=|+|||+++
T Consensus 147 ~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 147 ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TCHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHHHHhhcCCCcEEE
Confidence 3467789999999999999998
No 113
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=34.16 E-value=26 Score=23.40 Aligned_cols=25 Identities=16% Similarity=0.258 Sum_probs=20.5
Q ss_pred HHHHHHHHHhhhhhhhcCceEEEEe
Q 034814 20 KSDFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
..++..|++.=.+=|+|||+++++.
T Consensus 152 ~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 152 MCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp -HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHccCCcEEEEEE
Confidence 3677888888888899999999965
No 114
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=34.11 E-value=35 Score=20.89 Aligned_cols=18 Identities=6% Similarity=-0.245 Sum_probs=14.4
Q ss_pred hhhhhcCceEEEEeeecC
Q 034814 31 SEELKCGGRMILTLLYND 48 (82)
Q Consensus 31 a~ELv~GG~mvl~~~gr~ 48 (82)
.+=|+|||.+++......
T Consensus 125 ~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 125 KNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp TTCEEEEEEEEEEEETTC
T ss_pred CCCcCCCcEEEEEECCcc
Confidence 466899999999887654
No 115
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=33.71 E-value=22 Score=25.46 Aligned_cols=28 Identities=25% Similarity=0.369 Sum_probs=21.9
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
|...+|+.=.+=|+|||++++..+....
T Consensus 181 d~~~~l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 181 NKLALFKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEecccc
Confidence 5567777777789999999998777643
No 116
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=33.11 E-value=20 Score=25.63 Aligned_cols=25 Identities=16% Similarity=0.105 Sum_probs=21.7
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
|...||+.=.+=|+|||++++..+.
T Consensus 186 d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 186 YVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp THHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 6788888888889999999998765
No 117
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=32.87 E-value=70 Score=22.28 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=24.8
Q ss_pred HHHHHHHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHH
Q 034814 20 KSDFSAFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIK 64 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~ 64 (82)
.+....+|+.=.+=|+|||++|++.... .+....+.+...+.
T Consensus 222 ~~~q~~~L~~~~~~LkpGG~lv~stcs~---~~~Ene~~v~~~l~ 263 (315)
T 1ixk_A 222 QGLQMRLLEKGLEVLKPGGILVYSTCSL---EPEENEFVIQWALD 263 (315)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEESCC---CGGGTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeCCC---ChHHhHHHHHHHHh
Confidence 3344567776666789999999876332 12222245555554
No 118
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=32.73 E-value=17 Score=23.15 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=19.2
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
|...+|+.=.+=|+|||+++++....
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 45566666667789999999986553
No 119
>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A
Probab=32.40 E-value=1e+02 Score=19.95 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 9 FDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 9 ~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
+-..+-|.+|+.+-+.+=.+.-..-+..||+..+.-+..++
T Consensus 46 ~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~ 86 (176)
T 3ka8_A 46 HNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKPE 86 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCcccCCC
Confidence 44555566666655554444444446779998887766653
No 120
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=31.67 E-value=24 Score=22.31 Aligned_cols=27 Identities=11% Similarity=0.071 Sum_probs=20.5
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
++..+|+.=.+-|+|||++++......
T Consensus 137 ~~~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 137 ILLDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp HHHHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred HHHHHHHHHHHhcCCCCEEEEEecCcc
Confidence 356677766778999999999766653
No 121
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=31.67 E-value=32 Score=20.88 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=16.3
Q ss_pred HHHhhhhhhhcCceEEEEeeec
Q 034814 26 FLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 26 FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
+++.=.+-|+|||++++.....
T Consensus 109 ~l~~~~~~L~~gG~l~~~~~~~ 130 (178)
T 3hm2_A 109 VFAAAWKRLPVGGRLVANAVTV 130 (178)
T ss_dssp HHHHHHHTCCTTCEEEEEECSH
T ss_pred HHHHHHHhcCCCCEEEEEeecc
Confidence 5555556789999999887654
No 122
>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1
Probab=31.62 E-value=99 Score=20.22 Aligned_cols=41 Identities=7% Similarity=-0.028 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 9 FDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 9 ~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
+.+.+-|.+|+.+-+.+-.+.--.=+.-||+..+.-+..+.
T Consensus 46 ~g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~i~~p~ 86 (184)
T 3qz3_A 46 DGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAAPR 86 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCCcc
Confidence 34566667777666665555555556789998877666654
No 123
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=31.28 E-value=55 Score=22.75 Aligned_cols=24 Identities=4% Similarity=-0.162 Sum_probs=16.3
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEee
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
.|...+|+.=++=| |||++++++.
T Consensus 126 ~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 126 EEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp HHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred HHHHHHHHHHHHhC-cCcEEEEEec
Confidence 45555555444556 9999999874
No 124
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=31.19 E-value=30 Score=22.40 Aligned_cols=36 Identities=19% Similarity=0.136 Sum_probs=23.1
Q ss_pred HHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcC
Q 034814 26 FLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEG 70 (82)
Q Consensus 26 FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eG 70 (82)
+++.=.+-|+|||++++..... +.+...+.-+.+.|
T Consensus 136 ~l~~~~~~LkpgG~lv~~~~~~---------~~~~~~~~~l~~~g 171 (204)
T 3njr_A 136 LYDRLWEWLAPGTRIVANAVTL---------ESETLLTQLHARHG 171 (204)
T ss_dssp HHHHHHHHSCTTCEEEEEECSH---------HHHHHHHHHHHHHC
T ss_pred HHHHHHHhcCCCcEEEEEecCc---------ccHHHHHHHHHhCC
Confidence 4555456689999999987643 34445555555555
No 125
>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A
Probab=31.15 E-value=98 Score=20.44 Aligned_cols=40 Identities=8% Similarity=-0.017 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 9 FDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 9 ~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
+.+.+-|.+|+.+-+..--+.-..-+.-||+.++.-+..+
T Consensus 42 ~g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p 81 (189)
T 3uno_A 42 PQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTV 81 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCC
Confidence 4456666677766665555555555678999877666655
No 126
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A
Probab=31.05 E-value=1e+02 Score=19.81 Aligned_cols=40 Identities=15% Similarity=0.085 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 9 FDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 9 ~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
+.+.+-|.+|+.+-+.+=.+.--.=+.-||+..+.-...+
T Consensus 39 ~g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p 78 (173)
T 1s3q_A 39 KGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEP 78 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC
Confidence 4567777788877777766666666788999888776655
No 127
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=30.90 E-value=80 Score=21.84 Aligned_cols=52 Identities=10% Similarity=-0.149 Sum_probs=29.0
Q ss_pred HHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCCccc--ccccCCC
Q 034814 25 AFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGSLSL--SFNTYQK 81 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGli~~--sFn~P~y 81 (82)
.|++.=.+=|+|||.+++... .+....+.+...+..|.+..-.-. ...+|.|
T Consensus 186 ~~l~~~~~~LkpgG~lv~~~~-----~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~ 239 (296)
T 1inl_A 186 EFYQACYDALKEDGVFSAETE-----DPFYDIGWFKLAYRRISKVFPITRVYLGFMTTY 239 (296)
T ss_dssp HHHHHHHHHEEEEEEEEEECC-----CTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTS
T ss_pred HHHHHHHHhcCCCcEEEEEcc-----CcccCHHHHHHHHHHHHHHCCceEEEEeecCcc
Confidence 444444466899999998641 121222456666666666533222 4456665
No 128
>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A {Coxiella burnetii}
Probab=30.51 E-value=30 Score=20.72 Aligned_cols=18 Identities=0% Similarity=0.071 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
..+..|+..|+.+|+|..
T Consensus 48 ~tvr~al~~L~~~Gli~~ 65 (113)
T 3tqn_A 48 LTVSKAYQSLLDDNVIEK 65 (113)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 689999999999999975
No 129
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=30.43 E-value=15 Score=26.11 Aligned_cols=21 Identities=24% Similarity=0.251 Sum_probs=18.4
Q ss_pred HHHHHHHHhhhhhhhcCceEE
Q 034814 21 SDFSAFLKFRSEELKCGGRMI 41 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mv 41 (82)
.+...+|+.+.+=|+|||+++
T Consensus 150 ~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 150 SMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp CCHHHHHHHHHHHEEEEEEEE
T ss_pred hhHHHHHHHHHHhCCCCCEEc
Confidence 466788999999999999987
No 130
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=30.43 E-value=60 Score=22.76 Aligned_cols=27 Identities=30% Similarity=0.290 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhhhhhhhcCceEEEEee
Q 034814 19 FKSDFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 19 f~~D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
...+...|++.=.+-|+|||++++...
T Consensus 292 ~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 292 LFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp HHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 344456677666677889999999864
No 131
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=30.43 E-value=30 Score=21.30 Aligned_cols=49 Identities=8% Similarity=0.083 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhhhhhhhcCceEEEEeeecCCCCCCC----Cc-HHHHHHHHHHHHcCCccc
Q 034814 17 DQFKSDFSAFLKFRSEELKCGGRMILTLLYNDSFHATS----PG-EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 17 ~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~----~~-~~l~~al~dmv~eGli~~ 74 (82)
+|-...+..-+ .+.++.||-+| ++....+ -. ..+..|+..|+.+|+|..
T Consensus 17 ~QI~~~i~~~I--~~G~l~pG~~L-------Pser~La~~~gVSr~tVReAl~~L~~eGlv~~ 70 (134)
T 4ham_A 17 EQIVQKIKEQV--VKGVLQEGEKI-------LSIREFASRIGVNPNTVSKAYQELERQEVIIT 70 (134)
T ss_dssp HHHHHHHHHHH--HHTSSCTTCEE-------CCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHH--HcCCCCCCCCC-------ccHHHHHHHHCCCHHHHHHHHHHHHHCCcEEE
Confidence 34444443333 45688888887 2221111 11 789999999999999975
No 132
>3neu_A LIN1836 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; 1.58A {Listeria innocua}
Probab=30.33 E-value=30 Score=21.16 Aligned_cols=18 Identities=6% Similarity=0.089 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
..+..|+..|+.+|+|..
T Consensus 52 ~tvr~Al~~L~~~G~i~~ 69 (125)
T 3neu_A 52 NTVSRAYQELERAGYIYA 69 (125)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCeEEE
Confidence 789999999999999975
No 133
>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A
Probab=30.19 E-value=1.2e+02 Score=19.83 Aligned_cols=43 Identities=16% Similarity=0.165 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecCCC
Q 034814 8 EFDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYNDSF 50 (82)
Q Consensus 8 ~~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~ 50 (82)
-+...+-|.+|+.+-+.+=.+.-..=+..||+..+.-+..+..
T Consensus 49 l~g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~ 91 (183)
T 2cih_A 49 LKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIQKPDC 91 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCCCc
Confidence 3556777788888777766666666677899998877766543
No 134
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=30.04 E-value=20 Score=26.49 Aligned_cols=21 Identities=38% Similarity=0.490 Sum_probs=18.3
Q ss_pred HHHHHHHHhhhhhhhcCceEE
Q 034814 21 SDFSAFLKFRSEELKCGGRMI 41 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mv 41 (82)
..+..+|.+|.+=|+|||+|+
T Consensus 166 ~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 166 SMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp CSHHHHHHHHHHHEEEEEEEE
T ss_pred chhhhHHHHHHhhCCCCceEC
Confidence 356789999999999999986
No 135
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=30.00 E-value=41 Score=24.11 Aligned_cols=28 Identities=11% Similarity=-0.073 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhhhhhhhcCceEEEEee
Q 034814 18 QFKSDFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 18 Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
+..+++..++..=.+-|+|||.++++..
T Consensus 309 ~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 309 AGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 4557888899888899999999988764
No 136
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=29.99 E-value=32 Score=24.90 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhhhhhhhcCceEEEEe
Q 034814 19 FKSDFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 19 f~~D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
=-..+..+|..=.+=|+|||+|+++.
T Consensus 208 EL~~L~~~L~~a~~~L~~gGrl~vis 233 (285)
T 1wg8_A 208 ELNALKEFLEQAAEVLAPGGRLVVIA 233 (285)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 33568888887777799999996543
No 137
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=29.86 E-value=22 Score=24.04 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=19.5
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
|+..+|+.=.+=|+|||.+++..+.
T Consensus 104 ~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 104 TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 5566777666789999999988765
No 138
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=29.38 E-value=33 Score=24.16 Aligned_cols=26 Identities=12% Similarity=0.202 Sum_probs=21.3
Q ss_pred HHHHHHHHHhhhhhhhcCceEEEEee
Q 034814 20 KSDFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
..+...||+.=.+=|+|||.++++..
T Consensus 279 ~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 279 LDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp HHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 35677888888889999999998763
No 139
>2gsc_A Putative uncharacterized protein XCC0516; four-helix bundle, homopentamer, pentameric toroid, unknown function; 2.45A {Xanthomonas campestris PV} SCOP: a.29.16.1
Probab=29.12 E-value=13 Score=23.36 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 034814 8 EFDVHRAYLDQFKSDFSAFLKF 29 (82)
Q Consensus 8 ~~~V~~AY~~Qf~~D~~~FL~~ 29 (82)
+..+++++.++..+||.+||.-
T Consensus 54 ~aNIaEg~~r~s~~df~~~L~i 75 (128)
T 2gsc_A 54 PSNIAEGAARRSTPDYSRFLSI 75 (128)
T ss_dssp HHHHHHHTTC----CHHHHHHH
T ss_pred HHHHHHHHhcccHHHHHHHHHH
Confidence 4568899999999999999973
No 140
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=29.11 E-value=15 Score=23.37 Aligned_cols=15 Identities=27% Similarity=0.414 Sum_probs=12.4
Q ss_pred hhhhcCceEEEEeee
Q 034814 32 EELKCGGRMILTLLY 46 (82)
Q Consensus 32 ~ELv~GG~mvl~~~g 46 (82)
+-|+|||++++.+..
T Consensus 162 ~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 162 TQLDEGGILVLPVGE 176 (210)
T ss_dssp HTEEEEEEEEEEECS
T ss_pred HhcccCcEEEEEEcC
Confidence 458899999998865
No 141
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=29.03 E-value=71 Score=22.51 Aligned_cols=52 Identities=10% Similarity=-0.189 Sum_probs=29.6
Q ss_pred HHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCCccc--ccccCCC
Q 034814 25 AFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGSLSL--SFNTYQK 81 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGli~~--sFn~P~y 81 (82)
.|++.=.+=|+|||.+++.... +....+.+...+..+.+..-.-+ ...+|.|
T Consensus 211 ~~l~~~~~~LkpgG~lv~~~~~-----~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~ 264 (321)
T 2pt6_A 211 NFYEKIYNALKPNGYCVAQCES-----LWIHVGTIKNMIGYAKKLFKKVEYANISIPTY 264 (321)
T ss_dssp HHHHHHHHHEEEEEEEEEEECC-----TTTCHHHHHHHHHHHHTTCSEEEEEEEECTTS
T ss_pred HHHHHHHHhcCCCcEEEEEcCC-----cccCHHHHHHHHHHHHHHCCCeEEEEEEeccc
Confidence 4444444668899999987521 11222556666666655533222 5556666
No 142
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=28.89 E-value=59 Score=22.71 Aligned_cols=28 Identities=18% Similarity=0.286 Sum_probs=21.1
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
+...+|+.=.+=|+|||++++.-...++
T Consensus 273 ~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 300 (359)
T 1x19_A 273 LSTIMCKKAFDAMRSGGRLLILDMVIDD 300 (359)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEecccCC
Confidence 4667777767779999999887766543
No 143
>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...
Probab=28.83 E-value=99 Score=19.85 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 8 EFDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 8 ~~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
-+.+.+-|.+|+.+-+.+=.+.-..=+.-||+..+.-+..+
T Consensus 44 l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p 84 (174)
T 2v2p_A 44 LEGVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDLQKP 84 (174)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCC
Confidence 45677888888888877777777777788999988776655
No 144
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=28.73 E-value=60 Score=21.27 Aligned_cols=23 Identities=13% Similarity=0.132 Sum_probs=15.6
Q ss_pred HHHHHHHhhhhhhhcCceEEEEe
Q 034814 22 DFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
+...|++.=.+=|+|||+++++-
T Consensus 192 ~~~~~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 192 PVAGLLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEeC
Confidence 44455554455689999999843
No 145
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=28.60 E-value=34 Score=22.10 Aligned_cols=21 Identities=14% Similarity=0.110 Sum_probs=14.9
Q ss_pred HHHHhhhhhhhcCceEEEEeee
Q 034814 25 AFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
.+++.. +=|+|||.+|+....
T Consensus 152 ~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 152 LLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp HHHHHT-TCCCTTCEEEESCCC
T ss_pred HHHHhc-cccCCCeEEEEeCCC
Confidence 455444 789999999886544
No 146
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=28.41 E-value=85 Score=21.43 Aligned_cols=46 Identities=15% Similarity=-0.021 Sum_probs=26.6
Q ss_pred hhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCCccc--ccccCCC
Q 034814 31 SEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGSLSL--SFNTYQK 81 (82)
Q Consensus 31 a~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGli~~--sFn~P~y 81 (82)
.+=|+|||.+++.... +....+.+...+..|.+-.-.-. ...+|.|
T Consensus 176 ~~~L~pgG~lv~~~~~-----~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~ 223 (275)
T 1iy9_A 176 AKALKEDGIFVAQTDN-----PWFTPELITNVQRDVKEIFPITKLYTANIPTY 223 (275)
T ss_dssp HHHEEEEEEEEEECCC-----TTTCHHHHHHHHHHHHTTCSEEEEEEECCTTS
T ss_pred HHhcCCCcEEEEEcCC-----ccccHHHHHHHHHHHHHhCCCeEEEEEecCcc
Confidence 3568899999887421 11123566666666665533222 4566665
No 147
>3iz6_V 40S ribosomal protein S25 (S25E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=28.32 E-value=27 Score=22.03 Aligned_cols=18 Identities=33% Similarity=0.433 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
.+-..+|.+|..+|+|..
T Consensus 75 SLAR~aLreL~~kGlIk~ 92 (108)
T 3iz6_V 75 SLARQAIKDLESRGAIRV 92 (108)
T ss_dssp HHHHHHHHHHHHHHTSCE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 467889999999999977
No 148
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=27.90 E-value=16 Score=26.39 Aligned_cols=24 Identities=29% Similarity=0.256 Sum_probs=19.9
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEe
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
.++..+|+.+.+=|+|||.+++.-
T Consensus 146 ~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 146 SMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CTHHHHHHHHHHHEEEEEEEESSE
T ss_pred HHHHHHHHHHHhhCCCCeEEEEec
Confidence 457789999999999999997643
No 149
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=27.74 E-value=65 Score=22.52 Aligned_cols=53 Identities=17% Similarity=-0.078 Sum_probs=30.8
Q ss_pred HHHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCCccc--ccccCCC
Q 034814 24 SAFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGSLSL--SFNTYQK 81 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGli~~--sFn~P~y 81 (82)
..|++.=.+=|+|||.+++..-+ +....+.+...+..|.+..-... ...+|.|
T Consensus 178 ~~f~~~~~~~LkpgG~lv~~~~s-----~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~ 232 (294)
T 3adn_A 178 SAFYEGCKRCLNPGGIFVAQNGV-----CFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTY 232 (294)
T ss_dssp HHHHHHHHHTEEEEEEEEEEEEE-----CSSCCHHHHHHHHHHHHHCSEEEEEEEECTTS
T ss_pred HHHHHHHHHhcCCCCEEEEecCC-----cccchHHHHHHHHHHHHHCCCeEEEEEEeccc
Confidence 44565556778999999987632 11222556666666655533222 4556665
No 150
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=27.73 E-value=16 Score=23.76 Aligned_cols=15 Identities=33% Similarity=0.605 Sum_probs=11.9
Q ss_pred hhhhcCceEEEEeee
Q 034814 32 EELKCGGRMILTLLY 46 (82)
Q Consensus 32 ~ELv~GG~mvl~~~g 46 (82)
+-|+|||+|++.+..
T Consensus 182 ~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 182 NQLASGGRLIVPVGP 196 (227)
T ss_dssp HTEEEEEEEEEEESC
T ss_pred HHhcCCCEEEEEEec
Confidence 347899999998854
No 151
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=27.65 E-value=36 Score=20.30 Aligned_cols=17 Identities=12% Similarity=0.264 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHcCCcc
Q 034814 57 EPALLVIKDMISEGSLS 73 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~ 73 (82)
..+..+|..|+++|+|.
T Consensus 58 ~tVr~al~~L~~~GlI~ 74 (102)
T 2b0l_A 58 SVIVNALRKLESAGVIE 74 (102)
T ss_dssp HHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHCCCEE
Confidence 68999999999999996
No 152
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=27.62 E-value=35 Score=21.25 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.++.++++|.++|+|+.
T Consensus 179 ~tvsR~l~~l~~~g~I~~ 196 (207)
T 2oz6_A 179 EMVGRVLKSLEEQGLVHV 196 (207)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 789999999999999964
No 153
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=27.49 E-value=74 Score=21.85 Aligned_cols=28 Identities=18% Similarity=0.145 Sum_probs=19.5
Q ss_pred HHHHHHhhhhhhhcCceEEEEeeecCCC
Q 034814 23 FSAFLKFRSEELKCGGRMILTLLYNDSF 50 (82)
Q Consensus 23 ~~~FL~~Ra~ELv~GG~mvl~~~gr~~~ 50 (82)
...+|+.=.+=|+|||++++.-.-.++.
T Consensus 253 ~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 280 (332)
T 3i53_A 253 AVAILRRCAEAAGSGGVVLVIEAVAGDE 280 (332)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCCC--
T ss_pred HHHHHHHHHHhcCCCCEEEEEeecCCCC
Confidence 4566766667789999999976655443
No 154
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=27.07 E-value=81 Score=22.26 Aligned_cols=21 Identities=14% Similarity=0.207 Sum_probs=14.1
Q ss_pred HHHHHhhhhhhhcCceEEEEe
Q 034814 24 SAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
..|++.=.+=|+|||.+++..
T Consensus 202 ~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 202 QSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp --HHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHhhcCCCeEEEEEC
Confidence 445554456689999999875
No 155
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=27.05 E-value=31 Score=23.48 Aligned_cols=24 Identities=8% Similarity=0.091 Sum_probs=15.8
Q ss_pred HHHHHHhhhhhhhcCceEEEEeee
Q 034814 23 FSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 23 ~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
...+++.=++=|+|||+++++.+.
T Consensus 170 ~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 170 HDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEEEEe
Confidence 344555555678999999755443
No 156
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=26.88 E-value=20 Score=22.62 Aligned_cols=23 Identities=9% Similarity=0.083 Sum_probs=17.9
Q ss_pred HHHHHHHhhhhhhhcCceEEEEe
Q 034814 22 DFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
++..+|+.=.+=|+|||.+++..
T Consensus 143 ~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 143 SLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp SHHHHHHHHTTSEEEEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEEe
Confidence 45667777677899999998874
No 157
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=26.82 E-value=24 Score=23.18 Aligned_cols=22 Identities=14% Similarity=0.134 Sum_probs=17.8
Q ss_pred HHHHHHHhhhhhhhcCceEEEE
Q 034814 22 DFSAFLKFRSEELKCGGRMILT 43 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~ 43 (82)
|+..+++.=.+=|+|||++++.
T Consensus 152 ~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 152 RLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCCEEEEE
Confidence 4667777777789999999876
No 158
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=26.80 E-value=56 Score=20.99 Aligned_cols=24 Identities=17% Similarity=0.296 Sum_probs=16.8
Q ss_pred HHHHHHhhhhhhhcCceEEEEeee
Q 034814 23 FSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 23 ~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
....|+.=.+=|+|||.+|+.+..
T Consensus 118 ~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 118 GQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHccCCCEEEEEEcC
Confidence 344555555679999999987653
No 159
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=26.79 E-value=21 Score=23.27 Aligned_cols=26 Identities=27% Similarity=0.391 Sum_probs=19.5
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeec
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYN 47 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr 47 (82)
|...+|+.=.+=|+|||+++++.+..
T Consensus 118 ~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 118 GFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp SSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 45566666667799999999987654
No 160
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=26.74 E-value=36 Score=21.54 Aligned_cols=18 Identities=33% Similarity=0.348 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..+|++|.++|+|+-
T Consensus 202 ~tvsR~l~~L~~~g~I~~ 219 (230)
T 3iwz_A 202 EMAGRVLKKLQADGLLHA 219 (230)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 789999999999999975
No 161
>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A
Probab=26.52 E-value=1.4e+02 Score=19.73 Aligned_cols=39 Identities=10% Similarity=0.202 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 11 VHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 11 V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
..+-|.+|+.+-+.+=.+.-..-+..||+..+.-+.++.
T Consensus 48 ~a~~f~~~s~EE~~HA~kl~~yi~~rgG~~~l~~i~~p~ 86 (191)
T 3kxu_A 48 VSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPA 86 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCcCCCC
Confidence 444455555444443333333336779998887776665
No 162
>1ucr_A Protein DSVD; dissimilatory sulfite reductase D, DNA binding motif, sulfate-reducing bacteria, winged-helix motif, unknown function; 1.20A {Desulfovibrio vulgaris} SCOP: a.4.5.45 PDB: 1wq2_A
Probab=26.51 E-value=35 Score=20.44 Aligned_cols=18 Identities=6% Similarity=0.250 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
.-+-.++++||.||.++=
T Consensus 37 r~vKK~~~~LV~Eg~ley 54 (78)
T 1ucr_A 37 REVKKILTALVNDEVLEY 54 (78)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHhcCceEE
Confidence 457789999999998753
No 163
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=26.39 E-value=38 Score=21.13 Aligned_cols=18 Identities=17% Similarity=0.145 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..+|++|.++|+|+-
T Consensus 182 ~tvsR~l~~L~~~g~I~~ 199 (210)
T 3ryp_A 182 ETVGRILKMLEDQNLISA 199 (210)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCcEEe
Confidence 789999999999999975
No 164
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=26.36 E-value=22 Score=22.87 Aligned_cols=15 Identities=47% Similarity=0.702 Sum_probs=12.0
Q ss_pred hhhhcCceEEEEeee
Q 034814 32 EELKCGGRMILTLLY 46 (82)
Q Consensus 32 ~ELv~GG~mvl~~~g 46 (82)
+-|+|||++++++..
T Consensus 170 ~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 170 DQLKPGGRLILPVGP 184 (226)
T ss_dssp HTEEEEEEEEEEESC
T ss_pred HhcCCCcEEEEEEec
Confidence 458899999998753
No 165
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=26.10 E-value=79 Score=22.01 Aligned_cols=29 Identities=14% Similarity=0.030 Sum_probs=21.0
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDSF 50 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~ 50 (82)
+...+|+.=.+=|+|||++++.-.-.++.
T Consensus 264 ~~~~~L~~~~~~LkpgG~l~i~e~~~~~~ 292 (348)
T 3lst_A 264 DSVRILTNCRRVMPAHGRVLVIDAVVPEG 292 (348)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECCBCSS
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEeccCCC
Confidence 34567776667899999999876655443
No 166
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=26.09 E-value=57 Score=22.29 Aligned_cols=26 Identities=15% Similarity=0.220 Sum_probs=20.0
Q ss_pred HHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 23 FSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 23 ~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
...+|+.=.+=|+|||+++++....+
T Consensus 175 ~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 175 VDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred HHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 55666655666999999999998753
No 167
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=26.04 E-value=17 Score=23.26 Aligned_cols=24 Identities=13% Similarity=0.155 Sum_probs=18.3
Q ss_pred HHHHHHhhhhhhhcCceEEEEeee
Q 034814 23 FSAFLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 23 ~~~FL~~Ra~ELv~GG~mvl~~~g 46 (82)
...+|+.=.+=|+|||++++.+..
T Consensus 119 ~~~~l~~~~~~LkpgG~l~~~~~~ 142 (218)
T 3mq2_A 119 SPEMLRGMAAVCRPGASFLVALNL 142 (218)
T ss_dssp SSHHHHHHHHTEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHcCCCcEEEEEecc
Confidence 356677667789999999997643
No 168
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=25.91 E-value=40 Score=25.15 Aligned_cols=25 Identities=24% Similarity=0.270 Sum_probs=19.5
Q ss_pred HHHHHHHHHhhhhhhhcCceEEEEe
Q 034814 20 KSDFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 20 ~~D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
-..+..+|..=-+=|+|||+|+++.
T Consensus 250 L~~L~~~L~~a~~~L~~gGRl~VIS 274 (347)
T 3tka_A 250 LEEIEQALKSSLNVLAPGGRLSIIS 274 (347)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 3567888887777899999996654
No 169
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=25.87 E-value=18 Score=23.02 Aligned_cols=15 Identities=27% Similarity=0.580 Sum_probs=12.0
Q ss_pred hhhhcCceEEEEeee
Q 034814 32 EELKCGGRMILTLLY 46 (82)
Q Consensus 32 ~ELv~GG~mvl~~~g 46 (82)
+-|+|||++++.+..
T Consensus 165 ~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 165 RQLKDGGKLLMPVGR 179 (215)
T ss_dssp HTEEEEEEEEEEESS
T ss_pred HHcCCCcEEEEEECC
Confidence 457899999998754
No 170
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=25.59 E-value=20 Score=23.41 Aligned_cols=16 Identities=38% Similarity=0.648 Sum_probs=12.7
Q ss_pred hhhhcCceEEEEeeec
Q 034814 32 EELKCGGRMILTLLYN 47 (82)
Q Consensus 32 ~ELv~GG~mvl~~~gr 47 (82)
+-|+|||++++.+...
T Consensus 177 ~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 177 EQLKIGGKLIIPVGSY 192 (235)
T ss_dssp HTEEEEEEEEEEECSS
T ss_pred HhcCCCcEEEEEEecC
Confidence 3588999999988644
No 171
>2v7f_A RPS19, RPS19E SSU ribosomal protein S19E; diamond blackfan anemia small ribosomal subunit; 1.15A {Pyrococcus abyssi} SCOP: a.4.5.84
Probab=25.48 E-value=57 Score=21.17 Aligned_cols=18 Identities=6% Similarity=0.052 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
..+..||..|+.+|+|+.
T Consensus 96 ~tVR~AL~~Le~~GlV~~ 113 (150)
T 2v7f_A 96 SIIRKALQQLEAAGFVEK 113 (150)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 789999999999999975
No 172
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=25.46 E-value=21 Score=25.07 Aligned_cols=21 Identities=29% Similarity=0.292 Sum_probs=17.7
Q ss_pred HHHHHHHHhhhhhhhcCceEE
Q 034814 21 SDFSAFLKFRSEELKCGGRMI 41 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mv 41 (82)
.++..+|+.+.+=|+|||+++
T Consensus 122 ~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 122 SMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CCHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHHHHHhhcCCCeEEE
Confidence 346678888889999999997
No 173
>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A
Probab=25.32 E-value=1.4e+02 Score=19.13 Aligned_cols=41 Identities=12% Similarity=0.129 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 8 EFDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 8 ~~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
-+...+-|.+|+.+-+.+=.+.-..=+.-||+..+.-...+
T Consensus 45 l~g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p 85 (173)
T 1rcd_A 45 LSNFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKP 85 (173)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCC
Confidence 45677888888888877777776677788999888776655
No 174
>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=25.23 E-value=1.5e+02 Score=19.97 Aligned_cols=41 Identities=10% Similarity=0.061 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 9 FDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 9 ~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
+-..+-|.+|+.+-+.+=.+.-..-+..||+..+.-+.++.
T Consensus 70 ~gfa~~f~~~s~EE~~HA~kli~yi~~rGg~~~l~~i~~p~ 110 (212)
T 1z6o_A 70 AGFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQHSTMK 110 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccccccccc
Confidence 45667777777777776666666668899999887777664
No 175
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=25.21 E-value=27 Score=22.64 Aligned_cols=23 Identities=17% Similarity=0.389 Sum_probs=17.5
Q ss_pred HHHHHHHhhhhhhhcCceEEEEe
Q 034814 22 DFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
++..+|+.=.+=|+|||++++..
T Consensus 138 ~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 138 QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEET
T ss_pred HHHHHHHHHHHHcCCCeEEEEEc
Confidence 45566766667799999999863
No 176
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=25.20 E-value=45 Score=21.20 Aligned_cols=18 Identities=22% Similarity=0.394 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..++++|.++|+|+.
T Consensus 178 ~tvsR~l~~L~~~g~I~~ 195 (222)
T 1ft9_A 178 QTTSTALNSLIKEGYISR 195 (222)
T ss_dssp HHHHHHHHHHHHTTSSEE
T ss_pred HHHHHHHHHHHHCCcEEE
Confidence 789999999999999975
No 177
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=25.19 E-value=65 Score=20.80 Aligned_cols=38 Identities=21% Similarity=0.153 Sum_probs=23.8
Q ss_pred HHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCC
Q 034814 25 AFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGS 71 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGl 71 (82)
.||+.=++=|+|||.+++..... +....++..|...|.
T Consensus 134 ~~l~~~~~~LkpgG~l~~~td~~---------~~~~~~~~~~~~~g~ 171 (213)
T 2fca_A 134 HFLKKYEEVMGKGGSIHFKTDNR---------GLFEYSLKSFSEYGL 171 (213)
T ss_dssp HHHHHHHHHHTTSCEEEEEESCH---------HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCEEEEEeCCH---------HHHHHHHHHHHHCCC
Confidence 44544456688999999876221 345555666666664
No 178
>3u5c_Z RP45, S31, YS23, 40S ribosomal protein S25-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_V 3o30_Q 3o2z_Q 3u5g_Z
Probab=25.04 E-value=27 Score=22.07 Aligned_cols=18 Identities=17% Similarity=0.300 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
.+-..+|.+|..+|+|..
T Consensus 74 SLAR~aLreL~~kGlIk~ 91 (108)
T 3u5c_Z 74 SLARIALRHLEKEGIIKP 91 (108)
T ss_dssp THHHHHHHHHSSSSSCEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 567889999999999977
No 179
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=25.00 E-value=48 Score=21.83 Aligned_cols=25 Identities=28% Similarity=0.387 Sum_probs=19.1
Q ss_pred ceEEEEeeecCCCCCCCCcHHHHHHHHHHHHc
Q 034814 38 GRMILTLLYNDSFHATSPGEPALLVIKDMISE 69 (82)
Q Consensus 38 G~mvl~~~gr~~~~~~~~~~~l~~al~dmv~e 69 (82)
|.|++.|-|-+ .+.++.||++|+.+
T Consensus 2 gvm~i~f~gdd-------lea~ekalkemirq 26 (170)
T 4hhu_A 2 GVMVIVFEGDD-------LEALEKALKEMIRQ 26 (170)
T ss_dssp CEEEEEEECSC-------HHHHHHHHHHHHHH
T ss_pred ceEEEEEecCc-------HHHHHHHHHHHHHH
Confidence 77888886532 16899999999876
No 180
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=24.99 E-value=61 Score=22.06 Aligned_cols=29 Identities=17% Similarity=0.248 Sum_probs=20.6
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
.|...+|+.=.+=|+|||++++.-...++
T Consensus 248 ~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 248 ATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 34556666556678999999988766544
No 181
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=24.80 E-value=21 Score=23.01 Aligned_cols=16 Identities=19% Similarity=0.339 Sum_probs=12.9
Q ss_pred hhhhhcCceEEEEeee
Q 034814 31 SEELKCGGRMILTLLY 46 (82)
Q Consensus 31 a~ELv~GG~mvl~~~g 46 (82)
.+-|+|||++++.+..
T Consensus 180 ~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 180 VDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHEEEEEEEEEEEEE
T ss_pred HHhcCCCcEEEEEEcc
Confidence 3568899999999864
No 182
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=24.62 E-value=62 Score=20.10 Aligned_cols=21 Identities=19% Similarity=0.458 Sum_probs=14.7
Q ss_pred HHHhhhhhhhcCceEEEEeee
Q 034814 26 FLKFRSEELKCGGRMILTLLY 46 (82)
Q Consensus 26 FL~~Ra~ELv~GG~mvl~~~g 46 (82)
+|+.=.+=|+|||.+++.+..
T Consensus 136 ~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 136 ITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHccCCCEEEEEEeC
Confidence 444434568999999987654
No 183
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=24.54 E-value=42 Score=21.88 Aligned_cols=18 Identities=11% Similarity=0.189 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..+|++|.++|+|+-
T Consensus 208 ~tvsR~l~~L~~~GlI~~ 225 (243)
T 3la7_A 208 VTVTRLLGDLREKKMISI 225 (243)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 789999999999999975
No 184
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=24.47 E-value=55 Score=23.64 Aligned_cols=28 Identities=18% Similarity=0.249 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhhhhhhhcCceEEEEee
Q 034814 18 QFKSDFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 18 Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
+..+++..+++.=.+-|+|||.+++...
T Consensus 305 ~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 305 SVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4556777788777789999999988874
No 185
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=24.40 E-value=43 Score=20.95 Aligned_cols=18 Identities=28% Similarity=0.427 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..++++|.++|+|+-
T Consensus 178 ~tvsR~l~~l~~~g~I~~ 195 (216)
T 4ev0_A 178 ETVSRVLHALAEEGVVRL 195 (216)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 789999999999999964
No 186
>3by6_A Predicted transcriptional regulator; structural genomics, PSI-2, MCSG, structure initiative, midwest center for structural genomic binding; 2.20A {Oenococcus oeni}
Probab=24.37 E-value=44 Score=20.47 Aligned_cols=40 Identities=5% Similarity=0.053 Sum_probs=25.3
Q ss_pred hhhhhcCceE-EEEeeecCCCCCCCCc-HHHHHHHHHHHHcCCccc
Q 034814 31 SEELKCGGRM-ILTLLYNDSFHATSPG-EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 31 a~ELv~GG~m-vl~~~gr~~~~~~~~~-~~l~~al~dmv~eGli~~ 74 (82)
..++.||.+| -..-++.. .+-. ..+..|+..|+.+|+|..
T Consensus 26 ~g~~~~G~~lPse~~La~~----~~vSr~tvr~Al~~L~~~Gli~~ 67 (126)
T 3by6_A 26 TDVLSANDQLPSVRETALQ----EKINPNTVAKAYKELEAQKVIRT 67 (126)
T ss_dssp TTSSCTTCEECCHHHHHHH----HTCCHHHHHHHHHHHHHTTSEEE
T ss_pred hCCCCCCCcCcCHHHHHHH----HCcCHHHHHHHHHHHHHCCCEEE
Confidence 4578888776 11111111 0111 689999999999999975
No 187
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=24.36 E-value=43 Score=21.01 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..++++|.++|+|+-
T Consensus 184 ~tvsR~l~~L~~~g~I~~ 201 (220)
T 3dv8_A 184 EVITRMLRYFQVEGLVKL 201 (220)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 789999999999999964
No 188
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=24.30 E-value=31 Score=23.23 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=19.9
Q ss_pred HHHHHHHhhhhhhhcCceEEEEee
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
++..|++.=++=|+|||++++...
T Consensus 148 ~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 148 LFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEc
Confidence 477888877888999999998763
No 189
>2ra5_A Putative transcriptional regulator; beta structure, UTRA domain, structural genomics, PSI-2, protein structure initiative; HET: SRT; 2.40A {Streptomyces coelicolor A3} SCOP: d.190.1.2
Probab=24.28 E-value=14 Score=25.28 Aligned_cols=49 Identities=14% Similarity=0.171 Sum_probs=4.1
Q ss_pred HHHHHHHHHHHHhhhhhhhcCceEEEEeeecCCCCCCCC----c-HHHHHHHHHHHHcCCccc
Q 034814 17 DQFKSDFSAFLKFRSEELKCGGRMILTLLYNDSFHATSP----G-EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 17 ~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~----~-~~l~~al~dmv~eGli~~ 74 (82)
+|...++..-+ .+.++.||.+| ++....+. . ..+.+|+..|+++|+|..
T Consensus 19 ~~i~~~l~~~I--~~g~~~~g~~l-------Pse~~La~~~~vSr~tvr~Al~~L~~~G~i~~ 72 (247)
T 2ra5_A 19 FQLSQQLEAAI--EHGALTPGSLL-------GNEIELAARLGLSRPTVRQAIQSLVDKGLLVR 72 (247)
T ss_dssp ----------------------------------------------------------CEEEE
T ss_pred HHHHHHHHHHH--HhCCCCCCCCC-------cCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 34444443332 24567788776 22222211 1 678999999999999965
No 190
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=24.21 E-value=44 Score=20.92 Aligned_cols=18 Identities=28% Similarity=0.372 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..+|++|.++|+|+-
T Consensus 161 ~tvsR~l~~L~~~g~I~~ 178 (202)
T 2zcw_A 161 ETVTKVIGELAREGYIRS 178 (202)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 789999999999999974
No 191
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=24.18 E-value=23 Score=22.83 Aligned_cols=16 Identities=50% Similarity=0.634 Sum_probs=12.5
Q ss_pred hhhhcCceEEEEeeec
Q 034814 32 EELKCGGRMILTLLYN 47 (82)
Q Consensus 32 ~ELv~GG~mvl~~~gr 47 (82)
+-|+|||++++.....
T Consensus 153 ~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 153 EQLKEGGIMILPIGVG 168 (231)
T ss_dssp HTEEEEEEEEEEECSS
T ss_pred HHcCCCcEEEEEEcCC
Confidence 3588999999987543
No 192
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=24.15 E-value=32 Score=22.38 Aligned_cols=52 Identities=15% Similarity=0.018 Sum_probs=28.4
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCC---CCCCCCc-HH-HHHHHHHHHHcCCcc
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDS---FHATSPG-EP-ALLVIKDMISEGSLS 73 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~---~~~~~~~-~~-l~~al~dmv~eGli~ 73 (82)
++..+|+.=.+=|+|||++++....... ....... .. -...+..|.+.|.-.
T Consensus 148 ~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 148 QFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp HHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred hHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 4455666556678999999877554221 1111111 22 233445566777753
No 193
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=24.08 E-value=48 Score=21.34 Aligned_cols=18 Identities=11% Similarity=0.213 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..+|++|.++|+|+-
T Consensus 201 ~tvsR~l~~l~~~glI~~ 218 (232)
T 1zyb_A 201 LNISKTLNELQDNGLIEL 218 (232)
T ss_dssp HHHHHHHHHHHHTTSCEE
T ss_pred hHHHHHHHHHHHCCCEEe
Confidence 789999999999999974
No 194
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=24.03 E-value=41 Score=21.01 Aligned_cols=18 Identities=28% Similarity=0.396 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..+|++|.++|+|+.
T Consensus 154 ~tvsR~l~~L~~~g~I~~ 171 (195)
T 3b02_A 154 ESVSKVLADLRREGLIAT 171 (195)
T ss_dssp HHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 889999999999999975
No 195
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=23.92 E-value=44 Score=21.29 Aligned_cols=18 Identities=28% Similarity=0.416 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..++++|.++|+|+-
T Consensus 195 ~tvsR~l~~l~~~g~I~~ 212 (232)
T 2gau_A 195 SNAIRTLSTFVSERMLAL 212 (232)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEee
Confidence 789999999999999975
No 196
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=23.87 E-value=40 Score=22.43 Aligned_cols=23 Identities=17% Similarity=0.226 Sum_probs=15.5
Q ss_pred HHHHHHhhh-hhhhcCceEEEEee
Q 034814 23 FSAFLKFRS-EELKCGGRMILTLL 45 (82)
Q Consensus 23 ~~~FL~~Ra-~ELv~GG~mvl~~~ 45 (82)
...+|+.=. .=|+|||+|++.-.
T Consensus 165 ~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 165 TFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp HHHHHHHHHHHTCCTTCEEEECSC
T ss_pred HHHHHHHHHHhhCCCCCEEEEEeC
Confidence 444555433 36999999999654
No 197
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=23.83 E-value=1.1e+02 Score=20.80 Aligned_cols=26 Identities=15% Similarity=0.129 Sum_probs=19.1
Q ss_pred HHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 24 SAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
..+|+.=.+=|+|||++++.-...++
T Consensus 252 ~~~l~~~~~~L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 252 LRLLGNCREAMAGDGRVVVIERTISA 277 (334)
T ss_dssp HHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred HHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 46666556678999999998766544
No 198
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=23.78 E-value=44 Score=21.62 Aligned_cols=18 Identities=11% Similarity=0.154 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..+|++|.++|+|+.
T Consensus 185 etvsR~l~~l~~~glI~~ 202 (238)
T 2bgc_A 185 SAVSRIISKLKQEKVIVY 202 (238)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 489999999999999975
No 199
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=23.66 E-value=75 Score=23.27 Aligned_cols=28 Identities=14% Similarity=0.120 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHhhhhhhhcCceEEEEe
Q 034814 17 DQFKSDFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 17 ~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
....+|+..+++.=.+=|+|||.+++..
T Consensus 299 ~~~~~~~~~ll~~a~~~LkpGG~Lv~~s 326 (393)
T 4dmg_A 299 PAMKRHLVDLVREALRLLAEEGFLWLSS 326 (393)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3566788888887778899999998655
No 200
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=23.61 E-value=91 Score=21.94 Aligned_cols=29 Identities=7% Similarity=0.085 Sum_probs=20.0
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEeeecCC
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTLLYNDS 49 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~ 49 (82)
.|...+|+.=.+=|+|||++++.-.-.++
T Consensus 264 ~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 264 EEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 34556676556679999999987654433
No 201
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=23.54 E-value=1.5e+02 Score=18.77 Aligned_cols=40 Identities=5% Similarity=-0.123 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcCceEEEEeeecC
Q 034814 9 FDVHRAYLDQFKSDFSAFLKFRSEELKCGGRMILTLLYND 48 (82)
Q Consensus 9 ~~V~~AY~~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~ 48 (82)
+.+.+-|.+|+.+-+.+--+.-..=+.-||...+.-...+
T Consensus 37 ~~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p 76 (167)
T 1krq_A 37 DGAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQP 76 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC
Confidence 4566777777777776665555555667898666554444
No 202
>2key_A Putative phage integrase; protein structure, PSI, NESG, structural genomics, unknown F protein structure initiative; NMR {Bacteroides fragilis}
Probab=23.19 E-value=72 Score=17.77 Aligned_cols=25 Identities=12% Similarity=0.228 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHcCCccc----ccccCCC
Q 034814 57 EPALLVIKDMISEGSLSL----SFNTYQK 81 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~----sFn~P~y 81 (82)
..|...++-++.+|+|+. ...+|.+
T Consensus 80 ~~lr~~~~~a~~~~~i~~nP~~~v~~p~~ 108 (112)
T 2key_A 80 STIKIYVSAAIKKGYMENDPFKDFGLEHH 108 (112)
T ss_dssp HHHHHHHHHHHHTTSCCSCHHHHHTCCCC
T ss_pred HHHHHHHHHHHHCCCcccCCcccCCCccc
Confidence 668888999999999987 4555543
No 203
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=23.12 E-value=47 Score=21.15 Aligned_cols=18 Identities=22% Similarity=0.276 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..+|++|.++|+|+-
T Consensus 190 ~tvsR~l~~L~~~g~I~~ 207 (231)
T 3e97_A 190 ETVSRVLKRLEAHNILEV 207 (231)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCcEEe
Confidence 789999999999999975
No 204
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=22.92 E-value=44 Score=21.11 Aligned_cols=18 Identities=22% Similarity=0.313 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..++++|.++|+|+-
T Consensus 193 ~tvsR~l~~l~~~g~I~~ 210 (227)
T 3dkw_A 193 ETFSRIMHRLGDEGIIHL 210 (227)
T ss_dssp HHHHHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHHHCCcEEe
Confidence 789999999999999975
No 205
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=22.73 E-value=48 Score=20.96 Aligned_cols=18 Identities=17% Similarity=0.300 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..++++|.++|+|+.
T Consensus 182 ~tvsR~l~~l~~~g~I~~ 199 (220)
T 2fmy_A 182 QTVSVLLNDFKKMGILER 199 (220)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 789999999999999863
No 206
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=22.67 E-value=51 Score=24.01 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=19.0
Q ss_pred HHHHHHHHhhhhhhhcCceEEEEe
Q 034814 21 SDFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 21 ~D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
.+...|++.=.+=|+|||+++++.
T Consensus 317 ~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 317 DVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCcCcEEEEEE
Confidence 456677777677899999999985
No 207
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=22.65 E-value=65 Score=22.24 Aligned_cols=29 Identities=10% Similarity=0.186 Sum_probs=21.6
Q ss_pred HHHHHHHhhhhhhhcCceEEEEeeecCCC
Q 034814 22 DFSAFLKFRSEELKCGGRMILTLLYNDSF 50 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~ 50 (82)
+...+|+.=.+=|+|||++++.-...++.
T Consensus 265 ~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (352)
T 3mcz_A 265 EAREVIGHAAGLVKPGGALLILTMTMNDD 293 (352)
T ss_dssp HHHHHHHHHHHTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 45677776677899999999987665443
No 208
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=22.46 E-value=27 Score=21.39 Aligned_cols=18 Identities=6% Similarity=-0.128 Sum_probs=13.6
Q ss_pred hhhhhcCceEEEEeeecC
Q 034814 31 SEELKCGGRMILTLLYND 48 (82)
Q Consensus 31 a~ELv~GG~mvl~~~gr~ 48 (82)
.+=|+|||.+++......
T Consensus 141 ~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 141 RQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp TTCEEEEEEEEEEEETTC
T ss_pred hcccCCCCEEEEEeCCcc
Confidence 445799999998876653
No 209
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=22.39 E-value=49 Score=20.96 Aligned_cols=18 Identities=22% Similarity=0.312 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..++++|.++|+|+.
T Consensus 192 ~tvsR~l~~l~~~g~I~~ 209 (227)
T 3d0s_A 192 ETVNKALADFAHRGWIRL 209 (227)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEe
Confidence 789999999999999974
No 210
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=22.23 E-value=36 Score=22.87 Aligned_cols=20 Identities=20% Similarity=0.120 Sum_probs=14.5
Q ss_pred HHHHhhhhhhhcCceEEEEe
Q 034814 25 AFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~ 44 (82)
.+|+.=.+=|+|||++++++
T Consensus 118 ~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 118 LILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp GTHHHHHHHSCTTCEEEEEE
T ss_pred HHHHHHHHhccCCCEEEEEE
Confidence 34555556789999999974
No 211
>2xzm_8 RPS25E,; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_8
Probab=22.18 E-value=33 Score=22.74 Aligned_cols=18 Identities=11% Similarity=0.087 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
.+-..+|.+|..+|+|..
T Consensus 78 SLARkaLreL~~kGlIk~ 95 (143)
T 2xzm_8 78 SLARQLMRTMADRKLVEK 95 (143)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 567889999999999977
No 212
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=21.94 E-value=63 Score=18.33 Aligned_cols=17 Identities=6% Similarity=0.348 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHcCCcc
Q 034814 57 EPALLVIKDMISEGSLS 73 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~ 73 (82)
+.+-.+|+.|.++|+|.
T Consensus 40 deV~~~LrrLe~KGLI~ 56 (59)
T 2xvc_A 40 QEVVKLLEALKNKGLIA 56 (59)
T ss_dssp HHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHCCCee
Confidence 67889999999999984
No 213
>3fsi_A RT, reverse transcriptase domain; transferase/DNA MMLV RT, protein-DNA complex, drug-DNA complex; HET: OWL; 1.75A {Moloney murine leukemia virus} SCOP: e.8.1.2 PDB: 1d1u_A 1n4l_A* 1ztt_A 2fjv_A* 2fjw_A 2fjx_A* 2fvp_A 2fvq_A 2fvr_A 2fvs_A 2r2r_A* 2r2s_A* 2r2t_A* 2r2u_A* 1ztw_A* 1i6j_A 1qaj_A* 1d0e_A* 1nnd_A 1mml_A ...
Probab=21.91 E-value=62 Score=21.80 Aligned_cols=24 Identities=21% Similarity=0.176 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHcCCccc---ccccCC
Q 034814 57 EPALLVIKDMISEGSLSL---SFNTYQ 80 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~---sFn~P~ 80 (82)
+.+..-+++|.+.|+|++ .++.|+
T Consensus 49 ~~~~~~i~~ll~~G~I~~~~sp~~sp~ 75 (255)
T 3fsi_A 49 LGIKPHIQRLLDQGILVPCQSPWNTPL 75 (255)
T ss_dssp HHHHHHHHHHHHTTSEEEECCSCBCCB
T ss_pred HHHHHHHHHHHhCCeEEecCCCeECce
Confidence 789999999999999998 566665
No 214
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=21.91 E-value=86 Score=21.40 Aligned_cols=52 Identities=13% Similarity=0.038 Sum_probs=27.1
Q ss_pred HHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHHHHcCCccc--ccccCCC
Q 034814 25 AFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDMISEGSLSL--SFNTYQK 81 (82)
Q Consensus 25 ~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~eGli~~--sFn~P~y 81 (82)
.|++.=.+=|+|||.+++.... . ....+.+......+..-.-... ...+|.|
T Consensus 174 ~~l~~~~~~L~pgG~lv~~~~~-~----~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~ 227 (281)
T 1mjf_A 174 EFYRYVYDALNNPGIYVTQAGS-V----YLFTDELISAYKEMKKVFDRVYYYSFPVIGY 227 (281)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEE-T----TTSHHHHHHHHHHHHHHCSEEEEEEECCTTS
T ss_pred HHHHHHHHhcCCCcEEEEEcCC-c----ccCHHHHHHHHHHHHHHCCceEEEEEecCCC
Confidence 3444444568999999887422 1 1122455555555544322112 4556665
No 215
>1hw1_A FADR, fatty acid metabolism regulator protein; helix-turn-helix, helix bundle, transcription; 1.50A {Escherichia coli} SCOP: a.4.5.6 a.78.1.1 PDB: 1hw2_A 1e2x_A 1h9g_A* 1h9t_A
Probab=21.81 E-value=50 Score=21.67 Aligned_cols=18 Identities=17% Similarity=0.322 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
..+..||..|+.+|+|+.
T Consensus 46 ~tVReAL~~L~~eGlv~~ 63 (239)
T 1hw1_A 46 TTLREVLQRLARDGWLTI 63 (239)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCcEEE
Confidence 789999999999999975
No 216
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=21.76 E-value=82 Score=23.22 Aligned_cols=43 Identities=14% Similarity=0.030 Sum_probs=28.5
Q ss_pred hhhhhcCceEEEEeee-cCCCCCCCCcHHHHHHHHHHHHcCCcc
Q 034814 31 SEELKCGGRMILTLLY-NDSFHATSPGEPALLVIKDMISEGSLS 73 (82)
Q Consensus 31 a~ELv~GG~mvl~~~g-r~~~~~~~~~~~l~~al~dmv~eGli~ 73 (82)
+.+++|.|+-++++-. .......+.++++..++.||.+-|+++
T Consensus 338 ~p~~ap~g~~~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~~~~~ 381 (484)
T 4dsg_A 338 SKYNVPEGHWSLMLEVSESKYKPVNHSTLIEDCIVGCLASNLLL 381 (484)
T ss_dssp CGGGSCTTEEEEEEEEEEBTTBCCCTTSHHHHHHHHHHHTTSCC
T ss_pred CcccCCCCeEEEEEEEecCcCCcCCHHHHHHHHHHHHHHcCCCC
Confidence 4567888877665433 222222233489999999999998874
No 217
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=21.72 E-value=53 Score=19.62 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=14.1
Q ss_pred hhhhhcCceEEEEeeecC
Q 034814 31 SEELKCGGRMILTLLYND 48 (82)
Q Consensus 31 a~ELv~GG~mvl~~~gr~ 48 (82)
.+=|+|||.+++.+....
T Consensus 134 ~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 134 SGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp HTCEEEEEEEEEEEETTS
T ss_pred hcccCCCcEEEEEeCCcc
Confidence 456899999999887654
No 218
>3sq7_A Tyrosyl-DNA phosphodiesterase 1; DNA binding, nuclear, hydrolase; 2.00A {Saccharomyces cerevisiae} PDB: 3sq5_A 3sq8_A* 3sq3_A
Probab=21.46 E-value=1.8e+02 Score=22.33 Aligned_cols=48 Identities=10% Similarity=0.085 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHh---hh--hhhh-----------cCceEEEEeeecCCCCCCCCcHHHHHHHHHHHH
Q 034814 18 QFKSDFSAFLKF---RS--EELK-----------CGGRMILTLLYNDSFHATSPGEPALLVIKDMIS 68 (82)
Q Consensus 18 Qf~~D~~~FL~~---Ra--~ELv-----------~GG~mvl~~~gr~~~~~~~~~~~l~~al~dmv~ 68 (82)
.|++|+..||++ .. ++++ .+..+|-+.+|+.. ..+.--|..+|.++..
T Consensus 155 ~Fk~dL~~yL~~y~~~~l~~~~i~~l~~~DFS~~~~v~lV~SvPG~~~---~~G~~~L~~~L~~~~~ 218 (470)
T 3sq7_A 155 PFKRSLIEYLNSYHLKDIDELITKSVEEVNFAPLSELEFVYSTPSKFQ---SSGLLSFYNKLEKLSA 218 (470)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHTHHHHHTEECGGGTTCEEEEECCCTTS---CCHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHhCCchhHHHHHHHHHhCCCCCCCcEEEEEecCCCCc---cchHHHHHHHHHHhcc
Confidence 699999999998 33 3443 37899999999742 2233678888887764
No 219
>1bm9_A RTP, TER, replication terminator protein; DNA-binding protein, contrahelicase; 2.00A {Bacillus subtilis} SCOP: a.4.5.7 PDB: 1f4k_A 1j0r_A 2dpd_A 2dpu_A 2efw_A* 2dqr_A
Probab=21.01 E-value=1.1e+02 Score=19.31 Aligned_cols=20 Identities=20% Similarity=0.393 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 034814 10 DVHRAYLDQFKSDFSAFLKF 29 (82)
Q Consensus 10 ~V~~AY~~Qf~~D~~~FL~~ 29 (82)
.-.+.|.+|+..+|..|...
T Consensus 94 G~~~~~~~~~~~~~~~~~~~ 113 (122)
T 1bm9_A 94 EAAKLYKKQLKVELDRCKKL 113 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHH
Confidence 33445999999999998864
No 220
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=20.99 E-value=1.3e+02 Score=22.02 Aligned_cols=38 Identities=16% Similarity=0.068 Sum_probs=24.2
Q ss_pred HHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHHHH
Q 034814 26 FLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIKDM 66 (82)
Q Consensus 26 FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~dm 66 (82)
.|+.=++=++|||+||=++. +-.+...++.+...|...
T Consensus 266 iL~~a~~~lkpGG~LVYsTC---Sl~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 266 LLAAGLLATKPGGHVVYSTC---SLSHLQNEYVVQGAIELL 303 (359)
T ss_dssp HHHHHHHTEEEEEEEEEEES---CCCTTTTHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcEEEEEeC---CCchhhCHHHHHHHHHhC
Confidence 45555556789999988773 333444446777777544
No 221
>1xaw_A Occludin; coiled-coil, cell adhesion; 1.45A {Homo sapiens} SCOP: h.4.17.1 PDB: 1wpa_A 3g7c_A
Probab=20.97 E-value=1.4e+02 Score=19.54 Aligned_cols=26 Identities=12% Similarity=0.281 Sum_probs=21.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhh
Q 034814 7 SEFDVHRAYLDQFKSDFSAFLKFRSE 32 (82)
Q Consensus 7 s~~~V~~AY~~Qf~~D~~~FL~~Ra~ 32 (82)
+..+.++.|...|..|+..+..+-|+
T Consensus 42 ~S~eqR~rYK~~F~~dy~EYk~Lhae 67 (140)
T 1xaw_A 42 TSDQQRQLYKRNFDTGLQEYKSLQSV 67 (140)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35678999999999999999877654
No 222
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=20.85 E-value=2e+02 Score=21.56 Aligned_cols=38 Identities=11% Similarity=0.159 Sum_probs=22.0
Q ss_pred HHHHHhhhhhhhcCceEEEEeeecCCCCCCCCcHHHHHHHH
Q 034814 24 SAFLKFRSEELKCGGRMILTLLYNDSFHATSPGEPALLVIK 64 (82)
Q Consensus 24 ~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~~~~~~l~~al~ 64 (82)
..+|+.=.+=|+|||+||.+...- .+....+.+...|.
T Consensus 226 ~~iL~~a~~~LkpGG~LvysTcs~---~~~Ene~vv~~~l~ 263 (479)
T 2frx_A 226 RELIDSAFHALRPGGTLVYSTCTL---NQEENEAVCLWLKE 263 (479)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCC---SSTTTHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEecccC---CcccCHHHHHHHHH
Confidence 345555556689999999876332 22222345555554
No 223
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=20.82 E-value=61 Score=17.00 Aligned_cols=13 Identities=23% Similarity=0.463 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHc
Q 034814 57 EPALLVIKDMISE 69 (82)
Q Consensus 57 ~~l~~al~dmv~e 69 (82)
..+.+||.||..|
T Consensus 22 navrqALQdLlse 34 (40)
T 4e17_B 22 NAVRQALQDLLSE 34 (40)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6789999999876
No 224
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=20.81 E-value=76 Score=24.17 Aligned_cols=16 Identities=31% Similarity=0.293 Sum_probs=13.1
Q ss_pred CCChHHHHHHHHHHHH
Q 034814 5 PMSEFDVHRAYLDQFK 20 (82)
Q Consensus 5 ~~s~~~V~~AY~~Qf~ 20 (82)
..+-++|.+||.+|..
T Consensus 129 ~~~l~~V~~AY~EQ~~ 144 (396)
T 4dnh_A 129 DVSIDDILAAYESQIE 144 (396)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 3378899999999953
No 225
>3edp_A LIN2111 protein; APC88337, listeria innocua CLIP11262, structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.09A {Listeria innocua}
Probab=20.72 E-value=54 Score=22.13 Aligned_cols=49 Identities=18% Similarity=0.186 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhhhhhhhcCceEEEEeeecCCCCCC----CCc-HHHHHHHHHHHHcCCccc
Q 034814 17 DQFKSDFSAFLKFRSEELKCGGRMILTLLYNDSFHAT----SPG-EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 17 ~Qf~~D~~~FL~~Ra~ELv~GG~mvl~~~gr~~~~~~----~~~-~~l~~al~dmv~eGli~~ 74 (82)
.|...++..-+ .+.++.||.+| ++.... +-. ..+.+||..|+++|+|..
T Consensus 12 ~~i~~~l~~~I--~~g~~~~g~~l-------Pse~~La~~~~vSr~tvr~Al~~L~~~G~i~~ 65 (236)
T 3edp_A 12 EVIASKIKDSI--NRDEYKTGMLM-------PNETALQEIYSSSRTTIRRAVDLLVEEGLVVR 65 (236)
T ss_dssp HHHHHHHHHHH--HTTSSCCCC---------CCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHH--HhCCCCCcCCC-------cCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 45555554433 34467777665 322111 111 789999999999999976
No 226
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=20.56 E-value=1.5e+02 Score=21.48 Aligned_cols=23 Identities=26% Similarity=0.297 Sum_probs=17.1
Q ss_pred HHHHHHhhhhhhhcCceEEEEee
Q 034814 23 FSAFLKFRSEELKCGGRMILTLL 45 (82)
Q Consensus 23 ~~~FL~~Ra~ELv~GG~mvl~~~ 45 (82)
...+|+.=.+=|+|||+||++..
T Consensus 353 q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 353 QSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEES
T ss_pred HHHHHHHHHHhcCCCCEEEEEEC
Confidence 34566655677899999998774
No 227
>1oyi_A Double-stranded RNA-binding protein; (alpha+beta) helix-turn-helix, viral protein; NMR {Vaccinia virus} SCOP: a.4.5.19
Probab=20.51 E-value=75 Score=18.76 Aligned_cols=24 Identities=4% Similarity=-0.137 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHcCCccc-ccccCC
Q 034814 57 EPALLVIKDMISEGSLSL-SFNTYQ 80 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~-sFn~P~ 80 (82)
..+.+-|..|..+|+|.. .-|.|.
T Consensus 45 ~aVr~~L~~Le~eG~I~~~~~~PP~ 69 (82)
T 1oyi_A 45 REVNKALYDLQRSAMVYSSDDIPPR 69 (82)
T ss_dssp HHHHHHHHHHHHHTSSEECSSSSCE
T ss_pred HHHHHHHHHHHHCCCEEeCCCCCCc
Confidence 679999999999999987 666664
No 228
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=20.45 E-value=35 Score=21.72 Aligned_cols=23 Identities=13% Similarity=-0.018 Sum_probs=15.7
Q ss_pred HHHHHHHhhhhhhhcCceEEEEe
Q 034814 22 DFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
+...||+.=.+=|+|||.+++..
T Consensus 138 ~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 138 NGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEES
T ss_pred hhHHHHHHHHHhcCCCeEEEEEC
Confidence 34455555556799999998843
No 229
>2ek5_A Predicted transcriptional regulators; helix-turn-helix, interwined alpha helices; 2.20A {Corynebacterium glutamicum atcc 13032} PDB: 2du9_A
Probab=20.35 E-value=51 Score=20.35 Aligned_cols=18 Identities=17% Similarity=0.073 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
..+..|+..|+.+|+|..
T Consensus 43 ~tVr~Al~~L~~~Gli~~ 60 (129)
T 2ek5_A 43 ATARNGLTLLVEAGILYK 60 (129)
T ss_dssp HHHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHHHCCcEEE
Confidence 689999999999999975
No 230
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=20.29 E-value=39 Score=22.83 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=17.5
Q ss_pred HHHHHHHhhhhhhhcCceEEEEe
Q 034814 22 DFSAFLKFRSEELKCGGRMILTL 44 (82)
Q Consensus 22 D~~~FL~~Ra~ELv~GG~mvl~~ 44 (82)
|+..+++.=.+=|+|||++++..
T Consensus 162 ~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 162 PLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCeEEEEEe
Confidence 45667777677889999988754
No 231
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=20.22 E-value=57 Score=21.55 Aligned_cols=18 Identities=17% Similarity=0.145 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
+.+..+|++|.++|+|+-
T Consensus 232 ~tvsR~l~~L~~~GlI~~ 249 (260)
T 3kcc_A 232 ETVGRILKMLEDQNLISA 249 (260)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 789999999999999975
No 232
>2wwb_B SEC61gamma, protein transport protein SEC61 subunit gamma; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=20.15 E-value=69 Score=18.40 Aligned_cols=13 Identities=31% Similarity=0.314 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHH
Q 034814 16 LDQFKSDFSAFLK 28 (82)
Q Consensus 16 ~~Qf~~D~~~FL~ 28 (82)
.++|-+|+.+||+
T Consensus 11 ~~~f~k~~~r~lk 23 (68)
T 2wwb_B 11 SRQFVKDSIRLVK 23 (68)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4689999999997
No 233
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=20.05 E-value=55 Score=19.10 Aligned_cols=18 Identities=6% Similarity=0.231 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHcCCccc
Q 034814 57 EPALLVIKDMISEGSLSL 74 (82)
Q Consensus 57 ~~l~~al~dmv~eGli~~ 74 (82)
..+...|+.|++.|+|+.
T Consensus 43 ~tls~~L~~Le~~GlI~r 60 (107)
T 2hzt_A 43 KMLTQQLRELEADGVINR 60 (107)
T ss_dssp HHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHHCCCEEE
Confidence 679999999999999976
Done!