Query 034875
Match_columns 80
No_of_seqs 105 out of 148
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 11:47:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3top_A Maltase-glucoamylase, i 99.9 7.7E-26 2.6E-30 189.3 9.3 79 1-80 213-292 (908)
2 3l4y_A Maltase-glucoamylase, i 99.9 1.1E-24 3.6E-29 181.5 8.7 79 1-80 211-291 (875)
3 3lpp_A Sucrase-isomaltase; gly 99.9 4.7E-24 1.6E-28 178.0 8.7 79 1-80 239-319 (898)
4 3nsx_A Alpha-glucosidase; stru 99.9 2.6E-22 8.7E-27 162.5 8.4 77 1-80 85-164 (666)
5 2g3m_A Maltase, alpha-glucosid 99.8 1.8E-21 6.1E-26 157.8 8.7 76 1-80 96-176 (693)
6 2x2h_A Alpha-1,4-glucan lyase 99.8 9.4E-21 3.2E-25 159.8 8.6 78 2-80 253-354 (1027)
7 4ba0_A Alpha-glucosidase, puta 99.8 5.1E-19 1.7E-23 146.1 8.2 74 2-80 187-263 (817)
8 2f2h_A Putative family 31 gluc 99.8 4.9E-19 1.7E-23 145.3 7.5 72 2-80 192-268 (773)
9 2xvl_A Alpha-xylosidase, putat 99.5 9.9E-15 3.4E-19 123.6 7.2 38 40-80 393-434 (1020)
10 1zy9_A Alpha-galactosidase; TM 98.3 9.9E-07 3.4E-11 70.4 6.7 67 9-80 116-192 (564)
11 2yfo_A Alpha-galactosidase-suc 76.5 6.8 0.00023 32.0 6.6 72 5-77 227-322 (720)
12 2cjj_A Radialis; plant develop 40.7 18 0.00061 22.5 2.3 25 55-79 42-74 (93)
13 4gow_A Potassium voltage-gated 38.1 6.7 0.00023 24.0 0.0 11 58-68 36-46 (72)
14 1k4u_P Phagocyte NADPH oxidase 36.4 12 0.0004 19.7 0.8 18 55-72 9-26 (32)
15 4gqc_A Thiol peroxidase, perox 35.8 19 0.00064 22.9 1.9 52 18-73 104-162 (164)
16 2cqq_A RSGI RUH-037, DNAJ homo 35.7 26 0.0009 20.6 2.4 22 57-78 43-71 (72)
17 1ym0_B Fibrinotic enzyme compo 33.8 6.7 0.00023 19.7 -0.4 14 63-77 13-26 (27)
18 1hle_B Horse leukocyte elastas 30.3 19 0.00065 17.7 1.0 11 5-15 6-16 (31)
19 2xn6_B Thyroxine-binding globu 28.1 24 0.00083 17.8 1.2 11 5-15 7-17 (35)
20 3snv_A Symfoil-4T/permutation 27.0 32 0.0011 22.5 1.9 15 8-22 103-117 (143)
21 2riv_B Thyroxine-binding globu 26.6 26 0.0009 18.3 1.2 11 5-15 12-22 (40)
22 2xn2_A Alpha-galactosidase; hy 24.7 2.7E+02 0.0093 22.6 7.3 65 5-70 231-319 (732)
23 2h4p_B MENT, heterochromatin-a 22.4 32 0.0011 17.2 1.0 11 5-15 7-17 (34)
24 1egw_A MADS box transcription 20.5 93 0.0032 18.5 3.0 29 40-71 45-73 (77)
25 1wgx_A KIAA1903 protein; MYB D 20.2 58 0.002 19.4 2.0 15 55-69 42-56 (73)
No 1
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*
Probab=99.92 E-value=7.7e-26 Score=189.34 Aligned_cols=79 Identities=16% Similarity=0.297 Sum_probs=72.0
Q ss_pred CCccceeeEEEEEccCCeeeEEEeecCceeEEEccCCceEEEEec-CCccEEEeCCCCCHHHHHHHhhhccCCCCCCCCC
Q 034875 1 MSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKESTIQFIAP-SSYPVITFGPFTSPTAVLVSLSHAVGNLLDQAFS 79 (80)
Q Consensus 1 ~~LY~shPf~l~l~~~G~a~GvffdNt~~~~~d~~~~~~~~f~a~-~~~~~f~~G~gP~p~~Vv~~Yt~ltG~~~mPp~~ 79 (80)
+||||||||||+++++|.+||||+|||++++|++++++.++|+++ +.+++|++ .||+|++|++||++||||++|||+|
T Consensus 213 ~nlYgs~Pfyl~~~~~~~~~Gvf~~Ns~~~dv~~~~~~~~~~~~~gG~lD~y~~-~Gptp~~Vi~qYt~LtG~p~mpP~W 291 (908)
T 3top_A 213 KNSYGVHPYYMGLEEDGSAHGVLLLNSNAMDVTFQPLPALTYRTTGGVLDFYVF-LGPTPELVTQQYTELIGRPVMVPYW 291 (908)
T ss_dssp CCCSCCCCEEEEECSSSCEEEEEECCCSSEEEEEETTTEEEEEESSSCEEEEEE-CCSSHHHHHHHHHHHHCCCCCCCGG
T ss_pred CCccceeeeEEEEcCCCeEEEEEEEcCCCCeEEecCCCeEEEEEcCCcEEEEEe-cCCCHHHHHHHHHHHhCCCCCCChh
Confidence 489999999999988899999999999999999999888999999 55555555 5699999999999999999999999
Q ss_pred C
Q 034875 80 S 80 (80)
Q Consensus 80 ~ 80 (80)
+
T Consensus 292 a 292 (908)
T 3top_A 292 S 292 (908)
T ss_dssp G
T ss_pred h
Confidence 6
No 2
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=99.91 E-value=1.1e-24 Score=181.47 Aligned_cols=79 Identities=16% Similarity=0.272 Sum_probs=70.0
Q ss_pred CCccceeeEEEEEcc-CCeeeEEEeecCceeEEEccCCceEEEEec-CCccEEEeCCCCCHHHHHHHhhhccCCCCCCCC
Q 034875 1 MSLYQSHPWVLAVLP-NGEALGVLADTTRRCEIDLRKESTIQFIAP-SSYPVITFGPFTSPTAVLVSLSHAVGNLLDQAF 78 (80)
Q Consensus 1 ~~LY~shPf~l~l~~-~G~a~GvffdNt~~~~~d~~~~~~~~f~a~-~~~~~f~~G~gP~p~~Vv~~Yt~ltG~~~mPp~ 78 (80)
+||||||||||++++ +|++||||+|||++++|++++.+.++|+++ +.+++|++ .||+|++|++||++||||++|||+
T Consensus 211 ~~lY~~~Pf~~~~~~~~~~~~Gvf~~Ns~~~~v~~~~~~~~~~~~~gg~lD~y~~-~Gptp~~Vv~~Y~~ltG~p~lpP~ 289 (875)
T 3l4y_A 211 TNLYGAQTFFLCLEDASGLSFGVFLMNSNAMEVVLQPAPAITYRTIGGILDFYVF-LGNTPEQVVQEYLELIGRPALPSY 289 (875)
T ss_dssp CCCSCCEEEEEEECSTTCCEEEEEECCCSCEEEEEETTTEEEEEESSSCEEEEEE-EESSHHHHHHHHHHHHCCCCCCCG
T ss_pred CCcccceeEEEEEecCCCcEEEEEEECCCccEEEccCCceEEEEECCCcEEEEEE-eCCCHHHHHHHHHHHhCCCCCCCc
Confidence 489999999999985 699999999999999999998888999999 44443333 449999999999999999999999
Q ss_pred CC
Q 034875 79 SS 80 (80)
Q Consensus 79 ~~ 80 (80)
|+
T Consensus 290 Wa 291 (875)
T 3l4y_A 290 WA 291 (875)
T ss_dssp GG
T ss_pred cc
Confidence 96
No 3
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=99.90 E-value=4.7e-24 Score=177.96 Aligned_cols=79 Identities=15% Similarity=0.253 Sum_probs=69.7
Q ss_pred CCccceeeEEEEEcc-CCeeeEEEeecCceeEEEccCCceEEEEec-CCccEEEeCCCCCHHHHHHHhhhccCCCCCCCC
Q 034875 1 MSLYQSHPWVLAVLP-NGEALGVLADTTRRCEIDLRKESTIQFIAP-SSYPVITFGPFTSPTAVLVSLSHAVGNLLDQAF 78 (80)
Q Consensus 1 ~~LY~shPf~l~l~~-~G~a~GvffdNt~~~~~d~~~~~~~~f~a~-~~~~~f~~G~gP~p~~Vv~~Yt~ltG~~~mPp~ 78 (80)
+|||+||||||++++ +|.+||||+||+++++|++++.+.++|+++ +.+++|++ .||+|++|+++|++||||++|||+
T Consensus 239 ~~lY~~iPf~~~~~~~~~~~~Gvf~~Ns~~~~v~~~~~~~~~~~~~gg~lD~y~~-~Gptp~~Vi~~Y~~LtG~p~lpP~ 317 (898)
T 3lpp_A 239 NNLYGHQTFFMCIEDTSGKSFGVFLMNSNAMEIFIQPTPIVTYRVTGGILDFYIL-LGDTPEQVVQQYQQLVGLPAMPAY 317 (898)
T ss_dssp CCCSCCEEEEEEECSTTCCEEEEEECCCSCEEEEEETTTEEEEEESSSCEEEEEE-EESSHHHHHHHHHHHHCCCCCCCG
T ss_pred CCccccccEEEEEecCCCcEEEEEEeCCCCceEEccCCCeEEEEECCCcEEEEEE-eCCCHHHHHHHHHHHhCCCCcCcc
Confidence 489999999999975 599999999999999999998888999999 44443333 449999999999999999999999
Q ss_pred CC
Q 034875 79 SS 80 (80)
Q Consensus 79 ~~ 80 (80)
|+
T Consensus 318 Wa 319 (898)
T 3lpp_A 318 WN 319 (898)
T ss_dssp GG
T ss_pred hh
Confidence 96
No 4
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=99.87 E-value=2.6e-22 Score=162.48 Aligned_cols=77 Identities=12% Similarity=0.232 Sum_probs=65.5
Q ss_pred CCccceeeEEEEEccCCeeeEEEeecCceeEEEccCC--ceEEEEec-CCccEEEeCCCCCHHHHHHHhhhccCCCCCCC
Q 034875 1 MSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKE--STIQFIAP-SSYPVITFGPFTSPTAVLVSLSHAVGNLLDQA 77 (80)
Q Consensus 1 ~~LY~shPf~l~l~~~G~a~GvffdNt~~~~~d~~~~--~~~~f~a~-~~~~~f~~G~gP~p~~Vv~~Yt~ltG~~~mPp 77 (80)
++||+||||+|.. ++++||||+||+++++||++.+ +.++|+++ +.+++|++ .||+|++|++||++||||++|||
T Consensus 85 ~~lY~~~Pf~~~~--~~~~~Gvf~~n~~~~~~d~~~~~~~~~~~~~~~g~lD~y~~-~G~~p~~v~~~Y~~ltG~~~lpP 161 (666)
T 3nsx_A 85 RSLYGAHNFIIVS--GKTTFGLFFDYPSKLTFDIGYTRMDTLKVSCENADLDIYVI-EGENAYDIVKQFRRVIGRSYIPP 161 (666)
T ss_dssp CCCSEECCEEEEE--SSSCEEEEEECCSCEEEEESSSSTTEEEEEESSCCEEEEEE-ECSSHHHHHHHHHHHHCCCCCCC
T ss_pred hhhhhcceEEEEE--cCcceeEEEecCCcEEEEecccccceEEEEEecCceEEEEE-cCCCHHHHHHHHHHhhCcccCCc
Confidence 4899999999974 5899999999999999999855 35999998 44443333 34999999999999999999999
Q ss_pred CCC
Q 034875 78 FSS 80 (80)
Q Consensus 78 ~~~ 80 (80)
+|+
T Consensus 162 ~wa 164 (666)
T 3nsx_A 162 KFA 164 (666)
T ss_dssp GGG
T ss_pred ccc
Confidence 996
No 5
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=99.85 E-value=1.8e-21 Score=157.79 Aligned_cols=76 Identities=22% Similarity=0.315 Sum_probs=66.9
Q ss_pred CCccceeeEEEEEccCCeeeEEEeecCceeEEEccCCc--eEEEEec-C--CccEEEeCCCCCHHHHHHHhhhccCCCCC
Q 034875 1 MSLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKES--TIQFIAP-S--SYPVITFGPFTSPTAVLVSLSHAVGNLLD 75 (80)
Q Consensus 1 ~~LY~shPf~l~l~~~G~a~GvffdNt~~~~~d~~~~~--~~~f~a~-~--~~~~f~~G~gP~p~~Vv~~Yt~ltG~~~m 75 (80)
.+||++|||+|+++ ++.+||||+||+++++||++.++ .++|+++ + |+|+| .| |+|++|+++|++||||++|
T Consensus 96 ~~lY~~iPf~~~~~-~~~~~Gvf~~n~~~~~~d~~~~~~~~~~~~~~~g~lD~y~~-~G--~~~~~v~~~Y~~ltG~p~~ 171 (693)
T 2g3m_A 96 DPLYVSIPLFISVK-DGVATGYFFNSASKVIFDVGLEEYDKVIVTIPEDSVEFYVI-EG--PRIEDVLEKYTELTGKPFL 171 (693)
T ss_dssp CCCSEECCEEEEEE-TTEEEEEEECCCSCEEEEESSSSTTEEEEEESSSCEEEEEE-EC--SSHHHHHHHHHHHHCCCCC
T ss_pred cccccceeEEEEEc-cCCEEEEEEeCCCceEEEEecccCceEEEEECCCCEEEEEE-eC--CCHHHHHHHHHHHhCCCCC
Confidence 37999999999986 89999999999999999998653 4999998 4 45544 35 9999999999999999999
Q ss_pred CCCCC
Q 034875 76 QAFSS 80 (80)
Q Consensus 76 Pp~~~ 80 (80)
||+|+
T Consensus 172 pP~Wa 176 (693)
T 2g3m_A 172 PPMWA 176 (693)
T ss_dssp CCGGG
T ss_pred Ccccc
Confidence 99995
No 6
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*
Probab=99.83 E-value=9.4e-21 Score=159.79 Aligned_cols=78 Identities=13% Similarity=0.171 Sum_probs=66.3
Q ss_pred CccceeeEEEEEc----cCCeeeEEEeecCceeEEEccCCc-------eEEEEec-C--CccEEEeCCCCCHHHHHHHhh
Q 034875 2 SLYQSHPWVLAVL----PNGEALGVLADTTRRCEIDLRKES-------TIQFIAP-S--SYPVITFGPFTSPTAVLVSLS 67 (80)
Q Consensus 2 ~LY~shPf~l~l~----~~G~a~GvffdNt~~~~~d~~~~~-------~~~f~a~-~--~~~~f~~G~gP~p~~Vv~~Yt 67 (80)
+||+||||+|... +++.+||||+||+++++||++.+. .++|+++ + |+|+|+ |+||+|++||+||+
T Consensus 253 ~lY~siPf~is~~~~g~~~~~~yGvf~dn~~~~~fD~g~~~~~~~~~~~~~~~~~~g~lD~y~~~-g~G~tp~~Vv~~Yt 331 (1027)
T 2x2h_A 253 PMYYAAPWLIVNGCAGTSEQYSYGWFMDNVSQSYMNTGDTTWNSGQEDLAYMGAQYGPFDQHFVY-GAGGGMECVVTAFS 331 (1027)
T ss_dssp CCSEECCEEEEEESTTSTTCEEEEEEECCCSSEEEESSCCGGGCCCTTEEEEEESSCCEEEEEEC-CSSSSHHHHHHHHH
T ss_pred ccccccceEEEeccccCCCCceEEEEEeCCCceEEEccccccccCccceEEEEEecCCccEEEEE-eCCCCHHHHHHHHH
Confidence 5999999999853 247899999999999999999752 3789988 4 555553 67799999999999
Q ss_pred hccCC----------CCCCCCCC
Q 034875 68 HAVGN----------LLDQAFSS 80 (80)
Q Consensus 68 ~ltG~----------~~mPp~~~ 80 (80)
+|||| ++|||+|+
T Consensus 332 ~LTGkp~~~~~ltGrp~lpP~Wa 354 (1027)
T 2x2h_A 332 LLQGKEFENQVLNKRSVMPPKYV 354 (1027)
T ss_dssp HHTCCGGGTCSSCSSSCCCCGGG
T ss_pred HHhCCcccccccccCCCCCCHHH
Confidence 99995 99999996
No 7
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=99.77 E-value=5.1e-19 Score=146.14 Aligned_cols=74 Identities=14% Similarity=0.160 Sum_probs=62.1
Q ss_pred CccceeeEEEEEccCCeeeEEEeecCceeEEEccCCc--eEEEEec-CCccEEEeCCCCCHHHHHHHhhhccCCCCCCCC
Q 034875 2 SLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKES--TIQFIAP-SSYPVITFGPFTSPTAVLVSLSHAVGNLLDQAF 78 (80)
Q Consensus 2 ~LY~shPf~l~l~~~G~a~GvffdNt~~~~~d~~~~~--~~~f~a~-~~~~~f~~G~gP~p~~Vv~~Yt~ltG~~~mPp~ 78 (80)
++|++|||+|+- +.||||+||+.++.||++.+. .++|+++ +.+++|++ .||+|++|+++|++||||++|||+
T Consensus 187 ~~y~~iPf~~s~----~~yGvf~dn~~~~~~d~~~~~~~~~~~~~~gg~ld~y~~-~G~~p~~v~~~Y~~ltG~~~lpP~ 261 (817)
T 4ba0_A 187 QMYFGLPAIMSS----KQYILVFDNSASGAMDIGKTESDILQLEAKSGRSAYILV-AGNSYPSLIENFTQVTGRQPLPPR 261 (817)
T ss_dssp SCSCEEEEEEET----TSEEEEECCCSSEEEEESSSSTTEEEEEESSSCCEEEEE-ECSSHHHHHHHHHHHHCCCCCCCG
T ss_pred cccccccEEEec----CcEEEEEECCCceEEEEEeCCCCEEEEEEcCCcEEEEEe-cCCCHHHHHHHHHHhcCCCCCCCc
Confidence 489999999983 359999999999999998753 4999998 44443333 449999999999999999999999
Q ss_pred CC
Q 034875 79 SS 80 (80)
Q Consensus 79 ~~ 80 (80)
|+
T Consensus 262 Wa 263 (817)
T 4ba0_A 262 WA 263 (817)
T ss_dssp GG
T ss_pred cc
Confidence 95
No 8
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=99.77 E-value=4.9e-19 Score=145.29 Aligned_cols=72 Identities=25% Similarity=0.390 Sum_probs=62.1
Q ss_pred CccceeeEEEEEccCCeeeEEEeecCceeEEEccCCc--eEEEEec-C--CccEEEeCCCCCHHHHHHHhhhccCCCCCC
Q 034875 2 SLYQSHPWVLAVLPNGEALGVLADTTRRCEIDLRKES--TIQFIAP-S--SYPVITFGPFTSPTAVLVSLSHAVGNLLDQ 76 (80)
Q Consensus 2 ~LY~shPf~l~l~~~G~a~GvffdNt~~~~~d~~~~~--~~~f~a~-~--~~~~f~~G~gP~p~~Vv~~Yt~ltG~~~mP 76 (80)
+||++|||+|+- ++||||+||+++++||++.+. .++|+++ + ||||+. | |+|++|+++|++||||++||
T Consensus 192 ~lY~~iPf~~s~----~g~Gvf~~n~~~~~~d~~~~~~~~~~~~~~~~~ldyy~~~-G--~~p~~v~~~Y~~LtG~p~lp 264 (773)
T 2f2h_A 192 QAYKNIPFYMTN----RGYGVLVNHPQCVSFEVGSEKVSKVQFSVESEYLEYFVID-G--PTPKAVLDRYTRFTGRPALP 264 (773)
T ss_dssp CCSEEEEEEEET----TSEEEEECCSSCCEEEESSSBTTEEEEEEESSEEEEEEEE-C--SSHHHHHHHHHHHHCCCCCC
T ss_pred cCcceEEEEEEC----CEEEEEEeCCCceEEEEeeccCceEEEEEecCcEEEEEEe-C--CCHHHHHHHHHHHhcccccC
Confidence 699999999972 579999999999999998764 4888888 4 555442 5 99999999999999999999
Q ss_pred CCCC
Q 034875 77 AFSS 80 (80)
Q Consensus 77 p~~~ 80 (80)
|+|+
T Consensus 265 P~wa 268 (773)
T 2f2h_A 265 PAWS 268 (773)
T ss_dssp CGGG
T ss_pred Cccc
Confidence 9985
No 9
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=99.53 E-value=9.9e-15 Score=123.55 Aligned_cols=38 Identities=8% Similarity=0.182 Sum_probs=31.3
Q ss_pred EEEEec--C--CccEEEeCCCCCHHHHHHHhhhccCCCCCCCCCC
Q 034875 40 IQFIAP--S--SYPVITFGPFTSPTAVLVSLSHAVGNLLDQAFSS 80 (80)
Q Consensus 40 ~~f~a~--~--~~~~f~~G~gP~p~~Vv~~Yt~ltG~~~mPp~~~ 80 (80)
++|+++ + ||||+ .| |+|++|+++|++||||++|||+|+
T Consensus 393 ~~~~s~~gg~lDyy~~-~G--~tp~~Vv~~Yt~LTGrp~mpP~Wa 434 (1020)
T 2xvl_A 393 LSLASETGKAIDYYFV-AG--DTKDDIISGYRQLTGKSVMLPKWA 434 (1020)
T ss_dssp EEEEEEEESSEEEEEE-EC--SSHHHHHHHHHHHHCCCCCCCGGG
T ss_pred EEEEEccCCCEEEEEE-eC--CCHHHHHHHHHHHhCCCCCCCcce
Confidence 777765 3 55544 36 999999999999999999999995
No 10
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=98.32 E-value=9.9e-07 Score=70.43 Aligned_cols=67 Identities=13% Similarity=0.075 Sum_probs=52.2
Q ss_pred EEEEEccCCeeeEEEeecCceeEEEccCCce-EEEEecC---------CccEEEeCCCCCHHHHHHHhhhccCCCCCCCC
Q 034875 9 WVLAVLPNGEALGVLADTTRRCEIDLRKEST-IQFIAPS---------SYPVITFGPFTSPTAVLVSLSHAVGNLLDQAF 78 (80)
Q Consensus 9 f~l~l~~~G~a~GvffdNt~~~~~d~~~~~~-~~f~a~~---------~~~~f~~G~gP~p~~Vv~~Yt~ltG~~~mPp~ 78 (80)
++++. ++..+|++.+|++++.|+++.... +++.+.+ +..+++.| ++|++|+++|+++||+++ ||.
T Consensus 116 ~~~~~--~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g--~~~~~v~~~y~~l~g~~~-~p~ 190 (564)
T 1zy9_A 116 YFVAE--EGKVYGFLSSKIAHPFFAVEDGELVAYLEYFDVEFDDFVPLEPLVVLED--PNTPLLLEKYAELVGMEN-NAR 190 (564)
T ss_dssp SEEEE--TTEEEEESCCSSSEEEEEEETTEEEEEEECTTCCEEEEEECCCEEEEEC--SCHHHHHHHHHHHHHHHT-TCC
T ss_pred ceecC--CceEEEEEecCCccceEEEecCcEEEEEecCCccccceeecceEEEEeC--CCHHHHHHHHHHHhcccC-CCc
Confidence 34553 599999999999999999984432 5555544 55554446 999999999999999999 888
Q ss_pred CC
Q 034875 79 SS 80 (80)
Q Consensus 79 ~~ 80 (80)
|+
T Consensus 191 w~ 192 (564)
T 1zy9_A 191 VP 192 (564)
T ss_dssp CC
T ss_pred cc
Confidence 73
No 11
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=76.54 E-value=6.8 Score=31.96 Aligned_cols=72 Identities=14% Similarity=0.206 Sum_probs=42.6
Q ss_pred ceeeEEEEEccC-----CeeeEEEeecCc--eeEEEccCCc--eEEEEec----------CC-----ccEEEeCCCCCHH
Q 034875 5 QSHPWVLAVLPN-----GEALGVLADTTR--RCEIDLRKES--TIQFIAP----------SS-----YPVITFGPFTSPT 60 (80)
Q Consensus 5 ~shPf~l~l~~~-----G~a~GvffdNt~--~~~~d~~~~~--~~~f~a~----------~~-----~~~f~~G~gP~p~ 60 (80)
+.+||++-.+++ |.+||+.+..|- +.++...... .+.+... ++ -.+++++ .....
T Consensus 227 ~~~P~~~l~~~~~~e~~G~~~g~~l~~sG~~~~~~~~~~~~~~~v~~g~~~~~~~~~L~pGe~~~tp~~~~~~~-~~gl~ 305 (720)
T 2yfo_A 227 QYNPAVILAEKGTTETAGSCYGMLFVYSGNFSCEAEKDQFNQTRLLLGLNEELFSYPLASGETFTVPEVILSYS-AEGLS 305 (720)
T ss_dssp SBCSEEEEEETTCCSSSBCEEEEEECCSSCEEEEEEECTTSCEEEEEESCSTTCCEEECTTCEEEEEEEEEEEE-SBCHH
T ss_pred cCCcEEEEecCCCCcccceEEEEEEecCCcEEEEEEEcCCCeEEEEEeecCcCcceEeCCCCeEEeeEEEEEEe-cCCHH
Confidence 468999865543 889999998664 3444433221 2333321 11 1223332 25789
Q ss_pred HHHHHhhhccCCCCCCC
Q 034875 61 AVLVSLSHAVGNLLDQA 77 (80)
Q Consensus 61 ~Vv~~Yt~ltG~~~mPp 77 (80)
++.++|+.++++..+|+
T Consensus 306 ~~~~~~~~~~r~~~~~~ 322 (720)
T 2yfo_A 306 ALSQQYHNCIRNHVCRS 322 (720)
T ss_dssp HHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhhcccc
Confidence 99999999988765543
No 12
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=40.70 E-value=18 Score=22.47 Aligned_cols=25 Identities=12% Similarity=0.070 Sum_probs=18.9
Q ss_pred CCCCHHHHHHHhhhc--------cCCCCCCCCC
Q 034875 55 PFTSPTAVLVSLSHA--------VGNLLDQAFS 79 (80)
Q Consensus 55 ~gP~p~~Vv~~Yt~l--------tG~~~mPp~~ 79 (80)
||-|.++|.++|..| .|+.|+|-|.
T Consensus 42 pGRT~~q~k~ry~~l~~dv~~iesg~vp~P~y~ 74 (93)
T 2cjj_A 42 EGRTPEEVKKHYEILVEDIKYIESGKVPFPNYR 74 (93)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Confidence 579999999999998 5889988663
No 13
>4gow_A Potassium voltage-gated channel subfamily KQT MEM; protein complex, protein binding, ION channel, calmodulin, P channel; 2.60A {Homo sapiens}
Probab=38.09 E-value=6.7 Score=24.03 Aligned_cols=11 Identities=18% Similarity=0.135 Sum_probs=0.0
Q ss_pred CHHHHHHHhhh
Q 034875 58 SPTAVLVSLSH 68 (80)
Q Consensus 58 ~p~~Vv~~Yt~ 68 (80)
+.+||||||+.
T Consensus 36 DVkDVIEQYSa 46 (72)
T 4gow_A 36 DVKDVIEQYSA 46 (72)
T ss_dssp -----------
T ss_pred cHHHHHHHHhh
Confidence 46899999974
No 14
>1k4u_P Phagocyte NADPH oxidase subunit P47PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens}
Probab=36.41 E-value=12 Score=19.68 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=15.4
Q ss_pred CCCCHHHHHHHhhhccCC
Q 034875 55 PFTSPTAVLVSLSHAVGN 72 (80)
Q Consensus 55 ~gP~p~~Vv~~Yt~ltG~ 72 (80)
|+|+++.++++-++.|-|
T Consensus 9 pRPs~~lIl~RCs~~T~r 26 (32)
T 1k4u_P 9 PRPSADLILNRCSESTKR 26 (32)
T ss_dssp CCCCHHHHHHSSCHHHHH
T ss_pred CCCCHHHHHHHccHHHHh
Confidence 789999999998887743
No 15
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=35.82 E-value=19 Score=22.93 Aligned_cols=52 Identities=13% Similarity=0.238 Sum_probs=33.3
Q ss_pred eeeEEEeec-------CceeEEEccCCceEEEEecCCccEEEeCCCCCHHHHHHHhhhccCCC
Q 034875 18 EALGVLADT-------TRRCEIDLRKESTIQFIAPSSYPVITFGPFTSPTAVLVSLSHAVGNL 73 (80)
Q Consensus 18 ~a~GvffdN-------t~~~~~d~~~~~~~~f~a~~~~~~f~~G~gP~p~~Vv~~Yt~ltG~~ 73 (80)
++|||+..+ +.|+.|.+.++-.+.+.-.++.. . ..|+..++++...+|.|.+
T Consensus 104 ~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~---~-~~~~~~eil~~l~~l~~e~ 162 (164)
T 4gqc_A 104 KLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNP---L-NEPDYDEVVREANKIAGEL 162 (164)
T ss_dssp HHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCT---T-CCCCHHHHHHHHHHHHHHC
T ss_pred HHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCC---C-CCCCHHHHHHHHHHHhccc
Confidence 467776433 34566777666666665443322 1 3478999999998888754
No 16
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=35.73 E-value=26 Score=20.61 Aligned_cols=22 Identities=18% Similarity=0.065 Sum_probs=18.4
Q ss_pred CCHHHHHHHhhhcc-------CCCCCCCC
Q 034875 57 TSPTAVLVSLSHAV-------GNLLDQAF 78 (80)
Q Consensus 57 P~p~~Vv~~Yt~lt-------G~~~mPp~ 78 (80)
-|.++|.++|..|. |+.++|-+
T Consensus 43 Rt~~eV~~~y~~L~~d~~~~~G~vp~P~~ 71 (72)
T 2cqq_A 43 RSVTDVTTKAKQLKDSVTCSPGMVSGPSS 71 (72)
T ss_dssp SCHHHHHHHHHHHHHSCCCCSCCCSCSCC
T ss_pred CCHHHHHHHHHHHHHhcCccCCCCCCCCC
Confidence 89999999998764 88888854
No 17
>1ym0_B Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=33.83 E-value=6.7 Score=19.67 Aligned_cols=14 Identities=14% Similarity=0.207 Sum_probs=10.2
Q ss_pred HHHhhhccCCCCCCC
Q 034875 63 LVSLSHAVGNLLDQA 77 (80)
Q Consensus 63 v~~Yt~ltG~~~mPp 77 (80)
|.||++ .|.|.|||
T Consensus 13 vsqysd-agdmelpp 26 (27)
T 1ym0_B 13 VSQYSD-AGDMELPP 26 (27)
T ss_dssp CCSSTT-TTCCCCCC
T ss_pred ceeccc-ccccccCC
Confidence 456766 48899988
No 18
>1hle_B Horse leukocyte elastase inhibitor; hydrolase inhibitor(serine proteinase); 1.95A {Equus caballus} SCOP: e.1.1.1
Probab=30.28 E-value=19 Score=17.69 Aligned_cols=11 Identities=18% Similarity=0.609 Sum_probs=8.6
Q ss_pred ceeeEEEEEcc
Q 034875 5 QSHPWVLAVLP 15 (80)
Q Consensus 5 ~shPf~l~l~~ 15 (80)
-.|||+..+++
T Consensus 6 ~drPFlf~I~~ 16 (31)
T 1hle_B 6 ADHPFIFFIRH 16 (31)
T ss_dssp CCSCEEEEEEE
T ss_pred EeCCEEEEEEE
Confidence 36899999873
No 19
>2xn6_B Thyroxine-binding globulin; transport, cleaved protein; HET: F6Y T44; 1.29A {Homo sapiens} PDB: 2xn5_B* 2xn7_B*
Probab=28.07 E-value=24 Score=17.85 Aligned_cols=11 Identities=18% Similarity=0.431 Sum_probs=8.7
Q ss_pred ceeeEEEEEcc
Q 034875 5 QSHPWVLAVLP 15 (80)
Q Consensus 5 ~shPf~l~l~~ 15 (80)
-.|||+..+++
T Consensus 7 ~drPFlf~I~~ 17 (35)
T 2xn6_B 7 IDRSFMLLILE 17 (35)
T ss_dssp CCBCEEEEEEE
T ss_pred ecCCEEEEEEE
Confidence 36899999973
No 20
>3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens}
Probab=27.04 E-value=32 Score=22.48 Aligned_cols=15 Identities=27% Similarity=0.381 Sum_probs=13.3
Q ss_pred eEEEEEccCCeeeEE
Q 034875 8 PWVLAVLPNGEALGV 22 (80)
Q Consensus 8 Pf~l~l~~~G~a~Gv 22 (80)
-||++|.++|+.+|-
T Consensus 103 g~Ylamnk~Grl~Gs 117 (143)
T 3snv_A 103 GQYLRINPDGTVDGT 117 (143)
T ss_dssp CCEEEECTTSBEEEE
T ss_pred CEEEEEcCCCcCcCc
Confidence 499999999999984
No 21
>2riv_B Thyroxine-binding globulin; TBG, serpin, cleaved, mutation, glycoprotein, secreted, signaling protein; 1.50A {Homo sapiens} PDB: 2riw_B* 2xn3_B*
Probab=26.61 E-value=26 Score=18.28 Aligned_cols=11 Identities=18% Similarity=0.431 Sum_probs=8.7
Q ss_pred ceeeEEEEEcc
Q 034875 5 QSHPWVLAVLP 15 (80)
Q Consensus 5 ~shPf~l~l~~ 15 (80)
-.|||++.+++
T Consensus 12 ~drPFlf~I~~ 22 (40)
T 2riv_B 12 IDRSFMLLILE 22 (40)
T ss_dssp CCBCEEEEEEE
T ss_pred ecCCEEEEEEe
Confidence 36999999973
No 22
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=24.73 E-value=2.7e+02 Score=22.56 Aligned_cols=65 Identities=12% Similarity=0.181 Sum_probs=37.2
Q ss_pred ceeeEEEEEccC-----CeeeEEEeecC--ceeEEEccCCc--eEEEEec----------C-----CccEEEeCCCCCHH
Q 034875 5 QSHPWVLAVLPN-----GEALGVLADTT--RRCEIDLRKES--TIQFIAP----------S-----SYPVITFGPFTSPT 60 (80)
Q Consensus 5 ~shPf~l~l~~~-----G~a~GvffdNt--~~~~~d~~~~~--~~~f~a~----------~-----~~~~f~~G~gP~p~ 60 (80)
+.+||++-.+++ |.+||+.+..| ++.++...... .+.+... + .-.+++++ .....
T Consensus 231 ~~~P~~~l~~~~~~e~~G~~~g~~l~~sG~~~~~~~~~~~~~~~v~~g~~~~~~~~~L~pGe~~~tP~~~~~~s-~~g~~ 309 (732)
T 2xn2_A 231 QMNPFMALVDHDTNEFXGEAYGFALAYSGNHKFEVERDQFGQIHVNTGINDYNFKWKLNPNEEFQTPEVLMVYS-DQGLN 309 (732)
T ss_dssp SBCSEEEEECTTCCSSSBCEEEEEECCSSCEEEEEEECTTSCEEEEEEECCTTCCEEECTTCEEECCCEEEEEE-SBCHH
T ss_pred cCCcEEEEecCCCCcccceEEEEEEecCCcEEEEEEEcCCCeEEEEEEEcCCCCceEecCCCeEEeeEEEEEEe-cCCHH
Confidence 568999865543 78999998755 34444433321 2443331 1 12334443 24677
Q ss_pred HHHHHhhhcc
Q 034875 61 AVLVSLSHAV 70 (80)
Q Consensus 61 ~Vv~~Yt~lt 70 (80)
++.++|+.++
T Consensus 310 ~~s~~~~~l~ 319 (732)
T 2xn2_A 310 KMSQAFHSLI 319 (732)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888888876
No 23
>2h4p_B MENT, heterochromatin-associated protein MENT; serine protease inhibitor, serpin, hydrolase inhibitor; 1.70A {Gallus gallus} PDB: 2h4q_B
Probab=22.36 E-value=32 Score=17.16 Aligned_cols=11 Identities=18% Similarity=0.416 Sum_probs=8.5
Q ss_pred ceeeEEEEEcc
Q 034875 5 QSHPWVLAVLP 15 (80)
Q Consensus 5 ~shPf~l~l~~ 15 (80)
-.|||+..+++
T Consensus 7 ~drPFlf~I~~ 17 (34)
T 2h4p_B 7 VDHPFHFFIRH 17 (34)
T ss_dssp CCSCEEEEEEE
T ss_pred ecCCEEEEEEE
Confidence 35899999873
No 24
>1egw_A MADS box transcription enhancer factor 2, polypeptide A; MADS-box transcription factor, DNA/protein complex, transcription/DNA; HET: DNA; 1.50A {Homo sapiens} SCOP: d.88.1.1 PDB: 1c7u_A 3mu6_A*
Probab=20.54 E-value=93 Score=18.55 Aligned_cols=29 Identities=17% Similarity=0.117 Sum_probs=20.2
Q ss_pred EEEEecCCccEEEeCCCCCHHHHHHHhhhccC
Q 034875 40 IQFIAPSSYPVITFGPFTSPTAVLVSLSHAVG 71 (80)
Q Consensus 40 ~~f~a~~~~~~f~~G~gP~p~~Vv~~Yt~ltG 71 (80)
+-|...+.++-|- . ++.++|+++|.+...
T Consensus 45 ivfs~~gk~~~~~-s--~~~~~il~ry~~~~~ 73 (77)
T 1egw_A 45 IIFNSSNKLFQYA-S--TDMDKVLLKYTEYNE 73 (77)
T ss_dssp EEECTTCCEEEEE-S--SCHHHHHHHHHHC--
T ss_pred EEECCCCCEeeCC-C--CCHHHHHHHHHhccC
Confidence 4455556666564 4 899999999998764
No 25
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=20.24 E-value=58 Score=19.42 Aligned_cols=15 Identities=13% Similarity=0.009 Sum_probs=13.6
Q ss_pred CCCCHHHHHHHhhhc
Q 034875 55 PFTSPTAVLVSLSHA 69 (80)
Q Consensus 55 ~gP~p~~Vv~~Yt~l 69 (80)
+|-|.++|+++|.+|
T Consensus 42 ~gKT~eE~~~hY~~l 56 (73)
T 1wgx_A 42 GSRSPEECQRKYMEN 56 (73)
T ss_dssp TTSCHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHH
Confidence 569999999999988
Done!