Query 034871
Match_columns 80
No_of_seqs 56 out of 58
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 11:43:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034871.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034871hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2krx_A ASL3597 protein; struct 100.0 9.5E-39 3.3E-43 213.1 6.8 73 2-80 6-78 (94)
2 1wy1_A Hypothetical protein PH 67.0 7.9 0.00027 26.9 4.3 38 24-68 81-122 (172)
3 3ddc_B RAS association domain- 61.2 4.6 0.00016 28.6 2.2 24 15-38 1-24 (163)
4 2hp0_A IDS-epimerase; MMGE/PRP 57.8 10 0.00036 29.6 3.9 48 14-79 417-464 (466)
5 3skq_A Mitochondrial distribut 57.6 10 0.00035 28.3 3.7 29 19-51 164-192 (249)
6 2l6a_A Nacht, LRR and PYD doma 49.9 34 0.0012 21.7 4.8 48 20-69 21-68 (102)
7 3cpf_A Eukaryotic translation 49.1 15 0.0005 24.5 3.0 35 2-36 79-116 (138)
8 2hm2_Q ASC2, pyrin-only protei 48.9 30 0.001 21.1 4.3 49 20-69 14-62 (89)
9 2zhy_A ATP:COB(I)alamin adenos 48.4 19 0.00066 25.2 3.7 42 20-68 83-128 (183)
10 1ucp_A Pycard, ASC, apoptosis- 46.7 33 0.0011 21.0 4.3 48 21-69 15-62 (91)
11 2g2d_A ATP:cobalamin adenosylt 46.6 26 0.00087 24.7 4.1 41 21-68 92-136 (193)
12 2k0m_A Uncharacterized protein 45.8 8.7 0.0003 25.0 1.5 24 16-39 10-33 (104)
13 3ke4_A Hypothetical cytosolic 44.0 17 0.0006 26.3 3.0 41 21-68 104-148 (213)
14 1vp7_A Exodeoxyribonuclease VI 42.7 34 0.0012 22.2 4.0 33 13-49 22-54 (100)
15 1wvt_A Hypothetical protein ST 40.3 29 0.00098 24.1 3.5 41 21-68 75-119 (172)
16 1w1n_A Phosphatidylinositol 3- 38.5 6.4 0.00022 20.9 -0.1 15 55-69 4-18 (33)
17 3ci3_A Cobalamin adenosyltrans 37.0 27 0.00093 24.7 3.0 41 21-68 93-137 (194)
18 2idx_A COB(I)yrinic acid A,C-d 36.7 26 0.00089 24.7 2.9 39 24-68 93-135 (196)
19 2nt8_A Cobalamin adenosyltrans 35.6 29 0.00098 25.2 3.0 41 21-68 122-166 (223)
20 1rty_A YVQK protein; all alpha 35.3 29 0.001 24.5 3.0 41 21-68 85-129 (193)
21 2ah6_A BH1595, unknown conserv 35.1 29 0.001 24.9 3.0 41 21-68 98-142 (208)
22 2dlx_A UBX domain-containing p 33.7 79 0.0027 20.6 4.8 32 8-39 104-140 (153)
23 2dml_A Protein disulfide-isome 33.0 72 0.0025 18.4 4.1 32 7-38 91-127 (130)
24 2p8e_A PPM1B beta isoform vari 31.8 34 0.0011 24.2 2.8 47 7-69 237-283 (307)
25 2qjz_A Microtubule-associated 31.0 32 0.0011 22.7 2.4 18 19-36 3-20 (123)
26 3g2f_A Bone morphogenetic prot 30.6 32 0.0011 23.2 2.4 24 17-40 300-323 (336)
27 2kn6_A Apoptosis-associated sp 29.0 1.3E+02 0.0045 21.3 5.5 48 21-69 35-82 (215)
28 2opw_A Phyhd1 protein; double- 28.5 37 0.0013 23.4 2.5 20 5-29 13-32 (291)
29 2afd_A Protein ASL1650; twiste 28.0 57 0.002 18.0 2.9 18 48-65 68-85 (88)
30 3hks_A EIF-5A-2, eukaryotic tr 27.5 39 0.0013 23.5 2.5 35 2-36 101-140 (167)
31 2fct_A Syringomycin biosynthes 27.4 39 0.0013 23.6 2.5 28 5-37 19-46 (313)
32 2i0o_A Ser/Thr phosphatase; be 26.7 49 0.0017 23.2 2.9 50 6-70 235-284 (304)
33 2ehs_A ACP, acyl carrier prote 26.7 56 0.0019 17.6 2.7 39 21-66 36-74 (77)
34 1pn5_A Nacht-, LRR- and PYD-co 25.9 1.2E+02 0.0042 21.0 4.8 48 21-69 74-121 (159)
35 2ava_A ACP I, acyl carrier pro 25.8 82 0.0028 17.4 3.3 37 21-65 39-76 (82)
36 2kwl_A ACP, acyl carrier prote 25.7 82 0.0028 17.6 3.3 17 21-37 5-21 (84)
37 3lhr_A Zinc finger protein 24; 25.6 12 0.00041 23.9 -0.4 7 21-27 43-49 (93)
38 2cq8_A 10-formyltetrahydrofola 25.5 91 0.0031 20.0 3.8 41 21-68 58-99 (110)
39 2drn_C 24-residues peptide fro 25.4 43 0.0015 17.2 1.8 15 54-68 1-15 (26)
40 2a1x_A Phytanoyl-COA dioxygena 25.2 39 0.0013 23.6 2.2 22 5-31 32-53 (308)
41 1wyo_A Protein EB3, microtubul 25.1 39 0.0013 23.4 2.1 24 13-36 14-37 (159)
42 1l0i_A Acyl carrier protein; a 24.8 62 0.0021 17.7 2.6 37 22-66 39-76 (78)
43 1p68_A De novo designed protei 24.6 97 0.0033 20.1 3.8 45 24-77 10-54 (102)
44 2rdq_A 1-deoxypentalenic acid 24.4 42 0.0014 23.0 2.2 27 5-36 29-58 (288)
45 1t0c_A Insulin; type I beta-tu 23.7 29 0.001 18.4 1.0 13 68-80 10-22 (31)
46 2lol_A ACP, acyl carrier prote 23.4 85 0.0029 17.3 3.1 17 48-64 61-77 (81)
47 1sen_A Thioredoxin-like protei 22.8 1.5E+02 0.0051 18.6 4.5 20 20-39 133-152 (164)
48 1kq3_A Glycerol dehydrogenase; 22.4 1E+02 0.0035 22.5 4.0 40 23-69 299-341 (376)
49 2pnq_A [pyruvate dehydrogenase 22.2 32 0.0011 26.6 1.3 32 6-37 338-369 (467)
50 1szq_A 2-methylcitrate dehydra 21.1 65 0.0022 24.9 2.9 24 14-37 426-450 (483)
51 2zc2_A DNAD-like replication p 21.1 78 0.0027 18.1 2.7 24 19-50 16-39 (78)
52 3fk8_A Disulphide isomerase; A 21.0 99 0.0034 18.0 3.1 15 20-34 118-132 (133)
53 1a6q_A Phosphatase 2C; catalyt 20.7 66 0.0022 23.9 2.7 47 7-69 231-277 (382)
54 3qf2_A Nacht, LRR and PYD doma 20.5 1.7E+02 0.0056 18.5 4.3 48 21-69 15-62 (110)
55 3er0_A Eukaryotic translation 20.4 20 0.00068 24.9 -0.2 34 2-35 103-139 (167)
56 2do5_A Splicing factor 3B subu 20.3 1.5E+02 0.0051 17.7 3.7 16 22-37 30-45 (58)
57 1i4w_A Mitochondrial replicati 20.2 25 0.00085 26.6 0.3 12 67-78 60-71 (353)
58 3p2a_A Thioredoxin 2, putative 20.1 77 0.0026 19.0 2.6 31 8-38 112-146 (148)
59 3emr_A ECTD; double stranded b 20.0 56 0.0019 23.5 2.2 18 5-27 44-61 (310)
60 2fi2_A Zinc finger protein 42; 20.0 18 0.00063 23.4 -0.4 8 54-61 76-83 (94)
No 1
>2krx_A ASL3597 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, unknown function; NMR {Nostoc SP}
Probab=100.00 E-value=9.5e-39 Score=213.14 Aligned_cols=73 Identities=32% Similarity=0.496 Sum_probs=70.6
Q ss_pred CccccCceEEecCCCCccccCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhcccccccCCcccCC
Q 034871 2 AYSRTETYVLLEPGVEEKFVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCELELQGDVGSIQ 80 (80)
Q Consensus 2 my~q~D~YVvLEp~~~EqflT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CELEi~pG~~~~~ 80 (80)
|| |+|||||||||+||||||++||++|||+||+++|+ ++||+||+||+|+++||+||++|+|||||+||+ +||
T Consensus 6 my-q~D~yVvLEp~~~EqfLT~~Ell~~Lk~~L~~~~~----~~LP~dL~~~~s~~~qaq~Lldt~CELei~pG~-~lQ 78 (94)
T 2krx_A 6 MY-QQDNFVVLETNQPEQFLTTIELLEKLKGELEKISF----SDLPLELQKLDSLPAQAQHLIDTSCELDVGAGK-YLQ 78 (94)
T ss_dssp SC-CCCCEEEEESSSCSEEECHHHHHHHHHHHHHHSCT----TTSCHHHHHCCCHHHHHHHHHHHCCCEEEETTE-EEE
T ss_pred hc-ccCCEEEecCCCCcccCCHHHHHHHHHHHHHhCcc----ccCCHHHHhCCCHHHHHHHHHHheeeeeeCCCC-EEE
Confidence 89 99999999999999999999999999999999985 499999999999999999999999999999998 776
No 2
>1wy1_A Hypothetical protein PH0671; structural genomics, riken structural genomics/proteomics in RSGI, transferase; 1.80A {Pyrococcus horikoshii}
Probab=66.97 E-value=7.9 Score=26.95 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCChHhhcc----CCHHHHHHHHHHhcc
Q 034871 24 EELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (80)
Q Consensus 24 ~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qaq~Lldt~C 68 (80)
++-.+||+.|+..+.. .|| |..| .|..+++-|+..|.|
T Consensus 81 ~~~v~~LE~~id~~~~-----~lp--l~~FILPgg~~~aA~Lh~aRtv~ 122 (172)
T 1wy1_A 81 EERIKWLEGLISRYEE-----MVN--LKSFVLPGGTLESAKLDVCRTIA 122 (172)
T ss_dssp HHHHHHHHHHHHHHHT-----TCS--CCSSCCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh-----hCC--CcCeEECCCCHHHHHHHHHHHHH
Confidence 4778999999999985 688 7777 588888899999988
No 3
>3ddc_B RAS association domain-containing family protein; oncogene, tumorsuppressor, ubiquitin fold, RAS effector, RAP rassf1, rassf5, RAPL, NORE1, GMPPNP; HET: GNP; 1.80A {Mus musculus}
Probab=61.16 E-value=4.6 Score=28.63 Aligned_cols=24 Identities=21% Similarity=0.165 Sum_probs=16.9
Q ss_pred CCCccccCHHHHHHHHHHHHHhhh
Q 034871 15 GVEEKFVTEEELKARLKYWLENWA 38 (80)
Q Consensus 15 ~~~EqflT~~Ell~~Lk~~L~~~~ 38 (80)
|.||+-||.+|+.+|++++=++..
T Consensus 1 ~~~~~~ls~~ei~~kI~~YN~~~~ 24 (163)
T 3ddc_B 1 GSPEFPPTIQEIKQKIDSYNSREK 24 (163)
T ss_dssp -----CCCHHHHHHHHHHHHHTSC
T ss_pred CCccccCCHHHHHHHHHHHHHhcc
Confidence 579999999999999999877664
No 4
>2hp0_A IDS-epimerase; MMGE/PRPD fold, 6 helix bundle, chorismate mutase like, ISOM; HET: MSE CSO; 1.50A {Agrobacterium tumefaciens} PDB: 2hp3_A*
Probab=57.78 E-value=10 Score=29.62 Aligned_cols=48 Identities=17% Similarity=0.281 Sum_probs=37.3
Q ss_pred CCCCccccCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhcccccccCCcccC
Q 034871 14 PGVEEKFVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCELELQGDVGSI 79 (80)
Q Consensus 14 p~~~EqflT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CELEi~pG~~~~ 79 (80)
.|.|+.-+|.+|+.+|++..+ . .+|. ++++.|++.+..||-.+++..+
T Consensus 417 ~G~p~~Pls~~~l~~KF~~~~-~--------~l~~---------~~~~~i~~~v~~le~~~dv~~l 464 (466)
T 2hp0_A 417 PGSLEDPMDDAHLERKFKDCT-A--------WMPF---------GESGLLFDRLRSLTADQGIKTV 464 (466)
T ss_dssp TTSTTSCCCHHHHHHHHHHHT-T--------TSCT---------THHHHHHHHHHTTTTTCBGGGT
T ss_pred CCCCCCCCCHHHHHHHHHHhc-c--------cCCH---------HHHHHHHHHHhCcccCcchhhc
Confidence 488999999999999999876 2 2544 3677888888888877776654
No 5
>3skq_A Mitochondrial distribution and morphology protein; 14-3-3-like membrane protein, mitochondrial ribosome, respir chain biogenesis; 2.10A {Saccharomyces cerevisiae}
Probab=57.59 E-value=10 Score=28.32 Aligned_cols=29 Identities=34% Similarity=0.433 Sum_probs=23.0
Q ss_pred cccCHHHHHHHHHHHHHhhhccCCCCCCChHhh
Q 034871 19 KFVTEEELKARLKYWLENWAGQVGKGGLPPDLA 51 (80)
Q Consensus 19 qflT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~ 51 (80)
.-+|+++++.||+.||.=.-. ..+|.-|-
T Consensus 164 ~gls~e~LR~~L~~WL~Lsl~----~~vPssLL 192 (249)
T 3skq_A 164 YGVSKEDLVDNLKVWLELRLR----QKIPSVLM 192 (249)
T ss_dssp TTCCHHHHHHHHHHHHHHHHT----SCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHcc----CCCCHHHH
Confidence 348999999999999987754 37887663
No 6
>2l6a_A Nacht, LRR and PYD domains-containing protein 12; NLRP12, pyrin, death domain, signaling protein; NMR {Homo sapiens}
Probab=49.92 E-value=34 Score=21.71 Aligned_cols=48 Identities=29% Similarity=0.348 Sum_probs=35.1
Q ss_pred ccCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhccc
Q 034871 20 FVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCE 69 (80)
Q Consensus 20 flT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CE 69 (80)
-|+++|+. ++|.+|.+ +-.-|...+|..--+-.+..+=|..|+..|.+
T Consensus 21 ~L~~~Elk-kFK~~L~~-~l~~g~~~Ip~~~le~ad~~dLa~lLv~~y~e 68 (102)
T 2l6a_A 21 ELEAVELK-KFKLYLGT-ATELGEGKIPWGSMEKAGPLEMAQLLITHFGP 68 (102)
T ss_dssp TSCHHHHH-HHHHHHHS-CSTTTTCSSCSSTTTTCCHHHHHHHHHHHTCH
T ss_pred HcCHHHHH-HHHHHHcc-cccccCCCCChHHHhcCCHHHHHHHHHHHcCH
Confidence 47788876 77888887 53345567777666668888889999887754
No 7
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, HY initiation factor, nucleus; 2.50A {Homo sapiens}
Probab=49.09 E-value=15 Score=24.45 Aligned_cols=35 Identities=14% Similarity=0.032 Sum_probs=26.9
Q ss_pred CccccCceEEecCCCCcccc---CHHHHHHHHHHHHHh
Q 034871 2 AYSRTETYVLLEPGVEEKFV---TEEELKARLKYWLEN 36 (80)
Q Consensus 2 my~q~D~YVvLEp~~~Eqfl---T~~Ell~~Lk~~L~~ 36 (80)
+|.+.|.|+++.+.--||+= +++.+-+.++.||..
T Consensus 79 ly~dg~~~~fMD~etyeq~~l~l~~~~lgd~~~~~l~e 116 (138)
T 3cpf_A 79 IGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQKYDC 116 (138)
T ss_dssp EEEETTEEEEECTTSCEECCSBCCSHHHHHHHHHHHHH
T ss_pred EEecCCEEEEEcCCCCeEeeecCCHHHHHHHHHHHhhC
Confidence 47788999999998888864 777776777666654
No 8
>2hm2_Q ASC2, pyrin-only protein 1, PAAD-only; pyrin domain, six helix bundle, apoptosis; NMR {Homo sapiens}
Probab=48.94 E-value=30 Score=21.06 Aligned_cols=49 Identities=24% Similarity=0.201 Sum_probs=36.6
Q ss_pred ccCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhccc
Q 034871 20 FVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCE 69 (80)
Q Consensus 20 flT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CE 69 (80)
-|+++|+. ++|..|.+.+-.-|+..+|..--.-.+..+=|..|+..+.+
T Consensus 14 ~L~~~Elk-~FK~~L~~~~~~~~~~~Ip~~~le~a~~~dla~lLv~~y~~ 62 (89)
T 2hm2_Q 14 NLTPEELK-KFKMKLGTVPLREGFERIPRGALGQLDIVDLTDKLVASYYE 62 (89)
T ss_dssp TSCHHHHH-HHHHHTTTSCCCTTCCCCCGGGTTTSCHHHHHHHHHHHHHH
T ss_pred HcCHHHHH-HHHHHHccccccccCCCCChhhcccCCHHHHHHHHHHHcCH
Confidence 36777775 78888888765445567887777778888899988887654
No 9
>2zhy_A ATP:COB(I)alamin adenosyltransferase, putative; helix bundle; 1.80A {Burkholderia thailandensis} PDB: 2zhz_A*
Probab=48.35 E-value=19 Score=25.19 Aligned_cols=42 Identities=38% Similarity=0.722 Sum_probs=31.8
Q ss_pred ccCHHHHHHHHHHHHHhhhccCCCCCCChHhhcc----CCHHHHHHHHHHhcc
Q 034871 20 FVTEEELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (80)
Q Consensus 20 flT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qaq~Lldt~C 68 (80)
-++ ++-.++|+.|+..+.. .||| |..| .|..+++-|+..|.|
T Consensus 83 ~i~-~~~v~~LE~~id~~~~-----~l~p-l~~FILPgg~~~aA~Lh~aRtv~ 128 (183)
T 2zhy_A 83 AIT-DAHLARLDGWLAHYNG-----QLPP-LEEFILPGGARGAALAHVCRTVC 128 (183)
T ss_dssp CCC-HHHHHHHHHHHHHHHH-----TSCC-CCSCCBSCSSHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHHHHh-----hCCC-CcceeeCCCCHHHHHHHHHHHHH
Confidence 355 4668999999998875 4655 5555 588888889999888
No 10
>1ucp_A Pycard, ASC, apoptosis-associated speck-like protein containing A CARD; death domain fold; NMR {Homo sapiens} SCOP: a.77.1.5
Probab=46.68 E-value=33 Score=20.97 Aligned_cols=48 Identities=25% Similarity=0.206 Sum_probs=36.2
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhccc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCE 69 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CE 69 (80)
|+++|+. ++|..|.+.+-.-|+..+|..--.-.+..+=|..|+..+.+
T Consensus 15 L~~~Elk-~FK~~L~~~~l~~g~~~Ip~~~le~a~~~dla~lLv~~y~~ 62 (91)
T 1ucp_A 15 LTAEELK-KFKLKLLSVPLREGYGRIPRGALLSMDALDLTDKLVSFYLE 62 (91)
T ss_dssp SCHHHHH-HHHHHTTTSCCCSSSCCCCHHHHHHCCHHHHHHHHHHTSCH
T ss_pred cCHHHHH-HHHHHHhhccccccCCCCChhhcccCCHHHHHHHHHHHcCH
Confidence 6777765 78888888765445667888776678888889988887754
No 11
>2g2d_A ATP:cobalamin adenosyltransferase; helix bundle, trimer, structural genomics, PSI, protein STRU initiative; 2.00A {Mycobacterium tuberculosis}
Probab=46.64 E-value=26 Score=24.74 Aligned_cols=41 Identities=24% Similarity=0.496 Sum_probs=32.0
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhcc----CCHHHHHHHHHHhcc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qaq~Lldt~C 68 (80)
+++ +-.++|+.|+..+.. .||+ |..| .|..+++-|+..|.|
T Consensus 92 i~~-~~v~~LE~~id~~~~-----~l~p-l~~FILPGG~~~aA~LH~aRtv~ 136 (193)
T 2g2d_A 92 IAQ-SYIDRLEGWCDAYNA-----GLPA-LKSFVLPGGSPLSALLHVARTVV 136 (193)
T ss_dssp CCH-HHHHHHHHHHHHHHT-----TCCC-CSSCEESCSSHHHHHHHHHHHHH
T ss_pred CCH-HHHHHHHHHHHHHHh-----hCCC-CCceeeCCCCHHHHHHHHHHHHH
Confidence 554 558999999999986 5654 4555 588889999999988
No 12
>2k0m_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodospirillum rubrum atcc 11170}
Probab=45.82 E-value=8.7 Score=25.02 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=21.6
Q ss_pred CCccccCHHHHHHHHHHHHHhhhc
Q 034871 16 VEEKFVTEEELKARLKYWLENWAG 39 (80)
Q Consensus 16 ~~EqflT~~Ell~~Lk~~L~~~~~ 39 (80)
-+..|=|..++.+.++++|.+++.
T Consensus 10 G~~~F~s~~~~~~~~k~iL~~y~~ 33 (104)
T 2k0m_A 10 AGHEFARKADALAFMKVMLNRYRP 33 (104)
T ss_dssp TTEEESSHHHHHHHHHHHHHHSCT
T ss_pred CCEecCCHHHHHHHHHHHHHhCCC
Confidence 357899999999999999999985
No 13
>3ke4_A Hypothetical cytosolic protein; helix bundle, transferase; 1.90A {Bacillus cereus} PDB: 3ke5_A*
Probab=43.97 E-value=17 Score=26.28 Aligned_cols=41 Identities=22% Similarity=0.328 Sum_probs=30.0
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhcc----CCHHHHHHHHHHhcc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qaq~Lldt~C 68 (80)
++++ -.+||+.|+..+.. .||+ |..| .|..+++-++..|+|
T Consensus 104 i~~~-~v~~LE~~ID~~~~-----~lpp-l~~FILPGGs~~aA~LHvARTV~ 148 (213)
T 3ke4_A 104 VTIV-MVESLERKIDLYIE-----EAPP-LERFILPGGSEAAATIHIARTVV 148 (213)
T ss_dssp CCHH-HHHHHHHHHHHHHH-----HSCC-CCSCBCSCSSHHHHHHHHHHHHH
T ss_pred CCHH-HHHHHHHHHHHHHh-----cCCC-CCceEeCCCCHHHHHHHHHHHHH
Confidence 4544 45889999998865 4654 5554 588888889999988
No 14
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=42.71 E-value=34 Score=22.20 Aligned_cols=33 Identities=18% Similarity=0.152 Sum_probs=26.0
Q ss_pred cCCCCccccCHHHHHHHHHHHHHhhhccCCCCCCChH
Q 034871 13 EPGVEEKFVTEEELKARLKYWLENWAGQVGKGGLPPD 49 (80)
Q Consensus 13 Ep~~~EqflT~~Ell~~Lk~~L~~~~~~~~~~~LP~d 49 (80)
.|+.+..-+|-+|.+++|..+++++.. +++|-+
T Consensus 22 ~~~~~~~~~sFEeal~eLEeIV~~LE~----gel~LE 54 (100)
T 1vp7_A 22 QTDARPLPQDFETALAELESLVSAMEN----GTLPLE 54 (100)
T ss_dssp ---CCCBCCSHHHHHHHHHHHHHHHHT----TCSCHH
T ss_pred CcccCCCCCCHHHHHHHHHHHHHHHHc----CCCCHH
Confidence 456677789999999999999999986 378865
No 15
>1wvt_A Hypothetical protein ST2180; structural genomics, unknown function; 2.30A {Sulfolobus tokodaii}
Probab=40.33 E-value=29 Score=24.10 Aligned_cols=41 Identities=24% Similarity=0.464 Sum_probs=31.2
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhcc----CCHHHHHHHHHHhcc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qaq~Lldt~C 68 (80)
+++ +-.+||+.|+..+.. .||+ |..| .|..+++-|+..|.|
T Consensus 75 i~~-~~v~~LE~~id~~~~-----~l~p-l~~FILPgg~~~aA~Lh~aRtv~ 119 (172)
T 1wvt_A 75 FSD-EKVKGIEELITNYSK-----ELEP-LRNFVLPGGHIASSFLHLARAVC 119 (172)
T ss_dssp CCT-HHHHHHHHHHHHHHT-----TSCC-CCSCEESCSSHHHHHHHHHHHHH
T ss_pred CCH-HHHHHHHHHHHHHHh-----hCCC-CcceeeCCCCHHHHHHHHHHHHH
Confidence 444 558999999999986 5654 4444 588888889999888
No 16
>1w1n_A Phosphatidylinositol 3-kinase TOR1; target of rapamycin, Ser/Thr kinase, redox-regulation, disulfide bond, transferase; NMR {Saccharomyces cerevisiae} PDB: 2kio_A 2kit_A
Probab=38.45 E-value=6.4 Score=20.85 Aligned_cols=15 Identities=27% Similarity=0.315 Sum_probs=12.2
Q ss_pred CHHHHHHHHHHhccc
Q 034871 55 TIDEAVAFLITNVCE 69 (80)
Q Consensus 55 s~~~qaq~Lldt~CE 69 (80)
|+++|+++||.-+-+
T Consensus 4 sv~~QV~~LI~~At~ 18 (33)
T 1w1n_A 4 DVPEQVDKLIQQATS 18 (33)
T ss_dssp CSTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcC
Confidence 688999999987654
No 17
>3ci3_A Cobalamin adenosyltransferase PDUO-like protein; adenosyltransferase variant, adenosylcobalamin binding, ATP binding; HET: 3PO 5AD B12; 1.11A {Lactobacillus reuteri} PDB: 3ci1_A* 3ci4_A* 2r6t_A* 2r6x_A* 3gah_A* 3gai_A* 3gaj_A*
Probab=36.97 E-value=27 Score=24.67 Aligned_cols=41 Identities=17% Similarity=0.252 Sum_probs=30.4
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhcc----CCHHHHHHHHHHhcc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qaq~Lldt~C 68 (80)
++ ++-.+||+.|+..+.. .||+ |..| .|..+++-|+..|.|
T Consensus 93 i~-~~~v~~LE~~id~~~~-----~l~p-l~~FILPGG~~~aA~LH~aRtv~ 137 (194)
T 3ci3_A 93 KQ-EQPTVWLEEKIDNYTQ-----VVPA-VKKFILPGGTQLASALHVARTIT 137 (194)
T ss_dssp CC-HHHHHHHHHHHHHHHH-----HSCC-CSSCBCSCSSHHHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHHHHHHHh-----hCCC-CCceeeCCCCHHHHHHHHHHHHH
Confidence 45 4667899999998875 4544 3444 588888889999988
No 18
>2idx_A COB(I)yrinic acid A,C-diamide adenosyltransferase; ATP, cobalamin; HET: ATP; 2.50A {Homo sapiens}
Probab=36.68 E-value=26 Score=24.75 Aligned_cols=39 Identities=23% Similarity=0.525 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCChHhhcc----CCHHHHHHHHHHhcc
Q 034871 24 EELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (80)
Q Consensus 24 ~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qaq~Lldt~C 68 (80)
++-.+||+.|+..+.. .||+ |..| .|..+++-|+..|.|
T Consensus 93 ~~~v~~LE~~Id~~~~-----~lpp-l~~FILPGG~~~aA~LH~aRtv~ 135 (196)
T 2idx_A 93 AGPILELEQWIDKYTS-----QLPP-LTAFILPSGGKISSALHFCRAVC 135 (196)
T ss_dssp SHHHHHHHHHHHHHHH-----TSCC-CCSCBCSCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-----hCCC-CCceEECCCCHHHHHHHHHHHHH
Confidence 3667899999999886 5663 5555 588889999999988
No 19
>2nt8_A Cobalamin adenosyltransferase; ATP binding; HET: ATP; 1.68A {Lactobacillus reuteri}
Probab=35.55 E-value=29 Score=25.22 Aligned_cols=41 Identities=17% Similarity=0.252 Sum_probs=30.8
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhcc----CCHHHHHHHHHHhcc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qaq~Lldt~C 68 (80)
++ ++-.+||+.|+..+.. .||+ |..| .|..+++-++.+|.|
T Consensus 122 i~-~~~v~~LE~~Id~~~~-----~lpp-l~~FILPGGs~~aA~LHvaRTv~ 166 (223)
T 2nt8_A 122 KQ-EQPTVWLEEKIDNYTQ-----VVPA-VKKFILPGGTQLASALHVARTIT 166 (223)
T ss_dssp CC-HHHHHHHHHHHHHHHH-----HSCC-CSSCEESCSSHHHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHHHHHHHh-----hCCC-CCceEeCCCCHHHHHHHHHHHHH
Confidence 45 4667899999998875 4554 4444 588888889999888
No 20
>1rty_A YVQK protein; all alpha-helical trimeric protein, structural genomics, PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: a.25.2.2
Probab=35.33 E-value=29 Score=24.46 Aligned_cols=41 Identities=20% Similarity=0.325 Sum_probs=30.3
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhcc----CCHHHHHHHHHHhcc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qaq~Lldt~C 68 (80)
+++ +-.+||+.|+..+.. .||+ |..| .|..+++-|+..|.|
T Consensus 85 i~~-~~v~~LE~~Id~~~~-----~l~p-l~~FILPGG~~~aA~LH~aRtv~ 129 (193)
T 1rty_A 85 LTE-ESVSFLETRIDAYTA-----EAPE-LKKFILPGGSKCASLLHIARTIT 129 (193)
T ss_dssp CCH-HHHHHHHHHHHHHHH-----HSCC-CCSCBCSCSSHHHHHHHHHHHHH
T ss_pred CCH-HHHHHHHHHHHHHHh-----hCCC-CCceeeCCCCHHHHHHHHHHHHH
Confidence 554 557899999998875 4543 3443 588888999999988
No 21
>2ah6_A BH1595, unknown conserved protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bacillus halodurans}
Probab=35.13 E-value=29 Score=24.87 Aligned_cols=41 Identities=15% Similarity=0.285 Sum_probs=30.6
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhcc----CCHHHHHHHHHHhcc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKF----ATIDEAVAFLITNVC 68 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~----~s~~~qaq~Lldt~C 68 (80)
++ ++-.+||+.|+..+.. .||+ |..| .|..+++-++.+|.|
T Consensus 98 i~-~~~v~~LE~~Id~~~~-----~l~p-l~~FILPGG~~~aA~LHvaRTv~ 142 (208)
T 2ah6_A 98 AK-QEIVDFLEQRIDAYIK-----EAPE-LERFILPGGSEAAASLHVCRTIA 142 (208)
T ss_dssp CC-HHHHHHHHHHHHHHHH-----HSCC-CCSCEESCSSHHHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHHHHHHHh-----hCCC-CcceeeCCCCHHHHHHHHHHHHH
Confidence 45 4667899999998875 4554 4444 588888889999888
No 22
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=33.75 E-value=79 Score=20.65 Aligned_cols=32 Identities=9% Similarity=0.176 Sum_probs=24.2
Q ss_pred ceEEecCCCCc-----cccCHHHHHHHHHHHHHhhhc
Q 034871 8 TYVLLEPGVEE-----KFVTEEELKARLKYWLENWAG 39 (80)
Q Consensus 8 ~YVvLEp~~~E-----qflT~~Ell~~Lk~~L~~~~~ 39 (80)
+++++.|+..+ .++++++++++|+..+.+...
T Consensus 104 ~~~fld~~~G~~l~~~~g~~~~~fl~~L~~~l~~~~~ 140 (153)
T 2dlx_A 104 YVSILDPRTGQKLVEWHQLDVSSFLDQVTGFLGEHGQ 140 (153)
T ss_dssp EEEEECTTTCCCCEEESSCCHHHHHHHHHHHHHHTCS
T ss_pred EEEEEeCCCCcEeeecCCCCHHHHHHHHHHHHHhcCC
Confidence 67888775221 248999999999999998853
No 23
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=33.02 E-value=72 Score=18.45 Aligned_cols=32 Identities=13% Similarity=-0.047 Sum_probs=23.3
Q ss_pred CceEEecCCCC-----ccccCHHHHHHHHHHHHHhhh
Q 034871 7 ETYVLLEPGVE-----EKFVTEEELKARLKYWLENWA 38 (80)
Q Consensus 7 D~YVvLEp~~~-----EqflT~~Ell~~Lk~~L~~~~ 38 (80)
-+++++.+|.. .-..+.+++.++|...+.+.+
T Consensus 91 Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~~~~ 127 (130)
T 2dml_A 91 PTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRSGP 127 (130)
T ss_dssp SEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHHHSS
T ss_pred CEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHhcCC
Confidence 35677777654 225689999999999887654
No 24
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=31.75 E-value=34 Score=24.17 Aligned_cols=47 Identities=15% Similarity=0.235 Sum_probs=33.2
Q ss_pred CceEEecCCCCccccCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhccc
Q 034871 7 ETYVLLEPGVEEKFVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCE 69 (80)
Q Consensus 7 D~YVvLEp~~~EqflT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CE 69 (80)
|.|+||-.+-==..|+.+|+.+.++..+... .+.+++|+.|++.+.+
T Consensus 237 d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~----------------~~~~~~a~~Lv~~A~~ 283 (307)
T 2p8e_A 237 DEFIILACDGIWDVMSNEELCEYVKSRLEVS----------------DDLENVCNWVVDTCLH 283 (307)
T ss_dssp EEEEEEECHHHHTTSCHHHHHHHHHHHHTTC----------------CCHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCcccCCCHHHHHHHHHHHHhcC----------------CCHHHHHHHHHHHHHH
Confidence 4577777755556789999988877655322 4567889999987743
No 25
>2qjz_A Microtubule-associated protein RP/EB family member 1; calponin homology domain, microtubule plus END, +TIP, protein binding; 1.25A {Homo sapiens} SCOP: a.40.1.1 PDB: 1pa7_A 1ueg_A 3co1_A 1v5k_A
Probab=31.02 E-value=32 Score=22.73 Aligned_cols=18 Identities=11% Similarity=0.113 Sum_probs=15.7
Q ss_pred cccCHHHHHHHHHHHHHh
Q 034871 19 KFVTEEELKARLKYWLEN 36 (80)
Q Consensus 19 qflT~~Ell~~Lk~~L~~ 36 (80)
.++|..|+++|+.+.|..
T Consensus 3 ~~~sr~ElL~WIN~~L~~ 20 (123)
T 2qjz_A 3 DNLSRHDMLAWINESLQL 20 (123)
T ss_dssp CCCCHHHHHHHHHHHHTC
T ss_pred ccccHHHHHHHHHHHHCC
Confidence 578999999999999854
No 26
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=30.63 E-value=32 Score=23.25 Aligned_cols=24 Identities=17% Similarity=0.309 Sum_probs=18.6
Q ss_pred CccccCHHHHHHHHHHHHHhhhcc
Q 034871 17 EEKFVTEEELKARLKYWLENWAGQ 40 (80)
Q Consensus 17 ~EqflT~~Ell~~Lk~~L~~~~~~ 40 (80)
|++-.|.+|+++.|+.++..|..+
T Consensus 300 P~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 300 AEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp GGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred hhhCcchHHHHHHHHHHHHHHHhc
Confidence 455569999999999999888753
No 27
>2kn6_A Apoptosis-associated speck-like protein containin; multidomain modular protein structure, interdomain mobility, domain, inflammation; NMR {Homo sapiens}
Probab=28.99 E-value=1.3e+02 Score=21.25 Aligned_cols=48 Identities=25% Similarity=0.206 Sum_probs=36.6
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhccc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCE 69 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CE 69 (80)
|+++|+. ++|..|.+.+-.-|+..+|..--+-.+..+-|..|+..+.+
T Consensus 35 L~~~Elk-kFK~~L~~~~l~~g~~~Ip~~~le~ad~~dla~lLv~~y~~ 82 (215)
T 2kn6_A 35 LTAEELK-KFKLKLLSVPLREGYGRIPRGALLSMDALDLTDKLVSFYLE 82 (215)
T ss_dssp SCHHHHH-HHHHHHHHSCCSSCCCCCCHHHHHHSCHHHHHHHHHHHSCH
T ss_pred cCHHHHH-HHHHHHhhccccccCCCCChhhhhcCCHHHHHHHHHHHcCh
Confidence 6777765 78888988765556678888777777888888888887754
No 28
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=28.48 E-value=37 Score=23.37 Aligned_cols=20 Identities=30% Similarity=0.556 Sum_probs=15.3
Q ss_pred ccCceEEecCCCCccccCHHHHHHH
Q 034871 5 RTETYVLLEPGVEEKFVTEEELKAR 29 (80)
Q Consensus 5 q~D~YVvLEp~~~EqflT~~Ell~~ 29 (80)
++|.|||++ .|+|++|+.+.
T Consensus 13 ~~dGyvvl~-----~~l~~e~v~~l 32 (291)
T 2opw_A 13 QQDGFLVLE-----GFLSAEECVAM 32 (291)
T ss_dssp HHHSEEEET-----TSSCHHHHHHH
T ss_pred HhCCEEEec-----CCCCHHHHHHH
Confidence 678999995 68988775543
No 29
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=28.04 E-value=57 Score=17.99 Aligned_cols=18 Identities=17% Similarity=0.067 Sum_probs=10.3
Q ss_pred hHhhccCCHHHHHHHHHH
Q 034871 48 PDLAKFATIDEAVAFLIT 65 (80)
Q Consensus 48 ~dL~k~~s~~~qaq~Lld 65 (80)
.++-+.+|+.+-|.|+..
T Consensus 68 ~~~~~~~ti~~la~~l~~ 85 (88)
T 2afd_A 68 VLIFNYPTIAQLAKRLGE 85 (88)
T ss_dssp GGTTTCCSHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHH
Confidence 445555666666666543
No 30
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=27.54 E-value=39 Score=23.47 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=26.1
Q ss_pred Ccccc-CceEEecCCCCccc---cCHH-HHHHHHHHHHHh
Q 034871 2 AYSRT-ETYVLLEPGVEEKF---VTEE-ELKARLKYWLEN 36 (80)
Q Consensus 2 my~q~-D~YVvLEp~~~Eqf---lT~~-Ell~~Lk~~L~~ 36 (80)
+|.+. +.|++|.+.--||+ |.++ +|-.+++.+|..
T Consensus 101 LY~d~d~~~~fMD~etyeQ~~l~lp~~~~lg~~i~~~l~e 140 (167)
T 3hks_A 101 IDITEDGFVSLLTDSGGTKDDLKLPTDDGLTAQMRLGFDE 140 (167)
T ss_dssp EEECTTSBEEEECTTSCEECCCBCCSCHHHHHHHHHHHHT
T ss_pred EEECCCCEEEEEcCCCceEEEEecCchHHHHHHHHHHhhC
Confidence 46423 68999999988995 6666 788888777753
No 31
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=27.40 E-value=39 Score=23.57 Aligned_cols=28 Identities=14% Similarity=0.012 Sum_probs=20.1
Q ss_pred ccCceEEecCCCCccccCHHHHHHHHHHHHHhh
Q 034871 5 RTETYVLLEPGVEEKFVTEEELKARLKYWLENW 37 (80)
Q Consensus 5 q~D~YVvLEp~~~EqflT~~Ell~~Lk~~L~~~ 37 (80)
++|.|||++ .+++++++.+..+.+...+
T Consensus 19 ~~dGyvvl~-----~~l~~e~v~~l~~~~~~~l 46 (313)
T 2fct_A 19 EKNGFIGPF-----DAYSPEEMKETWKRTRLRL 46 (313)
T ss_dssp HHHSEEEEE-----ESSCHHHHHHHHHHHHHHH
T ss_pred HhCCEEECC-----CCCCHHHHHHHHHHHHHHH
Confidence 678999994 6999888766655554433
No 32
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=26.72 E-value=49 Score=23.19 Aligned_cols=50 Identities=10% Similarity=0.074 Sum_probs=33.9
Q ss_pred cCceEEecCCCCccccCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhcccc
Q 034871 6 TETYVLLEPGVEEKFVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCEL 70 (80)
Q Consensus 6 ~D~YVvLEp~~~EqflT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CEL 70 (80)
.|.|+||-.+-==..|+.+|+...++..+... -.+.++.|+.|++.+..-
T Consensus 235 ~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~---------------~~~~~~~a~~L~~~a~~~ 284 (304)
T 2i0o_A 235 EDEFMVLACDGIWNFMTSEQVVQFVQERINKP---------------GMKLSKICEELFDHCLAP 284 (304)
T ss_dssp TEEEEEEECHHHHTTCCHHHHHHHHHHHHTST---------------TCCHHHHHHHHHHHHC--
T ss_pred CCeEEEEECcCccccCCHHHHHHHHHHHHhhc---------------CCCHHHHHHHHHHHHHHh
Confidence 45677777654445789999888877665431 146788899999877653
No 33
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=26.67 E-value=56 Score=17.62 Aligned_cols=39 Identities=15% Similarity=0.126 Sum_probs=25.1
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHh
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITN 66 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt 66 (80)
|...++..+|+..+.- .--+.++.+++|+.+-++++...
T Consensus 36 l~~~~l~~~le~~~gi-------~i~~~~~~~~~tv~~l~~~i~~~ 74 (77)
T 2ehs_A 36 LDVVELIMAFEEEFGI-------EIPDEDAEKIQTVGDVINYLKEK 74 (77)
T ss_dssp HHHHHHHHHHHHHHTC-------CCCHHHHHTCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC-------ccCHHHHHHcCCHHHHHHHHHHH
Confidence 3445666666655421 12345688999999999988654
No 34
>1pn5_A Nacht-, LRR- and PYD-containing protein 2; alpha-helix bundle, apoptosis; NMR {Homo sapiens} SCOP: a.77.1.5
Probab=25.88 E-value=1.2e+02 Score=21.02 Aligned_cols=48 Identities=25% Similarity=0.324 Sum_probs=35.6
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhccc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCE 69 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CE 69 (80)
|+++|+. ++|.+|.+.+-.-|+..+|..--+-.+..+-|..|+..+.+
T Consensus 74 L~keELK-kFK~~L~~~~l~~g~~~IP~~eLEkAd~~dLAdLLV~~Yge 121 (159)
T 1pn5_A 74 LKKEELK-EFQLLLANKAHSRSSSGETPAQPEKTSGMEVASYLVAQYGE 121 (159)
T ss_dssp CCHHHHH-HHHHHHHHHCTTCCSSCSCSSCCCCCSHHHHHHHHHHHTCH
T ss_pred cCHHHHH-HHHHHhcccccccCCCCCChhhhhcCCHHHHHHHHHHHcCH
Confidence 6777764 67888888775455667887777677888888888887654
No 35
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=25.84 E-value=82 Score=17.44 Aligned_cols=37 Identities=14% Similarity=0.125 Sum_probs=24.0
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCC-hHhhccCCHHHHHHHHHH
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLP-PDLAKFATIDEAVAFLIT 65 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP-~dL~k~~s~~~qaq~Lld 65 (80)
|..-|+..+|+..+.- .+| .++.++.|+.+-+.|+..
T Consensus 39 l~~vel~~~le~~fgi--------~i~~~~~~~~~Tv~~l~~~i~~ 76 (82)
T 2ava_A 39 LDTVEIVMNLEEEFGI--------NVDEDKAQDISTIQQAADVIEG 76 (82)
T ss_dssp SCHHHHHHHHHHHTTC--------CCCGGGSSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC--------ccCHHHHHhCCCHHHHHHHHHH
Confidence 4556666666665521 233 457788899888888764
No 36
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=25.73 E-value=82 Score=17.59 Aligned_cols=17 Identities=6% Similarity=0.278 Sum_probs=10.6
Q ss_pred cCHHHHHHHHHHHHHhh
Q 034871 21 VTEEELKARLKYWLENW 37 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~ 37 (80)
+|.+++.++++.+++..
T Consensus 5 m~~~~i~~~l~~~i~~~ 21 (84)
T 2kwl_A 5 MDNDEIFSKVRSIISEQ 21 (84)
T ss_dssp STHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 56666666666666654
No 37
>3lhr_A Zinc finger protein 24; SCAN domain, protein structure initiative, center for eukary structural genomics, PSI-2, CESG, nucleus, phosphoprotein; 1.90A {Homo sapiens} SCOP: a.28.3.0
Probab=25.64 E-value=12 Score=23.86 Aligned_cols=7 Identities=29% Similarity=0.368 Sum_probs=3.7
Q ss_pred cCHHHHH
Q 034871 21 VTEEELK 27 (80)
Q Consensus 21 lT~~Ell 27 (80)
=|+++++
T Consensus 43 htKEQil 49 (93)
T 3lhr_A 43 HTKEQIL 49 (93)
T ss_dssp SCHHHHH
T ss_pred CCHHHHH
Confidence 4555554
No 38
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.55 E-value=91 Score=19.96 Aligned_cols=41 Identities=17% Similarity=0.208 Sum_probs=26.7
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCC-hHhhccCCHHHHHHHHHHhcc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLP-PDLAKFATIDEAVAFLITNVC 68 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP-~dL~k~~s~~~qaq~Lldt~C 68 (80)
|....|..+|+..+... .+| .+|-..+|+.+.|+++.+...
T Consensus 58 Lla~rLv~~ir~~~g~v-------~l~l~~Lf~~pTl~~lA~~l~~~~~ 99 (110)
T 2cq8_A 58 VDVVRLVEEVKELCDGL-------ELENEDVYMASTFGDFIQLLVRKLR 99 (110)
T ss_dssp THHHHHHHHHHHHHTSC-------CCCHHHHHHCCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC-------CcCHHHHHhCCCHHHHHHHHHHHhc
Confidence 33445555555444212 455 678889999999999987655
No 39
>2drn_C 24-residues peptide from AN A-kinase anchoring protein; AKAP, PKA, signal transduction, 4-helix bundle, helix- loop-helix; NMR {Rattus norvegicus}
Probab=25.39 E-value=43 Score=17.23 Aligned_cols=15 Identities=27% Similarity=0.379 Sum_probs=12.3
Q ss_pred CCHHHHHHHHHHhcc
Q 034871 54 ATIDEAVAFLITNVC 68 (80)
Q Consensus 54 ~s~~~qaq~Lldt~C 68 (80)
+|++++|.+.+|.+-
T Consensus 1 dsIEEaA~RIVdaVi 15 (26)
T 2drn_C 1 DLIEEAASRIVDAVI 15 (26)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH
Confidence 489999999998753
No 40
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=25.20 E-value=39 Score=23.58 Aligned_cols=22 Identities=5% Similarity=0.359 Sum_probs=16.3
Q ss_pred ccCceEEecCCCCccccCHHHHHHHHH
Q 034871 5 RTETYVLLEPGVEEKFVTEEELKARLK 31 (80)
Q Consensus 5 q~D~YVvLEp~~~EqflT~~Ell~~Lk 31 (80)
++|.|||++ .|++++++.+..+
T Consensus 32 ~~dGyvvl~-----~~l~~e~v~~l~~ 53 (308)
T 2a1x_A 32 EENGFLVIK-----NLVPDADIQRFRN 53 (308)
T ss_dssp HHHSEEEET-----TCSCHHHHHHHHH
T ss_pred HhCCEEEcc-----CCCCHHHHHHHHH
Confidence 678999995 6899887655433
No 41
>1wyo_A Protein EB3, microtubule-associated protein RP/EB family member 3; CH domain, microtubule-binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.14 E-value=39 Score=23.44 Aligned_cols=24 Identities=13% Similarity=0.120 Sum_probs=19.2
Q ss_pred cCCCCccccCHHHHHHHHHHHHHh
Q 034871 13 EPGVEEKFVTEEELKARLKYWLEN 36 (80)
Q Consensus 13 Ep~~~EqflT~~Ell~~Lk~~L~~ 36 (80)
-+...-.+.+..|+++|+.+.|..
T Consensus 14 ~t~~~~~~~sr~ElL~WIN~~L~~ 37 (159)
T 1wyo_A 14 STSVTSENLSRHDMLAWVNDSLHL 37 (159)
T ss_dssp CCSSCCCCCCHHHHHHHHHHHSCC
T ss_pred eccCCCCchhHHHHHHHHHHHHCC
Confidence 345567889999999999988843
No 42
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=24.79 E-value=62 Score=17.74 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHhhhccCCCCCCC-hHhhccCCHHHHHHHHHHh
Q 034871 22 TEEELKARLKYWLENWAGQVGKGGLP-PDLAKFATIDEAVAFLITN 66 (80)
Q Consensus 22 T~~Ell~~Lk~~L~~~~~~~~~~~LP-~dL~k~~s~~~qaq~Lldt 66 (80)
..-|+..+|+..+. . .+| .++.+++|+.+-+.|+...
T Consensus 39 ~~~el~~~le~~fg-i-------~i~~~~l~~~~Tv~~l~~~i~~~ 76 (78)
T 1l0i_A 39 DTVELVMALEEEFD-T-------EIPDEEAEKMTTVQAAIDYINGH 76 (78)
T ss_dssp HHHHHHHHHHHHHT-C-------CCCHHHHTTCCBHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC-C-------CCCHHHHHHcCCHHHHHHHHHHh
Confidence 34556666655542 1 344 4678899999999888653
No 43
>1p68_A De novo designed protein S-824; four helix bundle, de novo protein; NMR {Escherichia coli} SCOP: k.8.1.1 PDB: 2jua_A
Probab=24.58 E-value=97 Score=20.05 Aligned_cols=45 Identities=31% Similarity=0.593 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhcccccccCCcc
Q 034871 24 EELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCELELQGDVG 77 (80)
Q Consensus 24 ~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CELEi~pG~~ 77 (80)
++|.+.||++-.+|.+ |+|+| -+++.-.|-.|+..-++--++|-|
T Consensus 10 edlqevlknlhknwhg--gkdnl-------hdvdnhlqnviedihdfmqgggsg 54 (102)
T 1p68_A 10 EDLQEVLKNLHKNWHG--GKDNL-------HDVDNHLQNVIEDIHDFMQGGGSG 54 (102)
T ss_dssp HHHHHHHHHHHTTSSS--CSTTT-------HHHHHHHHHHHHHHHTTTTTSSTT
T ss_pred HHHHHHHHHHHhcccC--Cccch-------hhHHHHHHHHHHHHHHHHhcCCcc
Confidence 4566777777777765 45555 457778888888888877777665
No 44
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=24.38 E-value=42 Score=22.96 Aligned_cols=27 Identities=15% Similarity=0.326 Sum_probs=17.8
Q ss_pred ccCceEEecCCCCccccCHHHHHH---HHHHHHHh
Q 034871 5 RTETYVLLEPGVEEKFVTEEELKA---RLKYWLEN 36 (80)
Q Consensus 5 q~D~YVvLEp~~~EqflT~~Ell~---~Lk~~L~~ 36 (80)
++|.|||++ .|++++++.+ .+..++.+
T Consensus 29 ~~dGyvvl~-----~~l~~e~v~~l~~~~~~~~~~ 58 (288)
T 2rdq_A 29 EEHGYLFLR-----NVLDRDLVKTVAEQMREGLVA 58 (288)
T ss_dssp HHHSEEEEC-----SCSCHHHHHHHHHHHHHHHHH
T ss_pred HhCCEEEEe-----CCCCHHHHHHHHHHHHHHHHh
Confidence 678999995 5888876543 34444443
No 45
>1t0c_A Insulin; type I beta-turn, BEND, type III' beta-turn, hormone/growth factor complex; NMR {Homo sapiens}
Probab=23.65 E-value=29 Score=18.38 Aligned_cols=13 Identities=38% Similarity=0.368 Sum_probs=9.2
Q ss_pred ccccccCCcccCC
Q 034871 68 CELELQGDVGSIQ 80 (80)
Q Consensus 68 CELEi~pG~~~~~ 80 (80)
-||-=+||-||.|
T Consensus 10 velgggpgagslq 22 (31)
T 1t0c_A 10 VELGGGPGAGSLQ 22 (31)
T ss_dssp TSCCCSTTSSSCS
T ss_pred EEecCCCCccccc
Confidence 3555678888887
No 46
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=23.39 E-value=85 Score=17.28 Aligned_cols=17 Identities=12% Similarity=0.444 Sum_probs=9.9
Q ss_pred hHhhccCCHHHHHHHHH
Q 034871 48 PDLAKFATIDEAVAFLI 64 (80)
Q Consensus 48 ~dL~k~~s~~~qaq~Ll 64 (80)
.++.++.|+.+-+.++.
T Consensus 61 ~~~~~~~Tv~~l~~~i~ 77 (81)
T 2lol_A 61 DEATKIKTVSDVIKYIK 77 (81)
T ss_dssp GGGGGSSSHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH
Confidence 34556666666666554
No 47
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=22.84 E-value=1.5e+02 Score=18.60 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=17.8
Q ss_pred ccCHHHHHHHHHHHHHhhhc
Q 034871 20 FVTEEELKARLKYWLENWAG 39 (80)
Q Consensus 20 flT~~Ell~~Lk~~L~~~~~ 39 (80)
+.++++++++|+.+|.+...
T Consensus 133 ~~~~~~l~~~l~~~l~~~~~ 152 (164)
T 1sen_A 133 YVSAEQVVQGMKEAQERLTG 152 (164)
T ss_dssp CCSHHHHHHHHHHHHHHHGG
T ss_pred cCCHHHHHHHHHHHHHhccH
Confidence 47899999999999999875
No 48
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=22.43 E-value=1e+02 Score=22.54 Aligned_cols=40 Identities=23% Similarity=0.402 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCChHhhccCCH---HHHHHHHHHhccc
Q 034871 23 EEELKARLKYWLENWAGQVGKGGLPPDLAKFATI---DEAVAFLITNVCE 69 (80)
Q Consensus 23 ~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~---~~qaq~Lldt~CE 69 (80)
+++..+++++++.+. .+|..|..+.-- ++....+.+.++.
T Consensus 299 ~~~~~~~i~~l~~~~-------glP~~l~~lgi~~~~~~~~~~~a~~a~~ 341 (376)
T 1kq3_A 299 PRKMIEEVYSFCEEV-------GLPTTLAEIGLDGVSDEDLMKVAEKACD 341 (376)
T ss_dssp CHHHHHHHHHHHHHH-------TCCCSGGGGTCTTCCHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHc-------CCCCCHHHcCCCCCCHHHHHHHHHHHhc
Confidence 356788999999998 688877765433 5677777777664
No 49
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=22.22 E-value=32 Score=26.57 Aligned_cols=32 Identities=6% Similarity=0.137 Sum_probs=24.3
Q ss_pred cCceEEecCCCCccccCHHHHHHHHHHHHHhh
Q 034871 6 TETYVLLEPGVEEKFVTEEELKARLKYWLENW 37 (80)
Q Consensus 6 ~D~YVvLEp~~~EqflT~~Ell~~Lk~~L~~~ 37 (80)
.|.|+||-.+-==.+||.+|+...+..++...
T Consensus 338 ~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~ 369 (467)
T 2pnq_A 338 QDKFLVLATDGLWETMHRQDVVRIVGEYLTGM 369 (467)
T ss_dssp TEEEEEEECHHHHTTSCHHHHHHHHHHHHTTC
T ss_pred CCeEEEEEecCccccCChHHHHHHHHHHHhhc
Confidence 45677676655556789999999999998754
No 50
>1szq_A 2-methylcitrate dehydratase; propionate catabolism, 2-methylcitric acid cycle structural genomics target, NYSGXRC, PSI; 2.70A {Escherichia coli} SCOP: e.44.1.1
Probab=21.11 E-value=65 Score=24.94 Aligned_cols=24 Identities=17% Similarity=0.054 Sum_probs=20.8
Q ss_pred CCCC-ccccCHHHHHHHHHHHHHhh
Q 034871 14 PGVE-EKFVTEEELKARLKYWLENW 37 (80)
Q Consensus 14 p~~~-EqflT~~Ell~~Lk~~L~~~ 37 (80)
.|.| +.-+|.+|+.+|++..+...
T Consensus 426 ~G~~~~~P~s~~~l~~KF~~~~~~~ 450 (483)
T 1szq_A 426 IGHARRRQDGIPKLVDKFKINLARQ 450 (483)
T ss_dssp TTSGGGHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCChHHHHHHHHHHhhcc
Confidence 3788 99999999999999988754
No 51
>2zc2_A DNAD-like replication protein; GI 24377835, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Streptococcus mutans UA159}
Probab=21.09 E-value=78 Score=18.14 Aligned_cols=24 Identities=25% Similarity=0.316 Sum_probs=17.0
Q ss_pred cccCHHHHHHHHHHHHHhhhccCCCCCCChHh
Q 034871 19 KFVTEEELKARLKYWLENWAGQVGKGGLPPDL 50 (80)
Q Consensus 19 qflT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL 50 (80)
++||+.|+ +.+..|+... .+|+++
T Consensus 16 r~ls~~e~-~~i~~w~~~~-------~~~~el 39 (78)
T 2zc2_A 16 RMLSPFEL-EDLQKTVSDD-------KTDPDL 39 (78)
T ss_dssp SCCCHHHH-HHHHHHHTTT-------CCCHHH
T ss_pred CCCCHHHH-HHHHHHHHHh-------CCCHHH
Confidence 47888885 4678888776 577754
No 52
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=20.99 E-value=99 Score=18.04 Aligned_cols=15 Identities=0% Similarity=-0.064 Sum_probs=12.3
Q ss_pred ccCHHHHHHHHHHHH
Q 034871 20 FVTEEELKARLKYWL 34 (80)
Q Consensus 20 flT~~Ell~~Lk~~L 34 (80)
.++.+++.++|+.+.
T Consensus 118 ~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 118 KMSDQGIYDFFAKIT 132 (133)
T ss_dssp GSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhc
Confidence 789999999888753
No 53
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=20.69 E-value=66 Score=23.91 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=32.8
Q ss_pred CceEEecCCCCccccCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhccc
Q 034871 7 ETYVLLEPGVEEKFVTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCE 69 (80)
Q Consensus 7 D~YVvLEp~~~EqflT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CE 69 (80)
|.|+||-.+-==..||.+|+...++..+... .+.++.|+.|++.+..
T Consensus 231 dd~llLaSDGlwd~ls~~ei~~~v~~~~~~~----------------~~~~~~a~~Lv~~A~~ 277 (382)
T 1a6q_A 231 DQFIILACDGIWDVMGNEELCDFVRSRLEVT----------------DDLEKVCNEVVDTCLY 277 (382)
T ss_dssp EEEEEEECHHHHTTSCHHHHHHHHHHHHTTC----------------CCHHHHHHHHHHHHHH
T ss_pred CeEEEEeccCccCCCChHHHHHHHHHHHhcC----------------CCHHHHHHHHHHHHHh
Confidence 4577776654445789999988887665322 4567889999987753
No 54
>3qf2_A Nacht, LRR and PYD domains-containing protein 3; six helix bundle, apoptosis; 1.70A {Homo sapiens}
Probab=20.46 E-value=1.7e+02 Score=18.55 Aligned_cols=48 Identities=23% Similarity=0.275 Sum_probs=34.1
Q ss_pred cCHHHHHHHHHHHHHhhhccCCCCCCChHhhccCCHHHHHHHHHHhccc
Q 034871 21 VTEEELKARLKYWLENWAGQVGKGGLPPDLAKFATIDEAVAFLITNVCE 69 (80)
Q Consensus 21 lT~~Ell~~Lk~~L~~~~~~~~~~~LP~dL~k~~s~~~qaq~Lldt~CE 69 (80)
|+++|+ .++|.+|.+.+-.-|+..+|..--+-.+..+-|..|+..+.+
T Consensus 15 L~~eEl-kkFK~~L~~~~~~~g~~~Ip~~~le~ad~~dLA~lLv~~y~~ 62 (110)
T 3qf2_A 15 LEDVDL-KKFKMHLEDYPPQKGCIPLPRGQTEKADHVDLATLMIDFNGE 62 (110)
T ss_dssp CCHHHH-HHHHHHHHTCCSSSSCCCCCHHHHHHCCHHHHHHHHHHHHCH
T ss_pred cCHHHH-HHHHHHHcccccccCCCCCCHHHHhcCCHHHHHHHHHHHcCH
Confidence 666675 467889988764445567887655556788888888887754
No 55
>3er0_A Eukaryotic translation initiation factor 5A-2; yeast, low resolution, acetylation, hypusine, phosphoprotein, protein biosynthesis; 3.35A {Saccharomyces cerevisiae}
Probab=20.42 E-value=20 Score=24.93 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=23.9
Q ss_pred CccccCceEEec--CCCCccc-cCHHHHHHHHHHHHH
Q 034871 2 AYSRTETYVLLE--PGVEEKF-VTEEELKARLKYWLE 35 (80)
Q Consensus 2 my~q~D~YVvLE--p~~~Eqf-lT~~Ell~~Lk~~L~ 35 (80)
+|.+.|.||++. +..-||+ |+++++-..++.||.
T Consensus 103 LY~dg~~~~FMD~~~etyeqi~l~~~~lgd~i~~~l~ 139 (167)
T 3er0_A 103 LDIDDGFLSLMNMDGDTKDDVKAPEGELGDSLQTAFD 139 (167)
T ss_dssp CCCTTTTCCCCCSSSCCCSCCCCCCSSHHHHHHHTTS
T ss_pred EEEcCCEEEEEeCCCCeeEEEEcCHHHHHHHHHHHhh
Confidence 577789999999 5666665 555666666766663
No 56
>2do5_A Splicing factor 3B subunit 2; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.32 E-value=1.5e+02 Score=17.65 Aligned_cols=16 Identities=31% Similarity=0.399 Sum_probs=10.8
Q ss_pred CHHHHHHHHHHHHHhh
Q 034871 22 TEEELKARLKYWLENW 37 (80)
Q Consensus 22 T~~Ell~~Lk~~L~~~ 37 (80)
+.+||+++||.+..+.
T Consensus 30 ~REElvdRLk~Y~~Qt 45 (58)
T 2do5_A 30 NREELVERLQSYTRQT 45 (58)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhhcc
Confidence 4677777777775543
No 57
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=20.19 E-value=25 Score=26.57 Aligned_cols=12 Identities=33% Similarity=0.357 Sum_probs=10.0
Q ss_pred cccccccCCccc
Q 034871 67 VCELELQGDVGS 78 (80)
Q Consensus 67 ~CELEi~pG~~~ 78 (80)
..-||||||.|.
T Consensus 60 ~~VlEIGPG~G~ 71 (353)
T 1i4w_A 60 LKVLDLYPGVGI 71 (353)
T ss_dssp CEEEEESCTTCH
T ss_pred CEEEEECCCCCH
Confidence 346999999996
No 58
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=20.11 E-value=77 Score=19.03 Aligned_cols=31 Identities=19% Similarity=0.118 Sum_probs=22.1
Q ss_pred ceEEecCCCC----ccccCHHHHHHHHHHHHHhhh
Q 034871 8 TYVLLEPGVE----EKFVTEEELKARLKYWLENWA 38 (80)
Q Consensus 8 ~YVvLEp~~~----EqflT~~Ell~~Lk~~L~~~~ 38 (80)
+++++..|+. .-..+.+++.+||+..+.+.|
T Consensus 112 t~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 146 (148)
T 3p2a_A 112 TIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSRDP 146 (148)
T ss_dssp EEEEEETTEEEEEESSCCCHHHHHHHHHHHHHSCC
T ss_pred EEEEEECCeEEEEEeCCCCHHHHHHHHHHHhcccC
Confidence 5666655542 225789999999999988654
No 59
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=20.03 E-value=56 Score=23.54 Aligned_cols=18 Identities=17% Similarity=0.530 Sum_probs=13.9
Q ss_pred ccCceEEecCCCCccccCHHHHH
Q 034871 5 RTETYVLLEPGVEEKFVTEEELK 27 (80)
Q Consensus 5 q~D~YVvLEp~~~EqflT~~Ell 27 (80)
+.|.|||++ .++|++|+.
T Consensus 44 ~~dGyvvi~-----~~ls~eev~ 61 (310)
T 3emr_A 44 EKNGFLQIK-----NFFSEDEVI 61 (310)
T ss_dssp HHHSEEEET-----TCSCHHHHH
T ss_pred HhCCEEEcc-----CCCCHHHHH
Confidence 678999995 688887654
No 60
>2fi2_A Zinc finger protein 42; SCAN domain, ZNF-42, MZF-1, homodimer, transcription factor, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.28.3.2
Probab=20.02 E-value=18 Score=23.44 Aligned_cols=8 Identities=38% Similarity=0.443 Sum_probs=3.5
Q ss_pred CCHHHHHH
Q 034871 54 ATIDEAVA 61 (80)
Q Consensus 54 ~s~~~qaq 61 (80)
.|.++++.
T Consensus 76 ~s~eeav~ 83 (94)
T 2fi2_A 76 GSPEEAAA 83 (94)
T ss_dssp CSHHHHHH
T ss_pred CcHHHHHH
Confidence 34444443
Done!