BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034827
         (82 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q7SA35|ALG10_NEUCR Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol
           alpha-1,2-glucosyltransferase OS=Neurospora crassa
           (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
           / FGSC 987) GN=alg-10 PE=3 SV=2
          Length = 770

 Score = 29.6 bits (65), Expect = 5.3,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 1   MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLLGMGLGAVFV 46
           MAW       LL +G     N LR L   R  W H+  MGL A FV
Sbjct: 294 MAWPDDWALCLLSIGIAALCNPLRVL---RQVWPHITIMGLFAGFV 336


>sp|P47366|Y120_MYCGE Uncharacterized protein MG120 OS=Mycoplasma genitalium (strain ATCC
           33530 / G-37 / NCTC 10195) GN=MG120 PE=4 SV=1
          Length = 520

 Score = 28.9 bits (63), Expect = 8.5,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 10  ALLGLGTQMYSNALRKLPYMRHPWEHLLGMGLGAVFVNQLVKWDAQLQQDLD 61
           A L LG  MY  AL  L     PW +L+ + +G + +     ++ +L  +L+
Sbjct: 355 ASLVLGIMMYFAALYNLMVYFKPWRYLVKLNIGKINLTTYETYENKLAANLE 406


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.136    0.438 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,589,383
Number of Sequences: 539616
Number of extensions: 950994
Number of successful extensions: 3428
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3424
Number of HSP's gapped (non-prelim): 6
length of query: 82
length of database: 191,569,459
effective HSP length: 53
effective length of query: 29
effective length of database: 162,969,811
effective search space: 4726124519
effective search space used: 4726124519
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)