BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034867
(80 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q66GS2|B3GTC_ARATH Probable beta-1,3-galactosyltransferase 12 OS=Arabidopsis thaliana
GN=B3GALT12 PE=2 SV=1
Length = 371
Score = 98.2 bits (243), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/46 (84%), Positives = 43/46 (93%)
Query: 1 MFSNEDVTIGSWMLAMNVHHEDNRAICDPRCTSTSIAVWDIPKCSG 46
MF+NEDVTIGSWMLAM+VHHEDNRA+CDP C+ SIAVWDIPKCSG
Sbjct: 296 MFNNEDVTIGSWMLAMDVHHEDNRALCDPHCSPKSIAVWDIPKCSG 341
>sp|Q8L7M1|B3GTE_ARATH Probable beta-1,3-galactosyltransferase 14 OS=Arabidopsis thaliana
GN=B3GALT14 PE=2 SV=1
Length = 345
Score = 85.5 bits (210), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 42/46 (91%)
Query: 1 MFSNEDVTIGSWMLAMNVHHEDNRAICDPRCTSTSIAVWDIPKCSG 46
MF+NEDVTIG+WMLAMNV+HE++ +C+P C+ +S+AVWDIPKCSG
Sbjct: 272 MFNNEDVTIGAWMLAMNVNHENHHILCEPECSPSSVAVWDIPKCSG 317
>sp|Q9LKA9|B3GTD_ARATH Probable beta-1,3-galactosyltransferase 13 OS=Arabidopsis thaliana
GN=B3GALT13 PE=2 SV=1
Length = 343
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/46 (73%), Positives = 40/46 (86%)
Query: 1 MFSNEDVTIGSWMLAMNVHHEDNRAICDPRCTSTSIAVWDIPKCSG 46
MFSNEDVTIG+WMLAMNV+HE+ +C+P C+ SIAVWDIPKCSG
Sbjct: 270 MFSNEDVTIGAWMLAMNVNHENLHTLCEPECSPYSIAVWDIPKCSG 315
>sp|Q9C809|B3GT8_ARATH Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana
GN=B3GALT8 PE=2 SV=1
Length = 395
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 2 FSNEDVTIGSWMLAMNVHHEDNRAIC---DPRC 31
++NEDV++G+WML + V H D R++C P C
Sbjct: 314 YANEDVSLGAWMLGLEVEHVDERSMCCGTPPDC 346
>sp|Q9MAP8|B3GT6_ARATH Probable beta-1,3-galactosyltransferase 6 OS=Arabidopsis thaliana
GN=B3GALT6 PE=2 SV=1
Length = 399
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 22/26 (84%)
Query: 2 FSNEDVTIGSWMLAMNVHHEDNRAIC 27
++NEDV++GSW + ++V H D+R++C
Sbjct: 320 YANEDVSLGSWFIGLDVEHIDDRSLC 345
>sp|Q8LEJ9|B3GT4_ARATH Probable beta-1,3-galactosyltransferase 4 OS=Arabidopsis thaliana
GN=B3GALT4 PE=1 SV=1
Length = 407
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 2 FSNEDVTIGSWMLAMNVHHEDNRAICDPRCTST 34
+ NEDV++GSW L ++V H D+R +C C +T
Sbjct: 329 YVNEDVSLGSWFLGLDVEHVDDRRLC---CGTT 358
>sp|Q9SAA4|B3GT1_ARATH Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana
GN=B3GALT1 PE=2 SV=2
Length = 384
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 2 FSNEDVTIGSWMLAMNVHHEDNRAIC 27
++NEDV++GSW + +NV H D + +C
Sbjct: 305 YANEDVSLGSWFIGLNVEHVDEKRLC 330
>sp|Q9ZV71|B3GT3_ARATH Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana
GN=B3GALT3 PE=2 SV=1
Length = 409
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 2 FSNEDVTIGSWMLAMNVHHEDNRAIC---DPRC 31
++NEDVT+G+W + ++V H D+R +C P C
Sbjct: 330 YANEDVTLGAWFIGLDVTHIDDRRLCCGTPPDC 362
>sp|Q6NQB7|B3GT7_ARATH Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7
PE=2 SV=1
Length = 393
Score = 37.4 bits (85), Expect = 0.031, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 19/26 (73%)
Query: 2 FSNEDVTIGSWMLAMNVHHEDNRAIC 27
++NEDV++GSW + + V H D+R C
Sbjct: 314 YANEDVSLGSWFIGLEVEHIDDRNFC 339
>sp|Q9LM60|B3GT5_ARATH Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana
GN=B3GALT5 PE=2 SV=1
Length = 398
Score = 37.0 bits (84), Expect = 0.033, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 10/54 (18%)
Query: 2 FSNEDVTIGSWMLAMNVHHEDNRAIC---DPRCTSTS------IAVWDIPKCSG 46
++NEDVT+GSW + + V D+R C P C + +A +D KCSG
Sbjct: 316 YANEDVTLGSWFIGLEVEQIDDRNFCCGTPPDCEMRAEAGEMCVATFDW-KCSG 368
>sp|A8MRC7|B3GT2_ARATH Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana
GN=B3GALT2 PE=2 SV=1
Length = 407
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 2 FSNEDVTIGSWMLAMNVHHEDNRAIC---DPRC 31
++NEDV++G+W + ++V H D+R +C P C
Sbjct: 328 YANEDVSLGAWFIGIDVKHIDDRRLCCGTPPDC 360
>sp|Q94A05|B3GTA_ARATH Probable beta-1,3-galactosyltransferase 10 OS=Arabidopsis thaliana
GN=B3GALT10 PE=2 SV=1
Length = 345
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 2 FSNEDVTIGSWMLAMNVHHEDNRAICDPRCTST 34
++ +D TIGSWM+ + + D+ +C C+ST
Sbjct: 307 YAFDDTTIGSWMIGVQATYIDDNRLC---CSST 336
>sp|Q8C5P5|NT5D1_MOUSE 5'-nucleotidase domain-containing protein 1 OS=Mus musculus
GN=Nt5dc1 PE=2 SV=2
Length = 467
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 26 ICDPRCTSTSIAVWDIPKCSGNTIF 50
+ D RCTS V DIP CSG F
Sbjct: 112 VSDKRCTSDKPGVSDIPCCSGKCYF 136
>sp|Q6NRQ1|B3GL2_XENLA UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 OS=Xenopus
laevis GN=b3galnt2 PE=2 SV=1
Length = 486
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 2 FSNEDVTIGSWMLAMN-VHHEDNRAICDPRCTS 33
+ EDV++G WM A+ ++D+R +C+ +C +
Sbjct: 422 YQGEDVSMGIWMSAIGPSRYQDSRWLCEKKCEA 454
>sp|Q94F27|B3GTB_ARATH Probable beta-1,3-galactosyltransferase 11 OS=Arabidopsis thaliana
GN=B3GALT11 PE=2 SV=1
Length = 338
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 2 FSNEDVTIGSWMLAMNVHHEDNRAICDPRCTSTSI 36
++++DV+ GSW + ++V H D C +S +I
Sbjct: 300 YAHDDVSTGSWFVGLDVKHVDEGKFCCSAWSSEAI 334
>sp|Q8T2U0|Y7525_DICDI Uncharacterized protein DDB_G0275255 OS=Dictyostelium discoideum
GN=DDB_G0275255 PE=2 SV=1
Length = 289
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 15 AMNVHHEDNRAICDPRCTSTSIAVWDIPKCSGNTIFITCPA 55
+M ++NR + PRCT + IP C+ ++ P+
Sbjct: 228 SMTYSRDENRCLVSPRCTKFGVCTLSIPLCNKGYRLVSFPS 268
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.138 0.465
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,670,803
Number of Sequences: 539616
Number of extensions: 893095
Number of successful extensions: 1741
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1727
Number of HSP's gapped (non-prelim): 16
length of query: 80
length of database: 191,569,459
effective HSP length: 51
effective length of query: 29
effective length of database: 164,049,043
effective search space: 4757422247
effective search space used: 4757422247
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)