BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034833
MGNKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIE
HMRLYGRLDVDLDDPDLAHLFK

High Scoring Gene Products

Symbol, full name Information P value
AT5G22210 protein from Arabidopsis thaliana 5.3e-24

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034833
        (82 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:504956454 - symbol:AT5G22210 "AT5G22210" speci...   275  5.3e-24   1


>TAIR|locus:504956454 [details] [associations]
            symbol:AT5G22210 "AT5G22210" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AL589883 EMBL:BT010605 EMBL:AK176152
            IPI:IPI00523790 RefSeq:NP_680207.1 RefSeq:NP_974820.1
            UniGene:At.45858 PRIDE:Q9C567 EnsemblPlants:AT5G22210.1
            EnsemblPlants:AT5G22210.2 GeneID:832282 KEGG:ath:AT5G22210
            TAIR:At5g22210 eggNOG:NOG280080 HOGENOM:HOG000090843
            InParanoid:Q9C567 OMA:EIHLKIV PhylomeDB:Q9C567
            ProtClustDB:CLSN2690190 Genevestigator:Q9C567 Uniprot:Q9C567
        Length = 80

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 54/83 (65%), Positives = 63/83 (75%)

Query:     1 MGNKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPIN-PHAVKPPDHYI 59
             MGNK     TVK+EREEI LK+VPPLD+ ++RWL RD++ +H F P N   A+ PPD YI
Sbjct:     1 MGNKAT---TVKEEREEIHLKIVPPLDKVFLRWLARDLQRVHGFKPKNNTRAITPPDSYI 57

Query:    60 EHMRLYGRLDVDLDDPDLAHLFK 82
             E MRL G LDVDLDDPDLAHLFK
Sbjct:    58 EFMRLNGSLDVDLDDPDLAHLFK 80


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.144   0.462    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       82        82   0.00091  102 3  11 22  0.40    29
                                                     29  0.43    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  550 (59 KB)
  Total size of DFA:  114 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.51u 0.10s 9.61t   Elapsed:  00:00:02
  Total cpu time:  9.51u 0.10s 9.61t   Elapsed:  00:00:02
  Start:  Fri May 10 02:11:12 2013   End:  Fri May 10 02:11:14 2013

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