BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034868
(80 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXM8|RLA24_ARATH 60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana GN=RPP2D
PE=1 SV=1
Length = 111
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 55/82 (67%), Gaps = 11/82 (13%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGAAAA-----------PAAE 57
AVGA+ D E IE LL EV GKDI ELIASGREKLASVPSGG A A
Sbjct: 29 AVGADVDGESIELLLKEVSGKDIAELIASGREKLASVPSGGGVAVSAAPSSGGGGAAAPA 88
Query: 58 AKKEEKVEEKEESDDDMGFSLF 79
KKE K EEKEESDDDMGFSLF
Sbjct: 89 EKKEAKKEEKEESDDDMGFSLF 110
>sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1
Length = 113
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 69/85 (81%), Gaps = 13/85 (15%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGAA-------------AAPA 55
+VGAEAD+E++EFLL+E+K KDITE+IA+GRE+L+SVPSGG A AAPA
Sbjct: 29 SVGAEADEEKLEFLLTELKDKDITEVIAAGRERLSSVPSGGGAIDMGAPAAVAGGGAAPA 88
Query: 56 AEAKKEEKVEEKEESDDDMGFSLFD 80
EAKKEEKVEEKEESD+DMGFSLFD
Sbjct: 89 EEAKKEEKVEEKEESDEDMGFSLFD 113
>sp|P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Parthenium argentatum PE=3
SV=1
Length = 114
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/39 (82%), Positives = 38/39 (97%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPS 47
+VGA+ADD++IE LLS+VKGKDITELIASGRE+LASVPS
Sbjct: 29 SVGADADDDKIELLLSQVKGKDITELIASGRERLASVPS 67
>sp|P46252|RLA2A_MAIZE 60S acidic ribosomal protein P2A OS=Zea mays GN=RPP2A PE=1 SV=3
Length = 112
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 62/84 (73%), Gaps = 12/84 (14%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPS------------GGAAAAPAA 56
+VG E D+E++E LLS++ GKDITELIA+GREK ASVP AAPAA
Sbjct: 29 SVGCEVDNEKMELLLSQLSGKDITELIAAGREKFASVPCGGGGVAVAAAAPAAGGAAPAA 88
Query: 57 EAKKEEKVEEKEESDDDMGFSLFD 80
EAKKEEKVEEKEESDDDMGFSLFD
Sbjct: 89 EAKKEEKVEEKEESDDDMGFSLFD 112
>sp|Q96UQ7|RLA2_RHOGU 60S acidic ribosomal protein P2 OS=Rhodotorula glutinis PE=1 SV=1
Length = 110
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 10/82 (12%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPS---------GGAAAAPAAEAK 59
A +AD+ER+ L+ E++GKD+ E+IA G +KLASVPS GGAAA AAE K
Sbjct: 29 AADIQADEERLSVLIKELEGKDVNEVIAEGSKKLASVPSGGAAPAAAAGGAAAGGAAEEK 88
Query: 60 KEEKVEEK-EESDDDMGFSLFD 80
E+K EK EESDDDMGF LFD
Sbjct: 89 AEDKPAEKDEESDDDMGFGLFD 110
>sp|P51407|RLA21_ARATH 60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana GN=RPP2A
PE=2 SV=2
Length = 115
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 60/87 (68%), Gaps = 15/87 (17%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLA---------------SVPSGGAAAA 53
+VGAE +D +IE LL EVKGKD+ ELIA+GREKLA + GG A
Sbjct: 29 SVGAETEDSQIELLLKEVKGKDLAELIAAGREKLASVPSGGGGGVAVASATSGGGGGGGA 88
Query: 54 PAAEAKKEEKVEEKEESDDDMGFSLFD 80
PAAE+KKEEK EEKEESDDDMGFSLF+
Sbjct: 89 PAAESKKEEKKEEKEESDDDMGFSLFE 115
>sp|Q9LH85|RLA23_ARATH 60S acidic ribosomal protein P2-3 OS=Arabidopsis thaliana GN=RPP2C
PE=1 SV=1
Length = 115
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 19/89 (21%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGAAAA--------------- 53
+VGAE D+ +I+ L S +K D+TELIA+GREK++++ SGG A A
Sbjct: 29 SVGAEIDETKIDLLFSLIKDHDVTELIAAGREKMSALSSGGPAVAMVAGGGGGGAASAAE 88
Query: 54 PAAEAKKEEKVEE-KEESDDDMG-FSLFD 80
P AE+KK KVEE K+ES DD G LFD
Sbjct: 89 PVAESKK--KVEEVKDESSDDAGMMGLFD 115
>sp|P08094|RLA2_SCHPO 60S acidic ribosomal protein P2-alpha OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpp201 PE=1 SV=1
Length = 110
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGG 49
VG EA+ ERIE L++E+ GKDI ELIA+G EKLA+VP+GG
Sbjct: 29 TVGIEAESERIETLINELNGKDIDELIAAGNEKLATVPTGG 69
>sp|P42037|RLA2_ALTAL 60S acidic ribosomal protein P2 OS=Alternaria alternata GN=ALTA5
PE=1 SV=1
Length = 113
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 13/85 (15%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP-------------SGGAAAAPA 55
+VG EAD +R++ L+SE++GKDI ELIASG EKLASVP + +A A
Sbjct: 29 SVGIEADSDRLDKLISELEGKDINELIASGSEKLASVPSGGAGGAAASGGAAAAGGSAQA 88
Query: 56 AEAKKEEKVEEKEESDDDMGFSLFD 80
A + K EEKEESD+DMGF LFD
Sbjct: 89 EAAPEAAKEEEKEESDEDMGFGLFD 113
>sp|Q9C3Z5|RLA2_PODAS 60S acidic ribosomal protein P2 OS=Podospora anserina PE=3 SV=1
Length = 111
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 54/83 (65%), Gaps = 11/83 (13%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPS-----------GGAAAAPAAE 57
+VG EAD +R++ L+SE++GKD+ ELIA G KLASVPS AA A
Sbjct: 29 SVGIEADSDRLDKLISELEGKDVNELIAEGSSKLASVPSGGAGGAAAAGGAAAAGGAAEA 88
Query: 58 AKKEEKVEEKEESDDDMGFSLFD 80
A +E K EEKEESDDDMGF LFD
Sbjct: 89 APEEAKEEEKEESDDDMGFGLFD 111
>sp|P17478|RLA4_SCHPO 60S acidic ribosomal protein P2-beta OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpp202 PE=1 SV=1
Length = 110
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 10/82 (12%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPS----------GGAAAAPAAEA 58
VG EA+ ER+E L+SE+ GK+I ELIA+G EKL++VPS G A A + A
Sbjct: 29 TVGIEAEAERVESLISELNGKNIEELIAAGNEKLSTVPSAGAVATPAAGGAAGAEATSAA 88
Query: 59 KKEEKVEEKEESDDDMGFSLFD 80
++ ++ E EESD+DMGF LFD
Sbjct: 89 EEAKEEEAAEESDEDMGFGLFD 110
>sp|P42039|RLA2_DAVTA 60S acidic ribosomal protein P2 OS=Davidiella tassiana GN=CLAH5
PE=1 SV=3
Length = 111
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 33/39 (84%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPS 47
+VG +AD+ER+ LL E++GKDI ELI+SG EKLASVPS
Sbjct: 29 SVGIDADEERLSSLLKELEGKDINELISSGSEKLASVPS 67
>sp|O14317|RLA6_SCHPO 60S acidic ribosomal protein P2-C OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpp203 PE=1 SV=2
Length = 110
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 10/82 (12%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPS----------GGAAAAPAAEA 58
VG E++ ER+E L+ E+ GKDI ELIA+G EKLA+VPS AAPAAE
Sbjct: 29 TVGIESESERVEALIKELDGKDIDELIAAGNEKLATVPSGGAAAAAAPAAAGGAAPAAEE 88
Query: 59 KKEEKVEEKEESDDDMGFSLFD 80
+E+ +E+EESD+DMGF LFD
Sbjct: 89 AAKEEAKEEEESDEDMGFGLFD 110
>sp|Q9UUZ6|RLA2_ASPFU 60S acidic ribosomal protein P2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=AFUA_2G10100 PE=1 SV=2
Length = 111
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 11/83 (13%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPS-----------GGAAAAPAAE 57
+VG +AD+ER+ L++E++GKD+ ELIA G KLASVPS G AA AA
Sbjct: 29 SVGIDADEERLNKLIAELEGKDLQELIAEGSTKLASVPSGGAAAAAPAAAGAAAGGAAAP 88
Query: 58 AKKEEKVEEKEESDDDMGFSLFD 80
A +E+K EEKEESD+DMGF LFD
Sbjct: 89 AAEEKKEEEKEESDEDMGFGLFD 111
>sp|Q8TFM9|RLA2_FUSCU 60S acidic ribosomal protein P2 OS=Fusarium culmorum PE=1 SV=1
Length = 109
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 9/81 (11%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP---------SGGAAAAPAAEAK 59
+VG +AD++R+ L+SE++GKDI +LIA G EKLASVP AA A EAK
Sbjct: 29 SVGIDADEDRLNKLISELEGKDIQQLIAEGSEKLASVPSGGAGGASGGAAAAGGAAEEAK 88
Query: 60 KEEKVEEKEESDDDMGFSLFD 80
+EEK EEKEESD+DMGF LFD
Sbjct: 89 EEEKEEEKEESDEDMGFGLFD 109
>sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana
GN=RPP2B PE=1 SV=1
Length = 115
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLA 43
+VGAE +D +IE LL EVKGKD+ ELIA+GREKLA
Sbjct: 29 SVGAETEDSQIELLLKEVKGKDLAELIAAGREKLA 63
>sp|P90703|RLA2_BRUMA 60S acidic ribosomal protein P2 OS=Brugia malayi GN=rpp-2 PE=3 SV=1
Length = 114
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 13/85 (15%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGA--AAAPAAEA-------- 58
+VG + D E ++S + GK I E+I +G K++SVPS A A AP A
Sbjct: 30 SVGLDVDMEDANKVVSALSGKSIDEVITAGLAKVSSVPSDAAVSAIAPVVSATPTDALQA 89
Query: 59 ---KKEEKVEEKEESDDDMGFSLFD 80
K E K KEESD+DMGF LFD
Sbjct: 90 GSKKGETKEGPKEESDEDMGFGLFD 114
>sp|Q9HFQ4|RLA4_CANAX 60S acidic ribosomal protein P2-B OS=Candida albicans GN=RPP2B PE=1
SV=1
Length = 111
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%), Gaps = 11/83 (13%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP-----------SGGAAAAPAAE 57
+VG EA++ R++ LL +++GKD+ ELIA G KLASVP S GAAA AAE
Sbjct: 29 SVGVEAEESRLQALLKDLEGKDLQELIAEGNTKLASVPSGGAAAGGASASTGAAAGGAAE 88
Query: 58 AKKEEKVEEKEESDDDMGFSLFD 80
A++E++ E KEESDDDMGF LFD
Sbjct: 89 AEEEKEEEAKEESDDDMGFGLFD 111
>sp|O01725|RLA2_BRAFL 60S acidic ribosomal protein P2 OS=Branchiostoma floridae PE=3 SV=1
Length = 116
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 16/88 (18%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPS----------------GGAAA 52
+VG +A+DER+ ++ E+KGKDI E++A+GR KL+S+PS GG AA
Sbjct: 29 SVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKLSSMPSGGGVAAAAGGGGAAAGGGGAA 88
Query: 53 APAAEAKKEEKVEEKEESDDDMGFSLFD 80
A E K+E+K E +EESDDDMGF LFD
Sbjct: 89 PAAEEKKEEKKEESEEESDDDMGFGLFD 116
>sp|P02401|RLA2_RAT 60S acidic ribosomal protein P2 OS=Rattus norvegicus GN=Rplp2
PE=1 SV=2
Length = 115
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP 46
+VG EADDER+ ++SE+ GK+I ++IA G KLASVP
Sbjct: 29 SVGIEADDERLNKVISELNGKNIEDVIAQGVGKLASVP 66
>sp|P42899|RLA2_BOVIN 60S acidic ribosomal protein P2 OS=Bos taurus GN=RPLP2 PE=2 SV=1
Length = 115
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 15/87 (17%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP---------------SGGAAAA 53
+VG EADD+R+ ++SE+ GK+I ++IA G KLASVP +A
Sbjct: 29 SVGIEADDDRLNKVISELHGKNIEDVIAQGIGKLASVPAGGAVAVSAAPGSAAPAAGSAP 88
Query: 54 PAAEAKKEEKVEEKEESDDDMGFSLFD 80
AAE KKEEK EE EESDDDMGF LFD
Sbjct: 89 AAAEEKKEEKKEESEESDDDMGFGLFD 115
>sp|O61463|RLA2_CRYST 60S acidic ribosomal protein P2 OS=Cryptochiton stelleri PE=3 SV=1
Length = 110
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 10/82 (12%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGAAAAPAAEAKKEEKVEEKE 68
+VG E + +++ +++E+KGK++ E+IA G +KLASVPSGG AA A A +
Sbjct: 29 SVGIEVEKDQLTKVINELKGKNLDEVIAEGEKKLASVPSGGGVAAAAPAAGGGGADPAEA 88
Query: 69 E----------SDDDMGFSLFD 80
+ SDDDMGF LFD
Sbjct: 89 KEEKKEEPEEESDDDMGFGLFD 110
>sp|P99027|RLA2_MOUSE 60S acidic ribosomal protein P2 OS=Mus musculus GN=Rplp2 PE=1
SV=3
Length = 115
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP 46
+VG EADD+R+ ++SE+ GK+I ++IA G KLASVP
Sbjct: 29 SVGIEADDDRLNKVISELNGKNIEDVIAQGVGKLASVP 66
>sp|Q6X9Z5|RLA2_HORSE 60S acidic ribosomal protein P2 OS=Equus caballus GN=RPLP2 PE=3
SV=1
Length = 115
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP 46
+VG EADD+R++ ++SE+ GK+I ++IA G KLASVP
Sbjct: 29 SVGIEADDDRLDKVISELNGKNIEDVIAQGIGKLASVP 66
>sp|P05387|RLA2_HUMAN 60S acidic ribosomal protein P2 OS=Homo sapiens GN=RPLP2 PE=1
SV=1
Length = 115
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP 46
+VG EADD+R+ ++SE+ GK+I ++IA G KLASVP
Sbjct: 29 SVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
>sp|Q9LUK2|RLA25_ARATH 60S acidic ribosomal protein P2-5 OS=Arabidopsis thaliana
GN=RPP2E PE=3 SV=1
Length = 114
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASV 45
+VGAE D E+I+ S +K +D+TELIA GREK+A++
Sbjct: 29 SVGAEIDQEKIDLFFSLIKDRDVTELIAVGREKMAAL 65
>sp|P02400|RLA4_YEAST 60S acidic ribosomal protein P2-beta OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPP2B PE=1 SV=2
Length = 110
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 10/82 (12%)
Query: 9 AVGAEADDERIEFLLSEVKGK-DITELIASGREKLASVPSGGAAAAPAAEAKKEEKVEEK 67
+VGAE D+ RI LLS ++GK + E+IA G++K A+VP+GGA++A A A +
Sbjct: 29 SVGAEVDEARINELLSSLEGKGSLEEIIAEGQKKFATVPTGGASSAAAGAAGAAAGGDAA 88
Query: 68 EE---------SDDDMGFSLFD 80
EE SDDDMGF LFD
Sbjct: 89 EEEKEEEAKEESDDDMGFGLFD 110
>sp|P05319|RLA2_YEAST 60S acidic ribosomal protein P2-alpha OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPP2A PE=1 SV=1
Length = 106
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 7/79 (8%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASV-------PSGGAAAAPAAEAKKE 61
+VG E +DE++ +LS ++GK + ELI G EKLA+V G AAA+ A A++E
Sbjct: 28 SVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPAAGPASAGGAAAASGDAAAEEE 87
Query: 62 EKVEEKEESDDDMGFSLFD 80
++ E EESDDDMGF LFD
Sbjct: 88 KEEEAAEESDDDMGFGLFD 106
>sp|P02399|RLA2_ARTSA 60S acidic ribosomal protein P2 OS=Artemia salina PE=1 SV=1
Length = 111
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%), Gaps = 11/83 (13%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP-----------SGGAAAAPAAE 57
+VG E + +++ +++E+KGKD+ LIA G+ KLAS+P + A AA A E
Sbjct: 29 SVGIECNPSQLQKVMNELKGKDLEALIAEGQTKLASMPTGGAPAAAAGGAATAPAAEAKE 88
Query: 58 AKKEEKVEEKEESDDDMGFSLFD 80
AKKEEK EE EE D+DMGF LFD
Sbjct: 89 AKKEEKKEESEEEDEDMGFGLFD 111
>sp|P22683|RLA2_DICDI 60S acidic ribosomal protein P2 OS=Dictyostelium discoideum
GN=rplp2 PE=1 SV=3
Length = 106
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASV--------PSGGAAAAPAAEAKK 60
+VG E D R+E + E+ GKD+ LIA+G+ K+ SV + A AA AA K
Sbjct: 27 SVGVEVDAARVESVCKELDGKDVQALIAAGKSKVGSVAAAAAPAAATSAAPAAAAAAPAK 86
Query: 61 EEKVEEKEESDDDMGFSLFD 80
+ E+KEESDDDMG LFD
Sbjct: 87 KVVEEKKEESDDDMGMGLFD 106
>sp|Q8SRM2|RLA2_ENCCU 60S acidic ribosomal protein P2 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPP2A PE=1 SV=1
Length = 103
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 10 VGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGAA----AAPAAEAKKEEKVE 65
+GAE + E + LS+V GK + E+++ G+E +AS+ + A PA A+ + E
Sbjct: 29 IGAEIEPETMRLFLSKVSGKSMDEVMSKGKELMASLAISSSQKSEPAQPADTAESTQATE 88
Query: 66 EKEESDDDMGFSLF 79
KEE D+D F +F
Sbjct: 89 NKEEEDED--FDIF 100
>sp|Q29315|RLA2_PIG 60S acidic ribosomal protein P2 OS=Sus scrofa GN=RPLP2 PE=3 SV=1
Length = 115
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 15/87 (17%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP---------------SGGAAAA 53
+VG EAD +R+ ++SE+ GK+I ++IA G KLASVP +A
Sbjct: 29 SVGIEADXDRLNKVISELNGKNIEDVIAQGIGKLASVPSGGAXAVAAAPGSXAPAAGSAP 88
Query: 54 PAAEAKKEEKVEEKEESDDDMGFSLFD 80
AAE KKEEK EE EESDDDMGF LFD
Sbjct: 89 AAAEEKKEEKKEESEESDDDMGFGLFD 115
>sp|P51408|RLA2_TRYBB 60S acidic ribosomal protein P2 OS=Trypanosoma brucei brucei PE=3
SV=1
Length = 107
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 37/84 (44%), Gaps = 16/84 (19%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGAAAAPAAEAKKEEKVEEKE 68
A G D R+E LLSEV+GKD L A G+ KL GG A AA +
Sbjct: 28 AAGVPVDSSRVEELLSEVEGKDFDALCAEGKAKLV----GGVTAGGAAPSGGAAAHAAAA 83
Query: 69 ES------------DDDMGFSLFD 80
+ DDDMGF LFD
Sbjct: 84 SAPAAAAAEAEEEDDDDMGFGLFD 107
>sp|O01504|RLA2_CAEEL 60S acidic ribosomal protein P2 OS=Caenorhabditis elegans GN=rpa-2
PE=3 SV=2
Length = 107
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 7/77 (9%)
Query: 11 GAEADDERIEFLLSEVKGKDITELIASGREKLASVP-------SGGAAAAPAAEAKKEEK 63
G + D E ++ +KGK I+E+IA G+ KL+SVP + + A +A++++K
Sbjct: 31 GLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVPSGGSAPAAAAPSGGAAPKAEEKKK 90
Query: 64 VEEKEESDDDMGFSLFD 80
E KEESDDDMGF LFD
Sbjct: 91 EEPKEESDDDMGFGLFD 107
>sp|P05389|RLA2_DROME 60S acidic ribosomal protein P2 OS=Drosophila melanogaster
GN=RpLP2 PE=1 SV=1
Length = 113
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASV 45
+VG E D ER+ ++ E+ GK I +LI GREKL+S+
Sbjct: 29 SVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSM 65
>sp|P50879|RLA2_TAESO 60S acidic ribosomal protein P2 OS=Taenia solium PE=2 SV=1
Length = 121
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 21/93 (22%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASV---------PSGGAAAAPAAEAK 59
+VG E + ER + + ++ GK++ +LI +G+EK+++V PSGGA AA A A+
Sbjct: 29 SVGVECEQERAKLGVDQLHGKNVRDLINTGKEKMSAVSFGATPVAVPSGGAPAAATAAAE 88
Query: 60 KEE------------KVEEKEESDDDMGFSLFD 80
+ K EE EESD DMGFS FD
Sbjct: 89 APKGGDKAAAPPKEEKKEESEESDADMGFSPFD 121
>sp|O44010|RLA2_LEIBR 60S acidic ribosomal protein P2 OS=Leishmania braziliensis GN=LIP2
PE=1 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGAAAAPAAEAKKE------E 62
A G + R++ L E++GK EL+ GR KL S AAA + +
Sbjct: 28 AAGVAIELSRVDALFQELEGKSFDELMTEGRSKLVGSGSAAPAAAASTAGAAVAAAADAK 87
Query: 63 KVEEKEESDDDMGFSLFD 80
K +EE+DDDMGF LFD
Sbjct: 88 KEASEEEADDDMGFGLFD 105
>sp|Q9HFQ5|RLA2_CANAX 60S acidic ribosomal protein P2-A OS=Candida albicans GN=RPP2A PE=1
SV=1
Length = 108
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 22 LLSEVKGKDITELIASGREKLASV--------PSGGAAAAPAAEAKKEEKVEEKEESDDD 73
L+SE GK++ ELIA G EKL+SV G +AAA ++ + E EESDDD
Sbjct: 42 LISESDGKNVEELIAEGNEKLSSVPSGAPAAAAGGASAAAGGEATEEAAEEEAAEESDDD 101
Query: 74 MGFSLFD 80
M F LFD
Sbjct: 102 MSFGLFD 108
>sp|P23632|RLA2_TRYCR 60S acidic ribosomal protein P2-A OS=Trypanosoma cruzi PE=1 SV=1
Length = 107
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 18/85 (21%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGAAAAP-------------A 55
A G D R++ L +E GKD + G+ KL G P A
Sbjct: 28 AAGVPVDPSRVDALFAEFAGKDFDTVCTEGKSKLV-----GGVTRPNAATASAPTAAAAA 82
Query: 56 AEAKKEEKVEEKEESDDDMGFSLFD 80
+ +EE DDDMGF LFD
Sbjct: 83 SSGAAAPAAAAEEEEDDDMGFGLFD 107
>sp|Q9JWP0|SYM_NEIMA Methionine--tRNA ligase OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=metG PE=3 SV=1
Length = 685
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 17 ERIEFLLSEVKGKDITELIASGREKLASVPSGGAAAAPAAEAKKEEKVEEKEESDDDM 74
+ E L+ V+ K + +LI + ++ + + P APAAE + EKV E+ DD M
Sbjct: 533 NKYEHLMQRVEQKQVDDLIEANKQSIQTTP------APAAEESQYEKVAEQASFDDFM 584
>sp|P27055|RLA2_BABBO 60S acidic ribosomal protein P2 OS=Babesia bovis PE=3 SV=1
Length = 112
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 10/82 (12%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP----------SGGAAAAPAAEA 58
AVG++ D+E ++ L+ + GK + E IA+G KL S+P +GGA AA +A
Sbjct: 31 AVGSDVDEECLQGLVDSMSGKTVHETIAAGMTKLQSMPAGGAAMPAAAAGGAPAAAEDKA 90
Query: 59 KKEEKVEEKEESDDDMGFSLFD 80
+ ++ E EE +DDMGFSLFD
Sbjct: 91 EAKKPEAEPEEEEDDMGFSLFD 112
>sp|Q967Y9|RLA2_EIMTE 60S acidic ribosomal protein P2 OS=Eimeria tenella PE=3 SV=2
Length = 114
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 14/85 (16%)
Query: 10 VGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGA--------------AAAPA 55
VGAE + E ++ L+ ++GK E+I++G EKL VP GG + +
Sbjct: 30 VGAEVNPEVLKTLIDAMQGKAAHEVISAGLEKLQKVPCGGGAAAAAPAAAAAAGGGDSSS 89
Query: 56 AEAKKEEKVEEKEESDDDMGFSLFD 80
A + +++ E+EE D DMG SLFD
Sbjct: 90 AAKETKKEEPEEEEEDGDMGLSLFD 114
>sp|Q06382|RLA3_LEIIN 60S acidic ribosomal protein P2-2 OS=Leishmania infantum GN=LIP'
PE=2 SV=1
Length = 111
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVP 46
AV + D + F++ V G+D+ LIA G K++++P
Sbjct: 30 AVHIDVDQATLAFVMESVTGRDVATLIAEGAAKMSAMP 67
>sp|Q06383|RLA2_LEIIN 60S acidic ribosomal protein P2-1 OS=Leishmania infantum GN=LIP
PE=2 SV=1
Length = 106
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASVPSGGAA 51
A G D R++ + EV+GK L+A GR KL V SG AA
Sbjct: 28 AAGVAVDASRVDAVFQEVEGKSFDALVAEGRTKL--VGSGSAA 68
>sp|O00806|RLA2_PLAF7 60S acidic ribosomal protein P2 OS=Plasmodium falciparum (isolate
3D7) GN=MAL3P3.19 PE=3 SV=1
Length = 112
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASV 45
AV A+ +DE + + +KGK ELI G +KL ++
Sbjct: 31 AVNADVEDEVLNNFIDSLKGKSCHELITDGLKKLQNI 67
>sp|Q9GPU2|RLA2_EUPRA 60S acidic ribosomal protein P2 OS=Euplotes raikovi PE=3 SV=1
Length = 113
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 27/37 (72%)
Query: 9 AVGAEADDERIEFLLSEVKGKDITELIASGREKLASV 45
+VG +++ ++++ LL ++GK + ELI +G K++S+
Sbjct: 29 SVGVDSEQDKLDALLKNLEGKQLHELIEAGSSKVSSL 65
>sp|Q9PV90|RLA0_DANRE 60S acidic ribosomal protein P0 OS=Danio rerio GN=rplp0 PE=2 SV=1
Length = 319
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 11/15 (73%), Positives = 13/15 (86%)
Query: 66 EKEESDDDMGFSLFD 80
+ EESD+DMGF LFD
Sbjct: 305 DSEESDEDMGFGLFD 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.129 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,004,883
Number of Sequences: 539616
Number of extensions: 1097664
Number of successful extensions: 10261
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 9426
Number of HSP's gapped (non-prelim): 434
length of query: 80
length of database: 191,569,459
effective HSP length: 51
effective length of query: 29
effective length of database: 164,049,043
effective search space: 4757422247
effective search space used: 4757422247
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)