Query 034819
Match_columns 82
No_of_seqs 107 out of 350
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 10:50:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034819.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034819hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yop_A KTI11P; zinc finger, me 100.0 2.6E-32 9E-37 174.9 4.5 80 2-81 4-83 (83)
2 2jr7_A DPH3 homolog; DESR1, CS 99.9 2.5E-28 8.4E-33 158.3 6.6 66 2-67 4-69 (89)
3 1wge_A Hypothetical protein 26 99.9 5.9E-28 2E-32 154.7 6.0 66 2-67 11-76 (83)
4 2l6l_A DNAJ homolog subfamily 99.7 1.8E-17 6E-22 112.7 6.5 56 3-59 94-149 (155)
5 2e2z_A TIM15; protein import, 95.3 0.018 6E-07 37.6 3.6 39 17-55 9-50 (100)
6 1wee_A PHD finger family prote 87.3 0.51 1.8E-05 27.7 3.0 34 15-55 10-43 (72)
7 4ayb_P DNA-directed RNA polyme 80.9 0.24 8.3E-06 28.4 -0.5 31 21-54 3-34 (48)
8 2avu_E Flagellar transcription 72.1 1.3 4.3E-05 31.5 1.1 31 17-50 130-161 (192)
9 3a43_A HYPD, hydrogenase nicke 70.1 1.4 4.8E-05 29.2 0.9 37 20-56 69-121 (139)
10 3na7_A HP0958; flagellar bioge 68.4 2.6 8.9E-05 29.9 2.1 37 25-64 200-240 (256)
11 3lqh_A Histone-lysine N-methyl 66.5 3.1 0.00011 28.9 2.1 32 23-58 4-36 (183)
12 1wg2_A Zinc finger (AN1-like) 65.6 2.3 7.9E-05 25.4 1.2 13 21-33 29-41 (64)
13 3o70_A PHD finger protein 13; 65.4 5 0.00017 23.4 2.6 26 22-55 20-45 (68)
14 2k16_A Transcription initiatio 65.2 7.7 0.00026 22.4 3.5 28 20-55 17-45 (75)
15 1wfh_A Zinc finger (AN1-like) 64.8 2.4 8.2E-05 25.4 1.1 13 21-33 29-41 (64)
16 1wff_A Riken cDNA 2810002D23 p 64.0 2.6 8.9E-05 26.5 1.2 19 21-39 40-58 (85)
17 2kdx_A HYPA, hydrogenase/ureas 63.2 1.9 6.6E-05 27.4 0.5 29 20-55 72-103 (119)
18 3uk3_C Zinc finger protein 217 62.7 4.3 0.00015 20.7 1.8 31 21-52 4-41 (57)
19 2d9k_A FLN29 gene product; zin 61.8 6 0.00021 22.5 2.5 35 18-54 14-54 (75)
20 2emh_A Zinc finger protein 484 61.7 3.2 0.00011 20.5 1.1 28 21-49 12-46 (46)
21 1wep_A PHF8; structural genomi 61.1 7.2 0.00025 23.0 2.8 28 21-55 12-39 (79)
22 2lcq_A Putative toxin VAPC6; P 60.9 1.8 6E-05 28.7 0.0 32 16-54 127-159 (165)
23 2ema_A Zinc finger protein 347 60.9 3.7 0.00013 20.2 1.3 28 21-49 12-46 (46)
24 2eq0_A Zinc finger protein 347 60.8 3.8 0.00013 20.2 1.3 29 20-49 11-46 (46)
25 1wfp_A Zinc finger (AN1-like) 60.7 3.2 0.00011 25.5 1.2 12 21-32 39-50 (74)
26 2emf_A Zinc finger protein 484 60.3 3.7 0.00013 20.3 1.2 28 21-49 12-46 (46)
27 1wfl_A Zinc finger protein 216 59.7 3.4 0.00012 25.3 1.2 13 20-32 38-50 (74)
28 2emy_A Zinc finger protein 268 59.6 3.9 0.00013 20.1 1.2 29 20-49 11-46 (46)
29 2ep2_A Zinc finger protein 484 59.5 4 0.00014 20.1 1.3 28 21-49 12-46 (46)
30 3o7a_A PHD finger protein 13 v 59.4 9.6 0.00033 20.7 3.0 25 23-55 6-30 (52)
31 1nui_A DNA primase/helicase; z 58.6 8.2 0.00028 26.8 3.2 32 16-53 9-43 (255)
32 1x4w_A Hypothetical protein FL 58.5 2.2 7.4E-05 25.7 0.1 11 22-32 33-43 (67)
33 2el4_A Zinc finger protein 268 58.1 4.1 0.00014 20.0 1.2 28 21-49 12-46 (46)
34 1bbo_A Human enhancer-binding 58.0 5.5 0.00019 20.2 1.7 30 22-52 2-38 (57)
35 1wem_A Death associated transc 57.8 9.3 0.00032 22.2 2.9 26 22-55 17-42 (76)
36 2en8_A Zinc finger protein 224 57.7 4.2 0.00014 19.9 1.2 28 21-49 12-46 (46)
37 2yso_A ZFP-95, zinc finger pro 57.4 4.8 0.00016 19.8 1.4 28 21-49 12-46 (46)
38 2ytk_A Zinc finger protein 347 57.1 4 0.00014 20.1 1.0 28 21-49 12-46 (46)
39 2em9_A Zinc finger protein 224 56.9 4.6 0.00016 19.7 1.2 28 21-49 12-46 (46)
40 2epw_A Zinc finger protein 268 56.7 4 0.00014 20.0 1.0 28 21-49 12-46 (46)
41 2lv2_A Insulinoma-associated p 56.4 6.5 0.00022 23.3 2.1 31 21-52 28-65 (85)
42 2eod_A TNF receptor-associated 56.2 11 0.00038 20.0 2.9 31 20-52 9-46 (66)
43 2eop_A Zinc finger protein 268 56.0 3.9 0.00013 20.1 0.8 28 21-49 12-46 (46)
44 2eoo_A ZFP-95, zinc finger pro 55.9 3.8 0.00013 20.2 0.8 28 21-49 12-46 (46)
45 2ytn_A Zinc finger protein 347 55.7 4 0.00014 20.1 0.9 28 21-49 12-46 (46)
46 2em8_A Zinc finger protein 224 55.5 5.7 0.00019 19.5 1.5 28 21-49 12-46 (46)
47 2emx_A Zinc finger protein 268 54.9 4.8 0.00016 19.6 1.1 28 21-49 10-44 (44)
48 4gzn_C ZFP-57, zinc finger pro 54.9 8.3 0.00028 21.4 2.2 29 22-51 5-40 (60)
49 2em5_A ZFP-95, zinc finger pro 54.9 5.1 0.00017 19.7 1.2 28 21-49 12-46 (46)
50 2ytj_A Zinc finger protein 484 54.6 5 0.00017 19.7 1.1 28 21-49 12-46 (46)
51 1we9_A PHD finger family prote 54.4 11 0.00038 21.0 2.7 26 23-55 8-34 (64)
52 2enc_A Zinc finger protein 224 54.4 5.3 0.00018 19.6 1.2 28 21-49 12-46 (46)
53 2emp_A Zinc finger protein 347 53.9 5.6 0.00019 19.5 1.3 28 21-49 12-46 (46)
54 2ene_A Zinc finger protein 347 53.6 6 0.0002 19.4 1.3 28 21-49 12-46 (46)
55 2em7_A Zinc finger protein 224 53.5 5.4 0.00019 19.5 1.2 28 21-49 12-46 (46)
56 2adr_A ADR1; transcription reg 53.1 7.4 0.00025 20.0 1.7 30 22-52 3-39 (60)
57 2yu8_A Zinc finger protein 347 53.0 4.9 0.00017 19.7 1.0 28 21-49 12-46 (46)
58 1twf_L ABC10-alpha, DNA-direct 52.7 2.3 8E-05 25.5 -0.4 30 18-53 25-55 (70)
59 2emk_A Zinc finger protein 28 52.1 4.4 0.00015 20.0 0.7 28 21-49 12-46 (46)
60 2vpb_A Hpygo1, pygopus homolog 51.9 13 0.00044 21.5 2.8 28 21-55 8-37 (65)
61 2ytd_A Zinc finger protein 473 51.6 5.9 0.0002 19.4 1.1 28 21-49 12-46 (46)
62 2eml_A Zinc finger protein 28 51.5 6.3 0.00021 19.3 1.2 28 21-49 12-46 (46)
63 2epz_A Zinc finger protein 28 51.4 5.3 0.00018 19.6 0.9 28 21-49 12-46 (46)
64 1rik_A E6APC1 peptide; E6-bind 51.3 6.3 0.00022 16.9 1.1 11 22-32 3-14 (29)
65 2eme_A Zinc finger protein 473 51.2 6.4 0.00022 19.2 1.2 28 21-49 12-46 (46)
66 3kqi_A GRC5, PHD finger protei 51.1 11 0.00036 22.0 2.4 29 20-55 9-37 (75)
67 2ytg_A ZFP-95, zinc finger pro 51.1 6.3 0.00022 19.3 1.2 28 21-49 12-46 (46)
68 2kvf_A Zinc finger and BTB dom 50.7 6.8 0.00023 16.8 1.2 10 22-31 4-14 (28)
69 2kvh_A Zinc finger and BTB dom 50.7 6.6 0.00022 16.8 1.1 10 22-31 4-14 (27)
70 2m0d_A Zinc finger and BTB dom 50.6 7.1 0.00024 16.6 1.2 10 22-31 4-14 (30)
71 2m0f_A Zinc finger and BTB dom 50.4 6.9 0.00024 16.6 1.2 10 22-31 3-13 (29)
72 2lce_A B-cell lymphoma 6 prote 50.3 8.2 0.00028 20.9 1.7 33 19-52 15-54 (74)
73 1ard_A Yeast transcription fac 49.9 5.3 0.00018 17.1 0.7 10 22-31 3-13 (29)
74 2eov_A Zinc finger protein 484 49.5 5.1 0.00018 19.6 0.7 28 21-49 12-46 (46)
75 2elz_A Zinc finger protein 224 49.4 5.8 0.0002 19.5 0.9 28 21-49 12-46 (46)
76 2emm_A ZFP-95, zinc finger pro 49.1 5.3 0.00018 19.5 0.7 17 21-38 12-29 (46)
77 2eoq_A Zinc finger protein 224 48.3 4.7 0.00016 19.8 0.4 28 21-49 12-46 (46)
78 2en1_A Zinc finger protein 224 48.1 4.9 0.00017 19.7 0.5 28 21-49 12-46 (46)
79 2lv9_A Histone-lysine N-methyl 48.1 15 0.00052 22.6 2.8 27 22-56 29-55 (98)
80 2ri7_A Nucleosome-remodeling f 48.1 11 0.00039 24.7 2.4 28 22-56 9-36 (174)
81 1x5w_A Zinc finger protein 64, 48.0 11 0.00039 20.0 2.0 33 20-53 8-47 (70)
82 2epr_A POZ-, at HOOK-, and zin 47.5 5.6 0.00019 19.9 0.6 30 20-50 11-47 (48)
83 1x6e_A Zinc finger protein 24; 47.1 13 0.00046 19.9 2.2 31 21-52 14-51 (72)
84 2ytr_A Zinc finger protein 347 47.0 5.2 0.00018 19.6 0.4 28 21-49 12-46 (46)
85 2eq4_A Zinc finger protein 224 46.8 5.1 0.00017 19.6 0.4 28 21-49 12-46 (46)
86 2m0e_A Zinc finger and BTB dom 46.7 5.9 0.0002 16.8 0.6 10 22-31 3-13 (29)
87 2drp_A Protein (tramtrack DNA- 46.6 14 0.00049 19.2 2.3 31 21-52 10-49 (66)
88 1znf_A 31ST zinc finger from X 46.3 6.3 0.00021 16.6 0.6 10 22-31 2-12 (27)
89 1vd4_A Transcription initiatio 46.3 10 0.00034 20.3 1.6 33 20-53 13-49 (62)
90 1vfy_A Phosphatidylinositol-3- 46.1 7.9 0.00027 22.6 1.2 10 21-30 27-37 (73)
91 2lvu_A Zinc finger and BTB dom 51.9 4.3 0.00015 17.3 0.0 10 22-31 3-13 (26)
92 2ep3_A Zinc finger protein 484 45.7 9.8 0.00034 18.5 1.4 17 21-38 12-29 (46)
93 3h0g_L DNA-directed RNA polyme 45.0 4.9 0.00017 23.8 0.2 30 19-54 19-49 (63)
94 1vq8_Z 50S ribosomal protein L 45.0 15 0.00052 22.5 2.4 28 21-53 27-55 (83)
95 2elx_A Zinc finger protein 406 44.9 9.2 0.00031 17.2 1.2 16 21-37 7-23 (35)
96 2gmg_A Hypothetical protein PF 44.8 4.1 0.00014 26.4 -0.2 25 19-49 65-90 (105)
97 2em0_A Zinc finger protein 224 44.7 5.9 0.0002 19.4 0.4 28 21-49 12-46 (46)
98 2kvg_A Zinc finger and BTB dom 44.6 5.6 0.00019 17.2 0.3 10 22-31 4-14 (27)
99 2yw8_A RUN and FYVE domain-con 44.4 8.6 0.00029 22.9 1.2 10 21-30 35-45 (82)
100 2en6_A Zinc finger protein 268 44.1 5.6 0.00019 19.5 0.3 28 21-49 12-46 (46)
101 2ep0_A Zinc finger protein 28 44.0 10 0.00034 18.5 1.3 28 21-49 12-46 (46)
102 2kmk_A Zinc finger protein GFI 43.6 16 0.00055 19.5 2.2 30 21-51 29-65 (82)
103 2ytq_A Zinc finger protein 268 43.6 7.3 0.00025 19.1 0.7 28 21-49 12-46 (46)
104 2ysp_A Zinc finger protein 224 43.6 5.7 0.00019 19.5 0.3 28 21-49 12-46 (46)
105 2el6_A Zinc finger protein 268 43.2 9.8 0.00034 18.6 1.2 28 21-49 12-46 (46)
106 1klr_A Zinc finger Y-chromosom 43.0 6.7 0.00023 16.7 0.5 10 22-31 3-13 (30)
107 1x4u_A Zinc finger, FYVE domai 43.0 9.1 0.00031 22.8 1.2 9 21-29 30-39 (84)
108 1llm_C Chimera of ZIF23-GCN4; 42.9 18 0.0006 20.1 2.4 29 22-51 4-39 (88)
109 2ely_A Zinc finger protein 224 42.6 6.1 0.00021 19.4 0.3 28 21-49 12-46 (46)
110 2elm_A Zinc finger protein 406 41.8 12 0.0004 17.5 1.3 11 21-31 9-20 (37)
111 1paa_A Yeast transcription fac 41.6 7.8 0.00027 16.7 0.6 10 22-31 3-13 (30)
112 2els_A Zinc finger protein 406 41.6 11 0.00039 17.2 1.2 11 21-31 9-20 (36)
113 3a1b_A DNA (cytosine-5)-methyl 41.3 12 0.00042 25.7 1.7 30 11-53 71-103 (159)
114 2elt_A Zinc finger protein 406 41.1 11 0.00038 17.1 1.1 11 21-31 9-20 (36)
115 1joc_A EEA1, early endosomal a 40.7 10 0.00035 24.4 1.2 10 21-30 85-95 (125)
116 1srk_A Zinc finger protein ZFP 40.0 12 0.00042 16.9 1.2 11 21-31 7-18 (35)
117 1f2i_G Fusion of N-terminal 17 39.9 18 0.00063 19.2 2.1 32 20-52 18-58 (73)
118 2eoe_A Zinc finger protein 347 39.7 5.1 0.00017 19.6 -0.3 28 21-49 12-46 (46)
119 2ytm_A Zinc finger protein 28 39.7 7.1 0.00024 19.2 0.3 28 21-49 12-46 (46)
120 1z2q_A LM5-1; membrane protein 39.7 11 0.00038 22.5 1.2 10 21-30 37-47 (84)
121 2elq_A Zinc finger protein 406 39.7 12 0.00041 17.1 1.1 11 21-31 9-20 (36)
122 1p7a_A BF3, BKLF, kruppel-like 39.6 9.6 0.00033 17.5 0.7 11 21-31 11-22 (37)
123 2lvt_A Zinc finger and BTB dom 45.8 6.2 0.00021 17.1 0.0 10 22-31 3-13 (29)
124 2elv_A Zinc finger protein 406 39.5 12 0.00043 17.0 1.2 11 21-31 9-20 (36)
125 2fiy_A Protein FDHE homolog; F 39.1 28 0.00097 25.8 3.6 21 39-59 249-269 (309)
126 1wii_A Hypothetical UPF0222 pr 38.8 17 0.00058 22.4 1.9 35 21-56 23-60 (85)
127 1wil_A KIAA1045 protein; ring 38.1 7.3 0.00025 24.7 0.2 13 20-32 28-41 (89)
128 2dlq_A GLI-kruppel family memb 37.7 19 0.00066 20.8 2.0 30 21-51 66-102 (124)
129 2elr_A Zinc finger protein 406 37.6 10 0.00036 17.1 0.7 11 21-31 9-20 (36)
130 1dvp_A HRS, hepatocyte growth 37.4 12 0.00041 25.8 1.2 9 21-29 177-186 (220)
131 1i7f_A Heat shock protein 33; 37.4 7.3 0.00025 28.7 0.1 49 18-68 224-283 (292)
132 2em2_A Zinc finger protein 28 37.1 14 0.00046 18.0 1.1 17 21-38 12-29 (46)
133 2elp_A Zinc finger protein 406 36.8 14 0.00048 16.9 1.1 12 21-32 9-21 (37)
134 3t7l_A Zinc finger FYVE domain 36.6 13 0.00046 22.5 1.2 10 21-30 36-46 (90)
135 1y02_A CARP2, FYVE-ring finger 36.1 13 0.00046 24.1 1.2 11 21-31 35-46 (120)
136 1wfk_A Zinc finger, FYVE domai 35.9 14 0.00046 22.5 1.2 10 21-30 25-35 (88)
137 3zyq_A Hepatocyte growth facto 35.6 13 0.00045 25.9 1.2 8 21-28 180-188 (226)
138 1kig_L Factor XA; glycoprotein 34.8 20 0.00069 19.2 1.7 15 21-35 18-32 (51)
139 1njq_A Superman protein; zinc- 34.5 17 0.00058 16.9 1.2 16 21-37 6-22 (39)
140 2lvr_A Zinc finger and BTB dom 40.3 8.6 0.00029 16.5 0.0 10 22-31 4-14 (30)
141 2xb1_A Pygopus homolog 2, B-ce 33.6 34 0.0011 21.3 2.8 27 22-55 4-32 (105)
142 2k5c_A Uncharacterized protein 33.3 14 0.00047 23.5 0.9 14 18-31 48-62 (95)
143 2dmd_A Zinc finger protein 64, 33.0 33 0.0011 18.9 2.5 31 21-52 36-73 (96)
144 2ytt_A Zinc finger protein 473 32.7 7.6 0.00026 19.0 -0.3 17 21-38 12-29 (46)
145 2kfq_A FP1; protein, de novo p 32.4 9.6 0.00033 17.3 0.0 10 22-31 3-13 (32)
146 2epc_A Zinc finger protein 32; 31.9 19 0.00065 16.9 1.2 17 21-38 11-28 (42)
147 3mpx_A FYVE, rhogef and PH dom 31.6 9.9 0.00034 28.0 0.0 29 23-51 377-407 (434)
148 1twf_I B12.6, DNA-directed RNA 31.5 28 0.00097 22.2 2.2 32 22-54 5-37 (122)
149 1a1h_A QGSR zinc finger peptid 31.2 35 0.0012 18.5 2.4 8 43-50 62-69 (90)
150 2en2_A B-cell lymphoma 6 prote 31.2 21 0.00071 16.8 1.2 16 21-37 11-27 (42)
151 2d9h_A Zinc finger protein 692 31.1 23 0.00079 19.1 1.5 32 21-53 7-48 (78)
152 2el5_A Zinc finger protein 268 31.0 20 0.00069 16.8 1.2 17 21-38 10-27 (42)
153 2ept_A Zinc finger protein 32; 31.0 20 0.00069 16.8 1.2 17 21-38 10-27 (41)
154 2cot_A Zinc finger protein 435 30.5 23 0.0008 19.1 1.5 31 21-52 18-55 (77)
155 3j20_Y 30S ribosomal protein S 30.4 43 0.0015 18.4 2.6 28 20-53 18-47 (50)
156 2emi_A Zinc finger protein 484 30.0 21 0.00073 17.2 1.2 18 20-38 11-29 (46)
157 1vq0_A 33 kDa chaperonin; TM13 29.6 25 0.00085 26.0 1.9 45 18-65 237-292 (302)
158 2epq_A POZ-, at HOOK-, and zin 29.6 11 0.00038 18.3 -0.0 28 21-49 10-44 (45)
159 2epv_A Zinc finger protein 268 29.5 22 0.00075 17.1 1.2 16 21-37 12-28 (44)
160 1rim_A E6APC2 peptide; E6-bind 29.4 15 0.00053 16.7 0.5 10 22-31 3-13 (33)
161 2i5o_A DNA polymerase ETA; zin 29.3 30 0.001 18.3 1.7 13 21-33 9-22 (39)
162 2bz6_L Blood coagulation facto 29.3 20 0.00069 19.4 1.0 15 21-35 20-34 (53)
163 2csh_A Zinc finger protein 297 29.2 31 0.0011 19.7 1.9 31 21-52 37-74 (110)
164 1ltl_A DNA replication initiat 29.2 23 0.00077 25.3 1.6 33 19-52 132-165 (279)
165 2jkh_L Factor X light chain; p 29.1 20 0.00069 19.4 1.0 15 21-35 21-35 (55)
166 2ytb_A Zinc finger protein 32; 29.0 18 0.00061 17.0 0.7 17 21-38 11-28 (42)
167 1vzy_A 33 kDa chaperonin; chap 29.0 22 0.00074 26.0 1.5 45 18-64 229-284 (291)
168 2elo_A Zinc finger protein 406 28.7 10 0.00035 17.4 -0.2 11 21-31 9-20 (37)
169 2emb_A Zinc finger protein 473 28.4 24 0.00083 16.8 1.2 16 21-37 12-28 (44)
170 2eos_A B-cell lymphoma 6 prote 28.2 18 0.00063 17.0 0.7 17 21-38 11-28 (42)
171 1pft_A TFIIB, PFTFIIBN; N-term 28.1 22 0.00076 18.9 1.1 28 21-53 5-34 (50)
172 2e72_A POGO transposable eleme 28.0 13 0.00046 21.1 0.1 17 20-36 11-28 (49)
173 2pv0_B DNA (cytosine-5)-methyl 28.0 21 0.00073 27.6 1.3 28 10-50 84-114 (386)
174 2eor_A Zinc finger protein 224 27.8 25 0.00087 16.8 1.2 17 21-38 12-29 (46)
175 2yt9_A Zinc finger-containing 27.7 31 0.0011 19.0 1.7 10 22-31 36-46 (95)
176 2eow_A Zinc finger protein 347 27.7 25 0.00086 16.8 1.2 17 21-38 12-29 (46)
177 2yts_A Zinc finger protein 484 27.3 25 0.00087 16.8 1.2 18 20-38 11-29 (46)
178 2rsd_A E3 SUMO-protein ligase 27.2 59 0.002 18.4 2.9 26 22-55 11-38 (68)
179 2yu5_A Zinc finger protein 473 27.1 25 0.00086 16.7 1.1 12 21-32 12-24 (44)
180 2eoy_A Zinc finger protein 473 27.1 26 0.00088 16.9 1.2 12 21-32 12-24 (46)
181 2eof_A Zinc finger protein 268 27.0 27 0.00092 16.5 1.2 17 21-38 12-29 (44)
182 2em3_A Zinc finger protein 28 27.0 26 0.00089 16.8 1.2 17 21-38 12-29 (46)
183 3kv5_D JMJC domain-containing 26.8 35 0.0012 26.7 2.4 27 22-55 38-64 (488)
184 2ytp_A Zinc finger protein 484 26.7 26 0.0009 16.9 1.2 18 20-38 11-29 (46)
185 3iuf_A Zinc finger protein UBI 26.7 27 0.00092 17.4 1.2 11 21-31 7-18 (48)
186 2yte_A Zinc finger protein 473 26.6 20 0.0007 16.7 0.7 17 21-38 10-27 (42)
187 1yui_A GAGA-factor; complex (D 26.6 27 0.00092 17.7 1.2 12 20-31 23-35 (54)
188 2ytf_A Zinc finger protein 268 26.6 27 0.00091 16.7 1.2 18 20-38 11-29 (46)
189 2emj_A Zinc finger protein 28 26.6 26 0.00088 16.9 1.1 17 21-38 12-29 (46)
190 2em4_A Zinc finger protein 28 26.4 27 0.00092 16.8 1.2 17 21-38 12-29 (46)
191 2i13_A AART; DNA binding, zinc 26.3 43 0.0015 21.1 2.4 10 22-31 106-116 (190)
192 1x6h_A Transcriptional repress 26.2 30 0.001 18.6 1.4 31 21-52 15-56 (86)
193 2en3_A ZFP-95, zinc finger pro 25.5 29 0.00098 16.7 1.2 12 21-32 12-24 (46)
194 2jp9_A Wilms tumor 1; DNA bind 25.3 50 0.0017 18.8 2.4 10 42-51 65-74 (119)
195 2yrj_A Zinc finger protein 473 25.2 29 0.001 16.6 1.2 18 20-38 11-29 (46)
196 1d4u_A Nucleotide excision rep 25.0 19 0.00063 23.3 0.4 27 23-51 7-34 (111)
197 2wbs_A Krueppel-like factor 4; 25.0 51 0.0018 17.7 2.3 30 21-51 35-73 (89)
198 1apq_A Complement protease C1R 24.9 24 0.00081 18.3 0.8 14 21-34 32-45 (53)
199 2enf_A Zinc finger protein 347 24.5 23 0.00078 17.1 0.6 17 21-38 12-29 (46)
200 2en7_A Zinc finger protein 268 24.4 20 0.0007 16.9 0.4 16 21-37 12-28 (44)
201 1x3z_A Peptide: N-glycanase; h 24.1 59 0.002 24.7 3.1 34 22-55 120-167 (335)
202 2vnf_A ING 4, P29ING4, inhibit 24.1 81 0.0028 17.5 3.1 34 10-55 2-38 (60)
203 2lbm_A Transcriptional regulat 24.0 38 0.0013 22.6 1.8 16 40-55 72-87 (142)
204 2wph_E Coagulation factor IXA 23.9 23 0.00078 19.7 0.6 15 21-35 20-34 (59)
205 2yto_A Zinc finger protein 484 23.7 32 0.0011 16.5 1.2 17 21-38 12-29 (46)
206 2pk7_A Uncharacterized protein 23.5 88 0.003 18.2 3.2 31 23-58 10-41 (69)
207 1kli_L Factor VIIA; extrinsic 23.4 29 0.00099 20.0 1.0 15 21-35 26-40 (69)
208 2js4_A UPF0434 protein BB2007; 23.4 96 0.0033 18.1 3.4 32 22-58 9-41 (70)
209 1wew_A DNA-binding family prot 23.4 73 0.0025 18.4 2.9 28 20-55 15-44 (78)
210 1v54_F VI, cytochrome C oxidas 23.2 27 0.00093 22.0 0.9 17 21-37 79-96 (98)
211 2eou_A Zinc finger protein 473 23.2 24 0.00082 16.9 0.6 16 21-37 12-28 (44)
212 2hf1_A Tetraacyldisaccharide-1 23.2 90 0.0031 18.1 3.2 33 21-58 8-41 (68)
213 1bhi_A CRE-BP1, ATF-2; CRE bin 22.9 37 0.0013 15.4 1.2 16 21-37 6-24 (38)
214 2k4x_A 30S ribosomal protein S 22.9 43 0.0015 18.7 1.7 28 21-53 18-46 (55)
215 3ql9_A Transcriptional regulat 22.7 49 0.0017 21.7 2.2 33 10-55 48-81 (129)
216 1va1_A Transcription factor SP 22.7 38 0.0013 15.5 1.3 11 21-31 8-21 (37)
217 2enh_A Zinc finger protein 28 22.5 27 0.00092 16.8 0.7 16 21-37 12-28 (46)
218 4e2x_A TCAB9; kijanose, tetron 22.3 55 0.0019 23.6 2.6 13 42-54 52-64 (416)
219 2yth_A Zinc finger protein 224 22.3 28 0.00094 16.8 0.7 17 21-38 12-29 (46)
220 2ee8_A Protein ODD-skipped-rel 22.1 32 0.0011 19.4 1.1 10 22-31 18-28 (106)
221 3tbo_A Zinc finger, CDGSH-type 22.0 46 0.0016 19.4 1.7 10 18-28 20-29 (60)
222 3kv4_A PHD finger protein 8; e 21.9 46 0.0016 25.9 2.2 28 21-55 5-32 (447)
223 2eoz_A Zinc finger protein 473 21.7 23 0.00078 17.1 0.3 17 21-38 12-29 (46)
224 2emg_A Zinc finger protein 484 21.7 29 0.00098 16.6 0.7 17 21-38 12-29 (46)
225 2em6_A Zinc finger protein 224 21.5 28 0.00096 16.8 0.6 18 20-38 11-29 (46)
226 2lt7_A Transcriptional regulat 21.5 70 0.0024 19.8 2.7 30 20-50 21-57 (133)
227 2en9_A Zinc finger protein 28 21.3 29 0.001 16.7 0.7 17 21-38 12-29 (46)
228 2yrm_A B-cell lymphoma 6 prote 21.3 30 0.001 16.5 0.7 16 21-37 10-26 (43)
229 2epx_A Zinc finger protein 28 21.3 30 0.001 16.5 0.7 16 21-37 12-28 (47)
230 2yti_A Zinc finger protein 347 21.1 23 0.00078 17.0 0.2 17 21-38 12-29 (46)
231 2eq1_A Zinc finger protein 347 21.0 28 0.00095 16.7 0.5 18 20-38 11-29 (46)
232 2ent_A Krueppel-like factor 15 21.0 43 0.0015 16.0 1.3 28 21-49 12-48 (48)
233 2g6q_A Inhibitor of growth pro 20.9 1E+02 0.0035 17.3 3.1 33 11-55 4-39 (62)
234 2eox_A Zinc finger protein 473 20.7 25 0.00085 16.7 0.3 12 21-32 12-24 (44)
235 2ep1_A Zinc finger protein 484 20.5 26 0.0009 16.7 0.4 17 21-38 12-29 (46)
236 1zfd_A SWI5; DNA binding motif 20.3 35 0.0012 14.7 0.8 10 22-31 4-16 (32)
237 2jr6_A UPF0434 protein NMA0874 20.2 1E+02 0.0036 17.8 3.1 32 22-58 9-41 (68)
238 1x0g_A ISCA; [2Fe-2S], biosynt 20.0 29 0.00099 21.4 0.6 13 22-34 99-111 (112)
No 1
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=99.97 E-value=2.6e-32 Score=174.91 Aligned_cols=80 Identities=45% Similarity=0.893 Sum_probs=74.1
Q ss_pred ccceeecCCceeccCCceEEEeCCCCCceeeehhhhhcCceEEEcCCCcceEEEEeeccccccccccccCCCCCCCceee
Q 034819 2 SYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKDELRIGEEIARCPSCSLYITVIYNIEDFLDNKSKEKLEPSKQQPVAV 81 (82)
Q Consensus 2 ~~d~v~LdDm~~~e~~~~y~y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~~~~~~~~e~~~~~~~~~~~~~~~~~ 81 (82)
+|++|+|+||+|+++++.|+|+|||||.|.|++++|++|+.+++|+||||||||+|+.+++++.....+.++++|++|+|
T Consensus 4 ~~dev~leDm~~de~~~~y~ypCrCGd~F~it~edL~~ge~iv~C~sCSL~I~V~~~~~d~~~~~~~~~~~~~~~~~~~~ 83 (83)
T 1yop_A 4 TYDEIEIEDMTFEPENQMFTYPCPCGDRFQIYLDDMFEGEKVAVCPSCSLMIDVVFDKEDLAEYYEEAGIHPPEPIAAAA 83 (83)
T ss_dssp CSBCCBGGGSEEETTTTEEEEEETTTEEEEEEHHHHHTTCCEEECSSSCCEEECBCCSSHHHHHHHHSCCCCSSCCCCCC
T ss_pred eeeEEEHHHcEEcCCCCEEEEeCCCCCeEEECHHHHhCCCEEEECCCCccEEEEEEccccccccccccccCccccccccC
Confidence 58999999999999999999999999999999999999999999999999999999999998877777777778777765
No 2
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=99.95 E-value=2.5e-28 Score=158.26 Aligned_cols=66 Identities=52% Similarity=1.077 Sum_probs=62.4
Q ss_pred ccceeecCCceeccCCceEEEeCCCCCceeeehhhhhcCceEEEcCCCcceEEEEeeccccccccc
Q 034819 2 SYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKDELRIGEEIARCPSCSLYITVIYNIEDFLDNKS 67 (82)
Q Consensus 2 ~~d~v~LdDm~~~e~~~~y~y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~~~~~~~~e~~~ 67 (82)
+|++|+|+||+|+++++.|+|+|||||.|.|++++|++|+.+++|+||||||||+|+.+++.++..
T Consensus 4 vydeV~LeDm~~de~~~~y~ypCrCGd~F~IteedLe~ge~iv~C~sCSL~IkV~y~~~~~~~~~~ 69 (89)
T 2jr7_A 4 FHDEVEIEDFQYDEDSETYFYPCPCGDNFSITKEDLENGEDVATCPSCSLIIKVIYDKDQFVSGET 69 (89)
T ss_dssp CSCEEETTTSEEETTTTEEEEECTTSSEEEEEHHHHHHTCCEEECTTTCCEEEEECCHHHHCCSSC
T ss_pred ceeEEEHHHcEEcCCCCEEEEcCCCCCEEEECHHHHhCCCEEEECCCCccEEEEEEcccccccccc
Confidence 699999999999999999999999999999999999999999999999999999999999876543
No 3
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=99.94 E-value=5.9e-28 Score=154.68 Aligned_cols=66 Identities=52% Similarity=1.061 Sum_probs=62.2
Q ss_pred ccceeecCCceeccCCceEEEeCCCCCceeeehhhhhcCceEEEcCCCcceEEEEeeccccccccc
Q 034819 2 SYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKDELRIGEEIARCPSCSLYITVIYNIEDFLDNKS 67 (82)
Q Consensus 2 ~~d~v~LdDm~~~e~~~~y~y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~~~~~~~~e~~~ 67 (82)
+|++|+|+||+|+++++.|+|+|||||.|.|++++|++|+.+++|++|||||||+|+.+++.+...
T Consensus 11 ~~dev~LeDm~~de~~~~y~y~CrCGd~F~it~edL~~ge~iv~C~sCSL~I~V~~~~~~~~~~~~ 76 (83)
T 1wge_A 11 FHDEVEIEDFQYDEDSETYFYPCPCGDNFAITKEDLENGEDVATCPSCSLIIKVIYDKDQFMCGET 76 (83)
T ss_dssp CSCEEEGGGSCCBTTTTEEEECCSSSSCEEEEHHHHHTTCCEEECTTTCCEEEEECCHHHHHTTTC
T ss_pred eeEEEEHHHceEccCCCEEEEeCCCCCEEEECHHHHhCCCEEEECCCCceEEEEEeccccccccce
Confidence 689999999999999999999999999999999999999999999999999999999999876543
No 4
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.70 E-value=1.8e-17 Score=112.73 Aligned_cols=56 Identities=30% Similarity=0.652 Sum_probs=52.1
Q ss_pred cceeecCCceeccCCceEEEeCCCCCceeeehhhhhcCceEEEcCCCcceEEEEeec
Q 034819 3 YDDVEIEDMEWNEELQAYTYPCPCGDLFQITKDELRIGEEIARCPSCSLYITVIYNI 59 (82)
Q Consensus 3 ~d~v~LdDm~~~e~~~~y~y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~~~~ 59 (82)
..++.+++|+|+++...|+++|||||.|.|++++|++| .+++|++|||||+|.|..
T Consensus 94 ~~~~~~~~m~~~e~~~~f~~~CrCG~~f~i~~~~l~~~-~~v~C~sCSl~~~v~~~~ 149 (155)
T 2l6l_A 94 DAQVYLEEMSWNEGDHSFYLSCRCGGKYSVSKDEAEEV-SLISCDTCSLIIELLHYN 149 (155)
T ss_dssp SEEEETTTSEEETTTTEEEEECSSSCEEEEETTHHHHC-CEEECSSSSCEEEEECCC
T ss_pred cceeeHHHhccccCCcEEEEcCCCCCeEEecHHHhCCC-CEEECCCCceEEEEEEcc
Confidence 45788999999999999999999999999999999987 899999999999999864
No 5
>2e2z_A TIM15; protein import, zinc finger, protein transport, chaperone regulator; NMR {Saccharomyces cerevisiae}
Probab=95.27 E-value=0.018 Score=37.60 Aligned_cols=39 Identities=18% Similarity=0.559 Sum_probs=33.7
Q ss_pred CceEEEeCC-CC--CceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 17 LQAYTYPCP-CG--DLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 17 ~~~y~y~CR-CG--g~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
.....|.|. |+ ....|++...+.|.++++|++|.-+=.|
T Consensus 9 ~~~l~FTC~~C~tRs~k~iSk~aY~~GvViv~C~gC~n~HlI 50 (100)
T 2e2z_A 9 KMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLI 50 (100)
T ss_dssp EEEEEEEETTTTEEEEEEEEHHHHHTSEEEEECTTTCCEEES
T ss_pred cEEEEEEccCCCCcchhhcCHHHhhCCEEEEEcCCCccceEe
Confidence 356789995 99 5899999999999999999999987555
No 6
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=87.35 E-value=0.51 Score=27.72 Aligned_cols=34 Identities=21% Similarity=0.594 Sum_probs=24.5
Q ss_pred cCCceEEEeCCCCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 15 EELQAYTYPCPCGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 15 e~~~~y~y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
.++......|.||..+ ..|...++|+.|.-|.+.
T Consensus 10 ~~~~~~~~~C~C~~~~-------~~g~~mI~Cd~C~~W~H~ 43 (72)
T 1wee_A 10 RGVDNWKVDCKCGTKD-------DDGERMLACDGCGVWHHT 43 (72)
T ss_dssp CSSCSSEECCTTCCCS-------CCSSCEEECSSSCEEEET
T ss_pred CCCCCcceEeeCCCcc-------CCCCcEEECCCCCCccCC
Confidence 3334566789999753 235678999999988775
No 7
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=80.91 E-value=0.24 Score=28.37 Aligned_cols=31 Identities=32% Similarity=0.715 Sum_probs=19.8
Q ss_pred EEeC-CCCCceeeehhhhhcCceEEEcCCCcceEE
Q 034819 21 TYPC-PCGDLFQITKDELRIGEEIARCPSCSLYIT 54 (82)
Q Consensus 21 ~y~C-RCGg~f~i~~~~Le~g~~iv~C~sCSL~I~ 54 (82)
.|.| |||..|.-+ +|+- -.-+.|+-|-..|-
T Consensus 3 iY~C~rCg~~fs~~--el~~-lP~IrCpyCGyrii 34 (48)
T 4ayb_P 3 VYRCGKCWKTFTDE--QLKV-LPGVRCPYCGYKII 34 (48)
T ss_dssp --CCCCTTTTCCCC--CSCC-CSSSCCTTTCCSCE
T ss_pred EEEeeccCCCccHH--HHhh-CCCcccCccCcEEE
Confidence 5789 899988744 4432 23478999987653
No 8
>2avu_E Flagellar transcriptional activator FLHC; C4-type zinc finger, transcription activator; 3.00A {Escherichia coli} SCOP: e.64.1.1
Probab=72.09 E-value=1.3 Score=31.53 Aligned_cols=31 Identities=19% Similarity=0.326 Sum_probs=22.9
Q ss_pred CceEEEeCC-CCCceeeehhhhhcCceEEEcCCCc
Q 034819 17 LQAYTYPCP-CGDLFQITKDELRIGEEIARCPSCS 50 (82)
Q Consensus 17 ~~~y~y~CR-CGg~f~i~~~~Le~g~~iv~C~sCS 50 (82)
+..-.-+|+ ||+.|+..-.++..+ ..|+-|.
T Consensus 130 ~~L~l~~C~~Cgg~fv~~~~~~~~~---f~Cp~C~ 161 (192)
T 2avu_E 130 GLLQLSSCNCCGGNFITHAHQPVGS---FACSLCQ 161 (192)
T ss_dssp TSEEEEECTTTCCEEEEESSCCSSC---CCCTTC-
T ss_pred CceeeCcCCCCCCCeeCccCCCCCC---CcCCCCC
Confidence 445567895 999999998885433 6788887
No 9
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=70.08 E-value=1.4 Score=29.15 Aligned_cols=37 Identities=24% Similarity=0.662 Sum_probs=23.9
Q ss_pred EEEeCC-CCCceeeeh--hhhhcC--ce----------EEEcCCC-cceEEEE
Q 034819 20 YTYPCP-CGDLFQITK--DELRIG--EE----------IARCPSC-SLYITVI 56 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~--~~Le~g--~~----------iv~C~sC-SL~I~V~ 56 (82)
-...|| ||-.|.+.+ ++|.+. +. ...|+.| |..++|.
T Consensus 69 ~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~~~~i~ 121 (139)
T 3a43_A 69 AVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHDFEVV 121 (139)
T ss_dssp CEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCCCEEEE
T ss_pred CcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCCccEEe
Confidence 367797 999888766 233321 22 5689999 5556653
No 10
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=68.41 E-value=2.6 Score=29.91 Aligned_cols=37 Identities=16% Similarity=0.590 Sum_probs=23.3
Q ss_pred CCCCc-eeeehhhhh---cCceEEEcCCCcceEEEEeecccccc
Q 034819 25 PCGDL-FQITKDELR---IGEEIARCPSCSLYITVIYNIEDFLD 64 (82)
Q Consensus 25 RCGg~-f~i~~~~Le---~g~~iv~C~sCSL~I~V~~~~~~~~e 64 (82)
+|||- +.|+...+. .+..++.|+.|. ||+|....+.+
T Consensus 200 ~C~GC~~~lppq~~~~i~~~~~Iv~Cp~Cg---RIL~~~~~~~~ 240 (256)
T 3na7_A 200 ACGGCFIRLNDKIYTEVLTSGDMITCPYCG---RILYAEGAYES 240 (256)
T ss_dssp BCTTTCCBCCHHHHHHHHHSSSCEECTTTC---CEEECSCC---
T ss_pred ccCCCCeeeCHHHHHHHHCCCCEEECCCCC---eeEEeCcchhh
Confidence 58864 556666554 367899999999 45555555555
No 11
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=66.46 E-value=3.1 Score=28.86 Aligned_cols=32 Identities=16% Similarity=0.612 Sum_probs=22.7
Q ss_pred eCC-CCCceeeehhhhhcCceEEEcCCCcceEEEEee
Q 034819 23 PCP-CGDLFQITKDELRIGEEIARCPSCSLYITVIYN 58 (82)
Q Consensus 23 ~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~~~ 58 (82)
.|+ |+..|.-. ++ +...++|+.|.-|++-.-.
T Consensus 4 ~CpiC~k~Y~~~--~~--~~~MIqCd~C~~W~H~~Cv 36 (183)
T 3lqh_A 4 FCPLCDKCYDDD--DY--ESKMMQCGKCDRWVHSKCE 36 (183)
T ss_dssp BCTTTCCBCTTC--CT--TCCEEECTTTCCEEEGGGS
T ss_pred cCCCCcCccCCc--cc--CCCeEECCCCCcccchhcc
Confidence 388 98777622 22 3478999999999986433
No 12
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=65.65 E-value=2.3 Score=25.40 Aligned_cols=13 Identities=31% Similarity=0.851 Sum_probs=10.5
Q ss_pred EEeCCCCCceeee
Q 034819 21 TYPCPCGDLFQIT 33 (82)
Q Consensus 21 ~y~CRCGg~f~i~ 33 (82)
.+.||||+.|-..
T Consensus 29 ~f~CrCg~~FC~~ 41 (64)
T 1wg2_A 29 GFKCKCGSTFCGS 41 (64)
T ss_dssp CEECTTSCEECSS
T ss_pred CeEeecCCEeccc
Confidence 5889999998643
No 13
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=65.41 E-value=5 Score=23.43 Aligned_cols=26 Identities=27% Similarity=0.745 Sum_probs=19.9
Q ss_pred EeCCCCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 22 YPCPCGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 22 y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
..|.||..+ .+...++|+.|.-|.+.
T Consensus 20 ~~CiC~~~~--------~~~~MIqCd~C~~WfH~ 45 (68)
T 3o70_A 20 VTCFCMKPF--------AGRPMIECNECHTWIHL 45 (68)
T ss_dssp CCSTTCCCC--------TTCCEEECTTTCCEEET
T ss_pred eEeECCCcC--------CCCCEEECCCCCccccc
Confidence 458998644 25679999999988775
No 14
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=65.24 E-value=7.7 Score=22.41 Aligned_cols=28 Identities=21% Similarity=0.559 Sum_probs=20.7
Q ss_pred EEEeCC-CCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 20 YTYPCP-CGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
-...|+ ||... .+..++.|++|..|.+.
T Consensus 17 ~~~~C~~C~~~~--------~~~~mi~CD~C~~wfH~ 45 (75)
T 2k16_A 17 QIWICPGCNKPD--------DGSPMIGCDDCDDWYHW 45 (75)
T ss_dssp EEECBTTTTBCC--------SSCCEEECSSSSSEEEH
T ss_pred CCcCCCCCCCCC--------CCCCEEEcCCCCccccc
Confidence 445695 98553 25678999999999776
No 15
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=64.79 E-value=2.4 Score=25.36 Aligned_cols=13 Identities=31% Similarity=0.784 Sum_probs=10.4
Q ss_pred EEeCCCCCceeee
Q 034819 21 TYPCPCGDLFQIT 33 (82)
Q Consensus 21 ~y~CRCGg~f~i~ 33 (82)
.+.||||+.|-..
T Consensus 29 ~f~CrCg~~FC~~ 41 (64)
T 1wfh_A 29 GFMCRCGTTFCGS 41 (64)
T ss_dssp CEECSSSCEECTT
T ss_pred CEEeecCCEeccc
Confidence 5889999988643
No 16
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=64.02 E-value=2.6 Score=26.46 Aligned_cols=19 Identities=21% Similarity=0.620 Sum_probs=13.4
Q ss_pred EEeCCCCCceeeehhhhhc
Q 034819 21 TYPCPCGDLFQITKDELRI 39 (82)
Q Consensus 21 ~y~CRCGg~f~i~~~~Le~ 39 (82)
.+.||||+.|-..=-..++
T Consensus 40 ~f~CrCg~~FC~~HRy~e~ 58 (85)
T 1wff_A 40 SFECRCGNNFCASHRYAEA 58 (85)
T ss_dssp CEECTTCCEECTTTCSTGG
T ss_pred CeEcCCCCEecccCCCccC
Confidence 6899999999754444443
No 17
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=63.18 E-value=1.9 Score=27.37 Aligned_cols=29 Identities=17% Similarity=0.495 Sum_probs=19.9
Q ss_pred EEEeCC-CCCceeeehhhhhcCceEE-EcCCCc-ceEEE
Q 034819 20 YTYPCP-CGDLFQITKDELRIGEEIA-RCPSCS-LYITV 55 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le~g~~iv-~C~sCS-L~I~V 55 (82)
-.+.|+ ||..|.+.. ... .|+.|- -.+++
T Consensus 72 ~~~~C~~CG~~~e~~~-------~~~~~CP~Cgs~~~~i 103 (119)
T 2kdx_A 72 VELECKDCSHVFKPNA-------LDYGVCEKCHSKNVII 103 (119)
T ss_dssp CEEECSSSSCEECSCC-------STTCCCSSSSSCCCEE
T ss_pred ceEEcCCCCCEEeCCC-------CCCCcCccccCCCcEE
Confidence 468898 999998732 245 799994 43444
No 18
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=62.70 E-value=4.3 Score=20.70 Aligned_cols=31 Identities=32% Similarity=0.777 Sum_probs=19.8
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCCcce
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSCSLY 52 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL~ 52 (82)
.|.|+ ||-.|. +...|.. ++....|+.|.-.
T Consensus 4 ~~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~C~~C~~~ 41 (57)
T 3uk3_C 4 SRECSYCGKFFR-SNYYLNIHLRTHTGEKPYKCEFCEYA 41 (57)
T ss_dssp -CBCTTTCCBCS-CHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred CccCCCCcchhC-ChHHHHHHHHHcCCCCCcCCCCCcch
Confidence 47787 988886 3444432 4556788888753
No 19
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.80 E-value=6 Score=22.49 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=25.6
Q ss_pred ceEEEeCC-CCCceeeehhhhhc-----CceEEEcCCCcceEE
Q 034819 18 QAYTYPCP-CGDLFQITKDELRI-----GEEIARCPSCSLYIT 54 (82)
Q Consensus 18 ~~y~y~CR-CGg~f~i~~~~Le~-----g~~iv~C~sCSL~I~ 54 (82)
....+.|+ ||..|. ..+|.. ++..+.|+.|.-.++
T Consensus 14 ~~r~~~C~~C~~~~~--~~~L~~H~~~c~~~~~~C~~C~~~~~ 54 (75)
T 2d9k_A 14 PLRLAVCQHCDLELS--ILKLKEHEDYCGARTELCGNCGRNVL 54 (75)
T ss_dssp CCCCEECSSSCCEEC--HHHHHHHHHHHHHCEEECSSSCCEEE
T ss_pred CCcccCCcccChHhh--HHHHHHHHhHcCCCceEcccCCCcCc
Confidence 34568898 998884 666654 456899999988643
No 20
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.74 E-value=3.2 Score=20.48 Aligned_cols=28 Identities=32% Similarity=0.611 Sum_probs=17.6
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++....|+.|
T Consensus 12 ~~~C~~C~k~F~-~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFT-DRSNLIKHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEES-SHHHHHHHHHHHHCSSCSSSCCC
T ss_pred CcCCCCCCchhC-CHHHHHHHHHhcCCCCCCCCCCC
Confidence 57897 998887 4445542 3445566655
No 21
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=61.07 E-value=7.2 Score=22.97 Aligned_cols=28 Identities=14% Similarity=0.466 Sum_probs=20.5
Q ss_pred EEeCCCCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 21 TYPCPCGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 21 ~y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
...|-||..+. .+...++|+.|.-|.+.
T Consensus 12 ~~~C~C~~~~d-------~~~~MIqCd~C~~WfH~ 39 (79)
T 1wep_A 12 PVYCLCRQPYN-------VNHFMIECGLCQDWFHG 39 (79)
T ss_dssp CCCSTTSCSCC-------SSSCEEEBTTTCCEEEH
T ss_pred ccEEEcCCccC-------CCCceEEcCCCCCcEEe
Confidence 34588987651 24578999999999775
No 22
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=60.90 E-value=1.8 Score=28.66 Aligned_cols=32 Identities=25% Similarity=0.667 Sum_probs=22.7
Q ss_pred CCceEEEeCC-CCCceeeehhhhhcCceEEEcCCCcceEE
Q 034819 16 ELQAYTYPCP-CGDLFQITKDELRIGEEIARCPSCSLYIT 54 (82)
Q Consensus 16 ~~~~y~y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I~ 54 (82)
....|.|.|. ||..|... .....|+.|---++
T Consensus 127 ~~~~~~y~C~~Cg~~~~~~-------~~~~~Cp~CG~~~~ 159 (165)
T 2lcq_A 127 KVIKWRYVCIGCGRKFSTL-------PPGGVCPDCGSKVK 159 (165)
T ss_dssp SCCCCCEEESSSCCEESSC-------CGGGBCTTTCCBEE
T ss_pred ccccEEEECCCCCCcccCC-------CCCCcCCCCCCcce
Confidence 4468999998 99999744 12237999976643
No 23
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=60.86 E-value=3.7 Score=20.22 Aligned_cols=28 Identities=32% Similarity=0.670 Sum_probs=17.6
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ema_A 12 RYKCNECGKVFS-RNSQLSQHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEES-SHHHHHHHHTGGGCCCCCSSSCC
T ss_pred CcCCCCCcchhC-CHHHHHHHHHhcCCCCCCCCCCC
Confidence 57897 998887 4444442 3445566665
No 24
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.83 E-value=3.8 Score=20.18 Aligned_cols=29 Identities=31% Similarity=0.614 Sum_probs=18.1
Q ss_pred EEEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 20 YTYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
-.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 11 k~~~C~~C~k~F~-~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2eq0_A 11 KPYKCHECGKVFR-RNSHLARHQLIHTGEKPSGPSSG 46 (46)
T ss_dssp CCEECTTTCCEES-SHHHHHHHHTTTCCCCCSCCSCC
T ss_pred CCeECCCCCchhC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 357897 998887 4445542 3445566665
No 25
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=60.71 E-value=3.2 Score=25.48 Aligned_cols=12 Identities=33% Similarity=0.872 Sum_probs=10.0
Q ss_pred EEeCCCCCceee
Q 034819 21 TYPCPCGDLFQI 32 (82)
Q Consensus 21 ~y~CRCGg~f~i 32 (82)
.+.||||+.|-.
T Consensus 39 ~f~CrCg~~FCs 50 (74)
T 1wfp_A 39 GFKCRCGSTFCG 50 (74)
T ss_dssp CEECTTSCEECT
T ss_pred ceEeccCCEecc
Confidence 589999998864
No 26
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.27 E-value=3.7 Score=20.26 Aligned_cols=28 Identities=32% Similarity=0.672 Sum_probs=17.6
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~F~-~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFT-RKSTLSMHQKIHTGEKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEES-CHHHHHHHGGGTSCSSCSCCCCC
T ss_pred CeECCCCCchhC-CHHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 998887 4455542 3445566665
No 27
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=59.69 E-value=3.4 Score=25.35 Aligned_cols=13 Identities=38% Similarity=0.933 Sum_probs=10.3
Q ss_pred EEEeCCCCCceee
Q 034819 20 YTYPCPCGDLFQI 32 (82)
Q Consensus 20 y~y~CRCGg~f~i 32 (82)
.-+.||||+.|-.
T Consensus 38 ~gf~CrCg~~FCs 50 (74)
T 1wfl_A 38 TGFDCRCGNLFCG 50 (74)
T ss_dssp GCEECTTSCEECS
T ss_pred cCeecCCCCEech
Confidence 4589999988864
No 28
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.57 E-value=3.9 Score=20.11 Aligned_cols=29 Identities=34% Similarity=0.565 Sum_probs=18.2
Q ss_pred EEEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 20 YTYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
-.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 11 k~~~C~~C~k~F~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emy_A 11 NPYECHECGKAFS-RKYQLISHQRTHAGEKPSGPSSG 46 (46)
T ss_dssp CCEECSSSCCEES-SHHHHHHHHHHHTTSCCSCSSCC
T ss_pred cCcCCCCCCcccC-cHHHHHHHHHHcCCCCCCCCCCC
Confidence 357897 998887 4455542 4445566655
No 29
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.53 E-value=4 Score=20.09 Aligned_cols=28 Identities=36% Similarity=0.743 Sum_probs=18.0
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ep2_A 12 PYECSICGKSFT-KKSQLHVHQQIHTGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHHTTSSCCSCCSCCC
T ss_pred CcCCCCCCcccC-CHHHHHHHHHHhCCCCCCCCCCC
Confidence 57897 998887 4555542 3445667665
No 30
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=59.36 E-value=9.6 Score=20.74 Aligned_cols=25 Identities=28% Similarity=0.789 Sum_probs=18.9
Q ss_pred eCCCCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 23 PCPCGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 23 ~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
.|-||..+ .+...++|+.|.-|.+.
T Consensus 6 ~C~C~~~~--------~~~~MI~Cd~C~~W~H~ 30 (52)
T 3o7a_A 6 TCFCMKPF--------AGRPMIECNECHTWIHL 30 (52)
T ss_dssp CSTTCCBC--------TTCCEEECTTTCCEEET
T ss_pred EEEeCCcC--------CCCCEEEcCCCCccccc
Confidence 48888532 25688999999988775
No 31
>1nui_A DNA primase/helicase; zinc-biding domain, toprim fold, DNA replication, DNA-direct polymerase, primosome, late protein, ATP-binding; HET: DNA; 2.90A {Enterobacteria phage T7} SCOP: e.13.1.2 g.41.3.2
Probab=58.63 E-value=8.2 Score=26.79 Aligned_cols=32 Identities=25% Similarity=0.589 Sum_probs=21.5
Q ss_pred CCceEEEeCC-CCC--ceeeehhhhhcCceEEEcCCCcceE
Q 034819 16 ELQAYTYPCP-CGD--LFQITKDELRIGEEIARCPSCSLYI 53 (82)
Q Consensus 16 ~~~~y~y~CR-CGg--~f~i~~~~Le~g~~iv~C~sCSL~I 53 (82)
.+-..--+|| ||+ .|.+.. +|. .-|..|--..
T Consensus 9 ~~~~~~~~CP~Cg~~d~~~~~~----dg~--~~C~~Cg~~~ 43 (255)
T 1nui_A 9 SVFLYHIPCDNCGSSDGNSLFS----DGH--TFCYVCEKWT 43 (255)
T ss_dssp -CEEEEECCSSSCCSSCEEEET----TSC--EEETTTCCEE
T ss_pred cceecCCcCCCCCCCCCceEeC----CCC--eecccCCCcC
Confidence 3445677898 985 577763 242 7999998654
No 32
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.49 E-value=2.2 Score=25.72 Aligned_cols=11 Identities=36% Similarity=0.945 Sum_probs=9.2
Q ss_pred EeCCCCCceee
Q 034819 22 YPCPCGDLFQI 32 (82)
Q Consensus 22 y~CRCGg~f~i 32 (82)
+.||||+.|-.
T Consensus 33 f~CrCg~~FC~ 43 (67)
T 1x4w_A 33 GSCRCGYVFCM 43 (67)
T ss_dssp HCCSSSCCCCT
T ss_pred eEecCCCEehh
Confidence 78999998863
No 33
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=58.13 E-value=4.1 Score=19.96 Aligned_cols=28 Identities=29% Similarity=0.552 Sum_probs=17.3
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFS-LKSQLIVHQRSHTGVKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEES-SHHHHHHHGGGSSSCCCSCCTTC
T ss_pred ceECCCCCchhC-CHHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 998887 4455542 3444566655
No 34
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=57.97 E-value=5.5 Score=20.25 Aligned_cols=30 Identities=23% Similarity=0.548 Sum_probs=17.7
Q ss_pred EeCC-CCCceeeehhhhhc------CceEEEcCCCcce
Q 034819 22 YPCP-CGDLFQITKDELRI------GEEIARCPSCSLY 52 (82)
Q Consensus 22 y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL~ 52 (82)
|.|. ||-.|. +...|.. ++....|+.|.-.
T Consensus 2 ~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~C~~C~~~ 38 (57)
T 1bbo_A 2 YICEECGIRXK-KPSMLKKHIRTHTDVRPYHCTYCNFS 38 (57)
T ss_dssp CBCTTTCCBCS-SHHHHHHHHHHTSSCCCEECSSSSCE
T ss_pred CcCCCCcCcCC-CHHHHHHHHHhcCCCCCccCCCCCch
Confidence 5676 887776 3334432 3455778887643
No 35
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=57.79 E-value=9.3 Score=22.20 Aligned_cols=26 Identities=15% Similarity=0.423 Sum_probs=20.3
Q ss_pred EeCCCCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 22 YPCPCGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 22 y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
..|-||..+. +...++|+.|.-|.+.
T Consensus 17 ~~C~C~~~~~--------~~~MI~Cd~C~~WfH~ 42 (76)
T 1wem_A 17 LYCICRQPHN--------NRFMICCDRCEEWFHG 42 (76)
T ss_dssp CCSTTCCCCC--------SSCEEECSSSCCEEEH
T ss_pred CEEECCCccC--------CCCEEEeCCCCCcEeC
Confidence 5599997652 4578999999999775
No 36
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.73 E-value=4.2 Score=19.90 Aligned_cols=28 Identities=36% Similarity=0.566 Sum_probs=17.4
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++....|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFC-YISALRIHQRVHMGEKCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEES-SHHHHHHHHTTTCCSCSSCCSCC
T ss_pred CeECCCcCcccC-CHHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 998887 4455542 3444566655
No 37
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.36 E-value=4.8 Score=19.75 Aligned_cols=28 Identities=25% Similarity=0.431 Sum_probs=17.5
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFF-QYVSLIEHQVLHMGQKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEES-SHHHHHHHHHHHSCCSCCCTTCC
T ss_pred CEEccccChhhC-CHHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 998887 4444432 3444566655
No 38
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.07 E-value=4 Score=20.07 Aligned_cols=28 Identities=32% Similarity=0.648 Sum_probs=17.3
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~c 46 (46)
T 2ytk_A 12 PYKCNECGKVFT-QNSHLTNHWRIHTGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHHHHSSSSCSSCCCC
T ss_pred CEeCCcCCCccC-CHHHHHHHHHHHCCCCCCCCCCC
Confidence 57897 998887 4444432 3444566655
No 39
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=56.94 E-value=4.6 Score=19.75 Aligned_cols=28 Identities=32% Similarity=0.508 Sum_probs=17.3
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. +...|.. ++....|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFR-WASCLLKHQRVHSGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHGGGGTSCCCCSTTCC
T ss_pred CeECCccccccC-ChHHHHHHHHHhCCCCCCCCCCC
Confidence 57897 998887 4455542 3344566655
No 40
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.66 E-value=4 Score=20.01 Aligned_cols=28 Identities=25% Similarity=0.474 Sum_probs=17.4
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|.- ...|.. ++....|+.|
T Consensus 12 ~~~C~~C~k~F~~-~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCW-KSQLIMHQRTHVDDKHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESS-SHHHHHHHHHCCSCCCSCCCCC
T ss_pred CeeCCCCCCccCC-HHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 9988874 444432 3445566665
No 41
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=56.37 E-value=6.5 Score=23.32 Aligned_cols=31 Identities=26% Similarity=0.653 Sum_probs=22.4
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCCcce
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSCSLY 52 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL~ 52 (82)
.|.|+ ||-.|. +...|.. ++....|+-|.-.
T Consensus 28 ~h~C~~Cgk~F~-~~~~L~~H~~~H~~~k~~~C~~C~k~ 65 (85)
T 2lv2_A 28 CHLCPVCGESFA-SKGAQERHLRLLHAAQVFPCKYCPAT 65 (85)
T ss_dssp TEECTTSCCEES-SHHHHHHHHHTTSCSSSEECTTSSCE
T ss_pred CEECCCCCCCcC-cHHHHhhhhhhccCCCccCCCCCCCE
Confidence 37898 999888 5555543 5667899999753
No 42
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.18 E-value=11 Score=20.04 Aligned_cols=31 Identities=29% Similarity=0.626 Sum_probs=22.6
Q ss_pred EEEeCC-CCCceeeehhhhh-----cCceEEEcC-CCcce
Q 034819 20 YTYPCP-CGDLFQITKDELR-----IGEEIARCP-SCSLY 52 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le-----~g~~iv~C~-sCSL~ 52 (82)
-.|.|. ||..|. ...|. .++....|+ .|.-.
T Consensus 9 ~~~~C~~C~k~f~--~~~L~~H~~~~~~~p~~C~~~C~k~ 46 (66)
T 2eod_A 9 RTQPCTYCTKEFV--FDTIQSHQYQCPRLPVACPNQCGVG 46 (66)
T ss_dssp CEEECSSSCCEEE--HHHHHHHHHHCSSSEEECTTCCSCC
T ss_pred CCeeccccCCccC--HHHHHHHHHHcCCcCccCCcccCcc
Confidence 358897 999998 55554 256678999 89754
No 43
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.97 E-value=3.9 Score=20.07 Aligned_cols=28 Identities=29% Similarity=0.516 Sum_probs=17.9
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||..|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFS-FNSQLIVHQRIHTGENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCS-SHHHHHHHHTTTTTSCCSCCCCC
T ss_pred CeeCCCCCchhC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 57897 998887 4455542 3445566665
No 44
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.86 E-value=3.8 Score=20.21 Aligned_cols=28 Identities=29% Similarity=0.457 Sum_probs=17.1
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. +...|.. ++....|+.|
T Consensus 12 ~~~C~~C~k~F~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFG-RHSHLIEHLKRHFREKSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEES-SHHHHHHHHHHHHSTTSSCCSCC
T ss_pred CEEccccCcccC-CHHHHHHHHHHHcCCCCCCCCCC
Confidence 57897 998887 4444432 3344556655
No 45
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.70 E-value=4 Score=20.07 Aligned_cols=28 Identities=32% Similarity=0.648 Sum_probs=17.6
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~F~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytn_A 12 PYKCNECGKVFT-QNSHLARHRGIHTGEKPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCS-SHHHHHHHGGGTSCCCCCSCCCC
T ss_pred CeECCCCCCeeC-CHHHHHHHhhhcCCCCCCCCCCC
Confidence 47897 998887 4455542 3445566665
No 46
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.53 E-value=5.7 Score=19.54 Aligned_cols=28 Identities=29% Similarity=0.661 Sum_probs=17.7
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++....|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYK-RRLDLDFHQRVHTGEKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHHHHHCCCCCCSCCC
T ss_pred CeECcccCchhC-CHHHHHHHHHHHcCCCCCCCCCC
Confidence 57897 998887 4455542 3445566655
No 47
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.93 E-value=4.8 Score=19.56 Aligned_cols=28 Identities=25% Similarity=0.466 Sum_probs=17.1
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 10 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFS-SKSYLLVHQQTHAEEKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEES-SHHHHHHHHHHHTSSCSCSCCCC
T ss_pred CccCCCCCcccC-CHHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 998887 3444432 3444566555
No 48
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=54.88 E-value=8.3 Score=21.36 Aligned_cols=29 Identities=28% Similarity=0.764 Sum_probs=19.1
Q ss_pred EeCC-CCCceeeehhhhhc------CceEEEcCCCcc
Q 034819 22 YPCP-CGDLFQITKDELRI------GEEIARCPSCSL 51 (82)
Q Consensus 22 y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL 51 (82)
|.|. ||-.|. ....|.. |+....|+-|.-
T Consensus 5 y~C~~C~k~F~-~~~~L~~H~~~Ht~ekp~~C~~C~k 40 (60)
T 4gzn_C 5 FFCNFCGKTYR-DASGLSRHRRAHLGYRPRSCPECGK 40 (60)
T ss_dssp EECTTTCCEES-SHHHHHHHHHHHHTCCCEECTTTCC
T ss_pred ccCCCCCCEeC-CHHHHHHHHHHhCCCcCeECCCCCC
Confidence 6786 888886 4444442 566778888764
No 49
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.87 E-value=5.1 Score=19.73 Aligned_cols=28 Identities=32% Similarity=0.495 Sum_probs=17.5
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. +...|.. ++....|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em5_A 12 SHQCHECGRGFT-LKSHLNQHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHTTTSCSCCSSCCCC
T ss_pred CeECCcCCCccC-CHHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 998887 4455542 3344566655
No 50
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.60 E-value=5 Score=19.69 Aligned_cols=28 Identities=25% Similarity=0.493 Sum_probs=17.0
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFT-IRSNLIKHQKIHTKQKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHHHTSCCCCSSCSCC
T ss_pred CeECCCCChhhC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 47897 998887 4455542 3344556554
No 51
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=54.39 E-value=11 Score=21.04 Aligned_cols=26 Identities=23% Similarity=0.694 Sum_probs=19.2
Q ss_pred eC-CCCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 23 PC-PCGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 23 ~C-RCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
.| -|+..|. ++...++|+.|.-|.+.
T Consensus 8 ~C~~C~~~~~-------~~~~mI~Cd~C~~WfH~ 34 (64)
T 1we9_A 8 QCGACGESYA-------ADEFWICCDLCEMWFHG 34 (64)
T ss_dssp CCSSSCCCCC-------SSSCEEECSSSCCEEET
T ss_pred CCCCCCCccC-------CCCCEEEccCCCCCCCc
Confidence 48 5886552 23578999999999775
No 52
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.39 E-value=5.3 Score=19.59 Aligned_cols=28 Identities=29% Similarity=0.500 Sum_probs=17.1
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFY-TNSQCYSHQRSHSGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHHHSCCSSCCSSCCC
T ss_pred CcCCCCCCCcCC-ChHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 998887 4445542 3444566655
No 53
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.87 E-value=5.6 Score=19.49 Aligned_cols=28 Identities=32% Similarity=0.583 Sum_probs=17.2
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFS-VYSSLTTHQVIHTGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-CHHHHHHHHHHHHCCSCCSCCCC
T ss_pred CeECCCCCchhC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 47897 998887 4444442 3444566655
No 54
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.57 E-value=6 Score=19.38 Aligned_cols=28 Identities=32% Similarity=0.630 Sum_probs=17.1
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++....|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFR-HNSYLSRHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHTTTCCCCCCSCCCC
T ss_pred CeECCCCCchhC-ChHHHHHHHhhcCCCCCCCCCCC
Confidence 47897 998887 4455542 3344556555
No 55
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.54 E-value=5.4 Score=19.54 Aligned_cols=28 Identities=32% Similarity=0.598 Sum_probs=17.0
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFI-CRRDLYTHHMVHTGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-CHHHHHHHGGGGTTCCCSSTTCC
T ss_pred CccCCCccchhC-CHHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 998887 4455542 3344556554
No 56
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=53.08 E-value=7.4 Score=20.03 Aligned_cols=30 Identities=23% Similarity=0.600 Sum_probs=18.1
Q ss_pred EeCC-CCCceeeehhhhhc------CceEEEcCCCcce
Q 034819 22 YPCP-CGDLFQITKDELRI------GEEIARCPSCSLY 52 (82)
Q Consensus 22 y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL~ 52 (82)
|.|. ||-.|. +...|.. ++....|+-|.-.
T Consensus 3 ~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~C~~C~~~ 39 (60)
T 2adr_A 3 FVCEVCTRAFA-RQEHLKRHYRSHTNEKPYPCGLCNRA 39 (60)
T ss_dssp BCCTTTCCCBS-CHHHHHHHHHTTTSSCSEECTTTCCE
T ss_pred CcCCCCccccC-CHHHHHHHHHHhCCCCCccCCCCCCc
Confidence 5676 887776 3344432 3455778888653
No 57
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.00 E-value=4.9 Score=19.70 Aligned_cols=28 Identities=29% Similarity=0.596 Sum_probs=17.1
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFT-QNSHLARHRRVHTGGKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SSHHHHHHTHHHHSCCCSCSCCC
T ss_pred CeECCcCCchhC-CHHHHHHHHHhcCCCCCCCCCCC
Confidence 47897 998887 3444432 3444566655
No 58
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=52.69 E-value=2.3 Score=25.48 Aligned_cols=30 Identities=23% Similarity=0.747 Sum_probs=22.2
Q ss_pred ceEEEeCC-CCCceeeehhhhhcCceEEEcCCCcceE
Q 034819 18 QAYTYPCP-CGDLFQITKDELRIGEEIARCPSCSLYI 53 (82)
Q Consensus 18 ~~y~y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I 53 (82)
..+.|.|. ||-.|.+.. ...+.|..|.-.|
T Consensus 25 ~~v~Y~C~~CG~~~e~~~------~d~irCp~CG~RI 55 (70)
T 1twf_L 25 ATLKYICAECSSKLSLSR------TDAVRCKDCGHRI 55 (70)
T ss_dssp CCCCEECSSSCCEECCCT------TSTTCCSSSCCCC
T ss_pred ceEEEECCCCCCcceeCC------CCCccCCCCCceE
Confidence 45789996 999998862 2335899998754
No 59
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=52.15 E-value=4.4 Score=19.99 Aligned_cols=28 Identities=32% Similarity=0.590 Sum_probs=17.4
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~F~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFS-QTTHLIQHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCS-CHHHHHHHHHHHSSCCCSSCCCC
T ss_pred ceECCCCCchhC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 47897 998887 4445542 3445566655
No 60
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=51.90 E-value=13 Score=21.47 Aligned_cols=28 Identities=25% Similarity=0.695 Sum_probs=19.1
Q ss_pred EEeCC-CCCceeeehhhhhcCceEEEcC-CCcceEEE
Q 034819 21 TYPCP-CGDLFQITKDELRIGEEIARCP-SCSLYITV 55 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~g~~iv~C~-sCSL~I~V 55 (82)
.++|. |+.-|. .+...++|+ +|.-|.+-
T Consensus 8 ~~~C~~C~~p~~-------~~~~mI~CD~~C~~WfH~ 37 (65)
T 2vpb_A 8 VYPCGICTNEVN-------DDQDAILCEASCQKWFHR 37 (65)
T ss_dssp -CBCTTTCSBCC-------TTSCEEEBTTTTCCEEEH
T ss_pred cCcCccCCCccC-------CCCCeEecccCccccCch
Confidence 45676 775543 345789999 99998653
No 61
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.61 E-value=5.9 Score=19.40 Aligned_cols=28 Identities=29% Similarity=0.554 Sum_probs=17.4
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. +...|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFH-RHTHLNEHRRIHTGYRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHHHHTCCCSSCSSCC
T ss_pred CeECCCCCCeeC-ChHHHHHHHHHcCCCCCCCCCCC
Confidence 47897 998887 4455542 3444566655
No 62
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.47 E-value=6.3 Score=19.29 Aligned_cols=28 Identities=29% Similarity=0.694 Sum_probs=17.2
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFS-HRQSLSVHQRIHSGKKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHGGGSSCCCSCSSCC
T ss_pred CeeCCCcCCccC-CHHHHHHHHHHhcCCCCCCCCCC
Confidence 47897 998887 4455542 3344556555
No 63
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.41 E-value=5.3 Score=19.60 Aligned_cols=28 Identities=29% Similarity=0.510 Sum_probs=17.7
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++....|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFS-DHIGLNQHRRIHTGEKPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBS-SHHHHHHHHTTTTTCCCCSSCCC
T ss_pred CeECCCCCceeC-CHHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 998887 4455542 3445566655
No 64
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=51.34 E-value=6.3 Score=16.88 Aligned_cols=11 Identities=36% Similarity=1.098 Sum_probs=8.2
Q ss_pred EeCC-CCCceee
Q 034819 22 YPCP-CGDLFQI 32 (82)
Q Consensus 22 y~CR-CGg~f~i 32 (82)
|.|. ||-.|.-
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 1rik_A 3 FACPECPKRFMR 14 (29)
T ss_dssp EECSSSSCEESC
T ss_pred ccCCCCCchhCC
Confidence 6787 9888763
No 65
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.20 E-value=6.4 Score=19.20 Aligned_cols=28 Identities=36% Similarity=0.577 Sum_probs=16.9
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. +...|.. ++.-..|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFG-LSAELVRHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHGGGCCCSCCSSCCC
T ss_pred CeECCCCChhhC-CHHHHHHHHHhcCCCCCCCCCCC
Confidence 58897 998887 3444432 3334556554
No 66
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=51.14 E-value=11 Score=22.03 Aligned_cols=29 Identities=14% Similarity=0.404 Sum_probs=20.9
Q ss_pred EEEeCCCCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 20 YTYPCPCGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 20 y~y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
....|-||..| ..+...++|+.|.-|-+.
T Consensus 9 ~~~yCiC~~~~-------~~~~~MI~Cd~C~~WfH~ 37 (75)
T 3kqi_A 9 VPVYCVCRLPY-------DVTRFMIECDACKDWFHG 37 (75)
T ss_dssp CCEETTTTEEC-------CTTSCEEECTTTCCEEEH
T ss_pred CeeEEECCCcC-------CCCCCEEEcCCCCCCEec
Confidence 34569998544 124578999999999775
No 67
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.11 E-value=6.3 Score=19.28 Aligned_cols=28 Identities=25% Similarity=0.540 Sum_probs=16.9
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYN-QRVHLTQHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEES-SSHHHHTTGGGGSSCCSSCSCCC
T ss_pred CeECCCCCcccC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 57897 998887 3444543 3334556554
No 68
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=50.68 E-value=6.8 Score=16.76 Aligned_cols=10 Identities=50% Similarity=1.454 Sum_probs=8.0
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 4 ~~C~~C~k~f~ 14 (28)
T 2kvf_A 4 YSCSVCGKRFS 14 (28)
T ss_dssp EECSSSCCEES
T ss_pred ccCCCCCcccC
Confidence 6787 998876
No 69
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=50.66 E-value=6.6 Score=16.78 Aligned_cols=10 Identities=20% Similarity=0.823 Sum_probs=7.9
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvh_A 4 FSCSLCPQRSR 14 (27)
T ss_dssp EECSSSSCEES
T ss_pred ccCCCcChhhC
Confidence 6786 998876
No 70
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=50.57 E-value=7.1 Score=16.63 Aligned_cols=10 Identities=50% Similarity=1.374 Sum_probs=8.0
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 4 ~~C~~C~~~f~ 14 (30)
T 2m0d_A 4 YQCDYCGRSFS 14 (30)
T ss_dssp EECTTTCCEES
T ss_pred ccCCCCCcccC
Confidence 6786 998886
No 71
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=50.38 E-value=6.9 Score=16.59 Aligned_cols=10 Identities=40% Similarity=1.132 Sum_probs=7.7
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2m0f_A 3 LKCRECGKQFT 13 (29)
T ss_dssp EECTTTSCEES
T ss_pred ccCCCCCCccC
Confidence 6787 988776
No 72
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=50.28 E-value=8.2 Score=20.87 Aligned_cols=33 Identities=33% Similarity=0.660 Sum_probs=22.4
Q ss_pred eEEEeCC-CCCceeeehhhhhc------CceEEEcCCCcce
Q 034819 19 AYTYPCP-CGDLFQITKDELRI------GEEIARCPSCSLY 52 (82)
Q Consensus 19 ~y~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL~ 52 (82)
.-.|.|+ ||..|. +...|.. ++....|+-|.-.
T Consensus 15 ~~~~~C~~C~k~f~-~~~~l~~H~~~H~~~~~~~C~~C~k~ 54 (74)
T 2lce_A 15 DKPYKCDRCQASFR-YKGNLASHKTVHTGEKPYRCNICGAQ 54 (74)
T ss_dssp CCSBCCTTSSCCBS-CHHHHHHHHHHHCCCCSEECTTTCCE
T ss_pred CCCeECCCCCceeC-CHHHHHHHHHHcCCCCCEECCCCCch
Confidence 3457897 998887 3444442 4556889999754
No 73
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=49.89 E-value=5.3 Score=17.09 Aligned_cols=10 Identities=30% Similarity=0.999 Sum_probs=7.8
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 1ard_A 3 FVCEVCTRAFA 13 (29)
T ss_dssp CBCTTTCCBCS
T ss_pred eECCCCCcccC
Confidence 6787 998876
No 74
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.48 E-value=5.1 Score=19.56 Aligned_cols=28 Identities=43% Similarity=0.738 Sum_probs=17.4
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. +...|.. ++....|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFT-WKSRLRIHQKCHTGERHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCS-SHHHHHHHHHHHSCCSSCCSCCC
T ss_pred CccCCccChhhC-CHHHHHHHHHhcCCCCCCCCCCC
Confidence 47897 998887 4455542 3344566655
No 75
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.40 E-value=5.8 Score=19.48 Aligned_cols=28 Identities=29% Similarity=0.623 Sum_probs=17.3
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+-|
T Consensus 12 ~~~C~~C~k~F~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYN-RRLNLDMHQRVHMGEKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCS-SHHHHHHHGGGGGSCCCCCSCCC
T ss_pred CeeCcccCchhC-CHHHHHHHHHhcCCCCCCCCCCC
Confidence 47897 998887 4455542 3344566655
No 76
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.06 E-value=5.3 Score=19.50 Aligned_cols=17 Identities=29% Similarity=0.614 Sum_probs=11.6
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. +...|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2emm_A 12 PHKCNECGKSFI-QSAHLI 29 (46)
T ss_dssp SEECSSSCCEES-SHHHHH
T ss_pred CeeCCCCChhhC-CHHHHH
Confidence 47897 998887 444443
No 77
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.30 E-value=4.7 Score=19.79 Aligned_cols=28 Identities=25% Similarity=0.491 Sum_probs=17.0
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFC-GRSRLNRHSMVHTAEKPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCS-SHHHHHHHHHHTTCCCSSSCCCC
T ss_pred CcCCCcCCchhC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 47897 998887 4445542 3444556655
No 78
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.11 E-value=4.9 Score=19.71 Aligned_cols=28 Identities=29% Similarity=0.610 Sum_probs=16.9
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFT-QNSQLHSHQRVHTGEKPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEES-SHHHHHHHGGGGSCCCCSCCCCC
T ss_pred CeeCCCCCcccC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 47897 998887 4445542 3444556655
No 79
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=48.09 E-value=15 Score=22.56 Aligned_cols=27 Identities=22% Similarity=0.472 Sum_probs=19.9
Q ss_pred EeCCCCCceeeehhhhhcCceEEEcCCCcceEEEE
Q 034819 22 YPCPCGDLFQITKDELRIGEEIARCPSCSLYITVI 56 (82)
Q Consensus 22 y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~ 56 (82)
-.|-||... ++..+++|++|..|.+..
T Consensus 29 vrCiC~~~~--------~~~~mi~Cd~C~~w~H~~ 55 (98)
T 2lv9_A 29 TRCICGFTH--------DDGYMICCDKCSVWQHID 55 (98)
T ss_dssp CCCTTSCCS--------CSSCEEEBTTTCBEEETT
T ss_pred EEeECCCcc--------CCCcEEEcCCCCCcCcCc
Confidence 358888543 235789999999998763
No 80
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=48.06 E-value=11 Score=24.72 Aligned_cols=28 Identities=14% Similarity=0.227 Sum_probs=20.0
Q ss_pred EeCCCCCceeeehhhhhcCceEEEcCCCcceEEEE
Q 034819 22 YPCPCGDLFQITKDELRIGEEIARCPSCSLYITVI 56 (82)
Q Consensus 22 y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~ 56 (82)
..|-||..+ .++...++|+.|.-|.+..
T Consensus 9 ~~C~C~~~~-------~~~~~mi~Cd~C~~WfH~~ 36 (174)
T 2ri7_A 9 LYCICKTPE-------DESKFYIGCDRCQNWYHGR 36 (174)
T ss_dssp EETTTTEEC-------CTTSCEEECTTTCCEEEHH
T ss_pred cEeeCCCCC-------CCCCCEeECCCCCchhChh
Confidence 358898654 1245689999999997753
No 81
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=48.00 E-value=11 Score=20.01 Aligned_cols=33 Identities=27% Similarity=0.514 Sum_probs=21.9
Q ss_pred EEEeCC-CCCceeeehhhhhc------CceEEEcCCCcceE
Q 034819 20 YTYPCP-CGDLFQITKDELRI------GEEIARCPSCSLYI 53 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL~I 53 (82)
-.|.|. ||-.|. +...|.. ++....|+-|.-..
T Consensus 8 ~~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C~~~f 47 (70)
T 1x5w_A 8 HPEKCSECSYSCS-SKAALRIHERIHCTDRPFKCNYCSFDT 47 (70)
T ss_dssp CSEECSSSSCEES-SHHHHHHHHGGGCCSCSEECSSSSCEE
T ss_pred CCeECCCCCcccC-CHHHHHHHHHHcCCCCCEeCCCCCCcc
Confidence 357897 998887 3444432 44568899997643
No 82
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=47.46 E-value=5.6 Score=19.88 Aligned_cols=30 Identities=27% Similarity=0.483 Sum_probs=18.7
Q ss_pred EEEeCC-CCCceeeehhhhhc------CceEEEcCCCc
Q 034819 20 YTYPCP-CGDLFQITKDELRI------GEEIARCPSCS 50 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCS 50 (82)
-.|.|. ||-.|. ....|.. ++.-..|+-|+
T Consensus 11 k~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C~ 47 (48)
T 2epr_A 11 KQVACEICGKIFR-DVYHLNRHKLSHSGEKPYSSGPSS 47 (48)
T ss_dssp CSEEETTTTEEES-SHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred cCeeCCCCCcccC-CHHHHHHHHHhcCCCCCccCCCCC
Confidence 357896 998876 3444432 34456787775
No 83
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=47.06 E-value=13 Score=19.91 Aligned_cols=31 Identities=32% Similarity=0.696 Sum_probs=21.0
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCCcce
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSCSLY 52 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL~ 52 (82)
.|.|+ ||-.|. ....|.. ++....|+-|.-.
T Consensus 14 ~~~C~~C~k~f~-~~~~L~~H~~~h~~~~~~~C~~C~~~ 51 (72)
T 1x6e_A 14 PYGCVECGKAFS-RSSILVQHQRVHTGEKPYKCLECGKA 51 (72)
T ss_dssp CEECSSSCCEES-SHHHHHHHHHGGGCSCCEECSSSCCE
T ss_pred CccCCCCCCccC-CHHHHHHHHHhcCCCCCeECCCCCcc
Confidence 57897 998887 3444432 4566889999753
No 84
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.02 E-value=5.2 Score=19.56 Aligned_cols=28 Identities=32% Similarity=0.616 Sum_probs=17.1
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFS-QTSKLARHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCS-SHHHHHHHHTTTTTCSCCCSCCC
T ss_pred CcCCCCCCCccC-CHHHHHHHHHhcCCCCCCCCCCC
Confidence 47797 998887 4455542 3344566655
No 85
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.76 E-value=5.1 Score=19.58 Aligned_cols=28 Identities=32% Similarity=0.501 Sum_probs=17.1
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFS-RAPCLLKHERLHSGEKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCS-CHHHHHHHHHHCCSSSCCCCCCC
T ss_pred CeECCCCCCccC-chHHHHHHHHhcCCCCCCCCCCC
Confidence 47897 998887 4444432 3444566655
No 86
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=46.70 E-value=5.9 Score=16.78 Aligned_cols=10 Identities=40% Similarity=1.132 Sum_probs=7.5
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|+ ||-.|.
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 2m0e_A 3 HKCPHCDKKFN 13 (29)
T ss_dssp CCCSSCCCCCC
T ss_pred CcCCCCCcccC
Confidence 5687 887775
No 87
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=46.63 E-value=14 Score=19.22 Aligned_cols=31 Identities=23% Similarity=0.593 Sum_probs=20.5
Q ss_pred EEeCC-CCCceeeehhhhh--------cCceEEEcCCCcce
Q 034819 21 TYPCP-CGDLFQITKDELR--------IGEEIARCPSCSLY 52 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le--------~g~~iv~C~sCSL~ 52 (82)
.|.|. ||-.|. +...|. .++....|+.|.-.
T Consensus 10 ~~~C~~C~k~f~-~~~~l~~H~~~~H~~~~~~~~C~~C~k~ 49 (66)
T 2drp_A 10 TYRCKVCSRVYT-HISNFCRHYVTSHKRNVKVYPCPFCFKE 49 (66)
T ss_dssp EEECTTTCCEES-SHHHHHHHHHHHSSSSCCCEECTTTCCE
T ss_pred ceECCCCcchhC-CHHHHHHHHHHHcCCCCcCeECCCCCCc
Confidence 57897 998887 334332 24456789988753
No 88
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=46.32 E-value=6.3 Score=16.64 Aligned_cols=10 Identities=40% Similarity=1.029 Sum_probs=7.6
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 2 ~~C~~C~k~f~ 12 (27)
T 1znf_A 2 YKCGLCERSFV 12 (27)
T ss_dssp CBCSSSCCBCS
T ss_pred ccCCCCCCcCC
Confidence 5686 888876
No 89
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=46.25 E-value=10 Score=20.28 Aligned_cols=33 Identities=21% Similarity=0.509 Sum_probs=22.5
Q ss_pred EEEeCC-CCCceeeehhhhh---cCceEEEcCCCcceE
Q 034819 20 YTYPCP-CGDLFQITKDELR---IGEEIARCPSCSLYI 53 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le---~g~~iv~C~sCSL~I 53 (82)
-.|.|+ ||..|.- ...|. .++....|+.|.-..
T Consensus 13 k~~~C~~C~k~F~~-~~~l~~~H~~~k~~~C~~C~k~f 49 (62)
T 1vd4_A 13 ASFKCPVCSSTFTD-LEANQLFDPMTGTFRCTFCHTEV 49 (62)
T ss_dssp SEEECSSSCCEEEH-HHHHHHEETTTTEEBCSSSCCBC
T ss_pred CCccCCCCCchhcc-HHHhHhhcCCCCCEECCCCCCcc
Confidence 358897 9999874 34442 245578899998643
No 90
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=46.14 E-value=7.9 Score=22.56 Aligned_cols=10 Identities=40% Similarity=1.145 Sum_probs=7.4
Q ss_pred EEeCC-CCCce
Q 034819 21 TYPCP-CGDLF 30 (82)
Q Consensus 21 ~y~CR-CGg~f 30 (82)
-|.|| ||..|
T Consensus 27 rHHCR~CG~v~ 37 (73)
T 1vfy_A 27 KHHCRSCGGVF 37 (73)
T ss_dssp CEECTTTCCEE
T ss_pred cccCCCCCEEE
Confidence 48898 98644
No 91
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=51.92 E-value=4.3 Score=17.29 Aligned_cols=10 Identities=50% Similarity=1.295 Sum_probs=7.4
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 3 ~~C~~C~k~f~ 13 (26)
T 2lvu_A 3 YVCERCGKRFV 13 (26)
Confidence 6686 887776
No 92
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.67 E-value=9.8 Score=18.51 Aligned_cols=17 Identities=35% Similarity=0.942 Sum_probs=12.0
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2ep3_A 12 PYRCAECGKAFT-DRSNLF 29 (46)
T ss_dssp SEECSSSCCEES-SHHHHH
T ss_pred CeECCCCCchhC-CHHHHH
Confidence 47897 998887 455554
No 93
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=45.04 E-value=4.9 Score=23.77 Aligned_cols=30 Identities=30% Similarity=0.728 Sum_probs=22.3
Q ss_pred eEEEeC-CCCCceeeehhhhhcCceEEEcCCCcceEE
Q 034819 19 AYTYPC-PCGDLFQITKDELRIGEEIARCPSCSLYIT 54 (82)
Q Consensus 19 ~y~y~C-RCGg~f~i~~~~Le~g~~iv~C~sCSL~I~ 54 (82)
...|-| +||..+.|.. ...+.|+.|.-.|-
T Consensus 19 ~v~Y~C~~Cg~~~~l~~------~~~iRC~~CG~RIL 49 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQA------KEVIRCRECGHRVM 49 (63)
T ss_dssp CCCCBCSSSCCBCCCCS------SSCCCCSSSCCCCC
T ss_pred CeEEECCCCCCeeecCC------CCceECCCCCcEEE
Confidence 467899 6998887652 25589999987663
No 94
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=44.99 E-value=15 Score=22.47 Aligned_cols=28 Identities=29% Similarity=0.659 Sum_probs=18.5
Q ss_pred EEeCC-CCCceeeehhhhhcCceEEEcCCCcceE
Q 034819 21 TYPCP-CGDLFQITKDELRIGEEIARCPSCSLYI 53 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I 53 (82)
.|+|+ ||....... +..+..|+.|-..+
T Consensus 27 ~y~Cp~CG~~~v~r~-----atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 27 DHACPNCGEDRVDRQ-----GTGIWQCSYCDYKF 55 (83)
T ss_dssp CEECSSSCCEEEEEE-----ETTEEEETTTCCEE
T ss_pred cCcCCCCCCcceecc-----CCCeEECCCCCCEe
Confidence 68998 996433222 13478999998754
No 95
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=44.91 E-value=9.2 Score=17.17 Aligned_cols=16 Identities=31% Similarity=0.623 Sum_probs=10.8
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.|.|. ||-.|. ....|
T Consensus 7 ~~~C~~C~k~f~-~~~~L 23 (35)
T 2elx_A 7 GYVCALCLKKFV-SSIRL 23 (35)
T ss_dssp SEECSSSCCEES-SHHHH
T ss_pred CeECCCCcchhC-CHHHH
Confidence 47897 998887 33343
No 96
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=44.85 E-value=4.1 Score=26.42 Aligned_cols=25 Identities=40% Similarity=0.922 Sum_probs=16.3
Q ss_pred eEEEeCC-CCCceeeehhhhhcCceEEEcCCC
Q 034819 19 AYTYPCP-CGDLFQITKDELRIGEEIARCPSC 49 (82)
Q Consensus 19 ~y~y~CR-CGg~f~i~~~~Le~g~~iv~C~sC 49 (82)
++-|.|+ ||-.| .+.+ ..-..|+.|
T Consensus 65 v~p~~C~~CG~~F---~~~~---~kPsrCP~C 90 (105)
T 2gmg_A 65 IKPAQCRKCGFVF---KAEI---NIPSRCPKC 90 (105)
T ss_dssp ECCCBBTTTCCBC---CCCS---SCCSSCSSS
T ss_pred EECcChhhCcCee---cccC---CCCCCCcCC
Confidence 5778898 99887 1111 233678888
No 97
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=44.72 E-value=5.9 Score=19.39 Aligned_cols=28 Identities=32% Similarity=0.585 Sum_probs=16.9
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~F~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFS-QASSLRLHQNVHVGEKPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCS-SHHHHHHHGGGGSSSSCSCSSCC
T ss_pred CeECCCCCcccC-CHHHHHHHHHHcCCCCCcCCCCC
Confidence 47897 998887 4445542 3344556655
No 98
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=44.57 E-value=5.6 Score=17.25 Aligned_cols=10 Identities=40% Similarity=1.026 Sum_probs=7.6
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvg_A 4 YRCPLCRAGCP 14 (27)
T ss_dssp EEETTTTEEES
T ss_pred cCCCCCCcccC
Confidence 6786 987776
No 99
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=44.37 E-value=8.6 Score=22.88 Aligned_cols=10 Identities=40% Similarity=1.188 Sum_probs=7.3
Q ss_pred EEeCC-CCCce
Q 034819 21 TYPCP-CGDLF 30 (82)
Q Consensus 21 ~y~CR-CGg~f 30 (82)
-|.|| ||..|
T Consensus 35 rHHCR~CG~v~ 45 (82)
T 2yw8_A 35 KHHCRNCGHIF 45 (82)
T ss_dssp CEECTTTCCEE
T ss_pred cccCCCCCCEE
Confidence 48898 98643
No 100
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.12 E-value=5.6 Score=19.49 Aligned_cols=28 Identities=36% Similarity=0.617 Sum_probs=16.9
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2en6_A 12 PYGCNECGKTFS-QKSILSAHQRTHTGEKPSGPSSG 46 (46)
T ss_dssp CEEETTTTEEES-SHHHHHHHHHHHSSCCCSSSCCC
T ss_pred CeECCCCCcccC-chHHHHHHHHHcCCCCCCCCCCC
Confidence 47897 998886 4445542 3444556655
No 101
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.02 E-value=10 Score=18.47 Aligned_cols=28 Identities=29% Similarity=0.549 Sum_probs=16.7
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFR-YGSSLTVHQRIHTGEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEES-SHHHHHHHHTTTSSSCCCSCCCC
T ss_pred CeeCcccCcccC-ChHHHHHHHHHhCCCCCCCCCCC
Confidence 57897 998887 4444442 3344556554
No 102
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=43.64 E-value=16 Score=19.53 Aligned_cols=30 Identities=37% Similarity=1.021 Sum_probs=16.5
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCCcc
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSCSL 51 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL 51 (82)
.|.|+ ||..|. +...|.. ++....|+-|..
T Consensus 29 ~~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~C~~C~~ 65 (82)
T 2kmk_A 29 PYPCQYCGKRFH-QKSDMKKHTFIHTGEKPHKCQVCGK 65 (82)
T ss_dssp CEECSSSCCEES-SHHHHHHHHHHHHTCCCEECTTTSC
T ss_pred CeeCCcCChhhC-CHHHHHHHHHHhcCCCCCcCCCcch
Confidence 35675 776665 3334432 344567777754
No 103
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.63 E-value=7.3 Score=19.09 Aligned_cols=28 Identities=39% Similarity=0.682 Sum_probs=16.9
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFS-SKSYLIIHMRTHSGEKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCS-CHHHHHHHHTTTCCSCSSCCCCC
T ss_pred CcCCCccChhhC-ChHHHHHHHHHhCCCCCCCCCCC
Confidence 47897 998887 4455542 3334556554
No 104
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=43.61 E-value=5.7 Score=19.47 Aligned_cols=28 Identities=32% Similarity=0.610 Sum_probs=16.5
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++....|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYN-SKFNLDMHQKVHTGERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEES-CHHHHHHHHTTSCSCCSSCCSCC
T ss_pred CeECCCCCCccC-CHHHHHHHHHhhCCCCCCCCCCC
Confidence 47897 998887 4445542 3334556554
No 105
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=43.20 E-value=9.8 Score=18.59 Aligned_cols=28 Identities=29% Similarity=0.450 Sum_probs=16.9
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+-|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFS-GKLRLLVHQRMHTREKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEES-SHHHHHHHHGGGCCSSCCSCCCC
T ss_pred CeECCCCCcccC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 47897 998887 4455542 3344556554
No 106
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=43.05 E-value=6.7 Score=16.71 Aligned_cols=10 Identities=30% Similarity=0.663 Sum_probs=7.6
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1klr_A 3 YQCQYCEFRSA 13 (30)
T ss_dssp CCCSSSSCCCS
T ss_pred ccCCCCCCccC
Confidence 5786 887776
No 107
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=42.96 E-value=9.1 Score=22.83 Aligned_cols=9 Identities=33% Similarity=1.054 Sum_probs=6.7
Q ss_pred EEeCC-CCCc
Q 034819 21 TYPCP-CGDL 29 (82)
Q Consensus 21 ~y~CR-CGg~ 29 (82)
-|.|| ||..
T Consensus 30 rHHCR~CG~v 39 (84)
T 1x4u_A 30 RRSCSNCGNS 39 (84)
T ss_dssp CEECSSSCCE
T ss_pred hhhhcCCCcE
Confidence 48898 9863
No 108
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=42.89 E-value=18 Score=20.14 Aligned_cols=29 Identities=31% Similarity=0.692 Sum_probs=18.5
Q ss_pred EeCC-CCCceeeehhhhhc------CceEEEcCCCcc
Q 034819 22 YPCP-CGDLFQITKDELRI------GEEIARCPSCSL 51 (82)
Q Consensus 22 y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL 51 (82)
|.|. ||-.|. +...|.. ++....|+.|.-
T Consensus 4 ~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C~k 39 (88)
T 1llm_C 4 FQCRICMRNFS-RSDHLTTHIRTHTGEKPFACDICGR 39 (88)
T ss_dssp EECTTTCCEES-CHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred CcCCCCCCccC-CHHHHHHHHHHcCCCCCccCCCCCC
Confidence 6786 887776 3444442 445678888864
No 109
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=42.55 E-value=6.1 Score=19.40 Aligned_cols=28 Identities=29% Similarity=0.625 Sum_probs=16.5
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFS-RRSALNVHHKLHTGEKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBS-STTHHHHHHHHHSCCSSCSCCCC
T ss_pred CcccCccCcccC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 47897 998887 3444432 3344556554
No 110
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.76 E-value=12 Score=17.49 Aligned_cols=11 Identities=27% Similarity=0.479 Sum_probs=9.1
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
.|.|. ||-.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (37)
T 2elm_A 9 LYYCSQCHYSSI 20 (37)
T ss_dssp EEECSSSSCEEE
T ss_pred CeECCCCCcccC
Confidence 58897 998886
No 111
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=41.65 E-value=7.8 Score=16.70 Aligned_cols=10 Identities=40% Similarity=1.178 Sum_probs=7.6
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1paa_A 3 YACGLCNRAFT 13 (30)
T ss_dssp SBCTTTCCBCS
T ss_pred cCCcccCcccC
Confidence 5786 988776
No 112
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.64 E-value=11 Score=17.15 Aligned_cols=11 Identities=27% Similarity=1.159 Sum_probs=8.9
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
.|.|+ ||-.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2els_A 9 IFTCEYCNKVFK 20 (36)
T ss_dssp CEECTTTCCEES
T ss_pred CEECCCCCceeC
Confidence 57897 998886
No 113
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=41.33 E-value=12 Score=25.68 Aligned_cols=30 Identities=23% Similarity=0.714 Sum_probs=19.9
Q ss_pred ceeccCCceEEEeCC-CCCceeeehhhhhcCceEEEcC--CCcceE
Q 034819 11 MEWNEELQAYTYPCP-CGDLFQITKDELRIGEEIARCP--SCSLYI 53 (82)
Q Consensus 11 m~~~e~~~~y~y~CR-CGg~f~i~~~~Le~g~~iv~C~--sCSL~I 53 (82)
|.+++++ |...|| ||+ |..++.|+ +|+-..
T Consensus 71 f~~DeDG--~~~yC~wC~~-----------Gg~l~~Cdn~~C~r~F 103 (159)
T 3a1b_A 71 YQYDDDG--YQSYCTICCG-----------GREVLMCGNNNCCRCF 103 (159)
T ss_dssp TCBCTTS--SBSSCTTTSC-----------CSEEEECSSTTTCCEE
T ss_pred cccCCCC--CcceeeEecC-----------CCeEEeeCCCCCCCch
Confidence 4454444 566799 884 45888999 777543
No 114
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.10 E-value=11 Score=17.06 Aligned_cols=11 Identities=36% Similarity=0.948 Sum_probs=8.9
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
.|.|. ||-.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elt_A 9 PYKCPQCSYASA 20 (36)
T ss_dssp SEECSSSSCEES
T ss_pred CCCCCCCCcccC
Confidence 47897 998886
No 115
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=40.69 E-value=10 Score=24.42 Aligned_cols=10 Identities=40% Similarity=1.238 Sum_probs=7.1
Q ss_pred EEeCC-CCCce
Q 034819 21 TYPCP-CGDLF 30 (82)
Q Consensus 21 ~y~CR-CGg~f 30 (82)
-|.|| ||..|
T Consensus 85 rHHCR~CG~vf 95 (125)
T 1joc_A 85 RHHCRQCGNIF 95 (125)
T ss_dssp CEECTTTCCEE
T ss_pred cccCCCCCeEE
Confidence 38898 98643
No 116
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=39.96 E-value=12 Score=16.85 Aligned_cols=11 Identities=27% Similarity=0.830 Sum_probs=8.7
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
.|.|. ||-.|.
T Consensus 7 ~~~C~~C~k~f~ 18 (35)
T 1srk_A 7 PFVCRICLSAFT 18 (35)
T ss_dssp CEECSSSCCEES
T ss_pred CeeCCCCCcccC
Confidence 47897 998886
No 117
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=39.94 E-value=18 Score=19.17 Aligned_cols=32 Identities=34% Similarity=0.758 Sum_probs=21.6
Q ss_pred EEEeCC---CCCceeeehhhhhc------CceEEEcCCCcce
Q 034819 20 YTYPCP---CGDLFQITKDELRI------GEEIARCPSCSLY 52 (82)
Q Consensus 20 y~y~CR---CGg~f~i~~~~Le~------g~~iv~C~sCSL~ 52 (82)
-.|.|+ ||..|. +...|.. ++....|+-|.-.
T Consensus 18 ~~~~C~~~~C~k~f~-~~~~l~~H~~~h~~~~~~~C~~C~~~ 58 (73)
T 1f2i_G 18 RPYACPVESCDRRFS-RSDELTRHIRIHTGQKPFQCRICMRN 58 (73)
T ss_dssp CCEECSSTTBCCEES-SHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred CccCCcCCCCCCccC-CHHHHHHHHHhhCCCCCeECCCCCch
Confidence 357896 998887 4444542 4556889999754
No 118
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.72 E-value=5.1 Score=19.59 Aligned_cols=28 Identities=29% Similarity=0.578 Sum_probs=16.6
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~F~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFT-QNSHLANHQRIHTGVKPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECS-SHHHHHHHHGGGSCCCSCSSCCC
T ss_pred CeECCCcChhhC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 47787 998876 4444432 3344556655
No 119
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.70 E-value=7.1 Score=19.21 Aligned_cols=28 Identities=25% Similarity=0.494 Sum_probs=17.1
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~C~k~f~-~~~~L~~H~~~H~~~~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFG-DNSSCTQHQRLHTGQRPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCS-SHHHHHHHHHHHHSCCCCCCCCC
T ss_pred CcCCCCCCchhC-CHHHHHHHHHHcCCCCCCCCCCC
Confidence 47797 998887 4455542 3444566655
No 120
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=39.69 E-value=11 Score=22.45 Aligned_cols=10 Identities=30% Similarity=0.873 Sum_probs=7.2
Q ss_pred EEeCC-CCCce
Q 034819 21 TYPCP-CGDLF 30 (82)
Q Consensus 21 ~y~CR-CGg~f 30 (82)
-|.|| ||..|
T Consensus 37 rHHCR~CG~v~ 47 (84)
T 1z2q_A 37 RHHCRNCGYVL 47 (84)
T ss_dssp CEECTTTCCEE
T ss_pred cccccCCCcEE
Confidence 48898 98643
No 121
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.66 E-value=12 Score=17.07 Aligned_cols=11 Identities=18% Similarity=0.682 Sum_probs=8.9
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
.|.|. ||-.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elq_A 9 PFKCSLCEYATR 20 (36)
T ss_dssp SEECSSSSCEES
T ss_pred CccCCCCCchhC
Confidence 57897 998886
No 122
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=39.61 E-value=9.6 Score=17.47 Aligned_cols=11 Identities=36% Similarity=1.225 Sum_probs=8.8
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
.|.|. ||-.|.
T Consensus 11 ~~~C~~C~k~f~ 22 (37)
T 1p7a_A 11 PFQCPDCDRSFS 22 (37)
T ss_dssp SBCCTTTCCCBS
T ss_pred CccCCCCCcccC
Confidence 47897 998886
No 123
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=45.75 E-value=6.2 Score=17.06 Aligned_cols=10 Identities=40% Similarity=1.112 Sum_probs=7.4
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2lvt_A 3 CQCVMCGKAFT 13 (29)
Confidence 6786 887775
No 124
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.47 E-value=12 Score=17.00 Aligned_cols=11 Identities=36% Similarity=0.999 Sum_probs=8.9
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
.|.|. ||-.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elv_A 9 LYDCHICERKFK 20 (36)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCCccC
Confidence 57897 998886
No 125
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=39.14 E-value=28 Score=25.77 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=17.3
Q ss_pred cCceEEEcCCCcceEEEEeec
Q 034819 39 IGEEIARCPSCSLYITVIYNI 59 (82)
Q Consensus 39 ~g~~iv~C~sCSL~I~V~~~~ 59 (82)
.+.-+-.|..|--.+|+.+..
T Consensus 249 ~~~r~e~C~~C~~YlK~~~~~ 269 (309)
T 2fiy_A 249 AVLRAETCPSCQGYLKQFYLE 269 (309)
T ss_dssp CSEEEEEETTTTEEEEEEETT
T ss_pred cceEEEEcccccchHhhhhhc
Confidence 345688999999999999763
No 126
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=38.78 E-value=17 Score=22.44 Aligned_cols=35 Identities=17% Similarity=0.474 Sum_probs=19.2
Q ss_pred EEeCC-CCCc--eeeehhhhhcCceEEEcCCCcceEEEE
Q 034819 21 TYPCP-CGDL--FQITKDELRIGEEIARCPSCSLYITVI 56 (82)
Q Consensus 21 ~y~CR-CGg~--f~i~~~~Le~g~~iv~C~sCSL~I~V~ 56 (82)
.+.|| ||-. -.+..+ ...+.-.+.|..|-+.-...
T Consensus 23 ~F~CPfCnh~~sV~vkid-k~~~~g~l~C~~Cg~~~~~~ 60 (85)
T 1wii_A 23 QFTCPFCNHEKSCDVKMD-RARNTGVISCTVCLEEFQTP 60 (85)
T ss_dssp CCCCTTTCCSSCEEEEEE-TTTTEEEEEESSSCCEEEEE
T ss_pred eEcCCCCCCCCeEEEEEE-ccCCEEEEEcccCCCeEEec
Confidence 35676 7732 333332 22345677777777765543
No 127
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=38.09 E-value=7.3 Score=24.68 Aligned_cols=13 Identities=31% Similarity=0.933 Sum_probs=10.5
Q ss_pred EEEeCC-CCCceee
Q 034819 20 YTYPCP-CGDLFQI 32 (82)
Q Consensus 20 y~y~CR-CGg~f~i 32 (82)
--+||| ||..|+-
T Consensus 28 ~l~pCRvC~RvfH~ 41 (89)
T 1wil_A 28 SLFPCRVCTRVFHD 41 (89)
T ss_dssp CCSSCSSSSSCCCH
T ss_pred ceeccccccccccH
Confidence 368999 9998873
No 128
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=37.70 E-value=19 Score=20.77 Aligned_cols=30 Identities=40% Similarity=0.937 Sum_probs=14.5
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCCcc
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSCSL 51 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL 51 (82)
.|.|+ ||-.|. +...|.. ++....|+-|..
T Consensus 66 ~~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~C~~C~~ 102 (124)
T 2dlq_A 66 VFTCSVCQETFR-RRMELRLHMVSHTGEMPYKCSSCSQ 102 (124)
T ss_dssp CEECSSSCCEES-SHHHHHHHHHHHSSSCSEECSSSCC
T ss_pred CeECCCCCCccC-CHHHHHHHHHHcCCCCCccCCCccc
Confidence 35565 665554 3333321 334456666654
No 129
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.61 E-value=10 Score=17.15 Aligned_cols=11 Identities=45% Similarity=1.023 Sum_probs=8.7
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
.|.|. ||-.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elr_A 9 THLCDMCGKKFK 20 (36)
T ss_dssp SCBCTTTCCBCS
T ss_pred CeecCcCCCCcC
Confidence 47897 998886
No 130
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=37.43 E-value=12 Score=25.76 Aligned_cols=9 Identities=33% Similarity=1.043 Sum_probs=6.7
Q ss_pred EEeCC-CCCc
Q 034819 21 TYPCP-CGDL 29 (82)
Q Consensus 21 ~y~CR-CGg~ 29 (82)
-|.|| ||..
T Consensus 177 rhhCr~CG~v 186 (220)
T 1dvp_A 177 KHHCRNCGQV 186 (220)
T ss_dssp CEECTTTCCE
T ss_pred ccccCCcCCE
Confidence 48898 9853
No 131
>1i7f_A Heat shock protein 33; HSP33, redox sensitive molecular chaperone, chaperone; 2.70A {Escherichia coli} SCOP: d.193.1.1 PDB: 1xjh_A
Probab=37.38 E-value=7.3 Score=28.66 Aligned_cols=49 Identities=22% Similarity=0.530 Sum_probs=6.2
Q ss_pred ceEEEeCCCC-C-----ceeeehhhhhc-----CceEEEcCCCcceEEEEeecccccccccc
Q 034819 18 QAYTYPCPCG-D-----LFQITKDELRI-----GEEIARCPSCSLYITVIYNIEDFLDNKSK 68 (82)
Q Consensus 18 ~~y~y~CRCG-g-----~f~i~~~~Le~-----g~~iv~C~sCSL~I~V~~~~~~~~e~~~~ 68 (82)
....|.|+|. . .-.+.++++++ |..-+.|.-|+-. =.|+.+++.+..+.
T Consensus 224 ~~v~f~C~CSrer~~~aL~slg~~El~~mi~e~g~iev~C~FC~~~--Y~F~~~dl~~l~~~ 283 (292)
T 1i7f_A 224 QDVEFKCTCSRERSADALKTLPDEEVDSILAEDGEIDMHCDYCGNH--YLFNAMDIAEIRNN 283 (292)
T ss_dssp CCCCCCCC------------------------------------------------------
T ss_pred CCCCeeCCCCHHHHHHHHHhCCHHHHHHHHHcCCCEEEEeeCCCCE--EEeCHHHHHHHHHh
Confidence 4568999998 2 23456666653 4578999999954 45677777666544
No 132
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.13 E-value=14 Score=18.03 Aligned_cols=17 Identities=29% Similarity=0.827 Sum_probs=11.5
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2em2_A 12 PFKCKECGKAFR-QNIHLA 29 (46)
T ss_dssp SEECSSSCCEES-SHHHHH
T ss_pred CEECCcCCchhC-CHHHHH
Confidence 47897 998887 344443
No 133
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.81 E-value=14 Score=16.92 Aligned_cols=12 Identities=33% Similarity=0.830 Sum_probs=9.3
Q ss_pred EEeCC-CCCceee
Q 034819 21 TYPCP-CGDLFQI 32 (82)
Q Consensus 21 ~y~CR-CGg~f~i 32 (82)
.|.|. ||-.|.-
T Consensus 9 ~~~C~~C~k~f~~ 21 (37)
T 2elp_A 9 AMKCPYCDFYFMK 21 (37)
T ss_dssp CEECSSSSCEECS
T ss_pred CeECCCCChhhcc
Confidence 47897 9988874
No 134
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=36.62 E-value=13 Score=22.49 Aligned_cols=10 Identities=40% Similarity=1.148 Sum_probs=7.3
Q ss_pred EEeCC-CCCce
Q 034819 21 TYPCP-CGDLF 30 (82)
Q Consensus 21 ~y~CR-CGg~f 30 (82)
-|.|| ||..|
T Consensus 36 rhhCr~CG~v~ 46 (90)
T 3t7l_A 36 RHHCRACGKVF 46 (90)
T ss_dssp CEECTTTCCEE
T ss_pred CccccCCCCEE
Confidence 48898 98644
No 135
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=36.15 E-value=13 Score=24.11 Aligned_cols=11 Identities=27% Similarity=0.612 Sum_probs=8.2
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
-|.|| ||..|-
T Consensus 35 kHHCR~CG~ifC 46 (120)
T 1y02_A 35 KQTCLDCKKNFC 46 (120)
T ss_dssp CEECTTTCCEEC
T ss_pred cccCCCCCCeeC
Confidence 38899 997663
No 136
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=35.90 E-value=14 Score=22.50 Aligned_cols=10 Identities=50% Similarity=1.351 Sum_probs=7.4
Q ss_pred EEeCC-CCCce
Q 034819 21 TYPCP-CGDLF 30 (82)
Q Consensus 21 ~y~CR-CGg~f 30 (82)
-|.|| ||..|
T Consensus 25 rHHCR~CG~vf 35 (88)
T 1wfk_A 25 EYGCKNCGRAF 35 (88)
T ss_dssp EEECSSSCCEE
T ss_pred cccCCCCCCEE
Confidence 58898 98644
No 137
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=35.61 E-value=13 Score=25.89 Aligned_cols=8 Identities=38% Similarity=1.099 Sum_probs=6.4
Q ss_pred EEeCC-CCC
Q 034819 21 TYPCP-CGD 28 (82)
Q Consensus 21 ~y~CR-CGg 28 (82)
-|.|| ||.
T Consensus 180 rhHCR~CG~ 188 (226)
T 3zyq_A 180 KHHCRACGQ 188 (226)
T ss_dssp CEECTTTCC
T ss_pred ccccCCCcC
Confidence 48898 985
No 138
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=34.83 E-value=20 Score=19.23 Aligned_cols=15 Identities=20% Similarity=0.629 Sum_probs=12.8
Q ss_pred EEeCCCCCceeeehh
Q 034819 21 TYPCPCGDLFQITKD 35 (82)
Q Consensus 21 ~y~CRCGg~f~i~~~ 35 (82)
+|.|.|..+|.+..+
T Consensus 18 s~~C~C~~Gy~L~~d 32 (51)
T 1kig_L 18 EVRCSCAHGYVLGDD 32 (51)
T ss_dssp EECCCCCTTEEECTT
T ss_pred CeEEeCCCCcEECCC
Confidence 688999999998764
No 139
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=34.50 E-value=17 Score=16.95 Aligned_cols=16 Identities=31% Similarity=0.897 Sum_probs=10.8
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.|.|. ||-.|. ....|
T Consensus 6 ~~~C~~C~k~f~-~~~~L 22 (39)
T 1njq_A 6 SYTCSFCKREFR-SAQAL 22 (39)
T ss_dssp SEECTTTCCEES-SHHHH
T ss_pred ceECCCCCcccC-CHHHH
Confidence 37897 998886 34444
No 140
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=40.27 E-value=8.6 Score=16.47 Aligned_cols=10 Identities=40% Similarity=1.009 Sum_probs=7.2
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 4 ~~C~~C~k~f~ 14 (30)
T 2lvr_A 4 YVCIHCQRQFA 14 (30)
Confidence 6686 887765
No 141
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=33.56 E-value=34 Score=21.29 Aligned_cols=27 Identities=26% Similarity=0.701 Sum_probs=16.8
Q ss_pred EeCC-CCCceeeehhhhhcCceEEEcC-CCcceEEE
Q 034819 22 YPCP-CGDLFQITKDELRIGEEIARCP-SCSLYITV 55 (82)
Q Consensus 22 y~CR-CGg~f~i~~~~Le~g~~iv~C~-sCSL~I~V 55 (82)
++|+ |+..|. .+...++|+ .|.-|.+-
T Consensus 4 ~~C~iC~~p~~-------~~~~mi~Cdd~C~~WfH~ 32 (105)
T 2xb1_A 4 YPCGACRSEVN-------DDQDAILCEASCQKWFHR 32 (105)
T ss_dssp CBCTTTCSBCC-------TTSCEEECTTTTCCEEEG
T ss_pred CCCCCCCCccC-------CCCCEEEecCCccccccc
Confidence 5676 776553 122467776 89888654
No 142
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=33.35 E-value=14 Score=23.50 Aligned_cols=14 Identities=36% Similarity=1.277 Sum_probs=11.0
Q ss_pred ceEEEeCC-CCCcee
Q 034819 18 QAYTYPCP-CGDLFQ 31 (82)
Q Consensus 18 ~~y~y~CR-CGg~f~ 31 (82)
+.|.+.|| ||..|.
T Consensus 48 e~F~FkCP~CgEEFy 62 (95)
T 2k5c_A 48 EEFVFKCPVCGEEFY 62 (95)
T ss_dssp HHSEEECTTTCCEEE
T ss_pred HHHhhcCCCccHHHh
Confidence 46899999 996653
No 143
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=32.99 E-value=33 Score=18.93 Aligned_cols=31 Identities=23% Similarity=0.510 Sum_probs=17.3
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCCcce
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSCSLY 52 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL~ 52 (82)
.|.|+ ||-.|. +...|.. ++....|+-|...
T Consensus 36 ~~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~C~~C~~~ 73 (96)
T 2dmd_A 36 PYKCKTCDYAAA-DSSSLNKHLRIHSDERPFKCQICPYA 73 (96)
T ss_dssp SEECSSSCCEES-SHHHHHHHHHHSCCCCCEECSSSSCE
T ss_pred CEeCCCCCCccC-CHHHHHHHHHHhCCCCCccCCCCCCc
Confidence 46676 776665 3334432 3445677777653
No 144
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.75 E-value=7.6 Score=19.02 Aligned_cols=17 Identities=35% Similarity=0.856 Sum_probs=11.3
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2ytt_A 12 PYQCSECGKSFS-GSYRLT 29 (46)
T ss_dssp TTCCSSSCCCCS-SHHHHH
T ss_pred CeeCCCCCcccC-CHHHHH
Confidence 46787 998887 444443
No 145
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=32.35 E-value=9.6 Score=17.26 Aligned_cols=10 Identities=40% Similarity=1.288 Sum_probs=7.4
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 5686 887775
No 146
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=31.94 E-value=19 Score=16.85 Aligned_cols=17 Identities=35% Similarity=0.890 Sum_probs=11.6
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 11 ~~~C~~C~k~f~-~~~~l~ 28 (42)
T 2epc_A 11 PYLCGQCGKSFT-QRGSLA 28 (42)
T ss_dssp CEECSSSCCEES-SHHHHH
T ss_pred CeECCCCCcccC-CHHHHH
Confidence 47897 998887 344443
No 147
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=31.64 E-value=9.9 Score=27.97 Aligned_cols=29 Identities=28% Similarity=0.444 Sum_probs=0.0
Q ss_pred eCC-CCCceeeehhhhhcC-ceEEEcCCCcc
Q 034819 23 PCP-CGDLFQITKDELRIG-EEIARCPSCSL 51 (82)
Q Consensus 23 ~CR-CGg~f~i~~~~Le~g-~~iv~C~sCSL 51 (82)
.|. |+..|.+....-... ---+-|..||-
T Consensus 377 ~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~ 407 (434)
T 3mpx_A 377 MCMNCGCDFSLTLRRHHCHACGKIVCRNCSR 407 (434)
T ss_dssp -------------------------------
T ss_pred cCCCcCCCCCCcchhhhcccCcCEeehhhCC
Confidence 464 776676553322211 12467888885
No 148
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=31.50 E-value=28 Score=22.18 Aligned_cols=32 Identities=19% Similarity=0.434 Sum_probs=20.5
Q ss_pred EeCC-CCCceeeehhhhhcCceEEEcCCCcceEE
Q 034819 22 YPCP-CGDLFQITKDELRIGEEIARCPSCSLYIT 54 (82)
Q Consensus 22 y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I~ 54 (82)
..|| ||..-.+.++ ...+...+.|..|.-.-.
T Consensus 5 ~FCp~CgnlL~~~~~-~~~~~~~~~C~~C~y~~~ 37 (122)
T 1twf_I 5 RFCRDCNNMLYPRED-KENNRLLFECRTCSYVEE 37 (122)
T ss_dssp CBCSSSCCBCEEEEE-TTTTEEEEECSSSSCEEE
T ss_pred CcccccCccCccccc-CcCCCCEEECCcCCCeee
Confidence 4587 8877766653 223457888888865443
No 149
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=31.16 E-value=35 Score=18.48 Aligned_cols=8 Identities=25% Similarity=0.642 Sum_probs=4.0
Q ss_pred EEEcCCCc
Q 034819 43 IARCPSCS 50 (82)
Q Consensus 43 iv~C~sCS 50 (82)
...|+-|.
T Consensus 62 ~~~C~~C~ 69 (90)
T 1a1h_A 62 PFACDICG 69 (90)
T ss_dssp CEECTTTC
T ss_pred CccCCCCC
Confidence 34555554
No 150
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.15 E-value=21 Score=16.78 Aligned_cols=16 Identities=38% Similarity=0.870 Sum_probs=11.1
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.|.|. ||-.|. +...|
T Consensus 11 ~~~C~~C~k~f~-~~~~L 27 (42)
T 2en2_A 11 PYKCETCGARFV-QVAHL 27 (42)
T ss_dssp SEECTTTCCEES-SHHHH
T ss_pred CEeCCCcChhhC-CHHHH
Confidence 47897 998887 34444
No 151
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.13 E-value=23 Score=19.08 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=21.1
Q ss_pred EEeCC-CCCceeeehhhhhc---------CceEEEcCCCcceE
Q 034819 21 TYPCP-CGDLFQITKDELRI---------GEEIARCPSCSLYI 53 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~---------g~~iv~C~sCSL~I 53 (82)
.|.|. ||-.|.- ...|.. ++....|+-|.-..
T Consensus 7 ~~~C~~C~k~f~~-~~~L~~H~~~h~~~~~~~~~~C~~C~k~f 48 (78)
T 2d9h_A 7 GLQCEICGFTCRQ-KASLNWHQRKHAETVAALRFPCEFCGKRF 48 (78)
T ss_dssp CEECSSSCCEESS-HHHHHHHHHHHHHHTTTCCEECTTTCCEE
T ss_pred CeECCCCCCeeCC-HHHHHHHHHHhhccCCCcccCCCCCCchh
Confidence 47897 9988873 344432 24578999998543
No 152
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=31.04 E-value=20 Score=16.83 Aligned_cols=17 Identities=47% Similarity=1.085 Sum_probs=11.7
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 10 ~~~C~~C~k~f~-~~~~L~ 27 (42)
T 2el5_A 10 PYECSECGKAFN-RKDQLI 27 (42)
T ss_dssp SEECSSSCCEES-SHHHHH
T ss_pred CccCCCcChhhC-CHHHHH
Confidence 47897 998887 444443
No 153
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.99 E-value=20 Score=16.79 Aligned_cols=17 Identities=41% Similarity=0.997 Sum_probs=11.6
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 10 ~~~C~~C~k~f~-~~~~L~ 27 (41)
T 2ept_A 10 VYECQECGKSFR-QKGSLT 27 (41)
T ss_dssp CEECSSSCCEES-SHHHHH
T ss_pred CeECCCCCCCcC-CHHHHH
Confidence 57897 998887 344443
No 154
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.46 E-value=23 Score=19.05 Aligned_cols=31 Identities=32% Similarity=0.797 Sum_probs=20.6
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCCcce
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSCSLY 52 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL~ 52 (82)
.|.|. ||-.|. +...|.. ++....|+-|...
T Consensus 18 ~~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~C~~C~~~ 55 (77)
T 2cot_A 18 RYKCDECGKSFS-HSSDLSKHRRTHTGEKPYKCDECGKA 55 (77)
T ss_dssp SSBCSSSCCBCS-CHHHHHHHHTTTCCSCSEECSSSCCE
T ss_pred CEECCCCCcccC-CHHHHHHHHHHcCCCcCeeCCCCCCc
Confidence 57787 998887 3444432 3456789988753
No 155
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=30.40 E-value=43 Score=18.40 Aligned_cols=28 Identities=25% Similarity=0.596 Sum_probs=18.5
Q ss_pred EEEeCC-CC-CceeeehhhhhcCceEEEcCCCcceE
Q 034819 20 YTYPCP-CG-DLFQITKDELRIGEEIARCPSCSLYI 53 (82)
Q Consensus 20 y~y~CR-CG-g~f~i~~~~Le~g~~iv~C~sCSL~I 53 (82)
....|| || +.|.... .....|..|.+..
T Consensus 18 ~~k~CP~CG~~~fm~~~------~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 18 KNKFCPRCGPGVFMADH------GDRWACGKCGYTE 47 (50)
T ss_dssp SSEECSSSCSSCEEEEC------SSEEECSSSCCEE
T ss_pred ecccCCCCCCceEEecC------CCeEECCCCCCEE
Confidence 456797 99 4565432 2457899998753
No 156
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.01 E-value=21 Score=17.17 Aligned_cols=18 Identities=39% Similarity=0.870 Sum_probs=12.3
Q ss_pred EEEeCC-CCCceeeehhhhh
Q 034819 20 YTYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le 38 (82)
-.|.|. ||-.|. ....|.
T Consensus 11 ~~~~C~~C~k~F~-~~~~L~ 29 (46)
T 2emi_A 11 RHYECSECGKAFI-QKSTLS 29 (46)
T ss_dssp CCEECSSSCCEES-SHHHHH
T ss_pred CCCCCCCCCcccC-CHHHHH
Confidence 357897 998887 444444
No 157
>1vq0_A 33 kDa chaperonin; TM1394, joint center for structural genomics, protein structure initiative, PSI, chaperone; HET: UNL; 2.20A {Thermotoga maritima} SCOP: d.193.1.1 g.81.1.1
Probab=29.65 E-value=25 Score=25.99 Aligned_cols=45 Identities=22% Similarity=0.476 Sum_probs=29.9
Q ss_pred ceEEEeCCCCC------ceeeehhhhh-----cCceEEEcCCCcceEEEEeeccccccc
Q 034819 18 QAYTYPCPCGD------LFQITKDELR-----IGEEIARCPSCSLYITVIYNIEDFLDN 65 (82)
Q Consensus 18 ~~y~y~CRCGg------~f~i~~~~Le-----~g~~iv~C~sCSL~I~V~~~~~~~~e~ 65 (82)
....|.|+|.. .-.+.+++++ +| .-+.|.-|+-. =.|+.+++.+.
T Consensus 237 ~~v~f~C~CSreR~~~aL~sLg~~El~~mi~e~g-iev~C~FC~~~--Y~F~~~dl~~l 292 (302)
T 1vq0_A 237 AEIKYKCDCNREKAKNALLVLDKKELEDMRKEGK-GEVVCKWCNTR--YVFSEEELEEL 292 (302)
T ss_dssp EECEECCCCCHHHHHHHHHTSCHHHHHHHHHHTC-EEEECTTTCCE--EEECHHHHHHH
T ss_pred CcCCccCCCCHHHHHHHHHhCCHHHHHHHHHcCC-cEEEeeCCCCE--EEeCHHHHHHH
Confidence 45688999982 2346666664 37 99999999954 34455555443
No 158
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=29.63 E-value=11 Score=18.26 Aligned_cols=28 Identities=39% Similarity=0.780 Sum_probs=16.9
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 10 ~~~C~~C~k~f~-~~~~l~~H~~~H~~~~~~~C~~c 44 (45)
T 2epq_A 10 PYSCPVCGLRFK-RKDRMSYHVRSHDGSVGKSGPSS 44 (45)
T ss_dssp SSEETTTTEECS-CHHHHHHHHHHHSCCCCCCCCCC
T ss_pred CCcCCCCCcccC-CHHHHHHHHHHccCCCCCCCcCC
Confidence 47787 998875 3444432 3445666665
No 159
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.52 E-value=22 Score=17.06 Aligned_cols=16 Identities=44% Similarity=0.872 Sum_probs=11.1
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.|.|. ||-.|. ....|
T Consensus 12 ~~~C~~C~k~F~-~~~~L 28 (44)
T 2epv_A 12 PYECNECGKAFI-WKSLL 28 (44)
T ss_dssp SEECSSSCCEES-SHHHH
T ss_pred CeECCCCCcccC-chHHH
Confidence 57897 998886 34444
No 160
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=29.37 E-value=15 Score=16.67 Aligned_cols=10 Identities=40% Similarity=1.288 Sum_probs=7.7
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 3 ~~C~~C~k~F~ 13 (33)
T 1rim_A 3 FACPECPKRFM 13 (33)
T ss_dssp CCCSSSCCCCS
T ss_pred ccCCCCCchhC
Confidence 5686 988876
No 161
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=29.32 E-value=30 Score=18.33 Aligned_cols=13 Identities=38% Similarity=1.012 Sum_probs=9.1
Q ss_pred EEeC-CCCCceeee
Q 034819 21 TYPC-PCGDLFQIT 33 (82)
Q Consensus 21 ~y~C-RCGg~f~i~ 33 (82)
.+.| |||-.+.+.
T Consensus 9 ~~~C~~C~~~i~~~ 22 (39)
T 2i5o_A 9 QVPCEKCGSLVPVW 22 (39)
T ss_dssp EEECTTTCCEEEGG
T ss_pred CcccccccCcCCcc
Confidence 5678 598777753
No 162
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=29.29 E-value=20 Score=19.45 Aligned_cols=15 Identities=20% Similarity=0.640 Sum_probs=12.6
Q ss_pred EEeCCCCCceeeehh
Q 034819 21 TYPCPCGDLFQITKD 35 (82)
Q Consensus 21 ~y~CRCGg~f~i~~~ 35 (82)
+|.|.|..+|.+..+
T Consensus 20 s~~C~C~~Gy~L~~D 34 (53)
T 2bz6_L 20 KRSCRCHEGYSLLAD 34 (53)
T ss_dssp EEEEECCTTEEECTT
T ss_pred CEEeeCCCCCEECCC
Confidence 578999999998754
No 163
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=29.20 E-value=31 Score=19.73 Aligned_cols=31 Identities=32% Similarity=0.649 Sum_probs=17.6
Q ss_pred EEeCC-CCCceeeehhhhhc------CceEEEcCCCcce
Q 034819 21 TYPCP-CGDLFQITKDELRI------GEEIARCPSCSLY 52 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCSL~ 52 (82)
.|.|+ ||-.|. +...|.. ++....|+-|...
T Consensus 37 ~~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~C~~C~~~ 74 (110)
T 2csh_A 37 PYGCGVCGKKFK-MKHHLVGHMKIHTGIKPYECNICAKR 74 (110)
T ss_dssp SEECTTTSCEES-SSHHHHHHHTTTCCCCCEECSSSCCE
T ss_pred CccCCCCCcccC-CHHHHHHHHHHcCCCCCeeCCCCcch
Confidence 36676 776665 3333332 3445677777654
No 164
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=29.16 E-value=23 Score=25.26 Aligned_cols=33 Identities=18% Similarity=0.420 Sum_probs=19.6
Q ss_pred eEEEeCC-CCCceeeehhhhhcCceEEEcCCCcce
Q 034819 19 AYTYPCP-CGDLFQITKDELRIGEEIARCPSCSLY 52 (82)
Q Consensus 19 ~y~y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~ 52 (82)
.-.|.|+ ||..+.+.... ..-..-..|++|...
T Consensus 132 ~~~f~C~~C~~~~~v~~~~-~~~~~P~~Cp~C~~~ 165 (279)
T 1ltl_A 132 KAVFECRGCMRHHAVTQST-NMITEPSLCSECGGR 165 (279)
T ss_dssp EEEEEETTTCCEEEEECSS-SSCCCCSCCTTTCCC
T ss_pred EEEEEcCCCCCEEEEEecC-CcccCCCcCCCCCCC
Confidence 4568897 99665544331 111234579999864
No 165
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=29.10 E-value=20 Score=19.38 Aligned_cols=15 Identities=13% Similarity=0.645 Sum_probs=12.4
Q ss_pred EEeCCCCCceeeehh
Q 034819 21 TYPCPCGDLFQITKD 35 (82)
Q Consensus 21 ~y~CRCGg~f~i~~~ 35 (82)
+|.|.|-.+|.+..+
T Consensus 21 sy~C~C~~Gy~L~~d 35 (55)
T 2jkh_L 21 SVVCSCARGYTLADN 35 (55)
T ss_dssp EEEEECCTTEEECTT
T ss_pred CeEEeCCCCCEECCC
Confidence 678999999998754
No 166
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=29.04 E-value=18 Score=16.97 Aligned_cols=17 Identities=41% Similarity=0.931 Sum_probs=11.8
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 11 ~~~C~~C~k~f~-~~~~L~ 28 (42)
T 2ytb_A 11 PYRCDQCGKAFS-QKGSLI 28 (42)
T ss_dssp SBCCTTTTCCBS-SHHHHH
T ss_pred CeeCCCccchhC-CHHHHH
Confidence 47897 998887 444554
No 167
>1vzy_A 33 kDa chaperonin; chaperone, heat shock protein, crystal engineering, molecular chaperone, redox-active center, PSI; 1.97A {Bacillus subtilis} SCOP: d.193.1.1 g.81.1.1
Probab=29.02 E-value=22 Score=26.02 Aligned_cols=45 Identities=22% Similarity=0.583 Sum_probs=29.5
Q ss_pred ceEEEeCCCCC------ceeeehhhhhc-----CceEEEcCCCcceEEEEeecccccc
Q 034819 18 QAYTYPCPCGD------LFQITKDELRI-----GEEIARCPSCSLYITVIYNIEDFLD 64 (82)
Q Consensus 18 ~~y~y~CRCGg------~f~i~~~~Le~-----g~~iv~C~sCSL~I~V~~~~~~~~e 64 (82)
....|.|+|.. .-.+.++++++ |..-+.|.-|+-. =.|+.+++.+
T Consensus 229 ~~v~f~C~CSrer~~~~L~slg~~El~~mi~e~g~iev~C~FC~~~--Y~f~~~dl~~ 284 (291)
T 1vzy_A 229 MPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEK--YLFTKEELEG 284 (291)
T ss_dssp EECEECCCCCHHHHHHHHHTTCHHHHHHHHHHHSEEEEECTTTCCE--EEEEHHHHHH
T ss_pred cccCccCCCCHHHHHHHHHhCCHHHHHHHHHcCCCEEEEeeCCCCE--EEeCHHHHHH
Confidence 34678999982 23456666643 6789999999954 3445555543
No 168
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.74 E-value=10 Score=17.36 Aligned_cols=11 Identities=45% Similarity=1.364 Sum_probs=8.5
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
.|.|. ||-.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (37)
T 2elo_A 9 SYSCPVCEKSFS 20 (37)
T ss_dssp CCEETTTTEECS
T ss_pred CcCCCCCCCccC
Confidence 47897 998776
No 169
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.45 E-value=24 Score=16.76 Aligned_cols=16 Identities=31% Similarity=0.872 Sum_probs=11.1
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.|.|. ||-.|. ....|
T Consensus 12 ~~~C~~C~k~f~-~~~~L 28 (44)
T 2emb_A 12 RYECSKCQATFN-LRKHL 28 (44)
T ss_dssp SEECTTTCCEES-CHHHH
T ss_pred CeECCCCCCccC-CHHHH
Confidence 47897 998887 34444
No 170
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.15 E-value=18 Score=17.04 Aligned_cols=17 Identities=41% Similarity=1.097 Sum_probs=11.6
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 11 ~~~C~~C~k~f~-~~~~L~ 28 (42)
T 2eos_A 11 PYPCEICGTRFR-HLQTLK 28 (42)
T ss_dssp CBCCSSSCCCBS-SHHHHH
T ss_pred CEECCCCCCccC-CHHHHH
Confidence 57897 998887 444443
No 171
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=28.11 E-value=22 Score=18.92 Aligned_cols=28 Identities=21% Similarity=0.514 Sum_probs=17.8
Q ss_pred EEeCC-CCC-ceeeehhhhhcCceEEEcCCCcceE
Q 034819 21 TYPCP-CGD-LFQITKDELRIGEEIARCPSCSLYI 53 (82)
Q Consensus 21 ~y~CR-CGg-~f~i~~~~Le~g~~iv~C~sCSL~I 53 (82)
.+.|| ||+ ......+ . ..+-|..|-|.+
T Consensus 5 ~~~CP~C~~~~l~~d~~---~--gelvC~~CG~v~ 34 (50)
T 1pft_A 5 QKVCPACESAELIYDPE---R--GEIVCAKCGYVI 34 (50)
T ss_dssp CCSCTTTSCCCEEEETT---T--TEEEESSSCCBC
T ss_pred cEeCcCCCCcceEEcCC---C--CeEECcccCCcc
Confidence 35798 998 4444321 2 236899998876
No 172
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.04 E-value=13 Score=21.07 Aligned_cols=17 Identities=29% Similarity=0.636 Sum_probs=13.2
Q ss_pred EEEeCC-CCCceeeehhh
Q 034819 20 YTYPCP-CGDLFQITKDE 36 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~ 36 (82)
-.|.|+ |+-.|.+.+..
T Consensus 11 ~~~~CPrCn~~f~~~~sL 28 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEAL 28 (49)
T ss_dssp SCCCCTTTCCCCSSHHHH
T ss_pred CceeCCcccccccchHHH
Confidence 478996 99999876653
No 173
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=27.99 E-value=21 Score=27.58 Aligned_cols=28 Identities=25% Similarity=0.708 Sum_probs=18.6
Q ss_pred CceeccCCceEEEeCC-CCCceeeehhhhhcCceEEEcC--CCc
Q 034819 10 DMEWNEELQAYTYPCP-CGDLFQITKDELRIGEEIARCP--SCS 50 (82)
Q Consensus 10 Dm~~~e~~~~y~y~CR-CGg~f~i~~~~Le~g~~iv~C~--sCS 50 (82)
.|.+++++ |...|| ||+ |..++.|+ +|+
T Consensus 84 ~f~~D~DG--~~~yCr~C~~-----------Gg~l~~Cdn~~C~ 114 (386)
T 2pv0_B 84 LFLYDDDG--YQSYCSICCS-----------GETLLICGNPDCT 114 (386)
T ss_dssp TTCBCSSS--SBCSCTTTCC-----------CSSCEECCSTTCC
T ss_pred CcccCCCC--CcccceEcCC-----------CCeEEEeCCCCCC
Confidence 44555443 566799 985 34678899 777
No 174
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.76 E-value=25 Score=16.80 Aligned_cols=17 Identities=35% Similarity=0.948 Sum_probs=11.8
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2eor_A 12 PYNCEECGKAFI-HDSQLQ 29 (46)
T ss_dssp SEECTTTCCEES-SHHHHH
T ss_pred CccCCCCCCCcC-CHHHHH
Confidence 47897 998887 444443
No 175
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=27.73 E-value=31 Score=18.99 Aligned_cols=10 Identities=60% Similarity=1.587 Sum_probs=4.6
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|+ ||-.|.
T Consensus 36 ~~C~~C~~~f~ 46 (95)
T 2yt9_A 36 YSCPVCGLRFK 46 (95)
T ss_dssp EECSSSCCEES
T ss_pred CcCCCCCCccC
Confidence 4454 554444
No 176
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.69 E-value=25 Score=16.82 Aligned_cols=17 Identities=35% Similarity=1.003 Sum_probs=11.6
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2eow_A 12 PYKCNECGKAFR-ARSSLA 29 (46)
T ss_dssp CEECTTSCCEES-SHHHHH
T ss_pred CeeccccCChhc-CHHHHH
Confidence 47897 998887 344443
No 177
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.31 E-value=25 Score=16.80 Aligned_cols=18 Identities=39% Similarity=0.811 Sum_probs=12.1
Q ss_pred EEEeCC-CCCceeeehhhhh
Q 034819 20 YTYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le 38 (82)
-.|.|. ||-.|. ....|.
T Consensus 11 k~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2yts_A 11 KPYICNECGKSFI-QKSHLN 29 (46)
T ss_dssp CSEECSSSCCEES-SHHHHH
T ss_pred cCEECCCCChhhC-ChHHHH
Confidence 357897 998887 444443
No 178
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=27.16 E-value=59 Score=18.37 Aligned_cols=26 Identities=15% Similarity=0.742 Sum_probs=18.2
Q ss_pred EeCCCCCceeeehhhhhcCceEEEcCC--CcceEEE
Q 034819 22 YPCPCGDLFQITKDELRIGEEIARCPS--CSLYITV 55 (82)
Q Consensus 22 y~CRCGg~f~i~~~~Le~g~~iv~C~s--CSL~I~V 55 (82)
-.|.||... ++...++|++ |..|-+.
T Consensus 11 v~C~C~~~~--------~~g~mI~CD~~~C~~W~H~ 38 (68)
T 2rsd_A 11 VRCICSSTM--------VNDSMIQCEDQRCQVWQHL 38 (68)
T ss_dssp ECCTTCCCS--------CCSCEEECSCTTTCEEEET
T ss_pred EEeECCCCc--------CCCCEEEECCCCCCCeEch
Confidence 349998431 2236899996 9988775
No 179
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.11 E-value=25 Score=16.71 Aligned_cols=12 Identities=25% Similarity=0.963 Sum_probs=9.5
Q ss_pred EEeCC-CCCceee
Q 034819 21 TYPCP-CGDLFQI 32 (82)
Q Consensus 21 ~y~CR-CGg~f~i 32 (82)
.|.|. ||-.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (44)
T 2yu5_A 12 PFKCSKCDRVFTQ 24 (44)
T ss_dssp SEECSSSSCEESS
T ss_pred CeECCCCCchhCC
Confidence 47897 9988874
No 180
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.08 E-value=26 Score=16.91 Aligned_cols=12 Identities=25% Similarity=0.849 Sum_probs=9.4
Q ss_pred EEeCC-CCCceee
Q 034819 21 TYPCP-CGDLFQI 32 (82)
Q Consensus 21 ~y~CR-CGg~f~i 32 (82)
.|.|. ||-.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eoy_A 12 CFKCNKCEKTFSC 24 (46)
T ss_dssp CEECSSSCCEESS
T ss_pred CEECcCCCCcCCC
Confidence 47897 9988873
No 181
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.96 E-value=27 Score=16.45 Aligned_cols=17 Identities=41% Similarity=0.880 Sum_probs=11.6
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. +...|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (44)
T 2eof_A 12 PYECNECQKAFN-TKSNLM 29 (44)
T ss_dssp SEECTTTCCEES-CHHHHH
T ss_pred CeECCCCCcccC-CHhHHH
Confidence 47897 998887 444443
No 182
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.96 E-value=26 Score=16.83 Aligned_cols=17 Identities=35% Similarity=0.847 Sum_probs=11.9
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~F~-~~~~L~ 29 (46)
T 2em3_A 12 PYECKVCSKAFT-QKAHLA 29 (46)
T ss_dssp SEECSSSCCEES-SHHHHH
T ss_pred CeECCCCCcccC-CHHHHH
Confidence 47897 998887 444454
No 183
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=26.77 E-value=35 Score=26.72 Aligned_cols=27 Identities=15% Similarity=0.490 Sum_probs=19.7
Q ss_pred EeCCCCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 22 YPCPCGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 22 y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
..|-||..+ ..+...++|+.|.-|-+.
T Consensus 38 ~yC~C~~~~-------d~~~~MIqCd~C~~WfH~ 64 (488)
T 3kv5_D 38 VYCVCRQPY-------DVNRFMIECDICKDWFHG 64 (488)
T ss_dssp EETTTTEEC-------CTTSCEEEBTTTCCEEEH
T ss_pred eEEeCCCcC-------CCCCCeEEccCCCCceee
Confidence 349999655 224578999999988764
No 184
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.70 E-value=26 Score=16.87 Aligned_cols=18 Identities=39% Similarity=0.857 Sum_probs=12.5
Q ss_pred EEEeCC-CCCceeeehhhhh
Q 034819 20 YTYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le 38 (82)
-.|.|. ||-.|. ....|.
T Consensus 11 k~~~C~~C~k~F~-~~~~L~ 29 (46)
T 2ytp_A 11 RHYECSECGKAFA-RKSTLI 29 (46)
T ss_dssp CCEECSSSCCEES-SHHHHH
T ss_pred CCeECCcCCcccC-CHHHHH
Confidence 357897 998887 445554
No 185
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=26.69 E-value=27 Score=17.44 Aligned_cols=11 Identities=36% Similarity=1.271 Sum_probs=8.8
Q ss_pred EEeCC-CCCcee
Q 034819 21 TYPCP-CGDLFQ 31 (82)
Q Consensus 21 ~y~CR-CGg~f~ 31 (82)
-|.|. ||-.|.
T Consensus 7 p~~C~~C~k~F~ 18 (48)
T 3iuf_A 7 PYACDICGKRYK 18 (48)
T ss_dssp CEECTTTCCEES
T ss_pred CEECCCcCcccC
Confidence 47797 998886
No 186
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.59 E-value=20 Score=16.74 Aligned_cols=17 Identities=29% Similarity=0.872 Sum_probs=11.6
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 10 ~~~C~~C~k~f~-~~~~L~ 27 (42)
T 2yte_A 10 PYSCAECKETFS-DNNRLV 27 (42)
T ss_dssp SCBCTTTCCBCS-SHHHHH
T ss_pred CeECCCCCCccC-CHHHHH
Confidence 47897 998887 444443
No 187
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=26.58 E-value=27 Score=17.66 Aligned_cols=12 Identities=25% Similarity=0.747 Sum_probs=9.4
Q ss_pred EEEeCC-CCCcee
Q 034819 20 YTYPCP-CGDLFQ 31 (82)
Q Consensus 20 y~y~CR-CGg~f~ 31 (82)
-.|.|. ||-.|.
T Consensus 23 k~~~C~~C~k~f~ 35 (54)
T 1yui_A 23 QPATCPICYAVIR 35 (54)
T ss_dssp CCEECTTTCCEES
T ss_pred CCccCCCCCcccC
Confidence 357897 998886
No 188
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.56 E-value=27 Score=16.72 Aligned_cols=18 Identities=33% Similarity=0.754 Sum_probs=12.2
Q ss_pred EEEeCC-CCCceeeehhhhh
Q 034819 20 YTYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le 38 (82)
-.|.|. ||-.|. ....|.
T Consensus 11 k~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2ytf_A 11 KPFECSECQKAFN-TKSNLI 29 (46)
T ss_dssp CSEECSSSCCEES-SHHHHH
T ss_pred CCcCCCCCCcccC-CHHHHH
Confidence 357897 998887 444443
No 189
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=26.56 E-value=26 Score=16.90 Aligned_cols=17 Identities=29% Similarity=0.888 Sum_probs=11.8
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~F~-~~~~L~ 29 (46)
T 2emj_A 12 PFECAECGKSFS-ISSQLA 29 (46)
T ss_dssp SEECSSSSCEES-SHHHHH
T ss_pred CEECCCCCcccC-CHHHHH
Confidence 57897 998887 444443
No 190
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.40 E-value=27 Score=16.83 Aligned_cols=17 Identities=47% Similarity=0.983 Sum_probs=11.5
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2em4_A 12 PYECIECGKAFK-TKSSLI 29 (46)
T ss_dssp SEECSSSCCEES-SHHHHH
T ss_pred CcCCCCCCCccC-CHHHHH
Confidence 47897 998887 344443
No 191
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=26.25 E-value=43 Score=21.10 Aligned_cols=10 Identities=60% Similarity=1.693 Sum_probs=4.8
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|+ ||-.|.
T Consensus 106 ~~C~~C~~~f~ 116 (190)
T 2i13_A 106 YACPECGKSFS 116 (190)
T ss_dssp EECTTTCCEES
T ss_pred CcCCCCCCccC
Confidence 4454 554444
No 192
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=26.18 E-value=30 Score=18.62 Aligned_cols=31 Identities=26% Similarity=0.639 Sum_probs=19.0
Q ss_pred EEeCC-CCCceeeehhhhhc------Cc----eEEEcCCCcce
Q 034819 21 TYPCP-CGDLFQITKDELRI------GE----EIARCPSCSLY 52 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~------g~----~iv~C~sCSL~ 52 (82)
.|.|. ||-.|.- ...|.. +. ....|+.|.-.
T Consensus 15 ~~~C~~C~~~f~~-~~~l~~H~~~~~~~~~~~~~~~C~~C~~~ 56 (86)
T 1x6h_A 15 PYACSHCDKTFRQ-KQLLDMHFKRYHDPNFVPAAFVCSKCGKT 56 (86)
T ss_dssp CEECSSSSCEESS-HHHHHHHHHHTTCSSCCCCCEECSSSCCE
T ss_pred CCcCCCCCCccCC-HHHHHHHHHHhcCCcCCCcceECCCCCCh
Confidence 47787 8887763 333332 11 45788888754
No 193
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.46 E-value=29 Score=16.65 Aligned_cols=12 Identities=33% Similarity=0.927 Sum_probs=9.4
Q ss_pred EEeCC-CCCceee
Q 034819 21 TYPCP-CGDLFQI 32 (82)
Q Consensus 21 ~y~CR-CGg~f~i 32 (82)
.|.|. ||-.|.-
T Consensus 12 ~~~C~~C~k~F~~ 24 (46)
T 2en3_A 12 PFQCKECGMNFSW 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeeCcccChhhCC
Confidence 47897 9988873
No 194
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=25.27 E-value=50 Score=18.81 Aligned_cols=10 Identities=20% Similarity=0.657 Sum_probs=5.1
Q ss_pred eEEEcCCCcc
Q 034819 42 EIARCPSCSL 51 (82)
Q Consensus 42 ~iv~C~sCSL 51 (82)
....|+.|..
T Consensus 65 ~~~~C~~C~~ 74 (119)
T 2jp9_A 65 KPFQCKTCQR 74 (119)
T ss_dssp CCEECTTTCC
T ss_pred CCccCCccCc
Confidence 3455555543
No 195
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.19 E-value=29 Score=16.55 Aligned_cols=18 Identities=39% Similarity=0.862 Sum_probs=12.0
Q ss_pred EEEeCC-CCCceeeehhhhh
Q 034819 20 YTYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le 38 (82)
-.|.|. ||-.|. ....|.
T Consensus 11 ~~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2yrj_A 11 KPYRCGECGKAFA-QKANLT 29 (46)
T ss_dssp CCEECSSSCCEES-SHHHHH
T ss_pred CCeECCCCCCccC-CHHHHH
Confidence 357897 998887 344443
No 196
>1d4u_A Nucleotide excision repair protein XPA (XPA-MBD); DNA repair, loop-rich domain, relaxation, DNA binding protein; NMR {Homo sapiens} SCOP: a.6.1.2 g.39.1.5 PDB: 1xpa_A
Probab=25.01 E-value=19 Score=23.30 Aligned_cols=27 Identities=26% Similarity=0.567 Sum_probs=19.9
Q ss_pred eCC-CCCceeeehhhhhcCceEEEcCCCcc
Q 034819 23 PCP-CGDLFQITKDELRIGEEIARCPSCSL 51 (82)
Q Consensus 23 ~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL 51 (82)
.|+ ||..|. ...|.+...+.-|++|.-
T Consensus 7 ~C~eC~~~~~--d~~l~~~F~~~VC~~Cr~ 34 (111)
T 1d4u_A 7 ICEECGKEFM--DSYLMDHFDLPTCDDCRD 34 (111)
T ss_dssp ECTTTCCEES--CSSSTTTTSCCCCTTTCS
T ss_pred ccccCCChhh--HHHHHHhCCeeechhhcc
Confidence 487 998763 445666677899999964
No 197
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=25.01 E-value=51 Score=17.73 Aligned_cols=30 Identities=37% Similarity=0.778 Sum_probs=17.9
Q ss_pred EEeCC---CCCceeeehhhhhc------CceEEEcCCCcc
Q 034819 21 TYPCP---CGDLFQITKDELRI------GEEIARCPSCSL 51 (82)
Q Consensus 21 ~y~CR---CGg~f~i~~~~Le~------g~~iv~C~sCSL 51 (82)
.|.|+ ||..|. +...|.. ++....|+.|.-
T Consensus 35 ~~~C~~~~C~~~f~-~~~~l~~H~~~h~~~~~~~C~~C~~ 73 (89)
T 2wbs_A 35 PYHCDWDGCGWKFA-RSDELTRHYRKHTGHRPFQCQKCDR 73 (89)
T ss_dssp CEECCSTTTCCEES-SHHHHHHHHHHHHCCCCEECSSSSC
T ss_pred CcCCCCCCCCCccC-CHHHHHHHHHHcCCCCCccCCCCCc
Confidence 46775 777776 3444432 445677777764
No 198
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=24.94 E-value=24 Score=18.34 Aligned_cols=14 Identities=21% Similarity=0.738 Sum_probs=11.2
Q ss_pred EEeCCCCCceeeeh
Q 034819 21 TYPCPCGDLFQITK 34 (82)
Q Consensus 21 ~y~CRCGg~f~i~~ 34 (82)
+|.|.|-.+|.+..
T Consensus 32 sy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 32 GYFCSCRPGYELQE 45 (53)
T ss_dssp EEEEECSTTCEECT
T ss_pred CeEEECCCCCeECC
Confidence 57899998998754
No 199
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.48 E-value=23 Score=17.06 Aligned_cols=17 Identities=35% Similarity=0.960 Sum_probs=11.9
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~F~-~~~~L~ 29 (46)
T 2enf_A 12 PYKCNECGKVFT-QNSHLV 29 (46)
T ss_dssp SCBCSSSCCBCS-SHHHHH
T ss_pred CeECCCCCcccC-CHHHHH
Confidence 47897 998887 444443
No 200
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.43 E-value=20 Score=16.93 Aligned_cols=16 Identities=44% Similarity=1.022 Sum_probs=10.9
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.|.|. ||-.|. ....|
T Consensus 12 ~~~C~~C~k~f~-~~~~L 28 (44)
T 2en7_A 12 PYVCNECGKAFR-SKSYL 28 (44)
T ss_dssp SSCCTTTCCCCS-SHHHH
T ss_pred CeECCCCCCccC-CHHHH
Confidence 47797 998887 34444
No 201
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=24.15 E-value=59 Score=24.67 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=22.4
Q ss_pred EeCC-CCCc---eee-------ehhhhhcC---ceEEEcCCCcceEEE
Q 034819 22 YPCP-CGDL---FQI-------TKDELRIG---EEIARCPSCSLYITV 55 (82)
Q Consensus 22 y~CR-CGg~---f~i-------~~~~Le~g---~~iv~C~sCSL~I~V 55 (82)
-+|. ||+. ... +.+++..| ..+..|.+|.-.++.
T Consensus 120 p~C~~Cg~~~~~~~~~~g~~~p~~~E~~~ga~~vE~y~C~~C~~~~rF 167 (335)
T 1x3z_A 120 PDCNHCGQNTSENMTPLGSQGPNGEESKFNCGTVEIYKCNRCGNITRF 167 (335)
T ss_dssp CCCSSSCSSCCSSEEEEEEECCCSGGGSSSEEEEEEEEETTTCCEEEE
T ss_pred CCccccCCCccccccccCCCCCChhhhccCCceEEEeecCCCCccccc
Confidence 4796 9953 111 34555555 457789999998886
No 202
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=24.08 E-value=81 Score=17.47 Aligned_cols=34 Identities=26% Similarity=0.588 Sum_probs=17.2
Q ss_pred CceeccCCceEEEeCCCCCceeeehhhhhcCceEEEcCC--Cc-ceEEE
Q 034819 10 DMEWNEELQAYTYPCPCGDLFQITKDELRIGEEIARCPS--CS-LYITV 55 (82)
Q Consensus 10 Dm~~~e~~~~y~y~CRCGg~f~i~~~~Le~g~~iv~C~s--CS-L~I~V 55 (82)
|+..+.++.. .|-|++.. .| .++.|++ |. -|.+.
T Consensus 2 ~~~~d~~e~~---~C~C~~~~--------~g-~mi~CD~cdC~~~wfH~ 38 (60)
T 2vnf_A 2 DMPVDPNEPT---YCLCHQVS--------YG-EMIGCDNPDCSIEWFHF 38 (60)
T ss_dssp -------CCE---ETTTTEEC--------CS-EEEECSCTTCSSCEEET
T ss_pred CcccCCCCCC---EEECCCcC--------CC-CEEEeCCCCCCCceEeh
Confidence 3444555443 37787532 13 6899999 77 57554
No 203
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=23.96 E-value=38 Score=22.57 Aligned_cols=16 Identities=19% Similarity=0.405 Sum_probs=12.1
Q ss_pred CceEEEcCCCcceEEE
Q 034819 40 GEEIARCPSCSLYITV 55 (82)
Q Consensus 40 g~~iv~C~sCSL~I~V 55 (82)
|..++.|++|+-.-++
T Consensus 72 GG~LlcCD~Cpr~Fh~ 87 (142)
T 2lbm_A 72 GGNLICCDFCHNAFCK 87 (142)
T ss_dssp CSSEEECSSSCCEEEH
T ss_pred CCcEEeCCCCCCeeeH
Confidence 4467899999877655
No 204
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=23.90 E-value=23 Score=19.74 Aligned_cols=15 Identities=13% Similarity=0.693 Sum_probs=12.6
Q ss_pred EEeCCCCCceeeehh
Q 034819 21 TYPCPCGDLFQITKD 35 (82)
Q Consensus 21 ~y~CRCGg~f~i~~~ 35 (82)
+|.|.|..+|.+..+
T Consensus 20 s~~C~C~~Gy~L~~D 34 (59)
T 2wph_E 20 KVVCSCTEGYRLAEN 34 (59)
T ss_dssp CEEEECCTTEEECTT
T ss_pred CEEeeCCCCcEECCC
Confidence 577999999998765
No 205
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.74 E-value=32 Score=16.51 Aligned_cols=17 Identities=41% Similarity=0.997 Sum_probs=11.8
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2yto_A 12 PYKCSDCGKAFT-RKSGLH 29 (46)
T ss_dssp CEECSSSCCEES-SHHHHH
T ss_pred CEECcccCCccC-CHhHHH
Confidence 57897 998887 444443
No 206
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=23.54 E-value=88 Score=18.23 Aligned_cols=31 Identities=16% Similarity=0.375 Sum_probs=20.8
Q ss_pred eCC-CCCceeeehhhhhcCceEEEcCCCcceEEEEee
Q 034819 23 PCP-CGDLFQITKDELRIGEEIARCPSCSLYITVIYN 58 (82)
Q Consensus 23 ~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~~~ 58 (82)
-|| |++.-.+..+ +....|.+|.+.--|.=.
T Consensus 10 ~CP~ck~~L~~~~~-----~~~LiC~~cg~~YPI~dG 41 (69)
T 2pk7_A 10 ACPICKGPLKLSAD-----KTELISKGAGLAYPIRDG 41 (69)
T ss_dssp CCTTTCCCCEECTT-----SSEEEETTTTEEEEEETT
T ss_pred eCCCCCCcCeEeCC-----CCEEEcCCCCcEecCcCC
Confidence 587 9987665432 233469999988777533
No 207
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=23.43 E-value=29 Score=19.97 Aligned_cols=15 Identities=20% Similarity=0.640 Sum_probs=12.8
Q ss_pred EEeCCCCCceeeehh
Q 034819 21 TYPCPCGDLFQITKD 35 (82)
Q Consensus 21 ~y~CRCGg~f~i~~~ 35 (82)
+|.|.|..+|.+..+
T Consensus 26 s~~C~C~~Gy~L~~D 40 (69)
T 1kli_L 26 KRSCRCHEGYSLLAD 40 (69)
T ss_dssp EEEEECCTTEEECTT
T ss_pred CEEEeCCCCCeECCC
Confidence 688999999998764
No 208
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=23.40 E-value=96 Score=18.11 Aligned_cols=32 Identities=19% Similarity=0.400 Sum_probs=21.8
Q ss_pred EeCC-CCCceeeehhhhhcCceEEEcCCCcceEEEEee
Q 034819 22 YPCP-CGDLFQITKDELRIGEEIARCPSCSLYITVIYN 58 (82)
Q Consensus 22 y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~~~ 58 (82)
.-|| |++.-.+..+ +....|.+|.+.--|.=.
T Consensus 9 L~CP~ck~~L~~~~~-----~~~LiC~~cg~~YPI~dG 41 (70)
T 2js4_A 9 LVCPVCKGRLEFQRA-----QAELVCNADRLAFPVRDG 41 (70)
T ss_dssp CBCTTTCCBEEEETT-----TTEEEETTTTEEEEEETT
T ss_pred eECCCCCCcCEEeCC-----CCEEEcCCCCceecCCCC
Confidence 4698 9987666543 233469999988877544
No 209
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=23.36 E-value=73 Score=18.44 Aligned_cols=28 Identities=21% Similarity=0.700 Sum_probs=20.8
Q ss_pred EEEeCCCCCceeeehhhhhcCceEEEcC--CCcceEEE
Q 034819 20 YTYPCPCGDLFQITKDELRIGEEIARCP--SCSLYITV 55 (82)
Q Consensus 20 y~y~CRCGg~f~i~~~~Le~g~~iv~C~--sCSL~I~V 55 (82)
....|-||... .+...++|+ .|..|.+.
T Consensus 15 ~~~~CiC~~~~--------~~g~MI~CD~~~C~~W~H~ 44 (78)
T 1wew_A 15 IKVRCVCGNSL--------ETDSMIQCEDPRCHVWQHV 44 (78)
T ss_dssp CCCCCSSCCCC--------CCSCEEECSSTTTCCEEEH
T ss_pred CCEEeECCCcC--------CCCCEEEECCccCCccccC
Confidence 45569998652 234789999 99999875
No 210
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...
Probab=23.25 E-value=27 Score=21.98 Aligned_cols=17 Identities=29% Similarity=0.944 Sum_probs=10.6
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.+.|+ ||..|.+-..+|
T Consensus 79 ~~RC~eCG~~fkL~~~~~ 96 (98)
T 1v54_F 79 AQRCPSCGTHYKLVPHQL 96 (98)
T ss_dssp CEECTTTCCEEEEECCCS
T ss_pred ceECCCCCeEEEEeeecC
Confidence 35774 777777654443
No 211
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.19 E-value=24 Score=16.85 Aligned_cols=16 Identities=38% Similarity=0.891 Sum_probs=11.0
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.|.|. ||-.|. ....|
T Consensus 12 ~~~C~~C~k~f~-~~~~L 28 (44)
T 2eou_A 12 TSECQECGKIFR-HSSLL 28 (44)
T ss_dssp CCCCTTTCCCCS-SHHHH
T ss_pred CeECCCCCcccC-CHHHH
Confidence 47897 998887 33444
No 212
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=23.18 E-value=90 Score=18.14 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=21.9
Q ss_pred EEeCC-CCCceeeehhhhhcCceEEEcCCCcceEEEEee
Q 034819 21 TYPCP-CGDLFQITKDELRIGEEIARCPSCSLYITVIYN 58 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~~~ 58 (82)
..-|| |++.-.+..+ + ....|.+|.++--|.=.
T Consensus 8 iL~CP~ck~~L~~~~~---~--~~LiC~~cg~~YPI~dG 41 (68)
T 2hf1_A 8 ILVCPLCKGPLVFDKS---K--DELICKGDRLAFPIKDG 41 (68)
T ss_dssp ECBCTTTCCBCEEETT---T--TEEEETTTTEEEEEETT
T ss_pred heECCCCCCcCeEeCC---C--CEEEcCCCCcEecCCCC
Confidence 44698 9987666543 2 33469999988777533
No 213
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.91 E-value=37 Score=15.41 Aligned_cols=16 Identities=38% Similarity=1.022 Sum_probs=11.0
Q ss_pred EEeCC---CCCceeeehhhh
Q 034819 21 TYPCP---CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR---CGg~f~i~~~~L 37 (82)
.|.|. ||-.|. ....|
T Consensus 6 ~~~C~~~~C~k~f~-~~~~L 24 (38)
T 1bhi_A 6 PFLCTAPGCGQRFT-NEDHL 24 (38)
T ss_dssp CEECCCTTTCCEES-SHHHH
T ss_pred ceECCCCCCCcccC-CHHHH
Confidence 47898 998887 33444
No 214
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=22.90 E-value=43 Score=18.74 Aligned_cols=28 Identities=21% Similarity=0.452 Sum_probs=18.9
Q ss_pred EEeCC-CCCceeeehhhhhcCceEEEcCCCcceE
Q 034819 21 TYPCP-CGDLFQITKDELRIGEEIARCPSCSLYI 53 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I 53 (82)
...|| ||..-.+. ......-|..|-+..
T Consensus 18 ~~fCPkCG~~~~ma-----~~~dr~~C~kCgyt~ 46 (55)
T 2k4x_A 18 HRFCPRCGPGVFLA-----EHADRYSCGRCGYTE 46 (55)
T ss_dssp SCCCTTTTTTCCCE-----ECSSEEECTTTCCCE
T ss_pred cccCcCCCCceeEe-----ccCCEEECCCCCCEE
Confidence 57797 99644333 223578999999873
No 215
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=22.72 E-value=49 Score=21.70 Aligned_cols=33 Identities=18% Similarity=0.487 Sum_probs=20.1
Q ss_pred CceeccCCceEEEeCC-CCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 10 DMEWNEELQAYTYPCP-CGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 10 Dm~~~e~~~~y~y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
.|.+++++ +.-.|| ||+ |..++.|++|.-.-..
T Consensus 48 ~~~~d~Dg--~~~~C~vC~d-----------GG~LlcCd~Cpr~Fc~ 81 (129)
T 3ql9_A 48 DISRDSDG--MDEQCRWCAE-----------GGNLICCDFCHNAFCK 81 (129)
T ss_dssp CCCBCTTS--CBSSCTTTCC-----------CSEEEECSSSSCEEEH
T ss_pred ccccCCCC--CCCcCeecCC-----------CCeeEecCCCchhhhH
Confidence 44454443 223388 874 4568899999865543
No 216
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=22.72 E-value=38 Score=15.51 Aligned_cols=11 Identities=27% Similarity=0.911 Sum_probs=9.1
Q ss_pred EEeCC---CCCcee
Q 034819 21 TYPCP---CGDLFQ 31 (82)
Q Consensus 21 ~y~CR---CGg~f~ 31 (82)
.|.|. ||-.|.
T Consensus 8 ~~~C~~~~C~k~f~ 21 (37)
T 1va1_A 8 QHICHIQGCGKVYG 21 (37)
T ss_dssp CEECCSTTCCCEES
T ss_pred CCCCCCCCCCCccC
Confidence 57897 998886
No 217
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.51 E-value=27 Score=16.82 Aligned_cols=16 Identities=31% Similarity=0.781 Sum_probs=11.0
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.|.|. ||-.|.- ...|
T Consensus 12 ~~~C~~C~k~F~~-~~~L 28 (46)
T 2enh_A 12 PYECDVCRKAFSH-HASL 28 (46)
T ss_dssp SCBCTTTCCBCSS-SHHH
T ss_pred CcCCCCcCchhCC-HHHH
Confidence 47897 9988873 3344
No 218
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=22.33 E-value=55 Score=23.56 Aligned_cols=13 Identities=31% Similarity=0.807 Sum_probs=10.6
Q ss_pred eEEEcCCCcceEE
Q 034819 42 EIARCPSCSLYIT 54 (82)
Q Consensus 42 ~iv~C~sCSL~I~ 54 (82)
.+..|.+|.+.-.
T Consensus 52 ~~~~C~~Cg~v~~ 64 (416)
T 4e2x_A 52 AVGRCDSCEMVQL 64 (416)
T ss_dssp EEEEETTTCCEEE
T ss_pred eEEECCCCCceee
Confidence 5889999998754
No 219
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.25 E-value=28 Score=16.78 Aligned_cols=17 Identities=29% Similarity=0.895 Sum_probs=11.6
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2yth_A 12 PFQCEECGKRFT-QNSHLH 29 (46)
T ss_dssp SBCCSSSCCCBS-SHHHHH
T ss_pred CCCCCCCCcccC-CHHHHH
Confidence 47897 998887 444443
No 220
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=22.07 E-value=32 Score=19.42 Aligned_cols=10 Identities=40% Similarity=1.208 Sum_probs=4.9
Q ss_pred EeCC-CCCcee
Q 034819 22 YPCP-CGDLFQ 31 (82)
Q Consensus 22 y~CR-CGg~f~ 31 (82)
|.|. ||..|.
T Consensus 18 ~~C~~C~~~f~ 28 (106)
T 2ee8_A 18 FICKFCGRHFT 28 (106)
T ss_dssp CBCSSSCCBCS
T ss_pred eECCCCCCccC
Confidence 4454 555444
No 221
>3tbo_A Zinc finger, CDGSH-type domain protein; iron-sulfur, metal binding protein; 1.50A {Pyrobaculum calidifontis}
Probab=21.96 E-value=46 Score=19.41 Aligned_cols=10 Identities=50% Similarity=1.258 Sum_probs=7.1
Q ss_pred ceEEEeCCCCC
Q 034819 18 QAYTYPCPCGD 28 (82)
Q Consensus 18 ~~y~y~CRCGg 28 (82)
..| +-||||.
T Consensus 20 ~~~-~lC~CG~ 29 (60)
T 3tbo_A 20 RAI-YLCRCGH 29 (60)
T ss_dssp -CE-EECCSSC
T ss_pred cEE-EEEECCC
Confidence 445 8899993
No 222
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=21.87 E-value=46 Score=25.91 Aligned_cols=28 Identities=14% Similarity=0.397 Sum_probs=19.8
Q ss_pred EEeCCCCCceeeehhhhhcCceEEEcCCCcceEEE
Q 034819 21 TYPCPCGDLFQITKDELRIGEEIARCPSCSLYITV 55 (82)
Q Consensus 21 ~y~CRCGg~f~i~~~~Le~g~~iv~C~sCSL~I~V 55 (82)
...|-||..+ ..+...++|+.|.-|-+.
T Consensus 5 ~~yCiC~~~~-------d~~~~MIqCD~C~~WfH~ 32 (447)
T 3kv4_A 5 PVYCLCRLPY-------DVTRFMIECDMCQDWFHG 32 (447)
T ss_dssp CEETTTTEEC-------CTTSCEEECTTTCCEEEH
T ss_pred CeEEeCCCcC-------CCCCCeEEcCCCCccccc
Confidence 3468998655 124578899999988654
No 223
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.75 E-value=23 Score=17.11 Aligned_cols=17 Identities=35% Similarity=0.882 Sum_probs=11.6
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2eoz_A 12 PYSCNVCGKAFV-LSAHLN 29 (46)
T ss_dssp SEEETTTTEEES-SHHHHH
T ss_pred CeECcccChhhC-CHHHHH
Confidence 47897 998887 444443
No 224
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.65 E-value=29 Score=16.65 Aligned_cols=17 Identities=35% Similarity=0.927 Sum_probs=11.9
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2emg_A 12 PFICSECGKVFT-HKTNLI 29 (46)
T ss_dssp SCBCTTTCCBCS-SHHHHH
T ss_pred CEECCccCcccC-CHHHHH
Confidence 47897 998887 445554
No 225
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.54 E-value=28 Score=16.75 Aligned_cols=18 Identities=33% Similarity=0.831 Sum_probs=12.0
Q ss_pred EEEeCC-CCCceeeehhhhh
Q 034819 20 YTYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le 38 (82)
-.|.|. ||-.|. ....|.
T Consensus 11 k~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2em6_A 11 KCYKCDVCGKEFS-QSSHLQ 29 (46)
T ss_dssp CCCBCSSSCCBCS-SHHHHH
T ss_pred CCeECCCCCcccC-CHHHHH
Confidence 357897 998887 444443
No 226
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=21.46 E-value=70 Score=19.81 Aligned_cols=30 Identities=27% Similarity=0.474 Sum_probs=15.3
Q ss_pred EEEeCC-CCCceeeehhhhhc------CceEEEcCCCc
Q 034819 20 YTYPCP-CGDLFQITKDELRI------GEEIARCPSCS 50 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le~------g~~iv~C~sCS 50 (82)
-.|.|. ||-.|. +...|.. ++....|+-|.
T Consensus 21 k~y~C~~C~k~F~-~~~~L~~H~~~H~~~k~~~C~~C~ 57 (133)
T 2lt7_A 21 VYYICIVCKRSYV-CLTSLRRHFNIHSWEKKYPCRYCE 57 (133)
T ss_dssp EEEEETTTCCEES-CHHHHHHHHHHHHCCSCEECSSSS
T ss_pred cCeECCCCCCCcC-CHHHHHHHHHHcCCCCCeeCCccC
Confidence 456675 766665 3334432 33345555554
No 227
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.35 E-value=29 Score=16.67 Aligned_cols=17 Identities=24% Similarity=0.686 Sum_probs=11.8
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~F~-~~~~L~ 29 (46)
T 2en9_A 12 LFKCNECKKTFT-QSSSLT 29 (46)
T ss_dssp CCBCTTTCCBCS-SHHHHH
T ss_pred CEECCccCcccC-CHHHHH
Confidence 47897 998887 444443
No 228
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.29 E-value=30 Score=16.51 Aligned_cols=16 Identities=25% Similarity=0.644 Sum_probs=11.0
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.|.|. ||-.|. ....|
T Consensus 10 ~~~C~~C~k~f~-~~~~L 26 (43)
T 2yrm_A 10 AFFCNECDCRFS-EEASL 26 (43)
T ss_dssp CBCCSSSCCCBS-SHHHH
T ss_pred CEECCCCCCeeC-ChHHH
Confidence 47897 998887 34444
No 229
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.27 E-value=30 Score=16.54 Aligned_cols=16 Identities=38% Similarity=0.912 Sum_probs=11.2
Q ss_pred EEeCC-CCCceeeehhhh
Q 034819 21 TYPCP-CGDLFQITKDEL 37 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~L 37 (82)
.|.|. ||-.|. ....|
T Consensus 12 ~~~C~~C~k~F~-~~~~L 28 (47)
T 2epx_A 12 PYECIECGKAFI-QNTSL 28 (47)
T ss_dssp SBCCSSSCCCBS-SHHHH
T ss_pred CEECCccCchhC-ChHHH
Confidence 47897 998887 34444
No 230
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.09 E-value=23 Score=17.04 Aligned_cols=17 Identities=35% Similarity=0.987 Sum_probs=11.5
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~F~-~~~~L~ 29 (46)
T 2yti_A 12 PYKCNECGKVFT-QNSHLA 29 (46)
T ss_dssp TTCCSSSCCCCS-SHHHHH
T ss_pred CeECCCCCcccC-ChhHHH
Confidence 47797 998887 444443
No 231
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.02 E-value=28 Score=16.71 Aligned_cols=18 Identities=33% Similarity=0.890 Sum_probs=12.1
Q ss_pred EEEeCC-CCCceeeehhhhh
Q 034819 20 YTYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 20 y~y~CR-CGg~f~i~~~~Le 38 (82)
-.|.|. ||-.|. ....|.
T Consensus 11 k~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2eq1_A 11 KPYKCNECGKAFR-AHSNLT 29 (46)
T ss_dssp CCCCCTTTTCCCS-SHHHHH
T ss_pred CCeECCcCChhhC-CHHHHH
Confidence 357897 998887 444443
No 232
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.97 E-value=43 Score=15.99 Aligned_cols=28 Identities=32% Similarity=0.542 Sum_probs=16.5
Q ss_pred EEeCC---CCCceeeehhhhhc------CceEEEcCCC
Q 034819 21 TYPCP---CGDLFQITKDELRI------GEEIARCPSC 49 (82)
Q Consensus 21 ~y~CR---CGg~f~i~~~~Le~------g~~iv~C~sC 49 (82)
.|.|. ||-.|. ....|.. ++.-..|+.|
T Consensus 12 ~~~C~~~~C~k~f~-~~~~L~~H~~~H~~~k~~~C~~C 48 (48)
T 2ent_A 12 PFACTWPGCGWRFS-RSDELSRHRRSHSGVKPSGPSSG 48 (48)
T ss_dssp CEECCSSSCCCEES-SHHHHHHHHTTSCCCCSCSSCCC
T ss_pred CeECCCCCCCCccC-CHHHHHHHHHHhCCCCCCCCCCC
Confidence 57895 998887 3444442 3334556554
No 233
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=20.94 E-value=1e+02 Score=17.29 Aligned_cols=33 Identities=18% Similarity=0.544 Sum_probs=17.2
Q ss_pred ceeccCCceEEEeCCCCCceeeehhhhhcCceEEEcCC--Cc-ceEEE
Q 034819 11 MEWNEELQAYTYPCPCGDLFQITKDELRIGEEIARCPS--CS-LYITV 55 (82)
Q Consensus 11 m~~~e~~~~y~y~CRCGg~f~i~~~~Le~g~~iv~C~s--CS-L~I~V 55 (82)
+..+.++.. .|-|++.. .| .+++|++ |. -|.+.
T Consensus 4 ~~~d~~e~~---yC~C~~~~--------~g-~MI~CD~c~C~~~WfH~ 39 (62)
T 2g6q_A 4 FAIDPNEPT---YCLCNQVS--------YG-EMIGCDNEQCPIEWFHF 39 (62)
T ss_dssp ------CCE---ETTTTEEC--------CS-EEEECSCTTCSSCEEET
T ss_pred cccCCCCCc---EEECCCCC--------CC-CeeeeeCCCCCcccEec
Confidence 344444443 37887542 24 6899999 66 67553
No 234
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.72 E-value=25 Score=16.73 Aligned_cols=12 Identities=42% Similarity=1.137 Sum_probs=9.2
Q ss_pred EEeCC-CCCceee
Q 034819 21 TYPCP-CGDLFQI 32 (82)
Q Consensus 21 ~y~CR-CGg~f~i 32 (82)
.|.|. ||-.|.-
T Consensus 12 ~~~C~~C~k~F~~ 24 (44)
T 2eox_A 12 SYNCNECGKAFTR 24 (44)
T ss_dssp CEEETTTTEEESS
T ss_pred CeECcccCcccCC
Confidence 57897 9988873
No 235
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.52 E-value=26 Score=16.73 Aligned_cols=17 Identities=41% Similarity=0.999 Sum_probs=11.8
Q ss_pred EEeCC-CCCceeeehhhhh
Q 034819 21 TYPCP-CGDLFQITKDELR 38 (82)
Q Consensus 21 ~y~CR-CGg~f~i~~~~Le 38 (82)
.|.|. ||-.|. ....|.
T Consensus 12 ~~~C~~C~k~f~-~~~~L~ 29 (46)
T 2ep1_A 12 PYECSDCGKSFI-KKSQLH 29 (46)
T ss_dssp SSCCSSSCCCCS-SHHHHH
T ss_pred CcCCCCCCchhC-CHHHHH
Confidence 47897 998887 444443
No 236
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=20.32 E-value=35 Score=14.75 Aligned_cols=10 Identities=40% Similarity=1.178 Sum_probs=7.8
Q ss_pred EeCC---CCCcee
Q 034819 22 YPCP---CGDLFQ 31 (82)
Q Consensus 22 y~CR---CGg~f~ 31 (82)
|.|. ||-.|.
T Consensus 4 ~~C~~~~C~k~f~ 16 (32)
T 1zfd_A 4 YSCDHPGCDKAFV 16 (32)
T ss_dssp BCCCCTTCCCCBS
T ss_pred CcCcCCCCCCccC
Confidence 6786 998886
No 237
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=20.25 E-value=1e+02 Score=17.85 Aligned_cols=32 Identities=13% Similarity=0.207 Sum_probs=21.0
Q ss_pred EeCC-CCCceeeehhhhhcCceEEEcCCCcceEEEEee
Q 034819 22 YPCP-CGDLFQITKDELRIGEEIARCPSCSLYITVIYN 58 (82)
Q Consensus 22 y~CR-CGg~f~i~~~~Le~g~~iv~C~sCSL~I~V~~~ 58 (82)
.-|| |++.-.+..+ .....|.+|.++--|.=.
T Consensus 9 L~CP~ck~~L~~~~~-----~~~LiC~~cg~~YPI~dG 41 (68)
T 2jr6_A 9 LVCPVTKGRLEYHQD-----KQELWSRQAKLAYPIKDG 41 (68)
T ss_dssp CBCSSSCCBCEEETT-----TTEEEETTTTEEEEEETT
T ss_pred eECCCCCCcCeEeCC-----CCEEEcCCCCcEecCCCC
Confidence 3587 9987665442 233469999888777533
No 238
>1x0g_A ISCA; [2Fe-2S], biosynthesis, cyanobacteria, domain swapping, Fe- S cluster, iron, iron-sulfur cluster protein, scaffold, sulfur; 2.50A {Thermosynechococcus elongatus}
Probab=20.03 E-value=29 Score=21.38 Aligned_cols=13 Identities=31% Similarity=0.973 Sum_probs=10.5
Q ss_pred EeCCCCCceeeeh
Q 034819 22 YPCPCGDLFQITK 34 (82)
Q Consensus 22 y~CRCGg~f~i~~ 34 (82)
..|-||..|.+.+
T Consensus 99 ~~CgCG~SF~~~~ 111 (112)
T 1x0g_A 99 QTCGCGMAFRVSR 111 (112)
T ss_dssp EECSSSSEEECCC
T ss_pred cCCCCCCccccCC
Confidence 4699999998753
Done!