BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034816
         (82 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LUV2|POP3_ARATH Probable protein Pop3 OS=Arabidopsis thaliana GN=At3g17210 PE=1
           SV=1
          Length = 109

 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 66/85 (77%), Gaps = 4/85 (4%)

Query: 2   IAELIRSCCGL----ELLAVKYKGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHV 57
           I ELI+    L    E +   + GK+VSIENLHQG+THIFESTFES E VAEY+AHPAHV
Sbjct: 25  IEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYTHIFESTFESKEAVAEYIAHPAHV 84

Query: 58  EYANLFLANLEKVLVIDYKPTTVRV 82
           E+A +FL +L+KVLVIDYKPT+V +
Sbjct: 85  EFATIFLGSLDKVLVIDYKPTSVSL 109


>sp|I6WU39|OLIAC_CANSA Olivetolic acid cyclase OS=Cannabis sativa GN=OAC PE=1 SV=1
          Length = 101

 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 42/59 (71%)

Query: 19 YKGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKP 77
          Y GK+V+ +N  +G+THI E TFES E + +Y+ HPAHV + +++ +  EK+L+ DY P
Sbjct: 41 YWGKDVTQKNKEEGYTHIVEVTFESVETIQDYIIHPAHVGFGDVYRSFWEKLLIFDYTP 99


>sp|Q9FK81|Y5258_ARATH Uncharacterized protein At5g22580 OS=Arabidopsis thaliana
           GN=At5g22580 PE=1 SV=1
          Length = 111

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 37/57 (64%)

Query: 25  SIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDYKPTTVR 81
           S + L QGFTH F  TFE+ +G   + +HP HVE++  F A ++K++++D+    V+
Sbjct: 48  SHDMLRQGFTHAFSMTFENKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVK 104


>sp|P84986|STBP1_POPEU Stable protein 1 (Fragments) OS=Populus euphratica PE=1 SV=1
          Length = 56

 Score = 37.7 bits (86), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 32 GFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEK 69
          G+TH FESTFES  G+ EY+   A   +A  FL  L +
Sbjct: 1  GYTHAFESTFESKSGLQEYLDSAALAAFAEGFLPTLSQ 38


>sp|A1KBD3|LEU1_AZOSB 2-isopropylmalate synthase OS=Azoarcus sp. (strain BH72) GN=leuA
           PE=3 SV=1
          Length = 572

 Score = 30.8 bits (68), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 21/41 (51%)

Query: 13  ELLAVKYKGKNVSIENLHQGFTHIFESTFESTEGVAEYVAH 53
           EL+   +   +V+IE L Q   H+ E TFES  G    + H
Sbjct: 94  ELIEGGHIPDDVTIEVLTQARPHLIERTFESVRGAKRAIVH 134


>sp|Q83G52|SYI_TROWT Isoleucine--tRNA ligase OS=Tropheryma whipplei (strain Twist)
           GN=ileS PE=3 SV=2
          Length = 1056

 Score = 30.4 bits (67), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 27/56 (48%)

Query: 3   AELIRSCCGLELLAVKYKGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVE 58
           A + R+  G E+  + YK       +LH  FT + ++  + TEG     A PAH E
Sbjct: 307 ASIRRTLLGKEIEGIHYKPLFDYYADLHNAFTILSDNYVDVTEGTGIVHASPAHGE 362


>sp|Q83I16|SYI_TROW8 Isoleucine--tRNA ligase OS=Tropheryma whipplei (strain TW08/27)
           GN=ileS PE=3 SV=1
          Length = 1056

 Score = 30.4 bits (67), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 27/56 (48%)

Query: 3   AELIRSCCGLELLAVKYKGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVE 58
           A + R+  G E+  + YK       +LH  FT + ++  + TEG     A PAH E
Sbjct: 307 ASIRRTLLGKEIEGIHYKPLFDYYADLHNAFTILSDNYVDVTEGTGIVHASPAHGE 362


>sp|Q9M9C5|Y1680_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g68400
           OS=Arabidopsis thaliana GN=At1g68400 PE=2 SV=1
          Length = 670

 Score = 29.3 bits (64), Expect = 7.8,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 26/62 (41%)

Query: 16  AVKYKGKNVSIENLHQGFTHIFESTFESTEGVAEYVAHPAHVEYANLFLANLEKVLVIDY 75
           AV   G  V+++ L    T   +  FE    V   + H   V     + A  EK+LV DY
Sbjct: 379 AVLEDGNEVAVKRLKDAVTVAGKKEFEQQMEVLGRLRHTNLVSLKAYYFAREEKLLVYDY 438

Query: 76  KP 77
            P
Sbjct: 439 MP 440


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.136    0.391 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,886,999
Number of Sequences: 539616
Number of extensions: 957328
Number of successful extensions: 2555
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2545
Number of HSP's gapped (non-prelim): 11
length of query: 82
length of database: 191,569,459
effective HSP length: 53
effective length of query: 29
effective length of database: 162,969,811
effective search space: 4726124519
effective search space used: 4726124519
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)