BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034822
MVTFILQELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASIDVSNVLGTVS
LGLLMLLHFLFLVEKLKPILLV

High Scoring Gene Products

Symbol, full name Information P value
PDIL5-4
PDI-like 5-4
protein from Arabidopsis thaliana 2.2e-15
PDIL5-3
AT3G20560
protein from Arabidopsis thaliana 2.9e-14
ERGIC3
Endoplasmic reticulum-Golgi intermediate compartment protein 3
protein from Bos taurus 2.4e-05
AT1G36050 protein from Arabidopsis thaliana 7.3e-05
ERGIC3
Endoplasmic reticulum-Golgi intermediate compartment protein 3
protein from Homo sapiens 8.4e-05
Ergic3
ERGIC and golgi 3
protein from Mus musculus 8.4e-05
AT3G22290 protein from Arabidopsis thaliana 9.5e-05
ergic3
ERGIC and golgi 3
gene_product from Danio rerio 0.00062

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034822
        (82 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2136491 - symbol:PDIL5-4 "PDI-like 5-4" specie...   202  2.2e-15   1
TAIR|locus:2085750 - symbol:PDIL5-3 "PDI-like 5-3" specie...   191  2.9e-14   1
TAIR|locus:2036371 - symbol:AT1G50950 species:3702 "Arabi...   186  1.0e-13   1
UNIPROTKB|Q5EAE0 - symbol:ERGIC3 "Endoplasmic reticulum-G...   107  2.4e-05   1
TAIR|locus:2034330 - symbol:AT1G36050 "AT1G36050" species...   104  7.3e-05   1
UNIPROTKB|Q9Y282 - symbol:ERGIC3 "Endoplasmic reticulum-G...   102  8.4e-05   1
MGI|MGI:1913616 - symbol:Ergic3 "ERGIC and golgi 3" speci...   102  8.4e-05   1
TAIR|locus:2087817 - symbol:AT3G22290 "AT3G22290" species...   101  9.5e-05   1
POMBASE|SPAC24B11.08c - symbol:SPAC24B11.08c "COPII-coate...    97  0.00030   1
ZFIN|ZDB-GENE-040426-795 - symbol:ergic3 "ERGIC and golgi...    94  0.00062   1


>TAIR|locus:2136491 [details] [associations]
            symbol:PDIL5-4 "PDI-like 5-4" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0045454 "cell
            redox homeostasis" evidence=IEA] [GO:0003756 "protein disulfide
            isomerase activity" evidence=ISS] [GO:0019932
            "second-messenger-mediated signaling" evidence=RCA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] InterPro:IPR013766
            Pfam:PF00085 GO:GO:0005783 EMBL:CP002687 Gene3D:3.40.30.10
            InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0045454 PROSITE:PS51352
            GO:GO:0003756 InterPro:IPR012936 Pfam:PF07970 IPI:IPI00938885
            RefSeq:NP_680742.2 UniGene:At.2853 UniGene:At.70683
            ProteinModelPortal:F4JIR2 SMR:F4JIR2 PRIDE:F4JIR2
            EnsemblPlants:AT4G27080.2 GeneID:828816 KEGG:ath:AT4G27080
            OMA:ITENSKS Uniprot:F4JIR2
        Length = 532

 Score = 202 (76.2 bits), Expect = 2.2e-15, P = 2.2e-15
 Identities = 38/54 (70%), Positives = 46/54 (85%)

Query:     1 MVTFILQELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASIDVSN 54
             M+     ELNNYL V+TST+VIVD+S DGDFLR+DFN+SFPSL CEFAS+DVS+
Sbjct:    90 MIFLFGMELNNYLAVSTSTSVIVDRSADGDFLRLDFNISFPSLSCEFASVDVSD 143


>TAIR|locus:2085750 [details] [associations]
            symbol:PDIL5-3 "PDI-like 5-3" species:3702 "Arabidopsis
            thaliana" [GO:0045454 "cell redox homeostasis" evidence=IEA]
            [GO:0003756 "protein disulfide isomerase activity" evidence=ISS]
            [GO:0030244 "cellulose biosynthetic process" evidence=RCA]
            [GO:0048193 "Golgi vesicle transport" evidence=RCA]
            InterPro:IPR013766 Pfam:PF00085 PROSITE:PS00194 GO:GO:0016021
            EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.40.30.10
            InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0045454 PROSITE:PS51352
            EMBL:AP000410 eggNOG:COG0526 GO:GO:0003756 InterPro:IPR012936
            Pfam:PF07970 HSSP:P07237 EMBL:AY050453 IPI:IPI00531383
            RefSeq:NP_566664.1 UniGene:At.48682 UniGene:At.5498
            ProteinModelPortal:Q9LJU2 SMR:Q9LJU2 PaxDb:Q9LJU2 PRIDE:Q9LJU2
            EnsemblPlants:AT3G20560.1 GeneID:821603 KEGG:ath:AT3G20560
            TAIR:At3g20560 HOGENOM:HOG000265256 InParanoid:Q9LJU2 OMA:GHHDHES
            PhylomeDB:Q9LJU2 ProtClustDB:CLSN2688603 Genevestigator:Q9LJU2
            Uniprot:Q9LJU2
        Length = 483

 Score = 191 (72.3 bits), Expect = 2.9e-14, P = 2.9e-14
 Identities = 36/47 (76%), Positives = 44/47 (93%)

Query:     8 ELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASIDVSN 54
             EL++YL V T+TAVIVDKS+DGDFLRIDFN+SFP+L CEFAS+DVS+
Sbjct:    45 ELSSYLEVNTTTAVIVDKSSDGDFLRIDFNISFPALSCEFASVDVSD 91


>TAIR|locus:2036371 [details] [associations]
            symbol:AT1G50950 species:3702 "Arabidopsis thaliana"
            [GO:0045454 "cell redox homeostasis" evidence=IEA]
            InterPro:IPR013766 Pfam:PF00085 EMBL:CP002684 Gene3D:3.40.30.10
            InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0016853 GO:GO:0045454
            PROSITE:PS51352 InterPro:IPR012936 Pfam:PF07970 IPI:IPI00538388
            RefSeq:NP_175508.2 UniGene:At.37919 ProteinModelPortal:F4I7X9
            SMR:F4I7X9 PRIDE:F4I7X9 EnsemblPlants:AT1G50950.1 GeneID:841517
            KEGG:ath:AT1G50950 OMA:QITRERY Uniprot:F4I7X9
        Length = 484

 Score = 186 (70.5 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 34/47 (72%), Positives = 43/47 (91%)

Query:     8 ELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASIDVSN 54
             EL++YL + TST+VIVDKS+DGDFL IDFN+SFP+L CEFAS+DVS+
Sbjct:    45 ELSSYLAINTSTSVIVDKSSDGDFLNIDFNISFPALSCEFASVDVSD 91


>UNIPROTKB|Q5EAE0 [details] [associations]
            symbol:ERGIC3 "Endoplasmic reticulum-Golgi intermediate
            compartment protein 3" species:9913 "Bos taurus" [GO:0033116
            "endoplasmic reticulum-Golgi intermediate compartment membrane"
            evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
            [GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0016021
            "integral to membrane" evidence=IEA] GO:GO:0016021 GO:GO:0005794
            GO:GO:0016192 GO:GO:0005789 GO:GO:0033116 eggNOG:NOG260258
            HOGENOM:HOG000210954 InterPro:IPR012936 Pfam:PF07970 EMBL:BT020628
            EMBL:BT020629 EMBL:BT020688 EMBL:BT021799 EMBL:BT021881
            EMBL:BT026271 EMBL:BC102326 IPI:IPI00692613 IPI:IPI00760463
            IPI:IPI00760527 RefSeq:NP_001029525.2 UniGene:Bt.6352 STRING:Q5EAE0
            PRIDE:Q5EAE0 GeneID:509546 KEGG:bta:509546 CTD:51614
            HOVERGEN:HBG105706 InParanoid:Q5EAE0 NextBio:20869016
            Uniprot:Q5EAE0
        Length = 383

 Score = 107 (42.7 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 23/51 (45%), Positives = 30/51 (58%)

Query:     1 MVTFILQELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASID 51
             M+   L EL  YLT      + VDKS  GD L+I+ N+ FP +PC + SID
Sbjct:    38 MLLLFLSELQYYLTTEVHPELYVDKSR-GDKLKININVLFPHMPCAYLSID 87


>TAIR|locus:2034330 [details] [associations]
            symbol:AT1G36050 "AT1G36050" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005774
            "vacuolar membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            GO:GO:0005783 EMBL:CP002684 GO:GO:0005794 GO:GO:0005774
            InterPro:IPR012936 Pfam:PF07970 OMA:HEKSANG IPI:IPI00521029
            RefSeq:NP_564467.5 UniGene:At.28182 UniGene:At.48126 PRIDE:F4I1K2
            EnsemblPlants:AT1G36050.1 GeneID:840509 KEGG:ath:AT1G36050
            ArrayExpress:F4I1K2 Uniprot:F4I1K2
        Length = 489

 Score = 104 (41.7 bits), Expect = 7.3e-05, P = 7.3e-05
 Identities = 24/53 (45%), Positives = 34/53 (64%)

Query:     1 MVTFIL--QELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASID 51
             +V F+L   EL  YL   T T +IVD S  G+ LRI+F+++FP+L C   S+D
Sbjct:    37 VVMFLLFFSELRLYLHTVTETKLIVDTSR-GETLRINFDITFPALACSILSVD 88


>UNIPROTKB|Q9Y282 [details] [associations]
            symbol:ERGIC3 "Endoplasmic reticulum-Golgi intermediate
            compartment protein 3" species:9606 "Homo sapiens" [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
            transport" evidence=IEA] [GO:0005789 "endoplasmic reticulum
            membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
            [GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment
            membrane" evidence=IEA] GO:GO:0016021 GO:GO:0005794 GO:GO:0016192
            GO:GO:0005789 GO:GO:0033116 EMBL:AL121586 eggNOG:NOG260258
            HOGENOM:HOG000210954 InterPro:IPR012936 Pfam:PF07970 CTD:51614
            HOVERGEN:HBG105706 EMBL:AF308298 EMBL:AF151812 EMBL:AK074550
            EMBL:AF077030 EMBL:BC009765 EMBL:BC014014 EMBL:AF116614
            IPI:IPI00006438 IPI:IPI00446875 IPI:IPI00552115 RefSeq:NP_057050.1
            RefSeq:NP_938408.1 UniGene:Hs.472558 ProteinModelPortal:Q9Y282
            IntAct:Q9Y282 STRING:Q9Y282 PhosphoSite:Q9Y282 DMDM:37999823
            PaxDb:Q9Y282 PRIDE:Q9Y282 DNASU:51614 Ensembl:ENST00000348547
            Ensembl:ENST00000357394 GeneID:51614 KEGG:hsa:51614 UCSC:uc002xcq.1
            UCSC:uc002xcs.3 UCSC:uc002xct.3 GeneCards:GC20P034129
            HGNC:HGNC:15927 HPA:HPA015242 HPA:HPA015968 neXtProt:NX_Q9Y282
            PharmGKB:PA38050 OrthoDB:EOG4CC41G ChiTaRS:ERGIC3 GenomeRNAi:51614
            NextBio:55518 ArrayExpress:Q9Y282 Bgee:Q9Y282 CleanEx:HS_ERGIC3
            Genevestigator:Q9Y282 GermOnline:ENSG00000125991 Uniprot:Q9Y282
        Length = 383

 Score = 102 (41.0 bits), Expect = 8.4e-05, P = 8.4e-05
 Identities = 22/51 (43%), Positives = 30/51 (58%)

Query:     1 MVTFILQELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASID 51
             M+   L EL  YLT      + VDKS  GD L+I+ ++ FP +PC + SID
Sbjct:    38 MLLLFLSELQYYLTTEVHPELYVDKSR-GDKLKINIDVLFPHMPCAYLSID 87


>MGI|MGI:1913616 [details] [associations]
            symbol:Ergic3 "ERGIC and golgi 3" species:10090 "Mus
            musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
            evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0016020 "membrane"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA]
            MGI:MGI:1913616 GO:GO:0016021 GO:GO:0005794 GO:GO:0005789
            GO:GO:0006888 GO:GO:0005793 GO:GO:0033116 EMBL:AL833786
            eggNOG:NOG260258 HOGENOM:HOG000210954 InterPro:IPR012936
            Pfam:PF07970 GeneTree:ENSGT00530000063113 CTD:51614
            HOVERGEN:HBG105706 OMA:VHAVEIH OrthoDB:EOG4CC41G ChiTaRS:ERGIC3
            EMBL:AK009350 EMBL:AK013942 EMBL:AK050285 EMBL:BC043720
            EMBL:BC057130 IPI:IPI00132454 IPI:IPI00626555 RefSeq:NP_079792.1
            UniGene:Mm.141276 ProteinModelPortal:Q9CQE7 STRING:Q9CQE7
            PhosphoSite:Q9CQE7 PaxDb:Q9CQE7 PRIDE:Q9CQE7
            Ensembl:ENSMUST00000006035 Ensembl:ENSMUST00000088650 GeneID:66366
            KEGG:mmu:66366 UCSC:uc008nly.1 NextBio:321457 Bgee:Q9CQE7
            CleanEx:MM_ERGIC3 Genevestigator:Q9CQE7
            GermOnline:ENSMUSG00000005881 Uniprot:Q9CQE7
        Length = 383

 Score = 102 (41.0 bits), Expect = 8.4e-05, P = 8.4e-05
 Identities = 22/51 (43%), Positives = 30/51 (58%)

Query:     1 MVTFILQELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASID 51
             M+   L EL  YLT      + VDKS  GD L+I+ ++ FP +PC + SID
Sbjct:    38 MLLLFLSELQYYLTTEVHPELYVDKSR-GDKLKINIDVLFPHMPCAYLSID 87


>TAIR|locus:2087817 [details] [associations]
            symbol:AT3G22290 "AT3G22290" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005783 "endoplasmic
            reticulum" evidence=IDA] GO:GO:0005783 EMBL:CP002686
            GenomeReviews:BA000014_GR HOGENOM:HOG000210954 InterPro:IPR012936
            Pfam:PF07970 OMA:HEYILKI EMBL:AF370173 EMBL:AK175429 EMBL:AK175983
            EMBL:AK176207 EMBL:AK176296 EMBL:AK221309 IPI:IPI00528171
            RefSeq:NP_188868.2 UniGene:At.6259 UniGene:At.73136 PaxDb:Q94K91
            PRIDE:Q94K91 EnsemblPlants:AT3G22290.1 GeneID:821798
            KEGG:ath:AT3G22290 TAIR:At3g22290 eggNOG:NOG307176
            InParanoid:Q94K91 PhylomeDB:Q94K91 ProtClustDB:CLSN2680063
            ArrayExpress:Q94K91 Genevestigator:Q94K91 Uniprot:Q94K91
        Length = 354

 Score = 101 (40.6 bits), Expect = 9.5e-05, P = 9.5e-05
 Identities = 23/51 (45%), Positives = 29/51 (56%)

Query:     1 MVTFILQELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASID 51
             M T  L EL+ YL   T   + VD    G+ L I  NM+FPSLPC+  S+D
Sbjct:    38 MATLFLHELSYYLNTLTVHQMSVDLKR-GETLPIHVNMTFPSLPCDVLSVD 87


>POMBASE|SPAC24B11.08c [details] [associations]
            symbol:SPAC24B11.08c "COPII-coated vesicle component
            Erv46 (predicted)" species:4896 "Schizosaccharomyces pombe"
            [GO:0000139 "Golgi membrane" evidence=ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005783 "endoplasmic
            reticulum" evidence=IDA] [GO:0005789 "endoplasmic reticulum
            membrane" evidence=ISO] [GO:0006886 "intracellular protein
            transport" evidence=ISO] [GO:0006888 "ER to Golgi vesicle-mediated
            transport" evidence=ISO] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0030134 "ER to Golgi transport vesicle"
            evidence=ISO] InterPro:IPR027198 PomBase:SPAC24B11.08c
            GO:GO:0016021 GO:GO:0006886 GO:GO:0000139 EMBL:CU329670
            GO:GO:0005789 GO:GO:0006888 GO:GO:0030134 eggNOG:NOG260258
            HOGENOM:HOG000210954 InterPro:IPR012936 Pfam:PF07970 OMA:VHAVEIH
            PANTHER:PTHR10984:SF3 OrthoDB:EOG4ZPJ43 PIR:T38335
            RefSeq:NP_592845.1 STRING:Q09895 EnsemblFungi:SPAC24B11.08c.1
            GeneID:2541538 KEGG:spo:SPAC24B11.08c NextBio:20802635
            Uniprot:Q09895
        Length = 390

 Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
 Identities = 19/52 (36%), Positives = 32/52 (61%)

Query:     1 MVTFILQELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASIDV 52
             ++  +L E  NY  V     +IV+ S  GD + I+FN++FP +PC+  ++DV
Sbjct:    38 VIFIVLMEWINYRRVIAVHEIIVNPS-HGDRMEINFNITFPRIPCQILTVDV 88


>ZFIN|ZDB-GENE-040426-795 [details] [associations]
            symbol:ergic3 "ERGIC and golgi 3" species:7955
            "Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006810
            "transport" evidence=IEA] [GO:0005789 "endoplasmic reticulum
            membrane" evidence=IEA] [GO:0033116 "endoplasmic reticulum-Golgi
            intermediate compartment membrane" evidence=IEA]
            ZFIN:ZDB-GENE-040426-795 GO:GO:0016021 GO:GO:0005794 GO:GO:0016192
            GO:GO:0005789 GO:GO:0033116 eggNOG:NOG260258 HOGENOM:HOG000210954
            InterPro:IPR012936 Pfam:PF07970 GeneTree:ENSGT00530000063113
            CTD:51614 HOVERGEN:HBG105706 EMBL:BC044474 EMBL:BC100125
            IPI:IPI00501719 IPI:IPI00619675 RefSeq:NP_001028277.1
            RefSeq:NP_957309.1 UniGene:Dr.75394 STRING:Q803I2
            Ensembl:ENSDART00000055502 Ensembl:ENSDART00000055511 GeneID:393990
            KEGG:dre:393990 OMA:VHAVEIH NextBio:20814958 Bgee:Q803I2
            Uniprot:Q803I2
        Length = 383

 Score = 94 (38.1 bits), Expect = 0.00062, P = 0.00062
 Identities = 21/51 (41%), Positives = 28/51 (54%)

Query:     1 MVTFILQELNNYLTVTTSTAVIVDKSTDGDFLRIDFNMSFPSLPCEFASID 51
             M+     EL  YLT      + VD S  GD LRI+ ++ FP +PC + SID
Sbjct:    38 MLILFFSELQYYLTKEVHPELFVDTSR-GDKLRINIDVIFPHMPCAYLSID 87


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       82        60   0.00091  102 3  11 22  0.46    27
                                                     29  0.37    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  413 (44 KB)
  Total size of DFA:  68 KB (2060 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.46u 0.13s 7.59t   Elapsed:  00:00:00
  Total cpu time:  7.46u 0.13s 7.59t   Elapsed:  00:00:00
  Start:  Fri May 10 02:03:31 2013   End:  Fri May 10 02:03:31 2013

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