Query 034834
Match_columns 82
No_of_seqs 105 out of 550
Neff 4.1
Searched_HMMs 13730
Date Mon Mar 25 11:05:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034834.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034834hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tmka_ c.37.1.1 (A:) Thymidyl 99.7 5.5E-18 4E-22 117.5 6.3 63 9-79 60-125 (214)
2 d1nn5a_ c.37.1.1 (A:) Thymidyl 99.7 7.8E-17 5.7E-21 111.7 6.5 70 2-79 50-125 (209)
3 d4tmka_ c.37.1.1 (A:) Thymidyl 99.3 2.2E-12 1.6E-16 86.8 7.1 59 16-79 70-133 (210)
4 d1gsia_ c.37.1.1 (A:) Thymidyl 98.5 3.1E-08 2.2E-12 64.9 4.3 59 16-79 67-134 (208)
5 d1p5zb_ c.37.1.1 (B:) Deoxycyt 96.2 2.9E-05 2.1E-09 50.8 -5.3 45 30-79 101-154 (241)
6 d2ocpa1 c.37.1.1 (A:37-277) De 95.7 0.0035 2.6E-07 40.9 3.1 41 15-59 74-116 (241)
7 d1e2ka_ c.37.1.1 (A:) Thymidin 94.2 0.024 1.8E-06 41.3 4.4 60 16-75 80-149 (329)
8 d1p6xa_ c.37.1.1 (A:) Thymidin 92.6 0.011 8.3E-07 43.0 0.3 37 40-76 111-152 (333)
9 d1osna_ c.37.1.1 (A:) Thymidin 91.3 0.11 8.2E-06 37.5 4.4 17 40-56 114-130 (331)
10 d2axpa1 c.37.1.1 (A:2-165) Hyp 88.6 0.083 6E-06 35.3 1.6 20 40-59 52-71 (164)
11 d1khta_ c.37.1.1 (A:) Adenylat 72.5 2.5 0.00018 24.6 4.0 30 40-69 80-109 (190)
12 d2vp4a1 c.37.1.1 (A:12-208) De 69.0 0.074 5.4E-06 33.3 -3.9 20 42-61 93-112 (197)
13 d1u2ma_ f.48.1.1 (A:) Periplas 58.1 3 0.00022 25.0 2.3 36 27-65 99-134 (143)
14 d1nksa_ c.37.1.1 (A:) Adenylat 50.1 15 0.0011 21.1 4.6 47 16-69 65-112 (194)
15 d1tf5a1 a.162.1.1 (A:227-348) 27.6 13 0.00092 22.8 1.6 34 18-51 52-94 (122)
16 d1t6sa1 a.4.5.60 (A:1-85) Segr 24.7 6.5 0.00048 22.4 -0.2 11 13-23 11-21 (85)
17 d1yj5a2 c.37.1.1 (A:351-522) 5 22.6 39 0.0028 20.4 3.3 23 27-54 55-77 (172)
No 1
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.71 E-value=5.5e-18 Score=117.51 Aligned_cols=63 Identities=24% Similarity=0.451 Sum_probs=58.3
Q ss_pred cHHHHHHHHhHHHhHHHHHHHHHHHHHHhhhhCCcEEEEeccCchhHHHhhccC---CCHHHHHhHhhcCCCCC
Q 034834 9 SHTWMITQFISSLVRIAGRRVMETKWKATKRKAGTTLIVDCYFYSGVVFASAKG---IDVEWCKAHWAAGSRFG 79 (82)
Q Consensus 9 ~~~~~~~~LLFsAdR~e~~~~I~~~L~~~~~~~G~~VI~DRY~~S~~AYq~akg---l~~~w~~~~d~gl~r~~ 79 (82)
+.+. +|||+|+|++++..|+|++ .+|.+||||||++|++|||++++ .+++|+.+.+.++|+|+
T Consensus 60 ~~~~---~llf~a~r~~~~~~i~~~l-----~~g~~VI~DRy~~S~~ayq~~~~~~~~~~~~~~~~~~~~~~PD 125 (214)
T d1tmka_ 60 DQAI---HLLFSANRWEIVDKIKKDL-----LEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVGLLKPD 125 (214)
T ss_dssp HHHH---HHHHHHHHHTTHHHHHHHH-----HTTCEEEEESCHHHHHHHHHTTCCTTCCHHHHHGGGTTSBCCS
T ss_pred chHH---HHHHHHHHHHHHHHHHHHH-----hcCCeeEecCccccchHhhhhcccchHHHHHHHHHHhcCCCcc
Confidence 5666 9999999999999999999 99999999999999999999865 57999999999999997
No 2
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=7.8e-17 Score=111.73 Aligned_cols=70 Identities=29% Similarity=0.527 Sum_probs=63.3
Q ss_pred hhhhhcc-----cHHHHHHHHhHHHhHHHHHHHHHHHHHHhhhhCCcEEEEeccCchhHHHhhc-cCCCHHHHHhHhhcC
Q 034834 2 ISAYFRI-----SHTWMITQFISSLVRIAGRRVMETKWKATKRKAGTTLIVDCYFYSGVVFASA-KGIDVEWCKAHWAAG 75 (82)
Q Consensus 2 I~~yL~~-----~~~~~~~~LLFsAdR~e~~~~I~~~L~~~~~~~G~~VI~DRY~~S~~AYq~a-kgl~~~w~~~~d~gl 75 (82)
|..||.+ +.+. +++|+++|+++.+.|+|+| ++|.+||||||.+|++|||+. .+.+..|+...+.++
T Consensus 50 i~~~l~~~~~~~~~~~---~~l~~~~r~~~~~~i~~~l-----~~g~~VI~DRy~~s~~ay~~~~~~~~~~~~~~~~~~~ 121 (209)
T d1nn5a_ 50 LSSYLQKKSDVEDHSV---HLLFSANRWEQVPLIKEKL-----SQGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGL 121 (209)
T ss_dssp HHHHHTTSSCCCHHHH---HHHHHHHHHTTHHHHHHHH-----HTTCEEEEESCHHHHHHHHHTSTTCCHHHHHGGGTTS
T ss_pred hhhhhhcccccchhhh---hhHHHHHHHHHHHhHHHHh-----hcccceeecchhhhhhhhhhhccCccHHHHHHHhccC
Confidence 4556654 5666 9999999999999999999 999999999999999999998 589999999999999
Q ss_pred CCCC
Q 034834 76 SRFG 79 (82)
Q Consensus 76 ~r~~ 79 (82)
|+|+
T Consensus 122 ~~PD 125 (209)
T d1nn5a_ 122 PKPD 125 (209)
T ss_dssp BCCS
T ss_pred CCCc
Confidence 9997
No 3
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=99.31 E-value=2.2e-12 Score=86.76 Aligned_cols=59 Identities=19% Similarity=0.133 Sum_probs=51.8
Q ss_pred HHhHHHhHHHHHH-HHHHHHHHhhhhCCcEEEEeccCchhHHHhhc-cCCCHHHHHhHhh---cCCCCC
Q 034834 16 QFISSLVRIAGRR-VMETKWKATKRKAGTTLIVDCYFYSGVVFASA-KGIDVEWCKAHWA---AGSRFG 79 (82)
Q Consensus 16 ~LLFsAdR~e~~~-~I~~~L~~~~~~~G~~VI~DRY~~S~~AYq~a-kgl~~~w~~~~d~---gl~r~~ 79 (82)
+++|+++|+.+.. .|+|+| ++|.+||||||.+|++|||+. .|++.+|+..... +.|+|+
T Consensus 70 ~~l~~~~~~~~~~~~i~~~l-----~~~~~vi~DRy~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~pd 133 (210)
T d4tmka_ 70 VLMFYAARVQLVETVIKPAL-----ANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDAVLGDFRPD 133 (210)
T ss_dssp HHHHHHHHHHHHHHTHHHHH-----HTTCEEEEECCHHHHHHHTTTTTCCCHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HcCCcccccchhhhhhhhhccccccchhHHHHHHHHhhcCCCCc
Confidence 8999999999987 599999 999999999999999999986 6899999877654 457776
No 4
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.54 E-value=3.1e-08 Score=64.87 Aligned_cols=59 Identities=15% Similarity=0.247 Sum_probs=47.5
Q ss_pred HHhHHHhHHHHHHHHHHHHHHhhhhCCcEEEEeccCchhHHHhhcc------CCCHHHHHhH---hhcCCCCC
Q 034834 16 QFISSLVRIAGRRVMETKWKATKRKAGTTLIVDCYFYSGVVFASAK------GIDVEWCKAH---WAAGSRFG 79 (82)
Q Consensus 16 ~LLFsAdR~e~~~~I~~~L~~~~~~~G~~VI~DRY~~S~~AYq~ak------gl~~~w~~~~---d~gl~r~~ 79 (82)
+++|.+++++....+.+.. ..|.+||||||.+|+.+|+.++ +...+|+..+ ..++|+|+
T Consensus 67 ~~l~~~~~~~~~~~~~~~~-----~~~~~vi~DR~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~Pd 134 (208)
T d1gsia_ 67 ATLFALDRAGAVHTIQGLC-----RGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPD 134 (208)
T ss_dssp HHHHHHHHHTTHHHHHHHH-----HHSSEEEEESCHHHHHHHHHHHTTCCTTSHHHHHHHHHHTTTSCCCCCS
T ss_pred HHHHHHHHHHHHHhHHHHh-----hhcccccccchhhhHHHHHhhccchhhhhhhHHHHHHHHHHHhhccCCc
Confidence 7889999988888888888 8999999999999999999863 3345666554 44567776
No 5
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.24 E-value=2.9e-05 Score=50.85 Aligned_cols=45 Identities=9% Similarity=0.244 Sum_probs=31.8
Q ss_pred HHHHHHHhhhhCCcEEEEeccCchhHHHhhccCCCH---------HHHHhHhhcCCCCC
Q 034834 30 METKWKATKRKAGTTLIVDCYFYSGVVFASAKGIDV---------EWCKAHWAAGSRFG 79 (82)
Q Consensus 30 I~~~L~~~~~~~G~~VI~DRY~~S~~AYq~akgl~~---------~w~~~~d~gl~r~~ 79 (82)
+.|.+ ..+.+|+||||.+++.+||.+.+... +|+.....+.|+|+
T Consensus 101 ~~~~l-----~~~~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pd 154 (241)
T d1p5zb_ 101 EKPVL-----FFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELD 154 (241)
T ss_dssp SSCEE-----EEESCHHHHHHTHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred hhhhh-----hcCCeEEEeccccHHHHHHHhcccchhHHHHHHHHHHHHhhcccCCCCc
Confidence 45555 66788999999999999998765432 35555555556665
No 6
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.68 E-value=0.0035 Score=40.94 Aligned_cols=41 Identities=20% Similarity=0.075 Sum_probs=30.5
Q ss_pred HHHhHHHhHHHHHHH--HHHHHHHhhhhCCcEEEEeccCchhHHHhh
Q 034834 15 TQFISSLVRIAGRRV--METKWKATKRKAGTTLIVDCYFYSGVVFAS 59 (82)
Q Consensus 15 ~~LLFsAdR~e~~~~--I~~~L~~~~~~~G~~VI~DRY~~S~~AYq~ 59 (82)
.+++|.++|+++... +.+.+ +..+.+||+||+.+|+.+|..
T Consensus 74 ~q~~~~~~r~~~~~~~~~~~~~----~~~~~~vi~dr~~~s~~~~~~ 116 (241)
T d2ocpa1 74 FQTFSFLSRLKVQLEPFPEKLL----QARKPVQIFERSVYSDRYIFA 116 (241)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHH----SCSSCEEEEESCHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh----hccchhhhhcccchhhhhhhh
Confidence 378889998877652 44544 255679999999999987753
No 7
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=94.20 E-value=0.024 Score=41.33 Aligned_cols=60 Identities=15% Similarity=0.065 Sum_probs=33.7
Q ss_pred HHhHHHhHHHHHHHHHHHHHH-----hhhhCCcEEEEeccCchhH-HHhhc---c-CCCHHHHHhHhhcC
Q 034834 16 QFISSLVRIAGRRVMETKWKA-----TKRKAGTTLIVDCYFYSGV-VFASA---K-GIDVEWCKAHWAAG 75 (82)
Q Consensus 16 ~LLFsAdR~e~~~~I~~~L~~-----~~~~~G~~VI~DRY~~S~~-AYq~a---k-gl~~~w~~~~d~gl 75 (82)
++.|++.+......+.+.++. .....|.+||+|||.+|+. .|..+ . .++.+.......-+
T Consensus 80 Ql~fa~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivI~DRs~~S~~~vFa~~~~~~G~ms~~~~~~l~~~~ 149 (329)
T d1e2ka_ 80 QITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDRHPIAALLCYPAARYLMGSMTPQAVLAFVALI 149 (329)
T ss_dssp HHHHHHHHHHHHHHHGGGEEEECC----CCCSEEEEEECCHHHHHTHHHHHHHHTTSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccccccCCCceeeecchhhhhHHHHHHHHhcCCCCHHHHHHHHHHh
Confidence 456665554444456665411 1124578999999999995 34322 2 35655555444444
No 8
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=92.63 E-value=0.011 Score=42.99 Aligned_cols=37 Identities=19% Similarity=0.004 Sum_probs=25.5
Q ss_pred hCCcEEEEeccCchhH---HHhhc-cC-CCHHHHHhHhhcCC
Q 034834 40 KAGTTLIVDCYFYSGV---VFASA-KG-IDVEWCKAHWAAGS 76 (82)
Q Consensus 40 ~~G~~VI~DRY~~S~~---AYq~a-kg-l~~~w~~~~d~gl~ 76 (82)
..+.+||+|||.+|+. +++.. .| ++.+...+....++
T Consensus 111 ~~~~~vI~DR~~~Ss~~iF~~~~y~~G~ls~~~~~~l~~~~~ 152 (333)
T d1p6xa_ 111 QPDLTLVFDRHPVASTVCFPAARYLLGDMSMCALMAMVATLP 152 (333)
T ss_dssp CCSEEEEEESCTHHHHTHHHHHHHHTTSSCHHHHHHHHTTCC
T ss_pred cCCCeEEEECCcccchHHHHHHhhcCCCCCHHHHHHHHHHhc
Confidence 6788999999999995 33333 34 77777666655553
No 9
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=91.31 E-value=0.11 Score=37.48 Aligned_cols=17 Identities=6% Similarity=0.042 Sum_probs=14.1
Q ss_pred hCCcEEEEeccCchhHH
Q 034834 40 KAGTTLIVDCYFYSGVV 56 (82)
Q Consensus 40 ~~G~~VI~DRY~~S~~A 56 (82)
..|.+||||||.+|+..
T Consensus 114 ~~~~~VI~DR~~~Ss~~ 130 (331)
T d1osna_ 114 EPYKIMLSDRHPIASTI 130 (331)
T ss_dssp SCCEEEEEESCTHHHHT
T ss_pred CCCCEEEEECCHhHHHH
Confidence 45789999999999853
No 10
>d2axpa1 c.37.1.1 (A:2-165) Hypothetical protein YorR {Bacillus subtilis [TaxId: 1423]}
Probab=88.55 E-value=0.083 Score=35.33 Aligned_cols=20 Identities=30% Similarity=0.647 Sum_probs=17.3
Q ss_pred hCCcEEEEeccCchhHHHhh
Q 034834 40 KAGTTLIVDCYFYSGVVFAS 59 (82)
Q Consensus 40 ~~G~~VI~DRY~~S~~AYq~ 59 (82)
.....||.|||.||+++|..
T Consensus 52 adednviidrfvysnlvyak 71 (164)
T d2axpa1 52 ADEDNVIIDRFVYSNLVYAK 71 (164)
T ss_dssp TTCCSEEEESCHHHHHHHTT
T ss_pred ccccceeeehhhhhhhHHHh
Confidence 56667999999999999965
No 11
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=72.54 E-value=2.5 Score=24.58 Aligned_cols=30 Identities=10% Similarity=-0.076 Sum_probs=22.3
Q ss_pred hCCcEEEEeccCchhHHHhhccCCCHHHHH
Q 034834 40 KAGTTLIVDCYFYSGVVFASAKGIDVEWCK 69 (82)
Q Consensus 40 ~~G~~VI~DRY~~S~~AYq~akgl~~~w~~ 69 (82)
.++.+|++|||..+...|+...+.+..+..
T Consensus 80 ~~~~~vl~d~~~~~~~~~~~~~~~~~~~~~ 109 (190)
T d1khta_ 80 AKESPVAVDTHSTVSTPKGYLPGLPSWVLN 109 (190)
T ss_dssp HTTSCEEEECCSEEEETTEEEESSCHHHHH
T ss_pred hCCCeEEECCcccchHHHHHHHhhhhhhhh
Confidence 677899999999888777666666555443
No 12
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=69.04 E-value=0.074 Score=33.27 Aligned_cols=20 Identities=5% Similarity=0.139 Sum_probs=15.7
Q ss_pred CcEEEEeccCchhHHHhhcc
Q 034834 42 GTTLIVDCYFYSGVVFASAK 61 (82)
Q Consensus 42 G~~VI~DRY~~S~~AYq~ak 61 (82)
+..|++|||.+|..+|+...
T Consensus 93 ~~~~~~d~~~~~~~~~~~~~ 112 (197)
T d2vp4a1 93 ERSIFSARYCFVENMRRNGS 112 (197)
T ss_dssp ESCHHHHHHTHHHHHHHHTS
T ss_pred CceeecchHHHHHHHHHhcc
Confidence 45577889999999998753
No 13
>d1u2ma_ f.48.1.1 (A:) Periplasmic chaperon skp (HlpA) {Escherichia coli [TaxId: 562]}
Probab=58.10 E-value=3 Score=25.03 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhhhhCCcEEEEeccCchhHHHhhccCCCH
Q 034834 27 RRVMETKWKATKRKAGTTLIVDCYFYSGVVFASAKGIDV 65 (82)
Q Consensus 27 ~~~I~~~L~~~~~~~G~~VI~DRY~~S~~AYq~akgl~~ 65 (82)
...|.+.++.+++++|..+|.|+ +++.|-...++|+
T Consensus 99 ~~~i~~~i~~ia~~~g~~lVl~~---~~~~~~~~~~~DI 134 (143)
T d1u2ma_ 99 VTRIQTAVKSVANSQDIDLVVDA---NAVAYNSSDVKDI 134 (143)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEG---GGEEEECTTSCBC
T ss_pred HHHHHHHHHHHHHHCCCeEEEeC---CceEEeCCCcCcc
Confidence 34688888999999999999996 5555544334443
No 14
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=50.07 E-value=15 Score=21.11 Aligned_cols=47 Identities=11% Similarity=-0.084 Sum_probs=24.5
Q ss_pred HHhHHHhHHHHHH-HHHHHHHHhhhhCCcEEEEeccCchhHHHhhccCCCHHHHH
Q 034834 16 QFISSLVRIAGRR-VMETKWKATKRKAGTTLIVDCYFYSGVVFASAKGIDVEWCK 69 (82)
Q Consensus 16 ~LLFsAdR~e~~~-~I~~~L~~~~~~~G~~VI~DRY~~S~~AYq~akgl~~~w~~ 69 (82)
.+++.++++++.. .+++.. .. .++.|++.++...++...+++..+..
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~-----~~--~~i~~~~~~~~~~~~~~~~~~~~~~~ 112 (194)
T d1nksa_ 65 QKKLQIDAAKGIAEEARAGG-----EG--YLFIDTHAVIRTPSGYLPGLPSYVIT 112 (194)
T ss_dssp HHHHHHHHHHHHHHHHHHTC-----SS--EEEEEECSEEEETTEEEESSCHHHHH
T ss_pred cccCHHHHHHHHHHHHHHhC-----CC--cEEEEccCchHHHHHHHHhHHHHHHh
Confidence 6667777777665 455443 44 44555554443333333455555443
No 15
>d1tf5a1 a.162.1.1 (A:227-348) Pre-protein crosslinking domain of SecA {Bacillus subtilis [TaxId: 1423]}
Probab=27.57 E-value=13 Score=22.77 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=20.6
Q ss_pred hHHHhHHHHHHHHHHHHHH---------hhhhCCcEEEEeccC
Q 034834 18 ISSLVRIAGRRVMETKWKA---------TKRKAGTTLIVDCYF 51 (82)
Q Consensus 18 LFsAdR~e~~~~I~~~L~~---------~~~~~G~~VI~DRY~ 51 (82)
||..........|..+||| |-=++|.+||+|.|.
T Consensus 52 Ly~~~n~~~~~~i~~ALkA~~lf~~d~~YiV~~~~v~ivDe~T 94 (122)
T d1tf5a1 52 LFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFT 94 (122)
T ss_dssp TTSGGGHHHHHHHHHHHHHHHTCCBTTTEEEETTEEEEBCTTT
T ss_pred cccccchhHHHHHHHHHHHHHHHhcCcceeecCCeEEEEeccC
Confidence 4444444444455666643 334678999999883
No 16
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=24.74 E-value=6.5 Score=22.37 Aligned_cols=11 Identities=18% Similarity=0.090 Sum_probs=8.6
Q ss_pred HHHHHhHHHhH
Q 034834 13 MITQFISSLVR 23 (82)
Q Consensus 13 ~~~~LLFsAdR 23 (82)
.+|++||++++
T Consensus 11 ~IEAlLFas~~ 21 (85)
T d1t6sa1 11 SLEALIFSSEE 21 (85)
T ss_dssp HHHHHHHHCSS
T ss_pred HHHHHHHhcCC
Confidence 36799999876
No 17
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.59 E-value=39 Score=20.42 Aligned_cols=23 Identities=9% Similarity=0.091 Sum_probs=18.4
Q ss_pred HHHHHHHHHHhhhhCCcEEEEeccCchh
Q 034834 27 RRVMETKWKATKRKAGTTLIVDCYFYSG 54 (82)
Q Consensus 27 ~~~I~~~L~~~~~~~G~~VI~DRY~~S~ 54 (82)
.+.++..| ++|..||+|....+-
T Consensus 55 ~~~~~~~l-----~~g~~vIiD~t~~~~ 77 (172)
T d1yj5a2 55 VSSCQAAL-----RQGKRVVIDNTNPDV 77 (172)
T ss_dssp HHHHHHHH-----HTTCCEEEESCCCSH
T ss_pred HHHHHHHH-----HCCCCceeeCcCCCH
Confidence 45688899 899999999877654
Done!