BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034827
MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLLGMGLGAVFVNQLVKWDAQLQQDL
DKMLEKAKAANERRYFGRCGHN

High Scoring Gene Products

Symbol, full name Information P value
AT4G20150 protein from Arabidopsis thaliana 6.9e-31

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034827
        (82 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2120367 - symbol:AT4G20150 "AT4G20150" species...   340  6.9e-31   1


>TAIR|locus:2120367 [details] [associations]
            symbol:AT4G20150 "AT4G20150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005774
            "vacuolar membrane" evidence=IDA] [GO:0005747 "mitochondrial
            respiratory chain complex I" evidence=IDA] [GO:0006096 "glycolysis"
            evidence=RCA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=RCA] [GO:0009060 "aerobic respiration"
            evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0046686 "response to cadmium ion" evidence=RCA] [GO:0051788
            "response to misfolded protein" evidence=RCA] [GO:0080129
            "proteasome core complex assembly" evidence=RCA] GO:GO:0005774
            EMBL:CP002687 GO:GO:0005747 UniGene:At.2179 UniGene:At.22288
            EMBL:AY045946 EMBL:AY079354 EMBL:AY086889 IPI:IPI00533215
            RefSeq:NP_567596.1 IntAct:Q94AL6 STRING:Q94AL6 PRIDE:Q94AL6
            EnsemblPlants:AT4G20150.1 GeneID:827761 KEGG:ath:AT4G20150
            TAIR:At4g20150 InParanoid:Q94AL6 OMA:VFANQLV PhylomeDB:Q94AL6
            ProtClustDB:PLN02806 BioCyc:ARA:AT4G20150-MONOMER
            BioCyc:MetaCyc:AT4G20150-MONOMER Genevestigator:Q94AL6
            Uniprot:Q94AL6
        Length = 81

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 63/76 (82%), Positives = 70/76 (92%)

Query:     1 MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLLGMGLGAVFVNQLVKWDAQLQQDL 60
             M  SATM+GALLGLGTQMYSNALRKLPYMRHPWEH++GMGLGAVF NQLVKWD +L++DL
Sbjct:     1 MPISATMVGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFANQLVKWDVKLKEDL 60

Query:    61 DKMLEKAKAANERRYF 76
             D ML KA+AANERRYF
Sbjct:    61 DVMLAKARAANERRYF 76


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.136   0.438    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       82        82   0.00091  102 3  11 22  0.38    29
                                                     29  0.43    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  538 (57 KB)
  Total size of DFA:  113 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.09u 0.12s 9.21t   Elapsed:  00:00:02
  Total cpu time:  9.09u 0.12s 9.21t   Elapsed:  00:00:02
  Start:  Fri May 10 02:08:25 2013   End:  Fri May 10 02:08:27 2013

Back to top