BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034824
MPASLSRLANALPFSRLFRQLETEMETVVKVLQPGPLGIIEHKFSAEEVRQASATVERAV
QNWLRNAYQEQGSEILKDYIDK

High Scoring Gene Products

Symbol, full name Information P value
AT3G62920 protein from Arabidopsis thaliana 5.5e-22

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034824
        (82 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2099147 - symbol:AT3G62920 "AT3G62920" species...   256  5.5e-22   1


>TAIR|locus:2099147 [details] [associations]
            symbol:AT3G62920 "AT3G62920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0006661 "phosphatidylinositol biosynthetic
            process" evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AL163816 IPI:IPI00523605 PIR:T48081 RefSeq:NP_191851.1
            UniGene:At.34025 PaxDb:Q9LYC9 PRIDE:Q9LYC9
            EnsemblPlants:AT3G62920.1 GeneID:825467 KEGG:ath:AT3G62920
            TAIR:At3g62920 eggNOG:NOG313605 HOGENOM:HOG000241386
            InParanoid:Q9LYC9 OMA:GIIEHKF PhylomeDB:Q9LYC9
            ProtClustDB:CLSN2684294 Genevestigator:Q9LYC9 Uniprot:Q9LYC9
        Length = 80

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 50/79 (63%), Positives = 62/79 (78%)

Query:     4 SLSRLANALPFSRLFRQLETEMETVVKVLQPGPLGIIEHKFSAEEVRQASATVERAVQNW 63
             S+ R+A ALPFS + RQLE E ETV+ VLQPGPLGIIEHKFSA+E+R+A ATV RAV +W
Sbjct:     2 SIYRIARALPFSGILRQLEKEAETVINVLQPGPLGIIEHKFSAQEIREAKATVSRAVDSW 61

Query:    64 LRNAYQEQGSEILKDYIDK 82
              R++  E  + +LKDYI K
Sbjct:    62 RRHSEVEHANGLLKDYIYK 80


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.130   0.358    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       82        82   0.00091  102 3  11 22  0.42    29
                                                     29  0.43    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  512 (54 KB)
  Total size of DFA:  92 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.73u 0.08s 9.81t   Elapsed:  00:00:00
  Total cpu time:  9.73u 0.08s 9.81t   Elapsed:  00:00:00
  Start:  Fri May 10 02:06:20 2013   End:  Fri May 10 02:06:20 2013

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