BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034833
         (82 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|296084859|emb|CBI28268.3| unnamed protein product [Vitis vinifera]
          Length = 181

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 69/82 (84%), Gaps = 5/82 (6%)

Query: 1   MGNKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIE 60
           MGNKP     VK+E+EEI LK+VPPLDRAYVRWL RD+E IH FTP NP AVKPPDHYIE
Sbjct: 105 MGNKP-----VKEEKEEIFLKIVPPLDRAYVRWLARDLERIHGFTPKNPRAVKPPDHYIE 159

Query: 61  HMRLYGRLDVDLDDPDLAHLFK 82
           +MRL G LDV+LDDPDLAHLFK
Sbjct: 160 YMRLNGWLDVNLDDPDLAHLFK 181


>gi|225464838|ref|XP_002271152.1| PREDICTED: uncharacterized protein LOC100263775 [Vitis vinifera]
          Length = 77

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 63/82 (76%), Positives = 69/82 (84%), Gaps = 5/82 (6%)

Query: 1  MGNKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIE 60
          MGNKP     VK+E+EEI LK+VPPLDRAYVRWL RD+E IH FTP NP AVKPPDHYIE
Sbjct: 1  MGNKP-----VKEEKEEIFLKIVPPLDRAYVRWLARDLERIHGFTPKNPRAVKPPDHYIE 55

Query: 61 HMRLYGRLDVDLDDPDLAHLFK 82
          +MRL G LDV+LDDPDLAHLFK
Sbjct: 56 YMRLNGWLDVNLDDPDLAHLFK 77


>gi|255565753|ref|XP_002523866.1| conserved hypothetical protein [Ricinus communis]
 gi|223536954|gb|EEF38592.1| conserved hypothetical protein [Ricinus communis]
          Length = 81

 Score =  121 bits (303), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 59/82 (71%), Positives = 70/82 (85%), Gaps = 3/82 (3%)

Query: 1  MGNKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIE 60
          MGNKP   +TVKQEREEI LK++PP+DRAY++WL RDVEMIH +TP N  AV+PPDHYIE
Sbjct: 1  MGNKP---VTVKQEREEILLKIIPPVDRAYIQWLARDVEMIHGWTPRNCRAVEPPDHYIE 57

Query: 61 HMRLYGRLDVDLDDPDLAHLFK 82
          +MRL G +DV LDDPDLAHLF+
Sbjct: 58 YMRLNGWIDVALDDPDLAHLFQ 79


>gi|224102851|ref|XP_002312828.1| predicted protein [Populus trichocarpa]
 gi|222849236|gb|EEE86783.1| predicted protein [Populus trichocarpa]
          Length = 89

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/86 (65%), Positives = 64/86 (74%), Gaps = 5/86 (5%)

Query: 1  MGNKPA-----VPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPP 55
          MGNKP      V   + Q+R+EI LKVVPPLD AY+RWL RD+E +H FTP N  AV PP
Sbjct: 1  MGNKPTKQEREVVFPLAQDRQEILLKVVPPLDHAYLRWLARDLERVHGFTPGNCRAVTPP 60

Query: 56 DHYIEHMRLYGRLDVDLDDPDLAHLF 81
          DHY E+MRL G LDV+LDDPDLAHLF
Sbjct: 61 DHYTEYMRLQGWLDVNLDDPDLAHLF 86


>gi|449444811|ref|XP_004140167.1| PREDICTED: uncharacterized protein LOC101220037 [Cucumis sativus]
 gi|449519842|ref|XP_004166943.1| PREDICTED: uncharacterized protein LOC101230218 [Cucumis sativus]
          Length = 76

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 55/82 (67%), Positives = 62/82 (75%), Gaps = 6/82 (7%)

Query: 1  MGNKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIE 60
          MGNKP       ++R+EI +KV PPLD+A+VRWL RD+E IH F P NP AVKPPDHYIE
Sbjct: 1  MGNKPV------KQRDEIFVKVAPPLDQAFVRWLARDLERIHGFPPRNPRAVKPPDHYIE 54

Query: 61 HMRLYGRLDVDLDDPDLAHLFK 82
           MRLYG LDV LDDPDLA L K
Sbjct: 55 FMRLYGWLDVSLDDPDLARLLK 76


>gi|224132334|ref|XP_002328243.1| predicted protein [Populus trichocarpa]
 gi|222837758|gb|EEE76123.1| predicted protein [Populus trichocarpa]
          Length = 89

 Score =  105 bits (262), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/91 (62%), Positives = 64/91 (70%), Gaps = 15/91 (16%)

Query: 1  MGNKPAVPMTVKQERE----------EICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPH 50
          MGNKP     VKQERE          E  LK+VPP+D AYVRWL RD+E IH FTP N  
Sbjct: 1  MGNKP-----VKQEREAVSPLAPNRPEFLLKIVPPMDHAYVRWLARDLERIHGFTPRNCR 55

Query: 51 AVKPPDHYIEHMRLYGRLDVDLDDPDLAHLF 81
          AV PPDHY+E+MR +G LDV+LDDPDLAHLF
Sbjct: 56 AVTPPDHYVEYMRSHGWLDVNLDDPDLAHLF 86


>gi|22326986|ref|NP_680207.1| uncharacterized protein [Arabidopsis thaliana]
 gi|42573447|ref|NP_974820.1| uncharacterized protein [Arabidopsis thaliana]
 gi|13374880|emb|CAC34514.1| putative protein [Arabidopsis thaliana]
 gi|37202024|gb|AAQ89627.1| At5g22210 [Arabidopsis thaliana]
 gi|51970446|dbj|BAD43915.1| unknown protein [Arabidopsis thaliana]
 gi|332005613|gb|AED92996.1| uncharacterized protein [Arabidopsis thaliana]
 gi|332005614|gb|AED92997.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 80

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 4/83 (4%)

Query: 1  MGNKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPIN-PHAVKPPDHYI 59
          MGNK     TVK+EREEI LK+VPPLD+ ++RWL RD++ +H F P N   A+ PPD YI
Sbjct: 1  MGNKAT---TVKEEREEIHLKIVPPLDKVFLRWLARDLQRVHGFKPKNNTRAITPPDSYI 57

Query: 60 EHMRLYGRLDVDLDDPDLAHLFK 82
          E MRL G LDVDLDDPDLAHLFK
Sbjct: 58 EFMRLNGSLDVDLDDPDLAHLFK 80


>gi|297808221|ref|XP_002871994.1| hypothetical protein ARALYDRAFT_489071 [Arabidopsis lyrata subsp.
          lyrata]
 gi|297317831|gb|EFH48253.1| hypothetical protein ARALYDRAFT_489071 [Arabidopsis lyrata subsp.
          lyrata]
          Length = 80

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/83 (65%), Positives = 62/83 (74%), Gaps = 4/83 (4%)

Query: 1  MGNKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPIN-PHAVKPPDHYI 59
          MGNK     TVK+EREEI LK+VPPLD+ ++RWL RD++  H F P N   A+ PPD YI
Sbjct: 1  MGNKAT---TVKEEREEIHLKIVPPLDKVFLRWLARDLQRFHGFKPKNNTSAITPPDSYI 57

Query: 60 EHMRLYGRLDVDLDDPDLAHLFK 82
          E MRL G LDVDLDDPDLAHLFK
Sbjct: 58 EFMRLNGSLDVDLDDPDLAHLFK 80


>gi|356526840|ref|XP_003532024.1| PREDICTED: uncharacterized protein LOC100819740 [Glycine max]
          Length = 84

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 2/84 (2%)

Query: 1  MGNKPAVPMTV-KQEREEICL-KVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHY 58
          MGN+      + KQE+++I L K+VPP+D+ Y +WL RD+  IH FTP    AV+PPDHY
Sbjct: 1  MGNRFVRGNKLEKQEKDDIILLKIVPPVDQIYAKWLARDLARIHSFTPKRIRAVQPPDHY 60

Query: 59 IEHMRLYGRLDVDLDDPDLAHLFK 82
          +EHM+L G LDVDLDDPDLAHLFK
Sbjct: 61 VEHMKLNGWLDVDLDDPDLAHLFK 84


>gi|339716072|gb|AEJ88283.1| putative hypothetical protein [Wolffia arrhiza]
          Length = 81

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/66 (54%), Positives = 49/66 (74%), Gaps = 5/66 (7%)

Query: 1  MGNKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIE 60
          MGNK A     K+E++EI ++V+PPLDRA+V+WL +D+E IH F   N   ++PPDHYIE
Sbjct: 1  MGNKLA-----KEEKDEIMVRVMPPLDRAFVKWLAQDLERIHGFKVKNQPPIRPPDHYIE 55

Query: 61 HMRLYG 66
          +MRL G
Sbjct: 56 YMRLQG 61


>gi|385220917|ref|YP_005782389.1| hypothetical protein HPIN_05515 [Helicobacter pylori India7]
 gi|317009724|gb|ADU80304.1| hypothetical protein HPIN_05515 [Helicobacter pylori India7]
          Length = 843

 Score = 38.9 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 3   NKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIEHM 62
           NK  + M + Q+ + I    +P L+  Y+R  VRD ++IH F  I P+     D+ +  +
Sbjct: 100 NKTRLYMLITQDNDTILRTFIPKLNERYMRSHVRDADIIHSF--IQPNRTAKSDNALSDV 157

Query: 63  RLYGRLDVDLDDPDLAHLFK 82
            +YG      D  D   L K
Sbjct: 158 VVYGENPTQKDLTDQEDLSK 177


>gi|420440828|ref|ZP_14939779.1| hypothetical protein HPHPH30_1257 [Helicobacter pylori Hp H-30]
 gi|393054948|gb|EJB55871.1| hypothetical protein HPHPH30_1257 [Helicobacter pylori Hp H-30]
          Length = 1141

 Score = 38.5 bits (88), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 3   NKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIEHM 62
           NK  + M + Q+ + I    +P L+  Y+R  VRD ++IH F  I P+     D+ +  +
Sbjct: 189 NKTHLYMLITQDNDTILRTFIPKLNERYMRSHVRDADIIHSF--IQPNRTAKSDNALSDV 246

Query: 63  RLYG 66
            +YG
Sbjct: 247 VVYG 250


>gi|444375323|ref|ZP_21174618.1| hypothetical protein C528_07142 [Helicobacter pylori A45]
 gi|443620171|gb|ELT80622.1| hypothetical protein C528_07142 [Helicobacter pylori A45]
          Length = 211

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 3   NKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIEHM 62
           NK  + M + Q+ + I    +P L+  Y+R  VR+ ++IH F  I P+     D+ +  +
Sbjct: 71  NKTRLYMLITQDNDTILRTFIPKLNERYMRNHVRNADIIHSF--IQPNRTAKSDNALSDV 128

Query: 63  RLYG 66
            +YG
Sbjct: 129 VVYG 132


>gi|420407065|ref|ZP_14906235.1| hypothetical protein HPCPY6311_0911 [Helicobacter pylori CPY6311]
 gi|393023902|gb|EJB25016.1| hypothetical protein HPCPY6311_0911 [Helicobacter pylori CPY6311]
          Length = 729

 Score = 35.8 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 3   NKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIEHM 62
           N   + M + Q+ + I    +P L+  Y+R  VRD ++IH F  I P+     D+ +  +
Sbjct: 87  NNTRLHMLITQDNDTILRTFIPKLNERYMRNHVRDADIIHSF--IQPNRTAKSDNALSDV 144

Query: 63  RLYG 66
            +YG
Sbjct: 145 VVYG 148


>gi|298735882|ref|YP_003728407.1| hypothetical protein HPB8_386 [Helicobacter pylori B8]
 gi|298355071|emb|CBI65943.1| hypothetical protein HPB8_386 [Helicobacter pylori B8]
          Length = 441

 Score = 35.8 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 3   NKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIEHM 62
           NK  + M + Q+ + I    +P L+  Y+R  VRD ++IH F  I P+     D+ +  +
Sbjct: 233 NKTRLYMLITQDNDTILRTFIPKLNERYMRSHVRDADIIHSF--IQPNRTAKSDNALSDV 290

Query: 63  RLY 65
            +Y
Sbjct: 291 VVY 293


>gi|425789118|ref|YP_007017038.1| hypothetical protein HPAKL117_02440 [Helicobacter pylori
           Aklavik117]
 gi|425627433|gb|AFX90901.1| hypothetical protein HPAKL117_02440 [Helicobacter pylori
           Aklavik117]
          Length = 906

 Score = 35.8 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 3   NKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIEHM 62
           N+  + M + Q+ + I    +P +   YVR  VRD ++IH F  I P+     D+ +  +
Sbjct: 182 NQARLYMLITQDNDTILRTFIPDIPERYVRNHVRDADIIHSF--IQPNRTAKSDNALSDV 239

Query: 63  RLYG 66
            +YG
Sbjct: 240 VVYG 243


>gi|421714629|ref|ZP_16153950.1| hypothetical protein OUI_0469 [Helicobacter pylori R036d]
 gi|407218314|gb|EKE88143.1| hypothetical protein OUI_0469 [Helicobacter pylori R036d]
          Length = 584

 Score = 35.8 bits (81), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 3   NKPAVPMTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIEHM 62
           NK  + M + Q+ + I    +P L+  Y+R  VR+ ++IH F  I P+     D+ +  +
Sbjct: 189 NKTRLYMLITQDNDTILRTFIPKLNERYMRNHVRNADIIHSF--IQPNRTAKSDNALSDV 246

Query: 63  RLYG 66
            +YG
Sbjct: 247 VVYG 250


>gi|116778891|gb|ABK21042.1| unknown [Picea sitchensis]
 gi|116785142|gb|ABK23608.1| unknown [Picea sitchensis]
          Length = 109

 Score = 35.4 bits (80), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 5/74 (6%)

Query: 13  QEREEICLKVV---PPLDRAYVRWLVRDVEMIHR-FTPINPHAVKPPDHYIEHMRLYGRL 68
           +ER    L+ V   P LD   VR  + DV+  +R F   NPH V+P DHY+E MRL G L
Sbjct: 37  KERRRKALENVDLSPKLDPLLVR-AIDDVKKTYRPFYVKNPHPVRPNDHYLEIMRLKGWL 95

Query: 69  DVDLDDPDLAHLFK 82
           D+DL+DPDLA LFK
Sbjct: 96  DLDLNDPDLAPLFK 109


>gi|170049311|ref|XP_001855257.1| cytochrome P450 9b2 [Culex quinquefasciatus]
 gi|167871130|gb|EDS34513.1| cytochrome P450 9b2 [Culex quinquefasciatus]
          Length = 540

 Score = 35.0 bits (79), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 6/42 (14%)

Query: 33  WLVRDVEMIHRFTPINPHAVKPPDHYIEHMRLYGRLDVDLDD 74
           +++RD E+I R       AVK  DH+++H  ++G +D+D DD
Sbjct: 83  FVIRDPELIKRI------AVKDFDHFVDHRPMFGHVDMDGDD 118


>gi|308182641|ref|YP_003926768.1| hypothetical protein HPPC_02390 [Helicobacter pylori PeCan4]
 gi|308064826|gb|ADO06718.1| hypothetical protein HPPC_02390 [Helicobacter pylori PeCan4]
          Length = 121

 Score = 35.0 bits (79), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 9  MTVKQEREEICLKVVPPLDRAYVRWLVRDVEMIHRFTPINPHAVKPPDHYIEHMRLYG 66
          M + Q+ + I    +P +++ Y+R  VRD ++IH F  I P+     D  ++ + +YG
Sbjct: 5  MLITQDNDTILRTFIPDINQRYMRKHVRDADIIHSF--IQPNRTAKSDDALDAVVVYG 60


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.325    0.144    0.462 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,530,384,413
Number of Sequences: 23463169
Number of extensions: 55857526
Number of successful extensions: 118406
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 118392
Number of HSP's gapped (non-prelim): 22
length of query: 82
length of database: 8,064,228,071
effective HSP length: 53
effective length of query: 29
effective length of database: 6,820,680,114
effective search space: 197799723306
effective search space used: 197799723306
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)