BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034890
(80 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|282848218|gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
[Jatropha curcas]
Length = 80
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/80 (93%), Positives = 80/80 (100%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLV+DNTVEVNG+EKNDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKNDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVVTVEALEPV+K+Q
Sbjct: 61 VIRGNSVVTVEALEPVNKTQ 80
>gi|225440849|ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
vinifera]
gi|297740131|emb|CBI30313.3| unnamed protein product [Vitis vinifera]
Length = 80
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/80 (93%), Positives = 78/80 (97%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLV+DNTVEVNGNEK DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVVTVEALEPVS+ Q
Sbjct: 61 VIRGNSVVTVEALEPVSRMQ 80
>gi|357511115|ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
gi|87240819|gb|ABD32677.1| Like-Sm ribonucleoprotein-related, core [Medicago truncatula]
gi|355500861|gb|AES82064.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
Length = 80
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/79 (94%), Positives = 79/79 (100%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDK+LQIKLNANRMIVGTLRGFDQFMNLV+DNTVEVNGNEKNDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKS 79
VIRGNSVVTVEALEPV++S
Sbjct: 61 VIRGNSVVTVEALEPVNRS 79
>gi|356505386|ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine
max]
gi|356572580|ref|XP_003554446.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Glycine max]
gi|255625815|gb|ACU13252.1| unknown [Glycine max]
Length = 79
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLV+DNTVEVNGNEKNDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKS 79
VIRGNSVVTVEALEPV+++
Sbjct: 61 VIRGNSVVTVEALEPVNRT 79
>gi|242050850|ref|XP_002463169.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
gi|241926546|gb|EER99690.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
Length = 80
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/80 (91%), Positives = 79/80 (98%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANR+++GTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVV +EALEPV+K+Q
Sbjct: 61 VIRGNSVVMIEALEPVAKAQ 80
>gi|224088536|ref|XP_002308466.1| predicted protein [Populus trichocarpa]
gi|222854442|gb|EEE91989.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/80 (91%), Positives = 79/80 (98%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLV+DNTVEVNG+EK DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVVTVEALEPV+++Q
Sbjct: 61 VIRGNSVVTVEALEPVNRAQ 80
>gi|356538387|ref|XP_003537685.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine
max]
gi|255630063|gb|ACU15385.1| unknown [Glycine max]
Length = 79
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/79 (93%), Positives = 78/79 (98%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLN NRMIVGTLRGFDQFMNLV+DNTVEVNGNEKNDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNGNRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKS 79
VIRGNSVVTVEALEPV+++
Sbjct: 61 VIRGNSVVTVEALEPVNRA 79
>gi|224138462|ref|XP_002322820.1| predicted protein [Populus trichocarpa]
gi|222867450|gb|EEF04581.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/80 (90%), Positives = 79/80 (98%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLV+DNTV+VNG+EK DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVDVNGDEKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVVTVEALEPV+++Q
Sbjct: 61 VIRGNSVVTVEALEPVTRTQ 80
>gi|118483312|gb|ABK93558.1| unknown [Populus trichocarpa]
Length = 80
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/80 (90%), Positives = 79/80 (98%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLV+DNTVEVNG+EK DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
V+RGNSVVTVEALEPV+++Q
Sbjct: 61 VLRGNSVVTVEALEPVNRAQ 80
>gi|388492630|gb|AFK34381.1| unknown [Lotus japonicus]
Length = 80
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDK LQIKLNANRMIVGTLRG+DQFMN+V+DNTVEVNGNEKNDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKNLQIKLNANRMIVGTLRGYDQFMNMVVDNTVEVNGNEKNDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKS 79
VIRGNSVVTVEALEPV+++
Sbjct: 61 VIRGNSVVTVEALEPVTRT 79
>gi|255578959|ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
gi|223530136|gb|EEF32048.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
Length = 80
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/80 (91%), Positives = 78/80 (97%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLV+DNTVEVNG+EK DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVVTVEALEPV++ Q
Sbjct: 61 VIRGNSVVTVEALEPVNRMQ 80
>gi|388514393|gb|AFK45258.1| unknown [Medicago truncatula]
Length = 81
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/76 (97%), Positives = 76/76 (100%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDK+LQIKLNANRMIVGTLRGFDQFMNLV+DNTVEVNGNEKNDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60
Query: 61 VIRGNSVVTVEALEPV 76
VIRGNSVVTVEALEPV
Sbjct: 61 VIRGNSVVTVEALEPV 76
>gi|449451158|ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Cucumis sativus]
gi|449482341|ref|XP_004156252.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Cucumis sativus]
Length = 80
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/80 (90%), Positives = 78/80 (97%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANR+++GTLRGFDQFMNLV+DNTVEVNGNEK DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRLVIGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVVTVEALEPV++ Q
Sbjct: 61 VIRGNSVVTVEALEPVNRMQ 80
>gi|194694128|gb|ACF81148.1| unknown [Zea mays]
gi|195637264|gb|ACG38100.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195645546|gb|ACG42241.1| small nuclear ribonucleoprotein G [Zea mays]
gi|413955444|gb|AFW88093.1| Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/80 (90%), Positives = 78/80 (97%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANR+++GTLRGFDQFMNLVIDNTVEVNGN+K DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVEVNGNDKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVV +EALEPV+KSQ
Sbjct: 61 VIRGNSVVMIEALEPVAKSQ 80
>gi|34394185|dbj|BAC84637.1| putative small nuclear ribonucleoprotein E [Oryza sativa Japonica
Group]
gi|215769180|dbj|BAH01409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199999|gb|EEC82426.1| hypothetical protein OsI_26821 [Oryza sativa Indica Group]
gi|222637431|gb|EEE67563.1| hypothetical protein OsJ_25073 [Oryza sativa Japonica Group]
Length = 80
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/80 (90%), Positives = 77/80 (96%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANR+++GTLRGFDQFMNLV+DNTVEVNGNEKNDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVV +EALEPV K Q
Sbjct: 61 VIRGNSVVMIEALEPVPKPQ 80
>gi|242040617|ref|XP_002467703.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
gi|241921557|gb|EER94701.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
Length = 81
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/80 (88%), Positives = 78/80 (97%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANR+++GTLRGFDQFMNLV+DNTVEVNGN+K DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVV +EALEPV+KSQ
Sbjct: 61 VIRGNSVVMIEALEPVAKSQ 80
>gi|147806402|emb|CAN67622.1| hypothetical protein VITISV_014712 [Vitis vinifera]
Length = 148
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/77 (93%), Positives = 74/77 (96%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLV+DNTVEVNGNEK DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVS 77
VIRGNSVVTVEALEP
Sbjct: 61 VIRGNSVVTVEALEPAC 77
>gi|388493710|gb|AFK34921.1| unknown [Medicago truncatula]
Length = 81
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/76 (96%), Positives = 76/76 (100%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDL+KYMDK+LQIKLNANRMIVGTLRGFDQFMNLV+DNTVEVNGNEKNDIGMV
Sbjct: 1 MSRSGQPPDLEKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60
Query: 61 VIRGNSVVTVEALEPV 76
VIRGNSVVTVEALEPV
Sbjct: 61 VIRGNSVVTVEALEPV 76
>gi|357159383|ref|XP_003578429.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
isoform 1 [Brachypodium distachyon]
gi|357159386|ref|XP_003578430.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
isoform 2 [Brachypodium distachyon]
Length = 81
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 78/80 (97%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIK+NANR+++GTLRGFDQFMNLV+DNTVEVNGNEK DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
V+RGNSVV +EALEP++KSQ
Sbjct: 61 VVRGNSVVMIEALEPIAKSQ 80
>gi|15224075|ref|NP_179971.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|297821653|ref|XP_002878709.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|6094211|sp|O82221.1|RUXG_ARATH RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|3738322|gb|AAC63663.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|21593829|gb|AAM65796.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|25083131|gb|AAN72046.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|30102776|gb|AAP21306.1| At2g23930 [Arabidopsis thaliana]
gi|297324548|gb|EFH54968.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|330252409|gb|AEC07503.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 80
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/79 (89%), Positives = 76/79 (96%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANRM+ GTLRGFDQFMNLV+DNTVEVNGN+K DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKS 79
VIRGNS+VTVEALEPV +S
Sbjct: 61 VIRGNSIVTVEALEPVGRS 79
>gi|357122008|ref|XP_003562708.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Brachypodium distachyon]
Length = 80
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 79/80 (98%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANR+++GTLRGFDQFMNLV+DNTVEVNGN++NDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDRNDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
V+RGNSVV +EALEP++KSQ
Sbjct: 61 VLRGNSVVMIEALEPIAKSQ 80
>gi|15229773|ref|NP_187757.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
gi|297833932|ref|XP_002884848.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|12322914|gb|AAG51452.1|AC008153_25 putative small nuclear ribonucleoprotein polypeptide G;
65009-64161 [Arabidopsis thaliana]
gi|17065484|gb|AAL32896.1| putative small nuclear ribonucleoprotein polypeptide G
[Arabidopsis thaliana]
gi|24899751|gb|AAN65090.1| putative small nuclear ribonucleoprotein polypeptide G
[Arabidopsis thaliana]
gi|297330688|gb|EFH61107.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|332641534|gb|AEE75055.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
Length = 79
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/79 (89%), Positives = 77/79 (97%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANRM+VGTLRGFDQFMNLV+DNTVEVNG++K DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDDKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKS 79
VIRGNS+VTVEALEPV +S
Sbjct: 61 VIRGNSIVTVEALEPVGRS 79
>gi|115453489|ref|NP_001050345.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|37991869|gb|AAR06315.1| putative small nuclear ribonucleoprotein polypeptide G [Oryza
sativa Japonica Group]
gi|108708766|gb|ABF96561.1| small nuclear ribonucleoprotein G, putative, expressed [Oryza
sativa Japonica Group]
gi|113548816|dbj|BAF12259.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|125544286|gb|EAY90425.1| hypothetical protein OsI_12008 [Oryza sativa Indica Group]
gi|125586635|gb|EAZ27299.1| hypothetical protein OsJ_11235 [Oryza sativa Japonica Group]
gi|215769229|dbj|BAH01458.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 80
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/80 (90%), Positives = 77/80 (96%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANR+IVGTLRGFDQFMNLV+DNTVEVNGN+K DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
V+RGNSVV +EALEPV KSQ
Sbjct: 61 VVRGNSVVMIEALEPVPKSQ 80
>gi|226509589|ref|NP_001148720.1| small nuclear ribonucleoprotein G [Zea mays]
gi|194698570|gb|ACF83369.1| unknown [Zea mays]
gi|195609740|gb|ACG26700.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195621638|gb|ACG32649.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195656303|gb|ACG47619.1| small nuclear ribonucleoprotein G [Zea mays]
gi|414867200|tpg|DAA45757.1| TPA: Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 78/80 (97%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIK+NANR+++GTLRGFDQFMNLV+DNTVEVNGN+K DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVV +EALEPV++SQ
Sbjct: 61 VIRGNSVVMIEALEPVARSQ 80
>gi|326517334|dbj|BAK00034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 80
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 78/80 (97%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANR+++GTLRGFDQFMNLV+DNTVEVNG+EK DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
V+RGNSVV +EALEP+++SQ
Sbjct: 61 VLRGNSVVMIEALEPIARSQ 80
>gi|195606768|gb|ACG25214.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 77/80 (96%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIK+NANR+++GTLRGFDQFMNLV+DN VEVNGN+K DIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNIVEVNGNDKTDIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVV +EALEPV++SQ
Sbjct: 61 VIRGNSVVMIEALEPVARSQ 80
>gi|116780179|gb|ABK21578.1| unknown [Picea sitchensis]
gi|116780948|gb|ABK21894.1| unknown [Picea sitchensis]
Length = 80
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/79 (86%), Positives = 76/79 (96%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKL IKLNANR++VGTLRGFDQFMNLV+D TVEVNGNE+N+IGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLNIKLNANRVVVGTLRGFDQFMNLVLDGTVEVNGNERNEIGMV 60
Query: 61 VIRGNSVVTVEALEPVSKS 79
VIRGNSVV +EALEPV++S
Sbjct: 61 VIRGNSVVMIEALEPVNRS 79
>gi|134126|sp|P24715.1|RUXG_MEDSA RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|19573|emb|CAA44975.1| snRNP-related protein [Medicago sativa]
Length = 81
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/76 (92%), Positives = 72/76 (94%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MS SGQPP LKKYMDK+LQI L ANRMIVGTLRGFDQFMNLV+DNTVEVNGNEKNDIGMV
Sbjct: 1 MSTSGQPPALKKYMDKQLQINLKANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60
Query: 61 VIRGNSVVTVEALEPV 76
VIRGNSVVTVEALEPV
Sbjct: 61 VIRGNSVVTVEALEPV 76
>gi|14192871|gb|AAK55776.1|AC079038_10 Putative small nuclear ribonucleoprotein G [Oryza sativa]
Length = 94
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/94 (75%), Positives = 77/94 (81%), Gaps = 14/94 (14%)
Query: 1 MSRSGQPPDLKKYMDKKLQ--------------IKLNANRMIVGTLRGFDQFMNLVIDNT 46
MSRSGQPPDLKKYMDKKLQ +KLNANR+++GTLRGFDQFMNLV+DNT
Sbjct: 1 MSRSGQPPDLKKYMDKKLQTLMVYSFTLFSILPVKLNANRVVIGTLRGFDQFMNLVVDNT 60
Query: 47 VEVNGNEKNDIGMVVIRGNSVVTVEALEPVSKSQ 80
VEVNGNEKNDIGMVVIRGNSVV +EALEPV K Q
Sbjct: 61 VEVNGNEKNDIGMVVIRGNSVVMIEALEPVPKPQ 94
>gi|302768987|ref|XP_002967913.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
gi|300164651|gb|EFJ31260.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
Length = 81
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 71/77 (92%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MS+SGQPPDLKKYMD KL IKLNANR++VG LRGFDQFMNLV+DNT+E++GNE+ +IGMV
Sbjct: 1 MSKSGQPPDLKKYMDLKLMIKLNANRVVVGVLRGFDQFMNLVLDNTMEISGNERTEIGMV 60
Query: 61 VIRGNSVVTVEALEPVS 77
VIRGNSV +EALEPV+
Sbjct: 61 VIRGNSVAMIEALEPVA 77
>gi|168067143|ref|XP_001785484.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662891|gb|EDQ49691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 77
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/76 (80%), Positives = 69/76 (90%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MS+SGQPPDLKKYMDKKL IKLNA R +VG LRGFDQFMNLV+DNTVE+NG ++N+IGMV
Sbjct: 1 MSKSGQPPDLKKYMDKKLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVEINGADRNEIGMV 60
Query: 61 VIRGNSVVTVEALEPV 76
VIRGNSVV +EALE V
Sbjct: 61 VIRGNSVVMIEALEAV 76
>gi|47026939|gb|AAT08690.1| small nuclear ribonucleoprotein polypeptide G [Hyacinthus
orientalis]
Length = 96
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/80 (77%), Positives = 73/80 (91%), Gaps = 1/80 (1%)
Query: 2 SRSGQPPDLKK-YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
+ SGQPP LK+ + KLQIKLNANR++VGTLRGFDQFMNLVIDNT+EVNGN+KNDIGMV
Sbjct: 17 AASGQPPALKQVHGTSKLQIKLNANRVVVGTLRGFDQFMNLVIDNTMEVNGNDKNDIGMV 76
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
VIRGNSVV +EALEPV+++Q
Sbjct: 77 VIRGNSVVMIEALEPVARTQ 96
>gi|168049678|ref|XP_001777289.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671391|gb|EDQ57944.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 76
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 68/76 (89%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MS+SGQPPDLKKYMD+KL IKLNA R +VG LRGFDQFMNLV+DNTVEV G EKN+IGMV
Sbjct: 1 MSKSGQPPDLKKYMDRKLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVEVQGAEKNEIGMV 60
Query: 61 VIRGNSVVTVEALEPV 76
VIRGNSVV +EALE V
Sbjct: 61 VIRGNSVVMIEALEVV 76
>gi|145329599|ref|NP_001077949.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|330252410|gb|AEC07504.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 67
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEAL 73
MDKKLQIKLNANRM+ GTLRGFDQFMNLV+DNTVEVNGN+K DIGMVVIRGNS+VTVEAL
Sbjct: 1 MDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSIVTVEAL 60
Query: 74 EPVSKSQ 80
EPV +S
Sbjct: 61 EPVGRSS 67
>gi|115473291|ref|NP_001060244.1| Os07g0608700 [Oryza sativa Japonica Group]
gi|113611780|dbj|BAF22158.1| Os07g0608700 [Oryza sativa Japonica Group]
Length = 67
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 60/60 (100%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MSRSGQPPDLKKYMDKKLQIKLNANR+++GTLRGFDQFMNLV+DNTVEVNGNEKNDIGMV
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60
>gi|414867201|tpg|DAA45758.1| TPA: small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 65/67 (97%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEAL 73
MDKKLQIK+NANR+++GTLRGFDQFMNLV+DNTVEVNGN+K DIGMVVIRGNSVV +EAL
Sbjct: 1 MDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMIEAL 60
Query: 74 EPVSKSQ 80
EPV++SQ
Sbjct: 61 EPVARSQ 67
>gi|195657879|gb|ACG48407.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/67 (82%), Positives = 64/67 (95%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEAL 73
MDKKLQIK+NANR+++GTLRGFDQFMNLV+DN VEVNGN+K DIGMVVIRGNSVV +EAL
Sbjct: 1 MDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNIVEVNGNDKTDIGMVVIRGNSVVMIEAL 60
Query: 74 EPVSKSQ 80
EPV++SQ
Sbjct: 61 EPVARSQ 67
>gi|440583672|emb|CCH47178.1| similar to small nuclear ribonucleoprotein G-like [Lupinus
angustifolius]
Length = 88
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/72 (79%), Positives = 62/72 (86%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSV 67
PD + IKLNANRMIVGTLRGFDQFMNLV+DNTVEVNGNEK DIGMVVIRGNSV
Sbjct: 17 PDTVQLDHYLYTIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMVVIRGNSV 76
Query: 68 VTVEALEPVSKS 79
VTVEALEPV+++
Sbjct: 77 VTVEALEPVNRT 88
>gi|219884693|gb|ACL52721.1| unknown [Zea mays]
gi|413955445|gb|AFW88094.1| hypothetical protein ZEAMMB73_159101 [Zea mays]
Length = 74
Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 59/62 (95%)
Query: 19 QIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVSK 78
+KLNANR+++GTLRGFDQFMNLVIDNTVEVNGN+K DIGMVVIRGNSVV +EALEPV+K
Sbjct: 13 SVKLNANRVVIGTLRGFDQFMNLVIDNTVEVNGNDKTDIGMVVIRGNSVVMIEALEPVAK 72
Query: 79 SQ 80
SQ
Sbjct: 73 SQ 74
>gi|195645046|gb|ACG41991.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 73
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 60/62 (96%)
Query: 19 QIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVSK 78
QIK+NANR+++GTLRGFDQFMNLV+DNTVEVNGN+K DIGMVVIRGNSVV +EALEPV++
Sbjct: 12 QIKMNANRVVIGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMVVIRGNSVVMIEALEPVAR 71
Query: 79 SQ 80
SQ
Sbjct: 72 SQ 73
>gi|156405713|ref|XP_001640876.1| predicted protein [Nematostella vectensis]
gi|156228012|gb|EDO48813.1| predicted protein [Nematostella vectensis]
Length = 77
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKKYMDKKL +KLN R + G LRG+D FMNLV+D+ VE V+GNEK+ IGM
Sbjct: 1 MSKA-HPPELKKYMDKKLSLKLNGGRHVSGVLRGYDPFMNLVLDDAVENVSGNEKHAIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS+VT+EAL+ V
Sbjct: 60 VVIRGNSIVTMEALDRV 76
>gi|159471089|ref|XP_001693689.1| small nuclear ribonucleoprotein polypeptide G [Chlamydomonas
reinhardtii]
gi|158283192|gb|EDP08943.1| small nuclear ribonucleoprotein polypeptide G [Chlamydomonas
reinhardtii]
Length = 77
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
Query: 7 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNS 66
PP+LK++MDKKL I LNANR + GTLRGFDQFMNLV+D TV+ K DIGMVVIRGNS
Sbjct: 6 PPELKRFMDKKLSITLNANRHVSGTLRGFDQFMNLVLDATVD--EKLKVDIGMVVIRGNS 63
Query: 67 VVTVEALEPVS 77
+ T+EALEP++
Sbjct: 64 IQTIEALEPIA 74
>gi|440797084|gb|ELR18179.1| small nuclear ribonucleoprotein G, putative [Acanthamoeba
castellanii str. Neff]
Length = 76
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 59/68 (86%), Gaps = 1/68 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNS 66
PDL++YMDKKL I+LNANR + G LRGFDQFMNLV+++TV EV+ EKN++GMVVIRGNS
Sbjct: 7 PDLRRYMDKKLAIRLNANRRVSGILRGFDQFMNLVLEDTVEEVSSTEKNELGMVVIRGNS 66
Query: 67 VVTVEALE 74
V+ +E LE
Sbjct: 67 VILIEPLE 74
>gi|221120336|ref|XP_002162004.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Hydra
magnipapillata]
Length = 76
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 63/77 (81%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKKYMDK+L +KLN NR + G LRGFD FMNLVID+TVE + E+N+IGM
Sbjct: 1 MSKT-NPPELKKYMDKRLHLKLNCNRSVTGILRGFDPFMNLVIDDTVENTSTQERNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSVV +EAL+ +
Sbjct: 60 VVIRGNSVVLMEALDRI 76
>gi|302831688|ref|XP_002947409.1| hypothetical protein VOLCADRAFT_87780 [Volvox carteri f.
nagariensis]
gi|300267273|gb|EFJ51457.1| hypothetical protein VOLCADRAFT_87780 [Volvox carteri f.
nagariensis]
Length = 74
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
Query: 7 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNS 66
PP+LK++MDKKL I LNANR + GTLRGFDQFMN+V+D TV+ K DIGMVVIRGNS
Sbjct: 6 PPELKRFMDKKLSIHLNANRHVSGTLRGFDQFMNVVLDQTVD--EKLKVDIGMVVIRGNS 63
Query: 67 VVTVEALEPVS 77
+ T+EALEP++
Sbjct: 64 IQTIEALEPIN 74
>gi|112253333|gb|ABI14254.1| small nuclear ribonucleoprotein polypeptide G [Pfiesteria
piscicida]
Length = 78
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG-NEKNDIGM 59
MS++G DL+K+M+K+L +KL ANR +VG LRG+DQFMN+V+DNTVE+ EKN+IGM
Sbjct: 1 MSKAGAGADLRKFMEKRLDLKLTANRHVVGVLRGYDQFMNIVLDNTVEIASPTEKNEIGM 60
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ E L+ V
Sbjct: 61 VVIRGNSIMMWECLDRV 77
>gi|384244771|gb|EIE18269.1| small nuclear ribonucleo protein polypeptide G [Coccomyxa
subellipsoidea C-169]
Length = 73
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGN 65
QPP+LKK+MDKKL + LNANR + G LRGFDQFMN+V+DN V+ K DIGMVV+RGN
Sbjct: 5 QPPELKKFMDKKLSVSLNANRQVTGVLRGFDQFMNIVLDNAVD--EKNKTDIGMVVVRGN 62
Query: 66 SVVTVEALE 74
S++++EALE
Sbjct: 63 SIISLEALE 71
>gi|442754995|gb|JAA69657.1| Putative small nuclear ribonucleoprotein g [Ixodes ricinus]
Length = 77
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDKKL ++LN +R+I G LRGFD FMNLV+D TV E G EK+DIGM
Sbjct: 1 MSKA-HPPELKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGGEKHDIGM 59
Query: 60 VVIRGNSVVTVEA 72
VV+RGNS+V +E+
Sbjct: 60 VVVRGNSIVLLES 72
>gi|319401867|ref|NP_001187842.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
gi|308324118|gb|ADO29194.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
Length = 76
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 63/77 (81%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D+++E++ G ++N IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSIEISAGGQQNSIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|340370971|ref|XP_003384019.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Amphimedon queenslandica]
Length = 78
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS PP+LKKYMDK+LQ++LN NR I G LRGFD +MN+V+D+ V E + ++K +IGM
Sbjct: 1 MSGRAHPPELKKYMDKRLQLRLNGNRTITGILRGFDPYMNVVLDDCVEERSSHQKFNIGM 60
Query: 60 VVIRGNSVVTVEALEPV 76
VV+RGNSVV +EALE +
Sbjct: 61 VVVRGNSVVLIEALERI 77
>gi|350535404|ref|NP_001232194.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
gi|197127873|gb|ACH44371.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
Length = 74
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 61/76 (80%), Gaps = 2/76 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ G ++N+IGMV
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEICG-QQNNIGMV 58
Query: 61 VIRGNSVVTVEALEPV 76
VIRGNS++ +EALE V
Sbjct: 59 VIRGNSIIMLEALERV 74
>gi|307214549|gb|EFN89534.1| Probable small nuclear ribonucleoprotein G [Harpegnathos
saltator]
Length = 76
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDKKL +KLNA R + G LRGFD FMN+VID TV E KN+IGM
Sbjct: 1 MSKA-HPPELKKYMDKKLSLKLNAGRHVTGILRGFDPFMNMVIDETVEECKDGTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV+ +EAL+ +
Sbjct: 60 VVIRGNSVIMLEALDRI 76
>gi|291244885|ref|XP_002742321.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G-like
[Saccoglossus kowalevskii]
Length = 77
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRG+D FMNLV+D +V E++G EK+ IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRQVTGVLRGYDPFMNLVMDESVEEISGGEKHQIGM 59
Query: 60 VVIRGNSVVTVEALEPVS 77
VVIRGNS++ +EAL+ V+
Sbjct: 60 VVIRGNSIIMLEALDRVT 77
>gi|321461226|gb|EFX72260.1| hypothetical protein DAPPUDRAFT_189031 [Daphnia pulex]
Length = 77
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK++ +KLN R IVG LRGFD FMNLVID TV EV KN+IGM
Sbjct: 1 MSKA-HPPELKKYMDKRMSLKLNGGRNIVGILRGFDPFMNLVIDETVEEVKDGSKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VV+RGNS++ +EALE +
Sbjct: 60 VVVRGNSIIMLEALERI 76
>gi|308321244|gb|ADO27774.1| small nuclear ribonucleoprotein g [Ictalurus furcatus]
Length = 76
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 63/77 (81%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D+++E++ G ++N IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSIEISAGGQQNPIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|197127872|gb|ACH44370.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
Length = 76
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ G ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMAAGGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|390331570|ref|XP_788177.3| PREDICTED: small nuclear ribonucleoprotein G-like
[Strongylocentrotus purpuratus]
Length = 77
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKK+MDK+L +KLN NR + G LRGFD FMNLVID E ++ +KNDIGM
Sbjct: 1 MSKA-HPPELKKFMDKRLSLKLNGNRRVTGVLRGFDPFMNLVIDEATEDISTTQKNDIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VV+RGNS++ +EAL+ V
Sbjct: 60 VVVRGNSIILLEALDRV 76
>gi|194763519|ref|XP_001963880.1| GF21254 [Drosophila ananassae]
gi|190618805|gb|EDV34329.1| GF21254 [Drosophila ananassae]
Length = 101
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK++ +KLN R + G LRGFD FMN+V+D+TV E N KN+IGM
Sbjct: 26 MSKA-HPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGM 84
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS+V VEAL+ V
Sbjct: 85 VVIRGNSIVMVEALDRV 101
>gi|196476795|gb|ACG76261.1| small nuclear ribonucleoprotein G [Amblyomma americanum]
Length = 77
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDKKL ++LN +R+I G LRGFD FMNLV+D TV E G EK++IGM
Sbjct: 1 MSKA-HPPELKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEEAKGGEKHNIGM 59
Query: 60 VVIRGNSVVTVEALEPVS 77
VV+RGNS+V +E+ + ++
Sbjct: 60 VVVRGNSIVLLESQDRIA 77
>gi|291386619|ref|XP_002709854.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G
[Oryctolagus cuniculus]
Length = 76
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ N ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMANSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|196009502|ref|XP_002114616.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582678|gb|EDV22750.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 76
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKK+M+K+L IK+N NR +VGTLRGFD FMN+V+D+TVE V+ E N +GM
Sbjct: 1 MSKA-HPPELKKFMEKRLSIKINGNRTVVGTLRGFDPFMNIVLDDTVEQVSSKENNHLGM 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNSVV +E L
Sbjct: 60 VVIRGNSVVMMEVLH 74
>gi|118101457|ref|XP_001233287.1| PREDICTED: uncharacterized protein LOC771344 isoform 1 [Gallus
gallus]
gi|126303310|ref|XP_001372569.1| PREDICTED: small nuclear ribonucleoprotein G-like [Monodelphis
domestica]
gi|395507378|ref|XP_003758002.1| PREDICTED: small nuclear ribonucleoprotein G [Sarcophilus
harrisii]
gi|387018738|gb|AFJ51487.1| Sm protein G [Crotalus adamanteus]
Length = 76
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ G ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMAPGGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|284413736|ref|NP_001165120.1| small nuclear ribonucleoprotein polypeptide G [Xenopus (Silurana)
tropicalis]
gi|138519693|gb|AAI35835.1| LOC100125174 protein [Xenopus (Silurana) tropicalis]
Length = 76
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID E++ G +N IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECTEISGGGHQNTIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|193713710|ref|XP_001949387.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Acyrthosiphon pisum]
Length = 79
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LK+Y+DKKL +KLNANR + G LRGFD FMNLV+D TVE + N IGM
Sbjct: 1 MSKA-HPPELKRYLDKKLSLKLNANRQVAGVLRGFDPFMNLVLDETVEKIKDGVVNSIGM 59
Query: 60 VVIRGNSVVTVEALEPVSKS 79
VVIRG+SV+T+EAL+ + +
Sbjct: 60 VVIRGDSVLTIEALDRIDQH 79
>gi|194891288|ref|XP_001977464.1| GG18240 [Drosophila erecta]
gi|195479283|ref|XP_002100833.1| GE15956 [Drosophila yakuba]
gi|190649113|gb|EDV46391.1| GG18240 [Drosophila erecta]
gi|194188357|gb|EDX01941.1| GE15956 [Drosophila yakuba]
Length = 76
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK++ +KLN R + G LRGFD FMN+V+D+TV E N KN+IGM
Sbjct: 1 MSKA-HPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS+V VEAL+ V
Sbjct: 60 VVIRGNSIVMVEALDRV 76
>gi|195134290|ref|XP_002011570.1| GI11102 [Drosophila mojavensis]
gi|195399181|ref|XP_002058199.1| GJ15956 [Drosophila virilis]
gi|193906693|gb|EDW05560.1| GI11102 [Drosophila mojavensis]
gi|194150623|gb|EDW66307.1| GJ15956 [Drosophila virilis]
Length = 76
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK++ +KLN R + G LRGFD FMN+V+D+TV E N KN IGM
Sbjct: 1 MSKA-HPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNSIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS+V VEAL+ V
Sbjct: 60 VVIRGNSIVMVEALDRV 76
>gi|358421445|ref|XP_003584961.1| PREDICTED: small nuclear ribonucleoprotein G-like [Bos taurus]
gi|296486781|tpg|DAA28894.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 76
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R++ G LRGFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRLVQGILRGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|268834043|ref|NP_001161373.1| small nuclear ribonucleoprotein polypeptide G isoform 1 [Danio
rerio]
gi|268834149|ref|NP_001004660.2| small nuclear ribonucleoprotein polypeptide G isoform 2 [Danio
rerio]
Length = 76
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D+T+E+ G + N IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDTIEMAPGGQMNTIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|427784695|gb|JAA57799.1| Putative small ribonucleoprotein particle protein smg
[Rhipicephalus pulchellus]
Length = 77
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDKKL ++LN +R++ G LRGFD FMNLV+D TV E G EK++IGM
Sbjct: 1 MSKA-HPPELKKYMDKKLSLRLNGSRVVTGILRGFDPFMNLVLDETVEETKGGEKHNIGM 59
Query: 60 VVIRGNSVVTVEA 72
VV+RGNS+V +E+
Sbjct: 60 VVVRGNSIVLLES 72
>gi|195042091|ref|XP_001991363.1| GH12097 [Drosophila grimshawi]
gi|193901121|gb|EDV99987.1| GH12097 [Drosophila grimshawi]
Length = 76
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK++ +KLN R + G LRGFD FMN+V+D+T+ E N KN IGM
Sbjct: 1 MSKA-HPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTIEECKDNTKNSIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS+V VEAL+ V
Sbjct: 60 VVIRGNSIVMVEALDRV 76
>gi|229367628|gb|ACQ58794.1| Small nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 76
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D+++E+ G ++N IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSLEMGPGGQQNTIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|51858986|gb|AAH81512.1| Zgc:103688 [Danio rerio]
gi|182890240|gb|AAI65520.1| Zgc:103688 protein [Danio rerio]
Length = 76
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIR 63
PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D+T+E+ G + N IGMVVIR
Sbjct: 4 AHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDTIEMAPGGQMNTIGMVVIR 63
Query: 64 GNSVVTVEALEPV 76
GNS++ +EALE V
Sbjct: 64 GNSIIMLEALERV 76
>gi|294891050|ref|XP_002773395.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
gi|239878548|gb|EER05211.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
Length = 85
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 1/77 (1%)
Query: 3 RSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVV 61
++G DL+K+M+K+L +KLN NR +VG LRG+DQFMNLV+DN VE V+ EK DIGM V
Sbjct: 9 KAGAGADLRKFMEKRLDLKLNGNRHVVGVLRGYDQFMNLVLDNAVELVSRTEKKDIGMTV 68
Query: 62 IRGNSVVTVEALEPVSK 78
IRGNSV+ E L+ V++
Sbjct: 69 IRGNSVLMWECLDRVTQ 85
>gi|291398958|ref|XP_002715163.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G
[Oryctolagus cuniculus]
Length = 76
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD F+NLVID VE+ N ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFINLVIDECVEMANSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALEQV 76
>gi|410930990|ref|XP_003978880.1| PREDICTED: small nuclear ribonucleoprotein G-like [Takifugu
rubripes]
gi|47207638|emb|CAF90891.1| unnamed protein product [Tetraodon nigroviridis]
Length = 76
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D T+E+ G +++ IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDETLEMGPGGQQSSIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|348540852|ref|XP_003457901.1| PREDICTED: small nuclear ribonucleoprotein G-like [Oreochromis
niloticus]
Length = 76
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D+ +E+ G ++N IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDCLEMGPGGQQNTIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|66525153|ref|XP_625205.1| PREDICTED: probable small nuclear ribonucleoprotein G [Apis
mellifera]
gi|380016176|ref|XP_003692064.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Apis
florea]
Length = 76
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDKKL +KLN R ++G LRGFD FMN+VID ++ E KN+IGM
Sbjct: 1 MSKA-HPPELKKYMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESIEECKDGTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV+ +EAL+ +
Sbjct: 60 VVIRGNSVIMLEALDRI 76
>gi|4507133|ref|NP_003087.1| small nuclear ribonucleoprotein G [Homo sapiens]
gi|13385994|ref|NP_080782.1| small nuclear ribonucleoprotein G [Mus musculus]
gi|94966887|ref|NP_001035633.1| small nuclear ribonucleoprotein G [Bos taurus]
gi|205360903|ref|NP_001128557.1| small nuclear ribonucleoprotein polypeptide G [Rattus norvegicus]
gi|301172846|ref|NP_001180369.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|356640205|ref|NP_001239260.1| small nuclear ribonucleoprotein G [Canis lupus familiaris]
gi|109461740|ref|XP_001079708.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|296223614|ref|XP_002757696.1| PREDICTED: small nuclear ribonucleoprotein G-like [Callithrix
jacchus]
gi|297667399|ref|XP_002811973.1| PREDICTED: small nuclear ribonucleoprotein G isoform 2 [Pongo
abelii]
gi|301758206|ref|XP_002914946.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ailuropoda
melanoleuca]
gi|311252444|ref|XP_003125100.1| PREDICTED: small nuclear ribonucleoprotein G-like [Sus scrofa]
gi|332226773|ref|XP_003262565.1| PREDICTED: small nuclear ribonucleoprotein G isoform 1 [Nomascus
leucogenys]
gi|338714212|ref|XP_003363026.1| PREDICTED: small nuclear ribonucleoprotein G-like [Equus
caballus]
gi|344283913|ref|XP_003413715.1| PREDICTED: small nuclear ribonucleoprotein G-like [Loxodonta
africana]
gi|348566567|ref|XP_003469073.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|354491761|ref|XP_003508023.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|392344154|ref|XP_003748887.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|402891180|ref|XP_003908832.1| PREDICTED: small nuclear ribonucleoprotein G [Papio anubis]
gi|403260478|ref|XP_003922698.1| PREDICTED: small nuclear ribonucleoprotein G [Saimiri boliviensis
boliviensis]
gi|410955001|ref|XP_003984147.1| PREDICTED: small nuclear ribonucleoprotein G [Felis catus]
gi|426223378|ref|XP_004005852.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
gi|59800216|sp|P62308.1|RUXG_HUMAN RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|59800217|sp|P62309.1|RUXG_MOUSE RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|109894862|sp|Q3ZBL0.1|RUXG_BOVIN RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|225734046|pdb|3CW1|G Chain G, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734055|pdb|3CW1|3 Chain 3, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734064|pdb|3CW1|4 Chain 4, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734073|pdb|3CW1|5 Chain 5, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|315583606|pdb|3PGW|G Chain G, Crystal Structure Of Human U1 Snrnp
gi|315583615|pdb|3PGW|J Chain J, Crystal Structure Of Human U1 Snrnp
gi|332639439|pdb|2Y9A|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639446|pdb|2Y9A|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639453|pdb|2Y9A|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639463|pdb|2Y9B|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639470|pdb|2Y9B|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639477|pdb|2Y9B|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639487|pdb|2Y9C|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639494|pdb|2Y9C|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639501|pdb|2Y9C|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639511|pdb|2Y9D|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639518|pdb|2Y9D|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639525|pdb|2Y9D|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|343781214|pdb|3S6N|G Chain G, Crystal Structure Of The Gemin2-Binding Domain Of Smn,
Gemin2 In Complex With Smd1D2FEG FROM HUMAN
gi|444302204|pdb|4F7U|G Chain G, Macromolecular Machine 6
gi|444302205|pdb|4F7U|J Chain J, Macromolecular Machine 6
gi|453055429|pdb|1VU2|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453055437|pdb|1VU2|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453055445|pdb|1VU2|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453055453|pdb|1VU2|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453055461|pdb|1VU2|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453055469|pdb|1VU2|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453055473|pdb|1VU2|4 Chain 4, The 8s Snrnp Assembly Intermediate
gi|453055485|pdb|1VU3|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453055493|pdb|1VU3|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453055501|pdb|1VU3|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453055509|pdb|1VU3|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453055517|pdb|1VU3|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453055525|pdb|1VU3|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453056017|pdb|4F77|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453056025|pdb|4F77|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453056033|pdb|4F77|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453056041|pdb|4F77|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453056049|pdb|4F77|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453056057|pdb|4F77|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453056061|pdb|4F77|4 Chain 4, The 8s Snrnp Assembly Intermediate
gi|806566|emb|CAA59689.1| Sm protein G [Homo sapiens]
gi|12652645|gb|AAH00070.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|12849786|dbj|BAB28480.1| unnamed protein product [Mus musculus]
gi|12850471|dbj|BAB28732.1| unnamed protein product [Mus musculus]
gi|18490257|gb|AAH22432.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|20380602|gb|AAH27499.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|30185984|gb|AAH51470.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|42542824|gb|AAH66302.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|47682759|gb|AAH70166.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|48145953|emb|CAG33199.1| SNRPG [Homo sapiens]
gi|62420278|gb|AAX81996.1| unknown [Homo sapiens]
gi|62948132|gb|AAH94411.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|73586825|gb|AAI03237.1| Small nuclear ribonucleoprotein polypeptide G [Bos taurus]
gi|76779243|gb|AAI06056.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|119620223|gb|EAW99817.1| small nuclear ribonucleoprotein polypeptide G, isoform CRA_a
[Homo sapiens]
gi|119620224|gb|EAW99818.1| small nuclear ribonucleoprotein polypeptide G, isoform CRA_a
[Homo sapiens]
gi|127799349|gb|AAH71880.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|148666745|gb|EDK99161.1| mCG130514, isoform CRA_a [Mus musculus]
gi|149036610|gb|EDL91228.1| rCG56468, isoform CRA_b [Rattus norvegicus]
gi|197246583|gb|AAI68750.1| Snrpg protein [Rattus norvegicus]
gi|208967440|dbj|BAG73734.1| small nuclear ribonucleoprotein polypeptide G [synthetic
construct]
gi|296477039|tpg|DAA19154.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
gi|296482417|tpg|DAA24532.1| TPA: small nuclear ribonucleoprotein G [Bos taurus]
gi|312153260|gb|ADQ33142.1| small nuclear ribonucleoprotein polypeptide G [synthetic
construct]
gi|380808500|gb|AFE76125.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|384944568|gb|AFI35889.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|410265648|gb|JAA20790.1| small nuclear ribonucleoprotein polypeptide G [Pan troglodytes]
gi|410348384|gb|JAA40796.1| small nuclear ribonucleoprotein polypeptide G [Pan troglodytes]
gi|431912604|gb|ELK14622.1| Small nuclear ribonucleoprotein G [Pteropus alecto]
Length = 76
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|443719153|gb|ELU09428.1| hypothetical protein CAPTEDRAFT_156804 [Capitella teleta]
Length = 76
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKKYMDK+L +KLN R++ GTLRGFD FMNLV+D +E E+N IGM
Sbjct: 1 MSKA-HPPELKKYMDKRLTLKLNGGRVVTGTLRGFDPFMNLVVDEAIEQCKTGEQNSIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VV+RGNS+ +EAL+ V
Sbjct: 60 VVVRGNSITLLEALDRV 76
>gi|410957729|ref|XP_003985477.1| PREDICTED: small nuclear ribonucleoprotein G-like [Felis catus]
Length = 76
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FM+LVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDSFMHLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|18860007|ref|NP_573139.1| small ribonucleoprotein particle protein SmG, isoform A
[Drosophila melanogaster]
gi|221372123|ref|NP_001138209.1| small ribonucleoprotein particle protein SmG, isoform B
[Drosophila melanogaster]
gi|195351500|ref|XP_002042272.1| GM13382 [Drosophila sechellia]
gi|195567140|ref|XP_002107128.1| GD15738 [Drosophila simulans]
gi|29428065|sp|Q9VXE0.1|RUXG_DROME RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|7293253|gb|AAF48634.1| small ribonucleoprotein particle protein SmG, isoform A
[Drosophila melanogaster]
gi|17944563|gb|AAL48169.1| RH35475p [Drosophila melanogaster]
gi|194124115|gb|EDW46158.1| GM13382 [Drosophila sechellia]
gi|194204529|gb|EDX18105.1| GD15738 [Drosophila simulans]
gi|220901796|gb|ACL82939.1| small ribonucleoprotein particle protein SmG, isoform B
[Drosophila melanogaster]
gi|220952224|gb|ACL88655.1| SmG-PA [synthetic construct]
Length = 76
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP++KKYMDK++ +KLN R + G LRGFD FMN+V+D+TV E N KN+IGM
Sbjct: 1 MSKA-HPPEVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS+V VEAL+ V
Sbjct: 60 VVIRGNSIVMVEALDRV 76
>gi|209879283|ref|XP_002141082.1| small nuclear ribonucleoprotein G [Cryptosporidium muris RN66]
gi|209556688|gb|EEA06733.1| small nuclear ribonucleoprotein G, putative [Cryptosporidium
muris RN66]
Length = 81
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 55/75 (73%)
Query: 3 RSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVI 62
+SG P DL+++MDK+L IKLN R IVG LRG+D FMNLV++NTVEV +IG V+I
Sbjct: 5 KSGSPADLRRFMDKRLDIKLNGKRHIVGLLRGYDNFMNLVLENTVEVTSKGNKEIGTVII 64
Query: 63 RGNSVVTVEALEPVS 77
RGNSVV E L+ V
Sbjct: 65 RGNSVVMWECLDKVH 79
>gi|432864568|ref|XP_004070353.1| PREDICTED: small nuclear ribonucleoprotein G-like [Oryzias
latipes]
Length = 76
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D+ +E+ G ++N IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVMDDCLEMGPGGQQNTIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|91093719|ref|XP_967705.1| PREDICTED: similar to small nuclear ribonucleoprotein G
[Tribolium castaneum]
gi|270012988|gb|EFA09436.1| hypothetical protein TcasGA2_TC010648 [Tribolium castaneum]
Length = 76
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R +VG LRGFD FMNLV+D +V E +KN+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLCLKLNGGRQVVGILRGFDPFMNLVVDESVEECRDGKKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS+V +EAL+ +
Sbjct: 60 VVIRGNSIVMLEALDRI 76
>gi|383851818|ref|XP_003701428.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Megachile rotundata]
Length = 76
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK+L +KLN R +VG LRGFD FMN+VID ++ E KN+IGM
Sbjct: 1 MSKA-HPPELKKYMDKRLSLKLNGGRHVVGILRGFDPFMNMVIDESIEECKDGTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV+ +EAL+ +
Sbjct: 60 VVIRGNSVIMLEALDRI 76
>gi|340725441|ref|XP_003401078.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Bombus terrestris]
gi|350403951|ref|XP_003486961.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Bombus impatiens]
gi|307172241|gb|EFN63758.1| Probable small nuclear ribonucleoprotein G [Camponotus
floridanus]
Length = 76
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK+L +KLN R ++G LRGFD FMN+VID +V E KN+IGM
Sbjct: 1 MSKA-HPPELKKYMDKRLSLKLNGGRHVIGILRGFDPFMNMVIDESVEECKDGTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV+ +EAL+ +
Sbjct: 60 VVIRGNSVIMLEALDRI 76
>gi|62083383|gb|AAX62416.1| small nuclear ribonucleoprotein G [Lysiphlebus testaceipes]
Length = 76
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDKKL +KLN R ++G LRGFD FMN+VID +V E +N+IGM
Sbjct: 1 MSKA-HPPELKKYMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESVEECKDGSQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV+ +EAL+ +
Sbjct: 60 VVIRGNSVIMLEALDRI 76
>gi|284413738|ref|NP_001165121.1| small nuclear ribonucleoprotein polypeptide G [Xenopus laevis]
gi|114107958|gb|AAI23340.1| MGC154809 protein [Xenopus laevis]
Length = 76
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGM 59
MS++ PP+LKK+MDKKL +K+N R + G LRGFD FMNLV+D + E++G+ +N IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKINGGRQVQGILRGFDPFMNLVLDESTEISGSGNQNSIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|432112555|gb|ELK35271.1| Small nuclear ribonucleoprotein G [Myotis davidii]
Length = 76
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ G ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATGGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
V I+GNS++ +EALE V
Sbjct: 60 VAIQGNSIIMLEALERV 76
>gi|82793460|ref|XP_728048.1| small nuclear ribonucleoprotein polypeptide G [Plasmodium yoelii
yoelii 17XNL]
gi|23484203|gb|EAA19613.1| putative small nuclear ribonucleoprotein polypeptide G
[Plasmodium yoelii yoelii]
Length = 83
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 59/77 (76%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
+ ++G D +K+M+K+LQI LN NR+IVG LRG+D FMNLV+DNTVE+ +E +IG+V
Sbjct: 5 VGKAGPASDFRKFMEKRLQIYLNGNRLIVGVLRGYDTFMNLVLDNTVEIKKDENIEIGIV 64
Query: 61 VIRGNSVVTVEALEPVS 77
VIRGNS+ E L+ V+
Sbjct: 65 VIRGNSISYWECLDKVT 81
>gi|195447608|ref|XP_002071290.1| GK25208 [Drosophila willistoni]
gi|194167375|gb|EDW82276.1| GK25208 [Drosophila willistoni]
Length = 76
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK++ +KLN R + G LRGFD FMN+V+D+T+ E N KN+IGM
Sbjct: 1 MSKA-HPPELKKYMDKRMMLKLNGGRAVNGILRGFDPFMNVVLDDTIEECKDNTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS+V VEAL+ V
Sbjct: 60 VVIRGNSIVMVEALDRV 76
>gi|357619057|gb|EHJ71789.1| small nuclear ribonucleoprotein G [Danaus plexippus]
Length = 76
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKK+MDKKL IKLNA R + G LRGFD FMNLV+D +V E ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +E+L+ +
Sbjct: 60 VVIRGNSIIMLESLDRI 76
>gi|332018098|gb|EGI58712.1| Putative small nuclear ribonucleoprotein G [Acromyrmex
echinatior]
Length = 76
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK+L +KLN R +VG LRGFD FMN+VID ++ E KN+IGM
Sbjct: 1 MSKA-HPPELKKYMDKRLSLKLNGGRRVVGILRGFDPFMNMVIDESIEECKDGTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV+ +EAL+ +
Sbjct: 60 VVIRGNSVIMLEALDRI 76
>gi|322800993|gb|EFZ21774.1| hypothetical protein SINV_00836 [Solenopsis invicta]
Length = 76
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK+L +KLN R ++G LRGFD FMN+VID ++ E KN+IGM
Sbjct: 1 MSKA-HPPELKKYMDKRLSLKLNGGRTVIGILRGFDPFMNMVIDESIEECKDGTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV+ +EAL+ +
Sbjct: 60 VVIRGNSVIMLEALDRI 76
>gi|242018957|ref|XP_002429935.1| membrane-associated protein, putative [Pediculus humanus
corporis]
gi|212514981|gb|EEB17197.1| membrane-associated protein, putative [Pediculus humanus
corporis]
Length = 76
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID +VE+ N N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLALKLNGGRQVNGILRGFDPFMNLVIDESVEICKNGTHNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSVV +EAL+ V
Sbjct: 60 VVIRGNSVVMLEALDRV 76
>gi|68069273|ref|XP_676547.1| small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56496296|emb|CAH97122.1| small nuclear ribonucleoprotein, putative [Plasmodium berghei]
Length = 83
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 59/77 (76%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
+ ++G D +K+M+K+LQI LN NR+IVG LRG+D FMNLV+DNT+E+ +E +IG+V
Sbjct: 5 VGKAGPASDFRKFMEKRLQIYLNGNRLIVGVLRGYDTFMNLVLDNTIEIKKDENIEIGIV 64
Query: 61 VIRGNSVVTVEALEPVS 77
VIRGNS+ E L+ V+
Sbjct: 65 VIRGNSISYWECLDKVT 81
>gi|156541626|ref|XP_001601035.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Nasonia vitripennis]
Length = 76
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R ++G LRGFD FMN+VID ++ E KN+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESIEECKDGTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV+ +EAL+ +
Sbjct: 60 VVIRGNSVIMLEALDRI 76
>gi|70944596|ref|XP_742213.1| small nuclear ribonucleoprotein [Plasmodium chabaudi chabaudi]
gi|56521062|emb|CAH84531.1| small nuclear ribonucleoprotein, putative [Plasmodium chabaudi
chabaudi]
Length = 83
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 59/77 (76%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
+ ++G D +K+M+K+LQI LN NR+IVG LRG+D FMNLV+DNTVE+ +E +IG+V
Sbjct: 5 VGKAGPASDFRKFMEKRLQIYLNGNRLIVGVLRGYDTFMNLVLDNTVEIKKDENIEIGIV 64
Query: 61 VIRGNSVVTVEALEPVS 77
VIRGNS+ E L+ V+
Sbjct: 65 VIRGNSISYWECLDKVN 81
>gi|355750359|gb|EHH54697.1| hypothetical protein EGM_15585 [Macaca fascicularis]
Length = 76
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL KLN R + G LRGFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSSKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|355751391|gb|EHH55646.1| hypothetical protein EGM_04892 [Macaca fascicularis]
Length = 76
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FM LVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMTLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|195144580|ref|XP_002013274.1| GL24044 [Drosophila persimilis]
gi|198452776|ref|XP_002137534.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
gi|194102217|gb|EDW24260.1| GL24044 [Drosophila persimilis]
gi|198132072|gb|EDY68092.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
Length = 76
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK++ +KLN R + G LRGFD FMN+V+D+T+ E KN++GM
Sbjct: 1 MSKA-HPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTIEECKDKTKNNVGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS+V VEAL+ V
Sbjct: 60 VVIRGNSIVLVEALDRV 76
>gi|426238536|ref|XP_004013207.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRG D FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGLDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|156097813|ref|XP_001614939.1| small nuclear ribonucleoprotein G [Plasmodium vivax Sal-1]
gi|148803813|gb|EDL45212.1| small nuclear ribonucleoprotein G, putative [Plasmodium vivax]
gi|389582433|dbj|GAB65171.1| small nuclear ribonucleoprotein G [Plasmodium cynomolgi strain B]
Length = 83
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 57/76 (75%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
+ ++G D +K+M+K+LQ+ LN NR IVG LRG+D FMNLV+DNTVE+ E+ DIG+V
Sbjct: 5 VGKAGPASDFRKFMEKRLQVYLNGNRQIVGVLRGYDTFMNLVLDNTVEIKKEEQIDIGIV 64
Query: 61 VIRGNSVVTVEALEPV 76
VIRGNS+ E L+ V
Sbjct: 65 VIRGNSISYWECLDRV 80
>gi|109122308|ref|XP_001087684.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
gi|354490736|ref|XP_003507512.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344246755|gb|EGW02859.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G L GFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|221220698|gb|ACM09010.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|221221936|gb|ACM09629.1| Small nuclear ribonucleoprotein G [Salmo salar]
Length = 76
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D+ +E+ G +N IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRQVQGVLRGFDPFMNLVMDDCLEMAPGGIQNTIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|426248212|ref|XP_004017858.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R++ G L GFD FMNLVID VE+ ++N+ GM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRLVQGILWGFDPFMNLVIDECVEMATSGQQNNFGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|332376801|gb|AEE63540.1| unknown [Dendroctonus ponderosae]
Length = 76
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D ++ E KN+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLCLKLNGGRQVTGILRGFDPFMNLVVDESIEECRDGTKNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS+V +EAL+ +
Sbjct: 60 VVIRGNSIVMLEALDRI 76
>gi|255076665|ref|XP_002502006.1| predicted protein [Micromonas sp. RCC299]
gi|226517271|gb|ACO63264.1| predicted protein [Micromonas sp. RCC299]
Length = 81
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSV 67
P+LK+YMDKKL++KLN NR +VG LRGFDQF+NLV+D G +K +GMVV+RGNSV
Sbjct: 6 PELKQYMDKKLRLKLNGNRGVVGVLRGFDQFLNLVLDEAHNDVGPDKEPLGMVVVRGNSV 65
Query: 68 VTVEALEPVSKSQ 80
+EALE + K++
Sbjct: 66 QAMEALEHIPKAK 78
>gi|124512338|ref|XP_001349302.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|23499071|emb|CAD51151.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 83
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 59/77 (76%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
+ ++G D +K+M+K+LQI LN NR +VG LRG+D FMNLV+DNT+E+ +E+ DIG+V
Sbjct: 5 VGKAGPASDFRKFMEKRLQIYLNGNRQVVGILRGYDTFMNLVLDNTMEIKKDEQIDIGVV 64
Query: 61 VIRGNSVVTVEALEPVS 77
VIRGNS+ E L+ V+
Sbjct: 65 VIRGNSISYWECLDKVN 81
>gi|114050793|ref|NP_001040405.1| small nuclear ribonucleoprotein G [Bombyx mori]
gi|95102770|gb|ABF51326.1| small nuclear ribonucleoprotein G [Bombyx mori]
Length = 76
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKK+MDKK IKLNA R + G LRGFD FMNLV+D +V E ++N++GM
Sbjct: 1 MSKA-HPPELKKFMDKKWSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGM 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNS++ +E+L+
Sbjct: 60 VVIRGNSIIMLESLD 74
>gi|345778417|ref|XP_003431727.1| PREDICTED: uncharacterized protein LOC100682645 [Canis lupus
familiaris]
Length = 181
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 57/75 (76%), Gaps = 1/75 (1%)
Query: 3 RSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVV 61
+S QPP LKK+MDKKL +KLN R + G L+GFD FMNLVID VE+ ++N+IGMVV
Sbjct: 107 QSSQPPKLKKFMDKKLSLKLNDGRHVQGILQGFDPFMNLVIDECVEMATSGQQNNIGMVV 166
Query: 62 IRGNSVVTVEALEPV 76
IRGN+++ +E LE V
Sbjct: 167 IRGNNIIMLEGLERV 181
>gi|428181287|gb|EKX50151.1| small nuclear ribonucleo protein polypeptide G [Guillardia theta
CCMP2712]
Length = 78
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNS 66
PDLKKYMDK++ +KLNANR I G LRG+DQFMNLV+D+T E V ++N+IGMVV+RGNS
Sbjct: 7 PDLKKYMDKRVTLKLNANRNITGILRGYDQFMNLVLDHTQEVVTPTQRNEIGMVVVRGNS 66
Query: 67 VVTVEALEPV 76
+ VE ++ V
Sbjct: 67 ISMVECVDRV 76
>gi|294887859|ref|XP_002772254.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
gi|239876324|gb|EER04070.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
Length = 87
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 3 RSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVV 61
++G DL+++M+K++ +KLNA+R +VG +RG+DQFMNLV+DN VE V+ EK +IGMVV
Sbjct: 10 KAGAGADLRRFMEKRIDVKLNADRHVVGVVRGYDQFMNLVLDNAVELVSRTEKREIGMVV 69
Query: 62 IRGNSVVTVEALEPV 76
IRGNS++ E L+ V
Sbjct: 70 IRGNSILMWECLDRV 84
>gi|109510961|ref|XP_001057009.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392343298|ref|XP_003754845.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392355788|ref|XP_003752134.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G L+GFD FM+LVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILQGFDPFMSLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|157119614|ref|XP_001659450.1| Sm protein G, putative [Aedes aegypti]
gi|108875262|gb|EAT39487.1| AAEL008719-PA [Aedes aegypti]
Length = 76
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIR 63
PP+LKKYMDK+L +KLN R++ G LRGFD FMN+V+D ++ E + +N+IGMVVIR
Sbjct: 4 AHPPELKKYMDKRLSLKLNGGRVVSGILRGFDPFMNVVLDESIEECKDSTRNNIGMVVIR 63
Query: 64 GNSVVTVEALEPV 76
GNS++ VEAL+ +
Sbjct: 64 GNSIIMVEALDRI 76
>gi|296488612|tpg|DAA30725.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 76
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP LKK+MDKKL +KLN R + G L GFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPKLKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|384497931|gb|EIE88422.1| hypothetical protein RO3G_13133 [Rhizopus delemar RA 99-880]
Length = 76
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNS 66
P+LKKYMDK++ ++LN NR + G LRG+D FMN+V+D TV EV+ E+N+IGMVVIRGNS
Sbjct: 7 PELKKYMDKRISLQLNGNRKVTGVLRGYDPFMNIVLDETVEEVSPTERNNIGMVVIRGNS 66
Query: 67 VVTVEALEPV 76
+ +EALE +
Sbjct: 67 IAIMEALERI 76
>gi|58382854|ref|XP_312222.2| AGAP002706-PA [Anopheles gambiae str. PEST]
gi|170033098|ref|XP_001844416.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|55242066|gb|EAA07689.2| AGAP002706-PA [Anopheles gambiae str. PEST]
gi|167873530|gb|EDS36913.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 76
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK+L +KLN R++ G LRGFD FMN+V+D ++ E +N+IGM
Sbjct: 1 MSKA-HPPELKKYMDKRLSLKLNGGRVVSGILRGFDPFMNVVVDESIEECKDGTRNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ VEAL+ +
Sbjct: 60 VVIRGNSIIMVEALDRI 76
>gi|383420999|gb|AFH33713.1| small nuclear ribonucleoprotein G [Macaca mulatta]
Length = 76
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIR 63
P+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIR
Sbjct: 4 AHSPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIR 63
Query: 64 GNSVVTVEALEPV 76
GNS++ +EALE V
Sbjct: 64 GNSIIMLEALERV 76
>gi|213513524|ref|NP_001134580.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|209734434|gb|ACI68086.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|303659717|gb|ADM15968.1| Small nuclear ribonucleoprotein G [Salmo salar]
Length = 76
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLV+D+ +E+ G +N IG+
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRQVQGVLRGFDPFMNLVMDDCLEMAPGGIQNTIGL 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|440900234|gb|ELR51419.1| Small nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 76
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP LKK+MDKK+ +KLN R + G L+GFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPKLKKFMDKKVSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALEQV 76
>gi|221053452|ref|XP_002258100.1| small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|193807933|emb|CAQ38637.1| small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
Length = 83
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 57/76 (75%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
+ ++G D +K+M+K+LQ+ LN NR IVG LRG+D FMNLV+DNTVE+ ++ DIG+V
Sbjct: 5 VGKAGPSSDFRKFMEKRLQVYLNGNRQIVGVLRGYDTFMNLVLDNTVEIKKEQQIDIGIV 64
Query: 61 VIRGNSVVTVEALEPV 76
VIRGNS+ E L+ V
Sbjct: 65 VIRGNSISYWECLDRV 80
>gi|315046146|ref|XP_003172448.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|327305055|ref|XP_003237219.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|311342834|gb|EFR02037.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|326460217|gb|EGD85670.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|326472004|gb|EGD96013.1| small nuclear ribonucleoprotein SmG [Trichophyton tonsurans CBS
112818]
gi|326477131|gb|EGE01141.1| small nuclear ribonucleoprotein SmG [Trichophyton equinum CBS
127.97]
Length = 78
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K+L ++LN NR ++G LRG+D FMN+V+D+ VE NG EK +GMVVIRGNS
Sbjct: 6 PELKKYMEKRLFVQLNGNRKVIGVLRGYDVFMNIVLDDAVEEKNGGEKVPLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +S
Sbjct: 66 VVMLEALERIS 76
>gi|403301993|ref|XP_003941654.1| PREDICTED: small nuclear ribonucleoprotein G-like [Saimiri
boliviensis boliviensis]
Length = 76
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G L GFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGN ++ +EALE V
Sbjct: 60 VVIRGNGIIMLEALERV 76
>gi|294950648|ref|XP_002786721.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
gi|239901040|gb|EER18517.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
Length = 87
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 3 RSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVV 61
++G DL+++M+K++ +KLNA+R +VG +RG+DQFMNLV+DN VE V+ EK +IGM V
Sbjct: 10 KAGAGADLRRFMEKRIDVKLNADRHVVGVVRGYDQFMNLVLDNAVELVSRTEKREIGMAV 69
Query: 62 IRGNSVVTVEALEPV 76
IRGNS++ E L+ V
Sbjct: 70 IRGNSILMWECLDRV 84
>gi|293345587|ref|XP_002726075.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE V ++N IG
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGTRRVQGILRGFDPFMNLVIDECVEMVTSGQQNIIGT 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +E LE V
Sbjct: 60 VVIRGNSIIMLETLERV 76
>gi|426257282|ref|XP_004022258.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP LKK+MDKKL +KLN R + G L+GFD FMNLVID VE+ ++N+ GM
Sbjct: 1 MSKA-HPPKLKKFMDKKLSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNNTGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|354481504|ref|XP_003502941.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344250923|gb|EGW07027.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ P+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+I M
Sbjct: 1 MSKA-HSPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNISM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALEKV 76
>gi|402861349|ref|XP_003895059.1| PREDICTED: small nuclear ribonucleoprotein G-like [Papio anubis]
Length = 76
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 60/77 (77%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G L+GFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRRVQGILQGFDPFMNLVIDECVEMAISGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGN+++ +EALE V
Sbjct: 60 VVIRGNNIIMLEALERV 76
>gi|333449426|gb|AEF33399.1| small nuclear ribonucleoprotein polypeptide G protein
[Crassostrea ariakensis]
Length = 77
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 2/78 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYM+KK+ +KLN R I G LRGFD FMNLV+D + E E+N IGM
Sbjct: 1 MSKA-HPPELKKYMEKKINLKLNGGRQIQGILRGFDPFMNLVVDECIEETKLGERNQIGM 59
Query: 60 VVIRGNSVVTVEALEPVS 77
VV+RGNS++ +EAL+ +
Sbjct: 60 VVVRGNSIILLEALDRIG 77
>gi|268565649|ref|XP_002639509.1| C. briggsae CBR-SNR-7 protein [Caenorhabditis briggsae]
Length = 77
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIG 58
MS++ PP+LKKYMDK++++KLN NR + G LRGFD FMN+VID VE NGN N +G
Sbjct: 1 MSKT-HPPELKKYMDKEIELKLNGNRHVSGILRGFDPFMNMVIDEAVEYPKNGNSIN-LG 58
Query: 59 MVVIRGNSVVTVEALEPVS 77
M VIRGNSVV +E E VS
Sbjct: 59 MTVIRGNSVVIMEPKERVS 77
>gi|109465326|ref|XP_001075060.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD F NLVID VE V ++N+IG
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGTRRVQGILRGFDPFTNLVIDECVEMVTSGQQNNIGT 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +E LE V
Sbjct: 60 VVIRGNSIIMLETLERV 76
>gi|261198058|ref|XP_002625431.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239595394|gb|EEQ77975.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239607755|gb|EEQ84742.1| predicted protein [Ajellomyces dermatitidis ER-3]
gi|327354601|gb|EGE83458.1| small nuclear ribonucleoprotein SmG [Ajellomyces dermatitidis
ATCC 18188]
Length = 78
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K+L ++LN NR ++G LRG+D FMN+V+D VE NG EK +GMVVIRGNS
Sbjct: 6 PELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDEAVEEKNGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|355567875|gb|EHH24216.1| hypothetical protein EGK_07838 [Macaca mulatta]
Length = 76
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL KLN R + G LR FD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSSKLNGGRHVQGILRAFDPFMNLVIDEYVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVI+GNS++ +EALE V
Sbjct: 60 VVIQGNSIIMLEALERV 76
>gi|156085737|ref|XP_001610278.1| small nuclear ribonucleoprotein G [Babesia bovis T2Bo]
gi|154797530|gb|EDO06710.1| small nuclear ribonucleoprotein G, putative [Babesia bovis]
Length = 80
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 54/70 (77%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSV 67
PDL++YM+K+L + L +R +VG LRG+D FMN+V+DN +++ G+E+ +GMVVIRGN++
Sbjct: 9 PDLRRYMEKRLDVHLTGSRHVVGVLRGYDTFMNVVLDNALQIEGDEQTRLGMVVIRGNAI 68
Query: 68 VTVEALEPVS 77
V E L+ V
Sbjct: 69 VYWECLDKVH 78
>gi|402590109|gb|EJW84040.1| hypothetical protein WUBG_05049 [Wuchereria bancrofti]
Length = 79
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKKYMDK++ +KLN NR + G LRGFD FMN+V+++ VE + +KN+IGM
Sbjct: 1 MSKT-HPPELKKYMDKQVDLKLNGNRSVSGILRGFDPFMNIVVEDAVENLKSGDKNEIGM 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNS+V +E E
Sbjct: 60 VVIRGNSIVIMEPKE 74
>gi|109112083|ref|XP_001087555.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
Length = 76
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL KLN R + G L FD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSSKLNGGRHVQGILWAFDPFMNLVIDEYVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIIMLEALERV 76
>gi|119188491|ref|XP_001244852.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|320031840|gb|EFW13798.1| small nuclear ribonucleoprotein SmG [Coccidioides posadasii str.
Silveira]
gi|392867766|gb|EAS33463.2| small nuclear ribonucleoprotein SmG [Coccidioides immitis RS]
Length = 78
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K+L I++N NR ++G LRG+D FMN+V+D +E G EK +GMVVIRGNS
Sbjct: 6 PELKKYMEKRLLIQINGNRRVIGVLRGYDVFMNIVLDEAIEEKTGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE ++
Sbjct: 66 VVMLEALERIA 76
>gi|205829943|sp|A8MWD9.2|RUXGL_HUMAN RecName: Full=Small nuclear ribonucleoprotein G-like protein
Length = 76
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 4/78 (5%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIG 58
MS++ PP+LKK+ DKK +KLN R + G LRGFD FMNLVID VE+ +G +KN IG
Sbjct: 1 MSKA-HPPELKKFTDKKFSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQKN-IG 58
Query: 59 MVVIRGNSVVTVEALEPV 76
MV IRGNS++ +EALE V
Sbjct: 59 MVEIRGNSIIMLEALERV 76
>gi|339245769|ref|XP_003374518.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
gi|316972305|gb|EFV55988.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
Length = 76
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKKYMDKK+Q++LN +R I G LRGFD FMN+VID VE + E+ IGM
Sbjct: 1 MSKA-HPPELKKYMDKKMQLRLNGDRKISGVLRGFDPFMNMVIDEAVEHLKTGEQIMIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VV+RGNSV ++ LE V
Sbjct: 60 VVVRGNSVTLMQILERV 76
>gi|170576974|ref|XP_001893831.1| small nuclear ribonucleoprotein G [Brugia malayi]
gi|312077085|ref|XP_003141148.1| small nuclear ribonucleoprotein G [Loa loa]
gi|158599912|gb|EDP37330.1| small nuclear ribonucleoprotein G, putative [Brugia malayi]
gi|307763686|gb|EFO22920.1| small nuclear ribonucleoprotein G [Loa loa]
Length = 79
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKKYMDK++ +KLN NR + G LRGFD FMN+V+++ VE + +KN+IGM
Sbjct: 1 MSKT-HPPELKKYMDKQVDLKLNGNRSVSGILRGFDPFMNIVVEDAVENLKNGDKNEIGM 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNS+V +E E
Sbjct: 60 VVIRGNSIVIMEPKE 74
>gi|308810487|ref|XP_003082552.1| putative small nuclear ribonucleoprotein E (ISS) [Ostreococcus
tauri]
gi|116061021|emb|CAL56409.1| putative small nuclear ribonucleoprotein E (ISS) [Ostreococcus
tauri]
Length = 101
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 54/68 (79%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVE 71
+YMDKKL+++LN NR + G LRGFDQF+NLV+D++ EK +GMVV+RGNSVV++E
Sbjct: 29 RYMDKKLRLRLNGNRSVTGILRGFDQFLNLVLDDSTNDTTTEKTPMGMVVVRGNSVVSME 88
Query: 72 ALEPVSKS 79
ALE ++ +
Sbjct: 89 ALEYIAPA 96
>gi|154283627|ref|XP_001542609.1| small nuclear ribonucleoprotein SmG [Ajellomyces capsulatus NAm1]
gi|150410789|gb|EDN06177.1| small nuclear ribonucleoprotein SmG [Ajellomyces capsulatus NAm1]
gi|225561938|gb|EEH10218.1| hypothetical protein HCBG_01863 [Ajellomyces capsulatus G186AR]
gi|240275552|gb|EER39066.1| hypothetical protein HCDG_07010 [Ajellomyces capsulatus H143]
gi|325091383|gb|EGC44693.1| hypothetical protein HCEG_03908 [Ajellomyces capsulatus H88]
Length = 78
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K+L ++LN NR ++G LRG+D FMN+V+D VE +G EK +GMVVIRGNS
Sbjct: 6 PELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVMDEAVEEKSGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|281212625|gb|EFA86785.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 82
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRG 64
Q PDL K +DKK+ +KLN NR ++G LRGFD FMN+V+ +TVEV E+ ++GMVVIRG
Sbjct: 7 QDPDLTKLLDKKMNVKLNGNRTVIGILRGFDSFMNIVLKDTVEVTYPQEQINMGMVVIRG 66
Query: 65 NSVVTVEALEPVSKSQ 80
NS+V +E LE VS +
Sbjct: 67 NSIVMMEPLEAVSSKK 82
>gi|187610687|gb|ACD13592.1| small nuclear ribonucleoprotein polypeptide G [Penaeus monodon]
gi|408842889|gb|AFU93450.1| small nuclear ribonucleoprotein polypeptide G [Litopenaeus
vannamei]
Length = 77
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKKYMDK++ KLN R++ GTLRGFD FMNLV+D+ VEV ++ +G
Sbjct: 1 MSKA-HPPELKKYMDKRVMTKLNGGRVVEGTLRGFDPFMNLVVDDGVEVRRSGDRVRVGF 59
Query: 60 VVIRGNSVVTVEALEPVS 77
VVIRG+S++ +EAL+ +S
Sbjct: 60 VVIRGSSIIMLEALDRIS 77
>gi|303276466|ref|XP_003057527.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461879|gb|EEH59172.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 77
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 55/72 (76%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSV 67
P +YMDKKL++KLN NR +VG LRGFDQF+NLV+D V+ + ++K +GMVV+RGNS+
Sbjct: 1 PRSLRYMDKKLRLKLNGNRGVVGVLRGFDQFLNLVLDECVDDSTSDKEPLGMVVVRGNSI 60
Query: 68 VTVEALEPVSKS 79
+EALE + +
Sbjct: 61 SALEALEHIPAA 72
>gi|109048997|ref|XP_001112504.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
Length = 76
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIR 63
P+LKK+MDKKL +KLN R + G L+GFD FMNLVID VE+ ++N+IGMVVIR
Sbjct: 4 AHSPELKKFMDKKLSLKLNGGRHVQGILQGFDPFMNLVIDECVEMAISGQQNNIGMVVIR 63
Query: 64 GNSVVTVEALEPV 76
GN+++ +EALE V
Sbjct: 64 GNNIIMLEALERV 76
>gi|295665420|ref|XP_002793261.1| small nuclear ribonucleoprotein SmG [Paracoccidioides sp.
'lutzii' Pb01]
gi|226278175|gb|EEH33741.1| small nuclear ribonucleoprotein SmG [Paracoccidioides sp.
'lutzii' Pb01]
Length = 78
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K+L +++N NR ++G LRG+D FMN+V+D VE +G EK +GMVVIRGNS
Sbjct: 6 PELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVEEKSGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE V
Sbjct: 66 VVMLEALERVG 76
>gi|403372169|gb|EJY85976.1| Small nuclear ribonucleoprotein G, putative [Oxytricha trifallax]
Length = 709
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMV 60
S+ G DL+K+MD ++ ++LNANR + G L+G+DQF+N+V+DN +E +N +EK ++G +
Sbjct: 3 SKQGYGADLRKFMDLRVDLRLNANRHVAGVLKGYDQFLNIVLDNAIEIINKDEKRELGTI 62
Query: 61 VIRGNSVVTVEALEPVS 77
VIRGNSVV E L+ S
Sbjct: 63 VIRGNSVVMWENLDKYS 79
>gi|324514246|gb|ADY45805.1| Small nuclear ribonucleoprotein G [Ascaris suum]
Length = 79
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
MS++ PP+LKKYMDK + +KLN NR + G LRGFD FMN+V+++ VE + E N +GM
Sbjct: 1 MSKT-HPPELKKYMDKHMDLKLNGNRHVSGVLRGFDPFMNIVVEDAVEHLKNGESNTLGM 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNS+V +E E
Sbjct: 60 VVIRGNSIVIMEPKE 74
>gi|109077009|ref|XP_001097013.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
Length = 75
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 59/77 (76%), Gaps = 3/77 (3%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ P+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HSPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNS++ +EALE V
Sbjct: 60 VVIRGNSIM-LEALERV 75
>gi|70983548|ref|XP_747301.1| small nuclear ribonucleoprotein SmG [Aspergillus fumigatus Af293]
gi|66844927|gb|EAL85263.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus Af293]
gi|159123693|gb|EDP48812.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus A1163]
Length = 78
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K++ +LN NR ++G LRG+D FMN+V+D E G EK IGMVVIRGNS
Sbjct: 6 PELKKYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKQGGEKVAIGMVVIRGNS 65
Query: 67 VVTVEALEPVSK 78
VV +EALE +S+
Sbjct: 66 VVMLEALERISE 77
>gi|119484532|ref|XP_001262045.1| small nuclear ribonucleoprotein SmG, putative [Neosartorya
fischeri NRRL 181]
gi|121719811|ref|XP_001276604.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
clavatus NRRL 1]
gi|119404816|gb|EAW15178.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
clavatus NRRL 1]
gi|119410201|gb|EAW20148.1| small nuclear ribonucleoprotein SmG, putative [Neosartorya
fischeri NRRL 181]
Length = 78
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K++ +LN NR ++G LRG+D FMN+V+D E G EK IGMVVIRGNS
Sbjct: 6 PELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMVVIRGNS 65
Query: 67 VVTVEALEPVSK 78
VV +EALE +S+
Sbjct: 66 VVMLEALERISE 77
>gi|154300461|ref|XP_001550646.1| hypothetical protein BC1G_11054 [Botryotinia fuckeliana B05.10]
gi|347828363|emb|CCD44060.1| similar to small nuclear ribonucleoprotein g [Botryotinia
fuckeliana]
Length = 85
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ VE G EK IGMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKEGGEKVKIGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|440640051|gb|ELR09970.1| small nuclear ribonucleoprotein G [Geomyces destructans 20631-21]
Length = 83
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ VE +G EK IGMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGEKVRIGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|225679289|gb|EEH17573.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb03]
Length = 78
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K+L +++N NR ++G LRG+D FMN+V+D VE +G EK +GMVVIRGNS
Sbjct: 6 PELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVEEKSGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|403363323|gb|EJY81404.1| Small nuclear ribonucleoprotein polypeptide G [Oxytricha
trifallax]
Length = 79
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMV 60
S+ G DL+K+MD ++ ++LNANR + G L+G+DQF+N+V+DN +E +N +EK ++G +
Sbjct: 3 SKQGYGADLRKFMDLRVDLRLNANRHVAGVLKGYDQFLNIVLDNAIEIINKDEKRELGTI 62
Query: 61 VIRGNSVVTVEALEPV 76
VIRGNSVV E L+ V
Sbjct: 63 VIRGNSVVMWENLDKV 78
>gi|115491153|ref|XP_001210204.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197064|gb|EAU38764.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 78
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K++ +LN NR ++G LRG+D FMN+V+D E G EK IGMVVIRGNS
Sbjct: 6 PELKKYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKQGGEKVAIGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +S
Sbjct: 66 VVMLEALERIS 76
>gi|320591988|gb|EFX04427.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 86
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D VE +G EK IGMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKDGGEKVKIGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
+V +EALE +
Sbjct: 66 IVMLEALERIG 76
>gi|241594929|ref|XP_002404416.1| small nuclear ribonucleoprotein G, putative [Ixodes scapularis]
gi|215500409|gb|EEC09903.1| small nuclear ribonucleoprotein G, putative [Ixodes scapularis]
Length = 76
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNSVV 68
+YMDKKL ++LN +R+I G LRGFD FMNLV+D TV E G EK+DIGMVV+RGNS+V
Sbjct: 8 FSRYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGGEKHDIGMVVVRGNSIV 67
Query: 69 TVEA 72
+E+
Sbjct: 68 LLES 71
>gi|156040265|ref|XP_001587119.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980]
gi|154696205|gb|EDN95943.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 84
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ VE G EK IGMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKEGGEKVKIGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|342326346|gb|AEL23088.1| small nuclear ribonucleoprotein polypeptide G [Cherax
quadricarinatus]
Length = 77
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ PP+LKKYMDK++ KLN R++ GTLRGFD FMNLV+D+ VE ++ IG+
Sbjct: 1 MSKA-HPPELKKYMDKRVMTKLNGGRVVEGTLRGFDPFMNLVVDDGVEARKTGDRVRIGV 59
Query: 60 VVIRGNSVVTVEALEPVS 77
VVIRG+S++ +EAL+ +S
Sbjct: 60 VVIRGSSIIMLEALDRIS 77
>gi|238483149|ref|XP_002372813.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus flavus
NRRL3357]
gi|317139686|ref|XP_001817686.2| small nuclear ribonucleoprotein G [Aspergillus oryzae RIB40]
gi|220700863|gb|EED57201.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus flavus
NRRL3357]
Length = 78
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K++ +LN NR ++G LRG+D FMN+V+D E G EK IGMVVIRGNS
Sbjct: 6 PELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +S
Sbjct: 66 VVMLEALERIS 76
>gi|326427331|gb|EGD72901.1| small nuclear ribonucleoprotein G [Salpingoeca sp. ATCC 50818]
Length = 76
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRG 64
Q P+LK+++DKKL++KLNANR + G LRGFD FMN+V+D TVE + E+ IG+VVIRG
Sbjct: 5 QAPELKRFLDKKLELKLNANRKVSGILRGFDPFMNIVMDQTVEHKPDGEQVKIGVVVIRG 64
Query: 65 NSVVTVEALEPV 76
NS+ T++ LE +
Sbjct: 65 NSIATMKGLEAI 76
>gi|313217530|emb|CBY38609.1| unnamed protein product [Oikopleura dioica]
gi|313236587|emb|CBY19879.1| unnamed protein product [Oikopleura dioica]
Length = 76
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIR 63
PP+LKK+MD+K+ +K+N R + G LRGFD FMNLVID+ +E N + +GM VIR
Sbjct: 4 AHPPELKKFMDRKMSVKVNGGRKVEGVLRGFDPFMNLVIDDAIEYRKDNSSHTMGMCVIR 63
Query: 64 GNSVVTVEALEPV 76
GNSV+ +EA+E +
Sbjct: 64 GNSVLMIEAMERI 76
>gi|346971880|gb|EGY15332.1| hypothetical protein VDAG_06186 [Verticillium dahliae VdLs.17]
Length = 85
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D VE G EK IGMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGEKVRIGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|328853199|gb|EGG02339.1| hypothetical protein MELLADRAFT_75479 [Melampsora larici-populina
98AG31]
Length = 78
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN--GNEKNDIG 58
MS++ QP +LKKYMDK+L + L NR + G LRGFD F+NLV+D E N G EK +G
Sbjct: 1 MSKAAQP-ELKKYMDKRLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQEENLEGGEKRKMG 59
Query: 59 MVVIRGNSVVTVEALEPV 76
+VVIRGNSV ++E LE V
Sbjct: 60 LVVIRGNSVSSIETLEAV 77
>gi|67522076|ref|XP_659099.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|40744652|gb|EAA63808.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|259486817|tpe|CBF84982.1| TPA: small nuclear ribonucleoprotein SmG, putative
(AFU_orthologue; AFUA_8G04960) [Aspergillus nidulans
FGSC A4]
Length = 78
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNS 66
P+LKKYM+K++ +LN NR ++G LRG+D FMN+V+D E G EK IGM+VIRGNS
Sbjct: 6 PELKKYMEKRVFCELNGNRKVIGVLRGYDVFMNIVLDEAFEEKPGGEKVAIGMIVIRGNS 65
Query: 67 VVTVEALEPVSK 78
VV +EALE +S+
Sbjct: 66 VVMLEALERISE 77
>gi|361126108|gb|EHK98124.1| putative small nuclear ribonucleoprotein G [Glarea lozoyensis
74030]
Length = 85
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ VE +G EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALEPVSKSQ 80
VV +EALE + +
Sbjct: 66 VVMLEALERIGGGR 79
>gi|299117056|emb|CBN73827.1| small nuclear ribonucleoprotein polypeptide G [Ectocarpus
siliculosus]
Length = 75
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
M++ G PDLK+YMDK L +KLN NR + G LRG+D FMNLV+D T + ++K +GMV
Sbjct: 1 MAKGG--PDLKRYMDKTLSLKLNGNRTVKGVLRGYDPFMNLVLDETTDPASSDKK-MGMV 57
Query: 61 VIRGNSVVTVEALEPV 76
+IRGNSVV E L+P+
Sbjct: 58 IIRGNSVVQFEILDPL 73
>gi|302404042|ref|XP_002999859.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361361|gb|EEY23789.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 85
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN R ++G LRG+D F+N+V+D VE G EK IGMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGGRKVIGVLRGYDVFLNIVLDEAVEEKEGGEKVRIGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|317036310|ref|XP_001398084.2| small nuclear ribonucleoprotein G [Aspergillus niger CBS 513.88]
gi|358372686|dbj|GAA89288.1| small nuclear ribonucleoprotein SmG [Aspergillus kawachii IFO
4308]
Length = 78
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKYM+K++ +LN NR ++G LRG+D FMN+V+D E G EK IGM+VIRGNS
Sbjct: 6 PELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMIVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +S
Sbjct: 66 VVMLEALERIS 76
>gi|237830743|ref|XP_002364669.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
ME49]
gi|211962333|gb|EEA97528.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
ME49]
gi|221487756|gb|EEE25988.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
GT1]
gi|221507550|gb|EEE33154.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
VEG]
Length = 93
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 10/86 (11%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-------- 52
M ++G DL+++M+K+L + L+ R +VG LRG+D FMN+V++NTVEV GN
Sbjct: 5 MGKAGPAADLRRFMEKRLDVHLSGGRRVVGVLRGYDTFMNIVLENTVEVKGNPANSASSG 64
Query: 53 --EKNDIGMVVIRGNSVVTVEALEPV 76
E N+IG VV+RGNS++ E L+ V
Sbjct: 65 GTETNEIGFVVVRGNSILYWECLDKV 90
>gi|171694560|ref|XP_001912204.1| hypothetical protein [Podospora anserina S mat+]
gi|170947522|emb|CAP59683.1| unnamed protein product [Podospora anserina S mat+]
Length = 85
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 57/70 (81%), Gaps = 1/70 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ VE +G EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVMDDAVEEKDGGEKVKLGMVVIRGNS 65
Query: 67 VVTVEALEPV 76
VV +EALE +
Sbjct: 66 VVMLEALERI 75
>gi|391346676|ref|XP_003747595.1| PREDICTED: small nuclear ribonucleoprotein G-like [Metaseiulus
occidentalis]
Length = 76
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDK L ++LN +R++ G LRGFD FMN+V++ EV G ++ IGM
Sbjct: 1 MSKA-HPPELKKYMDKSLSLRLNGSRVVSGILRGFDPFMNIVLEEAFEEVKGGQRTPIGM 59
Query: 60 VVIRGNSVVTVEALE 74
VIRGNS+V +E E
Sbjct: 60 TVIRGNSIVLLETQE 74
>gi|380478035|emb|CCF43823.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 108
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D V E G EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALE 74
VV +EALE
Sbjct: 66 VVMLEALE 73
>gi|334349064|ref|XP_003342141.1| PREDICTED: small nuclear ribonucleoprotein G-like [Monodelphis
domestica]
Length = 76
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNS 66
P+LKK+MDKKL +KLN R I G LRG D FMNLV D VE+ G ++N+IGMVVI+GNS
Sbjct: 7 PELKKFMDKKLSLKLNGGRPIQGILRGSDLFMNLVADECVEMAPGGQQNNIGMVVIQGNS 66
Query: 67 VVTVEALEPV 76
++ +EALE V
Sbjct: 67 IIMLEALEQV 76
>gi|341882586|gb|EGT38521.1| hypothetical protein CAEBREN_25112 [Caenorhabditis brenneri]
gi|341895108|gb|EGT51043.1| hypothetical protein CAEBREN_10134 [Caenorhabditis brenneri]
Length = 77
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-DIGM 59
MS++ PP+LKKYMDK++ +KLN NR + G LRGFD FMN+VID VE + + ++GM
Sbjct: 1 MSKT-HPPELKKYMDKEMDLKLNGNRHVSGILRGFDPFMNMVIDEAVEYTKSGASVNLGM 59
Query: 60 VVIRGNSVVTVEALEPVS 77
VIRGNSVV +E E +S
Sbjct: 60 TVIRGNSVVIMEPKERIS 77
>gi|296421463|ref|XP_002840284.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636499|emb|CAZ84475.1| unnamed protein product [Tuber melanosporum]
Length = 76
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ +E +G EK IG VVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGILRGYDVFLNIVLDDAIEEKDGGEKVRIGTVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +S
Sbjct: 66 VVMLEALERIS 76
>gi|399217705|emb|CCF74592.1| unnamed protein product [Babesia microti strain RI]
Length = 79
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVV 61
++G DL+++M+K+L I LN +R IVG LRG+D FMN+V+DN +++ G+EK ++G VV
Sbjct: 3 GKTGPAVDLRRFMEKRLDIYLNGHRHIVGVLRGYDTFMNIVLDNALKI-GDEKEELGTVV 61
Query: 62 IRGNSVVTVEALEPVS 77
+RGNS+V E L+ V
Sbjct: 62 LRGNSIVCWECLDKVH 77
>gi|429327915|gb|AFZ79675.1| small nuclear ribonucleoprotein G, putative [Babesia equi]
Length = 81
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 55/71 (77%)
Query: 7 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNS 66
DL+++M+K+L + LN +R +VG LRG+D FMN+V+DN +EV G+++ D+G+VV+RGNS
Sbjct: 9 SADLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGDDQIDLGIVVLRGNS 68
Query: 67 VVTVEALEPVS 77
++ E L+ V
Sbjct: 69 IIYWECLDKVH 79
>gi|332253185|ref|XP_003275727.1| PREDICTED: small nuclear ribonucleoprotein G-like [Nomascus
leucogenys]
Length = 89
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMV 60
+ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMV
Sbjct: 14 TSKAHPPELKKFMDKKLSLKLNDGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV 73
Query: 61 VIRGNSVVTVEALEPV 76
I G+S++ +EAL+ V
Sbjct: 74 KILGDSIIVLEALKRV 89
>gi|367051545|ref|XP_003656151.1| hypothetical protein THITE_2120569 [Thielavia terrestris NRRL
8126]
gi|347003416|gb|AEO69815.1| hypothetical protein THITE_2120569 [Thielavia terrestris NRRL
8126]
Length = 83
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ VE N EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDNGEKAKLGMVVIRGNS 65
Query: 67 VVTVEALEPVSKSQ 80
VV +EALE + +
Sbjct: 66 VVMLEALERIGGDE 79
>gi|426195723|gb|EKV45652.1| hypothetical protein AGABI2DRAFT_72502 [Agaricus bisporus var.
bisporus H97]
Length = 78
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ QP +LKKYMDKKL + L R + GTLRG+D F+NLVID+ + E +K+ IG
Sbjct: 1 MSKASQP-ELKKYMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEETTPAQKHPIGQ 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV ++E LE +
Sbjct: 60 VVIRGNSVTSMETLEAI 76
>gi|403170432|ref|XP_003329769.2| small nuclear ribonucleoprotein G [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375168717|gb|EFP85350.2| small nuclear ribonucleoprotein G [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 78
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDIG 58
MS++ QP +LKKYMDK+L + L NR + G LRGFD F+NLV+D E + G EK +G
Sbjct: 1 MSKAAQP-ELKKYMDKRLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQEESLEGGEKRKMG 59
Query: 59 MVVIRGNSVVTVEALEPV 76
++VIRGNSV ++E LE V
Sbjct: 60 LIVIRGNSVSSIETLEAV 77
>gi|406865394|gb|EKD18436.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 83
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN R ++G LRG+D F+N+V+D+ VE +G EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGTRKVIGILRGYDVFLNIVLDDAVEEKDGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|66811318|ref|XP_639367.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74854860|sp|Q54RX0.1|RUXG_DICDI RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|60468000|gb|EAL66011.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 85
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNS 66
PDL K +DKKL IKLN NR + G LRGFD FMN+ + +TVE V+ EK +IGMV+IRGNS
Sbjct: 9 PDLTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVEVVSPTEKYEIGMVIIRGNS 68
Query: 67 VVTVEALEPVS 77
++ +E LE ++
Sbjct: 69 ILLMEPLESMA 79
>gi|378732523|gb|EHY58982.1| small nuclear ribonucleoprotein G [Exophiala dermatitidis
NIH/UT8656]
Length = 80
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNS 66
P+L+KYM+K+L ++LN NR ++G LRG+D F+N+V+D+ VE G E+ +GMV IRGNS
Sbjct: 6 PELRKYMEKRLFVQLNGNRKVIGVLRGYDVFLNIVLDDAVEEKAGGERERLGMVAIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE V
Sbjct: 66 VVMLEALERVG 76
>gi|340520043|gb|EGR50280.1| predicted protein [Trichoderma reesei QM6a]
gi|358387525|gb|EHK25119.1| hypothetical protein TRIVIDRAFT_32934 [Trichoderma virens Gv29-8]
Length = 83
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D VE +G EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKDGGEKIRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|401411851|ref|XP_003885373.1| hypothetical protein NCLIV_057680 [Neospora caninum Liverpool]
gi|325119792|emb|CBZ55345.1| hypothetical protein NCLIV_057680 [Neospora caninum Liverpool]
Length = 169
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 10/86 (11%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-------- 52
M ++G DL+++M+K+L + L+ R +VG LRG+D FMN+V++NTVEV GN
Sbjct: 5 MGKAGPAADLRRFMEKRLDVHLSGGRRVVGVLRGYDTFMNIVLENTVEVKGNPANPANSG 64
Query: 53 --EKNDIGMVVIRGNSVVTVEALEPV 76
E N+IG VV+RGNS++ E L+ V
Sbjct: 65 GTETNEIGFVVVRGNSILYWECLDKV 90
>gi|169860675|ref|XP_001836972.1| hypothetical protein CC1G_00108 [Coprinopsis cinerea
okayama7#130]
gi|116501694|gb|EAU84589.1| hypothetical protein CC1G_00108 [Coprinopsis cinerea
okayama7#130]
Length = 78
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ QP +LKK+MDKKL I L R + GTLRG+D F+NLVID+ V E +K+ IG
Sbjct: 1 MSKASQP-ELKKFMDKKLFIHLQGGRKVSGTLRGYDLFLNLVIDDAVEETTPGQKHPIGT 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV ++E LE +
Sbjct: 60 VVIRGNSVTSMETLEAI 76
>gi|346468165|gb|AEO33927.1| hypothetical protein [Amblyomma maculatum]
Length = 99
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%), Gaps = 24/100 (24%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ PP+LKKYMDKKL ++LN +R+I G LRGFD FMNLV+D TV E G EK++IGM
Sbjct: 1 MSKA-HPPELKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGGEKHNIGM 59
Query: 60 V----------------------VIRGNSVVTVEALEPVS 77
V V+RGNS+V +E+ + ++
Sbjct: 60 VVSSFDAPSCGFDCDHFFAFHLQVVRGNSIVLLESQDRIA 99
>gi|407929252|gb|EKG22086.1| hypothetical protein MPH_00541 [Macrophomina phaseolina MS6]
Length = 81
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D VE G EK IGM VIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKAGGEKVRIGMCVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|114577940|ref|XP_001142444.1| PREDICTED: small nuclear ribonucleoprotein G isoform 3 [Pan
troglodytes]
Length = 85
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 11 KKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVT 69
K++MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++
Sbjct: 19 KRFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 78
Query: 70 VEALEPV 76
+EALE V
Sbjct: 79 LEALERV 85
>gi|310798750|gb|EFQ33643.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 84
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D VE G EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|358390848|gb|EHK40253.1| hypothetical protein TRIATDRAFT_252624 [Trichoderma atroviride
IMI 206040]
Length = 83
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN R ++G LRG+D F+N+V+D VE +G EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGGRKVIGVLRGYDVFLNVVLDEAVEEKDGGEKIRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|354482503|ref|XP_003503437.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344245943|gb|EGW02047.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ P LKK+MDKKL +KLN R + G LRGF+ FMNLVID VE+ +N+IGM
Sbjct: 1 MSKA-HPSKLKKFMDKKLSLKLNGGRHVQGILRGFNPFMNLVIDECVEMATSGPQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVI+GNS + +EALE V
Sbjct: 60 VVIQGNSSIMLEALEKV 76
>gi|392568108|gb|EIW61282.1| like-Sm ribonucleo protein [Trametes versicolor FP-101664 SS1]
gi|395328913|gb|EJF61303.1| like-Sm ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
gi|449549694|gb|EMD40659.1| hypothetical protein CERSUDRAFT_111239 [Ceriporiopsis
subvermispora B]
Length = 77
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ QP +LKK+MDKKL + L R + GTLRG+D F+NLVID+ + E N +K+ IG
Sbjct: 1 MSKASQP-ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDALEETNPAQKHPIGT 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV ++E LE +
Sbjct: 60 VVIRGNSVTSMETLEAI 76
>gi|397521832|ref|XP_003830990.1| PREDICTED: small nuclear ribonucleoprotein G [Pan paniscus]
Length = 85
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 11 KKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVT 69
K++MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++
Sbjct: 19 KRFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM 78
Query: 70 VEALEPV 76
+EALE V
Sbjct: 79 LEALERV 85
>gi|85090916|ref|XP_958647.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336273960|ref|XP_003351734.1| hypothetical protein SMAC_00278 [Sordaria macrospora k-hell]
gi|28920025|gb|EAA29411.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336463997|gb|EGO52237.1| hypothetical protein NEUTE1DRAFT_90311 [Neurospora tetrasperma
FGSC 2508]
gi|350296078|gb|EGZ77055.1| LSM-domain-containing protein [Neurospora tetrasperma FGSC 2509]
gi|380096013|emb|CCC06060.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 85
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ VE +G EK +GMV IRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGEKVKLGMVTIRGNS 65
Query: 67 VVTVEALEPVSKSQ 80
VV +EALE + +
Sbjct: 66 VVMMEALERIGGDE 79
>gi|323448261|gb|EGB04162.1| hypothetical protein AURANDRAFT_32975 [Aureococcus
anophagefferens]
Length = 77
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGM 59
MSR+ PDLKKYMDK L IK+N NR + G LRG+DQF+NLV+++ E + K IGM
Sbjct: 1 MSRA-SGPDLKKYMDKALTIKMNGNRRVSGVLRGYDQFLNLVLEDATEDGSDGAKTPIGM 59
Query: 60 VVIRGNSVVTVEALEPVS 77
VV+RGN ++ +++LE +S
Sbjct: 60 VVLRGNGIIQLQSLERLS 77
>gi|226291004|gb|EEH46432.1| small nuclear ribonucleoprotein SmG [Paracoccidioides
brasiliensis Pb18]
Length = 79
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNS 66
P+LKKYM+K+L +++N NR ++G LRG+D FMN+V+D V E +G EK +GMVVIRGNS
Sbjct: 6 PELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVEEKSGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALEPVSKS 79
VV +E P +
Sbjct: 66 VVMLEVCSPCLRH 78
>gi|84994586|ref|XP_952015.1| small nuclear ribonucleoprotein [Theileria annulata strain
Ankara]
gi|65302176|emb|CAI74283.1| small nuclear ribonucleoprotein, putative [Theileria annulata]
Length = 82
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 57/76 (75%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVV 61
S+ DL+++M+K+L + LN +R +VG LRG+D FMN+V+DN +EV G E+ D+G+VV
Sbjct: 5 SKPSGNADLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGEEQVDLGVVV 64
Query: 62 IRGNSVVTVEALEPVS 77
+RGNS++ E L+ V+
Sbjct: 65 VRGNSILYWECLDRVN 80
>gi|410053341|ref|XP_003953440.1| PREDICTED: LOW QUALITY PROTEIN: small nuclear ribonucleoprotein
G-like protein-like [Pan troglodytes]
Length = 74
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ P +LKK+MDKK +KLN R + G LRGFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPLELKKFMDKKFSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALE 74
V I GNS++ +EALE
Sbjct: 60 VEIXGNSIIMLEALE 74
>gi|17510511|ref|NP_491032.1| Protein SNR-7 [Caenorhabditis elegans]
gi|29428018|sp|Q9N4G9.1|RUXG_CAEEL RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|12276019|gb|AAG50222.1|AF303264_1 SM protein G [Caenorhabditis elegans]
gi|351062434|emb|CCD70411.1| Protein SNR-7 [Caenorhabditis elegans]
Length = 77
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%), Gaps = 2/78 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-DIGM 59
MS++ PP+LKKYMDK++ +KLN NR + G LRGFD FMN+VID VE + + ++GM
Sbjct: 1 MSKT-HPPELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGGSVNLGM 59
Query: 60 VVIRGNSVVTVEALEPVS 77
VIRGNSVV +E E +S
Sbjct: 60 TVIRGNSVVIMEPKERIS 77
>gi|46107748|ref|XP_380933.1| hypothetical protein FG00757.1 [Gibberella zeae PH-1]
gi|408399451|gb|EKJ78553.1| hypothetical protein FPSE_01277 [Fusarium pseudograminearum
CS3096]
Length = 84
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D VE N EK IGMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKDNGEKVRIGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|308505206|ref|XP_003114786.1| CRE-SNR-7 protein [Caenorhabditis remanei]
gi|308258968|gb|EFP02921.1| CRE-SNR-7 protein [Caenorhabditis remanei]
Length = 77
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIG 58
MS++ PP+LKKYMDK++ +KLN NR + G LRGFD FMN+VID VE +G N +G
Sbjct: 1 MSKT-HPPELKKYMDKEMDLKLNGNRQVSGILRGFDPFMNMVIDEAVEYPKSGTPIN-LG 58
Query: 59 MVVIRGNSVVTVEALEPVS 77
M VIRGNSVV +E E +S
Sbjct: 59 MTVIRGNSVVIMEPKERIS 77
>gi|212541212|ref|XP_002150761.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
marneffei ATCC 18224]
gi|210068060|gb|EEA22152.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
marneffei ATCC 18224]
Length = 77
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND-IGMVVIRGNS 66
P+LKKYM+K+L ++LN NR ++G LRG+D FMN+V+D+ VE + D +GMVVIRGNS
Sbjct: 6 PELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDDAVEEKADGGKDRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|367030948|ref|XP_003664757.1| hypothetical protein MYCTH_2119714 [Myceliophthora thermophila
ATCC 42464]
gi|347012028|gb|AEO59512.1| hypothetical protein MYCTH_2119714 [Myceliophthora thermophila
ATCC 42464]
Length = 83
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ VE N EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDNGEKVKLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|145353525|ref|XP_001421061.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581297|gb|ABO99354.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 72
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 54/66 (81%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEAL 73
MDKKL+++LN NR +VGTLRGFDQF+N+V+D+ +EK +GM+V+RGNSVV++EAL
Sbjct: 1 MDKKLRLRLNGNRNVVGTLRGFDQFLNVVLDDATNDTTSEKTPMGMIVVRGNSVVSMEAL 60
Query: 74 EPVSKS 79
E ++ +
Sbjct: 61 EHIAPA 66
>gi|109458413|ref|XP_001063547.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392337649|ref|XP_003753311.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIR 63
G PP+ +K MD KL +KL+ R + G LRGFD FMNLV+D VE+ N ++N+ G+VVIR
Sbjct: 4 GHPPERRKVMDGKLSLKLDGGRRVRGVLRGFDPFMNLVVDECVEMGNSGQQNNSGVVVIR 63
Query: 64 GNSVVTVEALE 74
GNS+V +EALE
Sbjct: 64 GNSIVMLEALE 74
>gi|241951220|ref|XP_002418332.1| small nuclear ribonucleoprotein G (snRNP-G), putative [Candida
dubliniensis CD36]
gi|223641671|emb|CAX43632.1| small nuclear ribonucleoprotein G (snRNP-G), putative [Candida
dubliniensis CD36]
Length = 74
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG-NEKNDIGMVVIRGNS 66
P+LK YMDKKL I+LN +R I+G LRG+D F+N+ + + +EV+ EK +IG VIRGNS
Sbjct: 5 PELKSYMDKKLSIQLNGSRKIIGILRGYDIFLNITLTDALEVDSKGEKMNIGATVIRGNS 64
Query: 67 VVTVEALEPV 76
+V++EALE +
Sbjct: 65 IVSIEALESI 74
>gi|430813244|emb|CCJ29390.1| unnamed protein product [Pneumocystis jirovecii]
Length = 76
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRG 64
P+LKKYMDKK+ + LN +R ++G LRG+D F+N+V+D E G EK IG VVIRG
Sbjct: 5 STPELKKYMDKKVFLMLNGSRKVIGVLRGYDVFLNIVLDEAFEEKEGGEKCAIGTVVIRG 64
Query: 65 NSVVTVEALEPV 76
NSVV VEALE +
Sbjct: 65 NSVVMVEALERI 76
>gi|345566656|gb|EGX49598.1| hypothetical protein AOL_s00078g87 [Arthrobotrys oligospora ATCC
24927]
Length = 75
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 54/70 (77%), Gaps = 1/70 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNS 66
P+LKKY++K+L ++LN +R I+G LRG+D F+NL +D+ +E G EK IG VVIRGNS
Sbjct: 6 PELKKYLEKRLFVQLNGSRKIIGVLRGYDIFLNLCMDDCIEEKAGGEKERIGTVVIRGNS 65
Query: 67 VVTVEALEPV 76
VV +EALE +
Sbjct: 66 VVMLEALERI 75
>gi|323454582|gb|EGB10452.1| hypothetical protein AURANDRAFT_9439, partial [Aureococcus
anophagefferens]
Length = 62
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 4 SGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVI 62
SG+ PDLK+YM+K+L IK A R +VGTLRG+DQFMNLV+++ +E V+ EKN+IG VVI
Sbjct: 1 SGKGPDLKRYMEKRLLIKARARRKLVGTLRGYDQFMNLVVEDAIEQVSLTEKNEIGTVVI 60
Query: 63 RG 64
RG
Sbjct: 61 RG 62
>gi|148666746|gb|EDK99162.1| mCG130514, isoform CRA_b [Mus musculus]
Length = 99
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTV 70
++MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++ +
Sbjct: 34 RFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIML 93
Query: 71 EALEPV 76
EALE V
Sbjct: 94 EALERV 99
>gi|327291504|ref|XP_003230461.1| PREDICTED: small nuclear ribonucleoprotein G-like, partial
[Anolis carolinensis]
Length = 65
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Query: 13 YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNSVVTVE 71
+MDKKL +KLN R + G LRGFD FMNLVID VE+ G ++N+IGMVVIRGNS++ +E
Sbjct: 1 FMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMAPGGQQNNIGMVVIRGNSIIMLE 60
Query: 72 ALEPV 76
ALE V
Sbjct: 61 ALERV 65
>gi|116182940|ref|XP_001221319.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186395|gb|EAQ93863.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 83
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ VE N EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVLGVLRGYDVFLNIVLDDAVEEKDNGEKVKLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|225710716|gb|ACO11204.1| Small nuclear ribonucleoprotein G [Caligus rogercresseyi]
Length = 79
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMV 60
S PP+LKK+MDK++Q+KLNA+R + G LRG+D FMNLV++ +E +N +G V
Sbjct: 3 STKAHPPELKKFMDKRVQLKLNASRNMEGILRGYDPFMNLVLEEGIETTKQGHRNPVGTV 62
Query: 61 VIRGNSVVTVEA 72
VIRGNS+V +EA
Sbjct: 63 VIRGNSIVMLEA 74
>gi|170106101|ref|XP_001884262.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640608|gb|EDR04872.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 78
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ QP +LKK+MDKKL + L R + GTLRG+D F+NLVID+ + E +K+ IG
Sbjct: 1 MSKASQP-ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEETTPAQKHPIGT 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNSV ++E LE
Sbjct: 60 VVIRGNSVTSMETLE 74
>gi|149744765|ref|XP_001500582.1| PREDICTED: small nuclear ribonucleoprotein G-like [Equus
caballus]
Length = 76
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 54/73 (73%), Gaps = 1/73 (1%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIR 63
QPP+LKK+MDKKL +KL+ R + G L GFD F+NLVID VE+ ++N+IGMVVI+
Sbjct: 4 AQPPELKKFMDKKLSLKLHGGRHVQGILWGFDPFVNLVIDECVEMTTSGQQNNIGMVVIQ 63
Query: 64 GNSVVTVEALEPV 76
N ++ +EALE V
Sbjct: 64 RNGIIMLEALERV 76
>gi|242799446|ref|XP_002483380.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716725|gb|EED16146.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
stipitatus ATCC 10500]
Length = 77
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND-IGMVVIRGNS 66
P+LKKYM+K+L ++LN NR ++G LRG+D FMN+V+D+ VE + D +GMVVIRGNS
Sbjct: 6 PELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDDAVEEKPDGGKDRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EALE +
Sbjct: 66 VVMLEALERIG 76
>gi|389746943|gb|EIM88122.1| like-Sm ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 77
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ QP +LKK+MDKKL + L R + GTLRG+D F+NLVID+ + E +K+ IG
Sbjct: 1 MSKASQP-ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIEETTPAQKHPIGT 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNSV ++E LE
Sbjct: 60 VVIRGNSVTSMETLE 74
>gi|302694279|ref|XP_003036818.1| hypothetical protein SCHCODRAFT_47419 [Schizophyllum commune
H4-8]
gi|300110515|gb|EFJ01916.1| hypothetical protein SCHCODRAFT_47419 [Schizophyllum commune
H4-8]
Length = 77
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ QP +LKK+MDKKL + L R + GTLRG+D F+NLVID + E +K+ IG
Sbjct: 1 MSKASQP-ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDEALEETTPGQKHPIGT 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV ++E LE +
Sbjct: 60 VVIRGNSVTSMETLEAI 76
>gi|301097686|ref|XP_002897937.1| small nuclear ribonucleoprotein G [Phytophthora infestans T30-4]
gi|262106382|gb|EEY64434.1| small nuclear ribonucleoprotein G [Phytophthora infestans T30-4]
gi|348673260|gb|EGZ13079.1| hypothetical protein PHYSODRAFT_514215 [Phytophthora sojae]
Length = 64
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNSVVTVEA 72
MDK+L +KLN NR + G LRGFDQFMN+ +D TV EV+ E N IGMVVIRGNS+V E
Sbjct: 1 MDKRLSLKLNGNRKVSGVLRGFDQFMNVTLDETVEEVSATESNRIGMVVIRGNSIVQFEC 60
Query: 73 LEPV 76
LE +
Sbjct: 61 LERI 64
>gi|336373417|gb|EGO01755.1| hypothetical protein SERLA73DRAFT_177234 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386246|gb|EGO27392.1| hypothetical protein SERLADRAFT_460722 [Serpula lacrymans var.
lacrymans S7.9]
Length = 77
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ QP +LKK+MDKKL + L R + GTLRG+D F+NLVID+ + E +K+ IG
Sbjct: 1 MSKASQP-ELKKFMDKKLFVHLQGGRRVSGTLRGYDLFLNLVIDDALEETTPAQKHPIGT 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV ++E LE V
Sbjct: 60 VVIRGNSVTSMEILEAV 76
>gi|225711834|gb|ACO11763.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|225714162|gb|ACO12927.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|290562395|gb|ADD38594.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
Length = 79
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMV 60
S PP+LKK+MDK++Q+KLNA+R + G LRG+D FMNLV++ +E +N +G +
Sbjct: 3 STKAHPPELKKFMDKRVQLKLNASRNMEGILRGYDPFMNLVLEEGIETTKQGHRNPVGTI 62
Query: 61 VIRGNSVVTVEA 72
VIRGNS+V +EA
Sbjct: 63 VIRGNSIVMLEA 74
>gi|412986570|emb|CCO14996.1| predicted protein [Bathycoccus prasinos]
Length = 72
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 52/67 (77%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEAL 73
MDKKL++KLN NR ++G LRGFDQF+NLV+D V + EK +GMVV+RG SV+++EAL
Sbjct: 1 MDKKLKLKLNGNRGVIGILRGFDQFLNLVLDECVNDSTAEKTPLGMVVVRGASVLSMEAL 60
Query: 74 EPVSKSQ 80
E ++ Q
Sbjct: 61 EHIAPVQ 67
>gi|344250803|gb|EGW06907.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 82
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTV 70
++MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++ +
Sbjct: 17 RFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIML 76
Query: 71 EALEPV 76
EALE V
Sbjct: 77 EALERV 82
>gi|296484107|tpg|DAA26222.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 75
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIR 63
PP LK MDKK+ +KLN R + G L+GFD FMNLVID VE+ ++N+IGMVVIR
Sbjct: 4 AHPPKLKS-MDKKVSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNNIGMVVIR 62
Query: 64 GNSVVTVEALEPV 76
GNS++ +EALE V
Sbjct: 63 GNSIIMLEALEQV 75
>gi|400602043|gb|EJP69668.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 83
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ E G K +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAFEETEGGNKTRLGMVVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EA+E +
Sbjct: 66 VVMLEAMERIG 76
>gi|390601213|gb|EIN10607.1| like-Sm ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 77
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 56/77 (72%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ QP +LKK+MDKKL + L R + GTLRG+D F+NLVID+ + E +K+ +G
Sbjct: 1 MSKASQP-ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDALEETTPAQKHPLGT 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV ++E LE +
Sbjct: 60 VVIRGNSVTSMETLEAI 76
>gi|452842262|gb|EME44198.1| hypothetical protein DOTSEDRAFT_71875 [Dothistroma septosporum
NZE10]
Length = 85
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNS 66
P+LKKY+DK+++++LN +R ++GTLRG+D F+N+V+D E N EK +GM VIRGNS
Sbjct: 6 PELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNGEKARLGMCVIRGNS 65
Query: 67 VVTVEALEPV 76
VV +EAL+ +
Sbjct: 66 VVMMEALDRI 75
>gi|410730333|ref|XP_003671346.2| hypothetical protein NDAI_0G03260 [Naumovozyma dairenensis CBS
421]
gi|401780164|emb|CCD26103.2| hypothetical protein NDAI_0G03260 [Naumovozyma dairenensis CBS
421]
Length = 76
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGM-VVIRGN 65
P+LKKYMDKK+ I+LN +R I G LRG+D F+N+VID+ VEV+ + K+ +G+ VIRGN
Sbjct: 5 PELKKYMDKKILIQLNGSRKIAGILRGYDIFLNVVIDDAVEVSADGSKHQLGIQTVIRGN 64
Query: 66 SVVTVEALEPVS 77
S+V +EAL+ ++
Sbjct: 65 SIVALEALDTIA 76
>gi|330827552|ref|XP_003291838.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
gi|325077961|gb|EGC31640.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
Length = 78
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNS 66
PDL + +DKKL +KLN NR + G LRGFD FMN+ + +TVE V+ EK +IGMV+IRGNS
Sbjct: 9 PDLTRLLDKKLNVKLNGNRTVQGILRGFDTFMNIALKDTVEVVSPTEKYEIGMVLIRGNS 68
Query: 67 VVTVEALE 74
++ +E LE
Sbjct: 69 IILMEPLE 76
>gi|392577844|gb|EIW70972.1| hypothetical protein TREMEDRAFT_67521 [Tremella mesenterica DSM
1558]
Length = 78
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MSR+ QP +LKK+MD+KL + L R + G LRG+D F+NLV+DN E+ G ++ IG
Sbjct: 1 MSRASQP-ELKKFMDRKLYLHLQGGRAVSGILRGYDMFLNLVVDNAFEELGGGKRRLIGT 59
Query: 60 VVIRGNSVVTVEALEPVSK 78
VIRGNSV ++E L+P+ +
Sbjct: 60 TVIRGNSVSSMELLDPMRQ 78
>gi|303276468|ref|XP_003057528.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461880|gb|EEH59173.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 71
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 52/66 (78%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEAL 73
MDKKL++KLN NR ++G LRGFDQF+NLV+D V+ + ++K +GMVV+RGNS+ +EAL
Sbjct: 1 MDKKLRLKLNGNRGVLGVLRGFDQFLNLVLDECVDDSTSDKEPLGMVVVRGNSISALEAL 60
Query: 74 EPVSKS 79
E + +
Sbjct: 61 EHIPAA 66
>gi|402226213|gb|EJU06273.1| like-Sm ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 77
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE-KNDIGM 59
MSR+ QP +LKK+MDK+L + + R + G LRG+D F+NLV+D+ VE +G K IG
Sbjct: 1 MSRASQP-ELKKFMDKRLFVYIQGGRRVSGVLRGYDIFLNLVVDDAVEESGTSGKKHIGQ 59
Query: 60 VVIRGNSVVTVEALEPV 76
VVIRGNSV ++E LE +
Sbjct: 60 VVIRGNSVTSMEVLEAI 76
>gi|366991963|ref|XP_003675747.1| hypothetical protein NCAS_0C03930 [Naumovozyma castellii CBS
4309]
gi|342301612|emb|CCC69383.1| hypothetical protein NCAS_0C03930 [Naumovozyma castellii CBS
4309]
Length = 76
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 58/72 (80%), Gaps = 2/72 (2%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGM-VVIRGN 65
P+LKKYMDKK+ ++LN +R + G LRG+D F+N+V+D+ VEV+ + K+ +GM VIRGN
Sbjct: 5 PELKKYMDKKILLQLNGSRKVAGILRGYDIFLNVVVDDAVEVSKDGSKHQLGMQTVIRGN 64
Query: 66 SVVTVEALEPVS 77
S+V++EAL+ +S
Sbjct: 65 SIVSLEALDTIS 76
>gi|198427430|ref|XP_002130422.1| PREDICTED: similar to small nuclear ribonucleoprotein G [Ciona
intestinalis]
Length = 89
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 58/80 (72%), Gaps = 8/80 (10%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN----D 56
MS++ PP+LKK+MDKKL +KLN R I G LRGFD FMNLVID+ + G K+
Sbjct: 14 MSKA-HPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGI---GKRKDGSVEK 69
Query: 57 IGMVVIRGNSVVTVEALEPV 76
IGMVV+RGNSV+ +EA++ +
Sbjct: 70 IGMVVVRGNSVLMMEAVDRI 89
>gi|452979544|gb|EME79306.1| hypothetical protein MYCFIDRAFT_71922 [Pseudocercospora fijiensis
CIRAD86]
Length = 84
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNS 66
P+LKKY+DK+++++LN +R ++GTLRG+D F+N+V+D E NEK +GM VIRGNS
Sbjct: 6 PELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNNEKVRLGMCVIRGNS 65
Query: 67 VVTVEALEPVSKSQ 80
VV +EAL+ +
Sbjct: 66 VVMMEALDRIDSDH 79
>gi|453085821|gb|EMF13864.1| LSM-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 84
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNS 66
P+LKKY+DK+++++LN +R ++GTLRG+D F+N+V+D E N EK +GM VIRGNS
Sbjct: 6 PELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNGEKVRLGMCVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EAL+ +
Sbjct: 66 VVMLEALDRIG 76
>gi|402083491|gb|EJT78509.1| sm snRNP core protein Smg1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 86
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNS 66
P+LKKY+DKK+ ++LN +R +VG +RG+D F+N+V+D E +G EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKKVFVQLNGSRKVVGVVRGYDVFLNIVLDEAFEDKDGGEKVKLGMVVIRGNS 65
Query: 67 VVTVEALEPV 76
VV +EA+E +
Sbjct: 66 VVMLEAMERI 75
>gi|449299266|gb|EMC95280.1| hypothetical protein BAUCODRAFT_577920 [Baudoinia compniacensis
UAMH 10762]
Length = 83
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNS 66
P+LKKY+DK+++++LN +R ++GTLRG+D F+N+V+D E NEK +GM VIRGNS
Sbjct: 6 PELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNNEKVRLGMCVIRGNS 65
Query: 67 VVTVEALEPVS 77
VV +EAL+ +
Sbjct: 66 VVMMEALDRIG 76
>gi|398397857|ref|XP_003852386.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
gi|339472267|gb|EGP87362.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
Length = 93
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNS 66
P+LKKY+DK+++++LN +R ++GTLRG+D F+N+V+D E N EK +GM VIRGNS
Sbjct: 6 PELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNAEKVRLGMCVIRGNS 65
Query: 67 VVTVEAL 73
VV +EAL
Sbjct: 66 VVMMEAL 72
>gi|260786161|ref|XP_002588127.1| hypothetical protein BRAFLDRAFT_124953 [Branchiostoma floridae]
gi|229273285|gb|EEN44138.1| hypothetical protein BRAFLDRAFT_124953 [Branchiostoma floridae]
Length = 874
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/58 (63%), Positives = 46/58 (79%)
Query: 19 QIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPV 76
+++LN NR + G LRGFD FMNLVID VE+ GNE+ IGMVVIRGNS++ +EALE V
Sbjct: 816 EVQLNGNRKVSGILRGFDPFMNLVIDECVELRGNERQSIGMVVIRGNSIIMLEALERV 873
>gi|195642632|gb|ACG40784.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 66
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%), Gaps = 3/66 (4%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQF---MNLVIDNTVEVNGNEKNDI 57
MSRSGQPPDLKKYMDKKLQIK+NANR+++GTLRGFDQ L+ T V N KN +
Sbjct: 1 MSRSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQAGSRQALLSAPTNHVECNPKNVL 60
Query: 58 GMVVIR 63
M+V +
Sbjct: 61 IMIVAK 66
>gi|403222297|dbj|BAM40429.1| small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 82
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 55/76 (72%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVV 61
S+ DL+++M+K+L + LN +R +VG LRG+D FMN+V+DN +EV G + ++G+VV
Sbjct: 5 SKPSGNADLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGEGQVELGVVV 64
Query: 62 IRGNSVVTVEALEPVS 77
+RGNS++ E L+ V
Sbjct: 65 VRGNSILYWECLDKVH 80
>gi|326522308|dbj|BAK07616.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 70
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/44 (81%), Positives = 42/44 (95%)
Query: 18 LQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVV 61
L +KLNANR+++GTLRGFDQFMNLV+DNTVEVNG+EK DIGMVV
Sbjct: 12 LPVKLNANRVVIGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMVV 55
>gi|340897533|gb|EGS17123.1| putative small nuclear ribonucleoprotein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 82
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ VE N EK +GMV IRGNS
Sbjct: 6 PELKKYLDKRLFVELNGSRRVIGVLRGYDVFLNIVLDDAVEERPNGEKVKLGMVTIRGNS 65
Query: 67 VVTVEALE 74
VV +E LE
Sbjct: 66 VVILEPLE 73
>gi|405122533|gb|AFR97299.1| hypothetical protein CNAG_04914 [Cryptococcus neoformans var.
grubii H99]
Length = 78
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MSR+ QP +LKK+MD++L + L R I G LRG+D F+NLV+DN E+ G ++ GM
Sbjct: 1 MSRASQP-ELKKFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDNAFEELGGGQRKPCGM 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNSV +E L+
Sbjct: 60 VVIRGNSVSAMELLD 74
>gi|189203891|ref|XP_001938281.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330924593|ref|XP_003300696.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
gi|187985380|gb|EDU50868.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325030|gb|EFQ91212.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
Length = 84
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNS 66
P+LKKY++K++ ++LN +R ++G LRG+D ++N+V+D+ + EV G EK IGMVVIRGN+
Sbjct: 6 PELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDDALEEVAGGEKVRIGMVVIRGNA 65
Query: 67 VVTVEALEPVSK 78
VV +EAL+ +++
Sbjct: 66 VVMLEALDRINQ 77
>gi|256077883|ref|XP_002575229.1| small nuclear ribonucleoprotein G (snrnp-G) [Schistosoma mansoni]
gi|353231785|emb|CCD79140.1| putative small nuclear ribonucleoprotein G (snrnp-G) [Schistosoma
mansoni]
Length = 76
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIG 58
MS++ QP +LKKY+DK+L++KLNANR +VG LRGFD FMN+V+ + EV +GN+ I
Sbjct: 1 MSKAHQP-ELKKYLDKRLRLKLNANREVVGVLRGFDAFMNIVVSDAYEVTKDGNQIK-ID 58
Query: 59 MVVIRGNSVVTVEALEPV 76
M V+RGNS+ VE ++ +
Sbjct: 59 MAVVRGNSINIVEGVDRI 76
>gi|393215720|gb|EJD01211.1| like-Sm ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 77
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ QP +LKK+MDKKL + L R + GTLRGFD F+NLV+D+ + E +K+ IG
Sbjct: 1 MSKASQP-ELKKFMDKKLFVHLQGGRKVSGTLRGFDIFLNLVLDDAIEETTPAQKSPIGN 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNSV +E LE
Sbjct: 60 VVIRGNSVTLMETLE 74
>gi|71296893|gb|AAH35103.1| SNRPG protein [Homo sapiens]
gi|74177547|dbj|BAE43250.1| unnamed protein product [Mus musculus]
gi|149036609|gb|EDL91227.1| rCG56468, isoform CRA_a [Rattus norvegicus]
gi|149036612|gb|EDL91230.1| rCG56468, isoform CRA_a [Rattus norvegicus]
gi|149036613|gb|EDL91231.1| rCG56468, isoform CRA_a [Rattus norvegicus]
Length = 64
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEA 72
MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++ +EA
Sbjct: 1 MDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEA 60
Query: 73 LEPV 76
LE V
Sbjct: 61 LERV 64
>gi|291001751|ref|XP_002683442.1| predicted protein [Naegleria gruberi]
gi|284097071|gb|EFC50698.1| predicted protein [Naegleria gruberi]
Length = 89
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 8/88 (9%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV--------EVNGN 52
M +S Q P+LK YM+K+L +K+N R + GT+ GFD FMN+ ++N E N N
Sbjct: 1 MVQSNQYPELKVYMNKRLSVKMNGKRHVEGTMIGFDPFMNITLENAYDLTGFSKGEANTN 60
Query: 53 EKNDIGMVVIRGNSVVTVEALEPVSKSQ 80
EK +G VV+RGNS+ +E L+PV Q
Sbjct: 61 EKTHLGTVVVRGNSIEMMECLDPVYFRQ 88
>gi|296806239|ref|XP_002843929.1| small nuclear ribonucleoprotein SmG [Arthroderma otae CBS 113480]
gi|238845231|gb|EEQ34893.1| small nuclear ribonucleoprotein SmG [Arthroderma otae CBS 113480]
Length = 99
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 22/92 (23%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFD---------------------QFMNLVIDNT 46
P+LKKYM+K+L ++LN NR ++G LRG+D FMN+V+D+
Sbjct: 6 PELKKYMEKRLFVQLNGNRKVIGLLRGYDVRCSQYPIARRGCVMSLTLEQVFMNIVLDDA 65
Query: 47 VEV-NGNEKNDIGMVVIRGNSVVTVEALEPVS 77
VE NG EK +GMVVIRGNSVV +EALE +S
Sbjct: 66 VEEKNGGEKVPLGMVVIRGNSVVMLEALERIS 97
>gi|409049871|gb|EKM59348.1| hypothetical protein PHACADRAFT_169890 [Phanerochaete carnosa
HHB-10118-sp]
Length = 77
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS++ QP +LKK+MDKKL + L R + G LRG+D F+NLV+D+ + E +K+ IG
Sbjct: 1 MSKASQP-ELKKFMDKKLFVHLQGGRKVSGVLRGYDLFLNLVLDDALEETTPAQKHPIGT 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNSV ++E LE
Sbjct: 60 VVIRGNSVTSMETLE 74
>gi|392592906|gb|EIW82232.1| like-Sm ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 77
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG-NEKNDIGM 59
MS++ QP +LKK+MDKKL + L R + G LRG+D F+NLVID+ +E + +K+ IG
Sbjct: 1 MSKASQP-ELKKFMDKKLFVHLQGGRKVSGILRGYDLFLNLVIDDALEESSPAQKHPIGT 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNSV ++E LE
Sbjct: 60 VVIRGNSVTSMEILE 74
>gi|444322267|ref|XP_004181789.1| hypothetical protein TBLA_0G03330 [Tetrapisispora blattae CBS
6284]
gi|387514834|emb|CCH62270.1| hypothetical protein TBLA_0G03330 [Tetrapisispora blattae CBS
6284]
Length = 76
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 59/71 (83%), Gaps = 2/71 (2%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE-KNDIGM-VVIRGN 65
P+LKKY+++K+ +KLN NR ++G LRG+D F+N+VI+N +EV+ ++ +N +G VIRGN
Sbjct: 5 PELKKYVNRKILLKLNNNRTVIGELRGYDIFLNVVIENGIEVSKDKNENALGAQSVIRGN 64
Query: 66 SVVTVEALEPV 76
S+V++EALEP+
Sbjct: 65 SIVSIEALEPI 75
>gi|320164748|gb|EFW41647.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 77
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNS 66
P+LKK++D+++ +KLN NR + G LRGFD FMN+V+D T EV+ +E+++IGMV IRGNS
Sbjct: 7 PELKKFLDRRVILKLNGNRKVSGILRGFDPFMNVVLDETFEEVSESERHEIGMVAIRGNS 66
Query: 67 VVTVEALE 74
+ VE ++
Sbjct: 67 INMVETVD 74
>gi|134116118|ref|XP_773230.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255852|gb|EAL18583.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 78
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MSR+ QP +LKK+MD++L + L R I G LRG+D F+NLV+D+ E+ G ++ GM
Sbjct: 1 MSRASQP-ELKKFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDSAFEELGGGQRKPCGM 59
Query: 60 VVIRGNSVVTVEALE 74
VVIRGNSV +E L+
Sbjct: 60 VVIRGNSVSAMELLD 74
>gi|389631277|ref|XP_003713291.1| sm snRNP core protein Smg1 [Magnaporthe oryzae 70-15]
gi|351645624|gb|EHA53484.1| sm snRNP core protein Smg1 [Magnaporthe oryzae 70-15]
gi|440466674|gb|ELQ35928.1| sm snRNP core protein Smg1 [Magnaporthe oryzae Y34]
gi|440476979|gb|ELQ58129.1| sm snRNP core protein Smg1 [Magnaporthe oryzae P131]
Length = 88
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 5 GQP-PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVI 62
G P P+LKKY+DKK+ ++LN +R +VG +RG+D F+N+V+++ E +G EK IG VVI
Sbjct: 2 GPPQPELKKYLDKKVFVQLNGSRKVVGVVRGYDVFLNIVLEDAFEEKDGGEKVKIGTVVI 61
Query: 63 RGNSVVTVEALE 74
RGNSVV +EA+E
Sbjct: 62 RGNSVVMLEAME 73
>gi|169602875|ref|XP_001794859.1| hypothetical protein SNOG_04441 [Phaeosphaeria nodorum SN15]
gi|160706278|gb|EAT88201.2| hypothetical protein SNOG_04441 [Phaeosphaeria nodorum SN15]
Length = 84
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNS 66
P+LKKY++K++ ++LN +R ++G LRG+D ++N+V+D +E G EK IGMVVIRGN+
Sbjct: 6 PELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALEEKAGGEKTRIGMVVIRGNA 65
Query: 67 VVTVEALEPVSK 78
VV +EAL+ +++
Sbjct: 66 VVMLEALDRINQ 77
>gi|60692640|gb|AAX30638.1| SJCHGC06306 protein [Schistosoma japonicum]
gi|226485693|emb|CAX75266.1| putative small nuclear ribonucleoprotein G [Schistosoma
japonicum]
gi|226485695|emb|CAX75267.1| putative small nuclear ribonucleoprotein G [Schistosoma
japonicum]
gi|226485697|emb|CAX75268.1| putative small nuclear ribonucleoprotein G [Schistosoma
japonicum]
Length = 76
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGM 59
MS++ QP +LKKY+DK+L++KLNANR +VG LRGFD FMN+V+ + EV + + I M
Sbjct: 1 MSKAHQP-ELKKYLDKRLRLKLNANREVVGILRGFDAFMNIVVSDAYEVTKDGTQIKIDM 59
Query: 60 VVIRGNSVVTVEALEPV 76
V+RGNS+ VE ++ +
Sbjct: 60 AVVRGNSINIVEGVDRI 76
>gi|429853426|gb|ELA28500.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 104
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNS 66
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D VE G EK +GMVVIRGNS
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGEKVRLGMVVIRGNS 65
Query: 67 VVTVEALEPVSKSQ 80
VV L + S+
Sbjct: 66 VVRGRELVATTASR 79
>gi|396471648|ref|XP_003838919.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
gi|312215488|emb|CBX95440.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
Length = 84
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNS 66
P+LKKY++K++ ++LN +R ++G LRG+D ++N+V+D +E G EK IGMVVIRGNS
Sbjct: 6 PELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALEEKAGGEKVRIGMVVIRGNS 65
Query: 67 VVTVEALEPVSK 78
VV +EAL+ +++
Sbjct: 66 VVMLEALDRINQ 77
>gi|440302928|gb|ELP95234.1| small nuclear ribonucleoprotein G, putative [Entamoeba invadens
IP1]
Length = 88
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE---KNDIGMVVIRG 64
P+LK YM+K++ +K++ NR I+G LRGFD+++NLV+D+ + + E K +G ++IRG
Sbjct: 13 PELKHYMEKRIYVKIHCNRAIIGVLRGFDEYLNLVLDDAFDASHPENPQKIQLGQILIRG 72
Query: 65 NSVVTVEALEPVS 77
NSV+++E ++PV
Sbjct: 73 NSVLSLETVDPVQ 85
>gi|255710607|ref|XP_002551587.1| KLTH0A02970p [Lachancea thermotolerans]
gi|238932964|emb|CAR21145.1| KLTH0A02970p [Lachancea thermotolerans CBS 6340]
Length = 76
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGN 65
P+LKKYMDKK+ I+LN +R +VG LRGFD F+N+V+D+ VEV +G + V+RGN
Sbjct: 5 PELKKYMDKKVYIQLNGSRKLVGVLRGFDIFLNVVLDDAVEVRKDGTKFAMGSQSVVRGN 64
Query: 66 SVVTVEALEPVS 77
S+V++EALE +
Sbjct: 65 SIVSLEALETFA 76
>gi|451850030|gb|EMD63333.1| hypothetical protein COCSADRAFT_38193 [Cochliobolus sativus
ND90Pr]
gi|452001852|gb|EMD94311.1| hypothetical protein COCHEDRAFT_1170230 [Cochliobolus
heterostrophus C5]
Length = 84
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNS 66
P+LKKY++K++ ++LN +R ++G LRG+D ++N+V+D +E G EK IGMVVIRGN+
Sbjct: 6 PELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALEEKAGGEKVRIGMVVIRGNA 65
Query: 67 VVTVEALEPVSK 78
VV +EAL+ +++
Sbjct: 66 VVMLEALDRINQ 77
>gi|302310596|ref|XP_453405.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199425041|emb|CAH00501.2| KLLA0D07678p [Kluyveromyces lactis]
Length = 73
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIG-MVVIRGNS 66
PDL+KYMDKKL ++LN NR I+G LRG+D F+NLV+DN +++ + +G V+RGNS
Sbjct: 4 PDLRKYMDKKLILQLNGNRKIIGILRGYDAFLNLVLDNPIQIFEEGEVQMGPQTVVRGNS 63
Query: 67 VVTVEALE 74
+V++E L+
Sbjct: 64 IVSIEPLD 71
>gi|342883326|gb|EGU83840.1| hypothetical protein FOXB_05622 [Fusarium oxysporum Fo5176]
Length = 93
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%), Gaps = 10/80 (12%)
Query: 8 PDLKK-------YMDKKLQIKLNANRMIVGTLRGFDQ--FMNLVIDNTVEV-NGNEKNDI 57
P+LKK Y+DK+L ++LN +R ++G LRG+D+ F+N+V+D VE +G EK I
Sbjct: 6 PELKKASLDLFCYLDKRLFVQLNGSRKVIGILRGYDKQVFLNIVLDEAVEEKDGGEKERI 65
Query: 58 GMVVIRGNSVVTVEALEPVS 77
GMVVIRGNSVV +EALE +
Sbjct: 66 GMVVIRGNSVVMLEALERIG 85
>gi|294945142|ref|XP_002784569.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
gi|239897680|gb|EER16365.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
Length = 59
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
Query: 21 KLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNSVVTVEALEPVSK 78
KLN NR +VG LRG+DQFMNLV+DN VE V+ EK DIGM VIRGNSV+ E L+ V++
Sbjct: 1 KLNGNRHVVGVLRGYDQFMNLVLDNAVELVSRTEKKDIGMTVIRGNSVLMWECLDRVTQ 59
>gi|425781950|gb|EKV19884.1| Small nuclear ribonucleoprotein SmG, putative [Penicillium
digitatum PHI26]
Length = 85
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 8/78 (10%)
Query: 8 PDLKK-------YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
P+LKK YM+K++ +LN NR ++G LRG+D FMN+V+D E +G EK GM
Sbjct: 6 PELKKVSVSHLMYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKDGGEKVSAGM 65
Query: 60 VVIRGNSVVTVEALEPVS 77
VVIRGNS+V +EALE ++
Sbjct: 66 VVIRGNSIVMLEALERIT 83
>gi|448122563|ref|XP_004204478.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|448124870|ref|XP_004205036.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|358249669|emb|CCE72735.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|358350017|emb|CCE73296.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
Length = 74
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
Query: 7 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRG 64
P+LK Y++KK+ I+LN R ++GTLRG+D F+N+ + +E +GN K DIG VVIRG
Sbjct: 4 APELKNYLNKKISIQLNGTRKVIGTLRGYDIFLNVTLSEALEEQKDGN-KLDIGTVVIRG 62
Query: 65 NSVVTVEALEPV 76
NSVV++E+LE +
Sbjct: 63 NSVVSIESLEKI 74
>gi|367000792|ref|XP_003685131.1| hypothetical protein TPHA_0D00530 [Tetrapisispora phaffii CBS
4417]
gi|357523429|emb|CCE62697.1| hypothetical protein TPHA_0D00530 [Tetrapisispora phaffii CBS
4417]
Length = 76
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIR 63
P+LKKY++KK+ IKLN R I G LRG+D F+N+V+D+ VEV NG N V+R
Sbjct: 3 SAPELKKYLEKKIVIKLNGERRIAGVLRGYDVFLNVVVDDAVEVSKNGTSLNLGSQTVVR 62
Query: 64 GNSVVTVEALEPV 76
GNS++++EAL+ +
Sbjct: 63 GNSILSIEALDTL 75
>gi|19113214|ref|NP_596422.1| U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1
[Schizosaccharomyces pombe 972h-]
gi|6094213|sp|O74966.1|RUXG_SCHPO RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|3169092|emb|CAA19285.1| U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1
[Schizosaccharomyces pombe]
Length = 77
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 61/79 (77%), Gaps = 4/79 (5%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDIG 58
MS++G PDLKKY+D+++ ++LN +R + G LRG+D F+N+V+++++E V+G EK IG
Sbjct: 1 MSKAG-APDLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDG-EKVKIG 58
Query: 59 MVVIRGNSVVTVEALEPVS 77
V IRGNSV+ +E L+ ++
Sbjct: 59 SVAIRGNSVIMIETLDKMT 77
>gi|355565765|gb|EHH22194.1| hypothetical protein EGK_05417, partial [Macaca mulatta]
Length = 95
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPVSK 78
V N VV + L+ VS+
Sbjct: 60 VDNIPNKVVDPKLLKKVSQ 78
>gi|363748558|ref|XP_003644497.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888129|gb|AET37680.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
Length = 76
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIG-MVVIRGN 65
P+LKKYM++KL I+LN +R +VG LRG+D F+N+V+D+ +EV+ N K +G VIRGN
Sbjct: 5 PELKKYMERKLFIQLNGSRKVVGVLRGYDVFLNVVLDDALEVHKNGRKFPLGDHTVIRGN 64
Query: 66 SVVTVEALEPVS 77
S+V++E LE +S
Sbjct: 65 SIVSLEPLESLS 76
>gi|346325864|gb|EGX95460.1| small nuclear ribonucleoprotein SmG [Cordyceps militaris CM01]
Length = 85
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 54/73 (73%), Gaps = 3/73 (4%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMV--VIRG 64
P+LKKY+DK+L ++LN +R ++G LRG+D F+N+V+D+ E G K +GMV VIRG
Sbjct: 6 PELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAFEEREGGNKAKLGMVLKVIRG 65
Query: 65 NSVVTVEALEPVS 77
NSVV +EA+E +
Sbjct: 66 NSVVMLEAMERIG 78
>gi|213404670|ref|XP_002173107.1| small nuclear ribonucleoprotein [Schizosaccharomyces japonicus
yFS275]
gi|212001154|gb|EEB06814.1| small nuclear ribonucleoprotein [Schizosaccharomyces japonicus
yFS275]
Length = 77
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGM 59
MS++ PDLKKY+DK++ ++LN +R + G LRG+D F+N+V+++ E EK IG
Sbjct: 1 MSKAA-APDLKKYLDKQVFVQLNGSRKVYGVLRGYDIFLNIVVEDAYEEKSTGEKAPIGS 59
Query: 60 VVIRGNSVVTVEALEPVS 77
IRGNSV+ +EAL+ ++
Sbjct: 60 AAIRGNSVIMIEALDKIA 77
>gi|395731711|ref|XP_003775950.1| PREDICTED: small nuclear ribonucleoprotein G [Pongo abelii]
Length = 96
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 VVIRGNSVVTVEALEPVSK 78
V N VV+ + L+ V++
Sbjct: 60 VDNIPNKVVSPKFLKKVNQ 78
>gi|395815302|ref|XP_003781169.1| PREDICTED: small nuclear ribonucleoprotein G-like [Otolemur
garnettii]
Length = 73
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Query: 7 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGN 65
PP+LKK +DKKL LN R + G L+GFD MNLVID +E++ ++N+IGMVVI+GN
Sbjct: 6 PPELKKIIDKKLPWTLNGGRHVQGILQGFDTLMNLVIDECMEMSTSGQQNNIGMVVIQGN 65
Query: 66 SVVTVEALE 74
SV+ +EALE
Sbjct: 66 SVI-LEALE 73
>gi|452825043|gb|EME32042.1| small nuclear ribonucleoprotein G [Galdieria sulphuraria]
Length = 76
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 53/69 (76%), Gaps = 3/69 (4%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG--NEKNDIGMVVIRGN 65
PD+K+ MD+K+ ++LN NR + G LRG+DQFMN+V+++ VE G N+K +IG VV+RGN
Sbjct: 6 PDMKRLMDRKVSVQLNGNRKVEGVLRGYDQFMNIVLEDCVEKLGPMNDK-EIGTVVVRGN 64
Query: 66 SVVTVEALE 74
SV +E LE
Sbjct: 65 SVFILEVLE 73
>gi|14318502|ref|NP_116636.1| Smx2p [Saccharomyces cerevisiae S288c]
gi|730760|sp|P40204.1|RUXG_YEAST RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|499706|gb|AAB63977.1| small nuclear ribonucleoprotein E [Saccharomyces cerevisiae]
gi|559938|emb|CAA86353.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270816|gb|AAS56789.1| YFL017W-A [Saccharomyces cerevisiae]
gi|285811877|tpg|DAA12422.1| TPA: Smx2p [Saccharomyces cerevisiae S288c]
Length = 77
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE---KNDIGM-VVIR 63
P+LKKYMDKK+ + +N +R + G LRG+D F+N+V+D+ +E+NG + + +G+ VIR
Sbjct: 5 PELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEINGEDPANNHQLGLQTVIR 64
Query: 64 GNSVVTVEALEPV 76
GNS++++EAL+ +
Sbjct: 65 GNSIISLEALDAI 77
>gi|148698069|gb|EDL30016.1| mCG121012 [Mus musculus]
Length = 90
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 2 SRSGQPPDLK---KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDI 57
SR Q P + +KL +KLN R + G L+GFD FMNLVID VE+ ++N+I
Sbjct: 12 SRHEQSPPSRTEESLWTRKLSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNNI 71
Query: 58 GMVVIRGNSVVTVEALEPV 76
GMVVIRGNS++ +EALE V
Sbjct: 72 GMVVIRGNSIIMLEALERV 90
>gi|259146173|emb|CAY79432.1| Smx2p [Saccharomyces cerevisiae EC1118]
Length = 77
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE---KNDIGM-VVIR 63
P+LKKYMDKK+ + +N +R + G LRG+D F+N+V+D+ +E+NG + + +G+ VIR
Sbjct: 5 PELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEINGEDPANNHPLGLQAVIR 64
Query: 64 GNSVVTVEALEPV 76
GNS++++EAL+ +
Sbjct: 65 GNSIISLEALDAI 77
>gi|255945545|ref|XP_002563540.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588275|emb|CAP86377.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 88
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 53/81 (65%), Gaps = 11/81 (13%)
Query: 8 PDLKK----------YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKND 56
P+LKK YM+K++ +LN NR ++G LRG+D FMN+V+D E G EK
Sbjct: 6 PELKKISADVVCFLQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKEGGEKVP 65
Query: 57 IGMVVIRGNSVVTVEALEPVS 77
IGM VIRGNSVV +EALE ++
Sbjct: 66 IGMSVIRGNSVVMLEALERIT 86
>gi|312385157|gb|EFR29724.1| hypothetical protein AND_23652 [Anopheles darlingi]
Length = 64
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNSVVTVEA 72
MDK+L +KLN R++ G LRGFD FMN+V+D ++ E +N+IGMVVIRGNS++ VEA
Sbjct: 1 MDKRLSLKLNGGRVVSGILRGFDPFMNVVLDESIEECKDGTRNNIGMVVIRGNSIILVEA 60
Query: 73 LEPV 76
L+ +
Sbjct: 61 LDRI 64
>gi|254567409|ref|XP_002490815.1| Small nuclear ribonucleoprotein G [Komagataella pastoris GS115]
gi|238030611|emb|CAY68535.1| Small nuclear ribonucleoprotein G [Komagataella pastoris GS115]
gi|328351196|emb|CCA37596.1| U6 snRNA-associated Sm-like protein LSm6 [Komagataella pastoris
CBS 7435]
Length = 77
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---EKNDIGMVVIRG 64
P+LKKY+ ++ +K+NA R I G L G+D F+NL +D+ V+VN + E +G V+RG
Sbjct: 6 PELKKYLHHRISVKINAGRQIEGLLTGYDVFLNLTLDDCVQVNPSNRAEDTPVGSCVLRG 65
Query: 65 NSVVTVEALEPV 76
NSV+++EALE +
Sbjct: 66 NSVISIEALEAL 77
>gi|401625929|gb|EJS43908.1| smx2p [Saccharomyces arboricola H-6]
Length = 77
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG-NEKND--IGM-VVIR 63
P+LKKYMDKK+ + +N +R I G LRG+D F+N+V+D+ +E+NG N N+ +G+ VIR
Sbjct: 5 PELKKYMDKKILLNVNGSRKIAGILRGYDIFLNVVLDDAMEINGENAANNHPLGLQTVIR 64
Query: 64 GNSVVTVEALEPV 76
GNS++++EAL+ +
Sbjct: 65 GNSIISLEALDTI 77
>gi|355561845|gb|EHH18477.1| hypothetical protein EGK_15086 [Macaca mulatta]
Length = 63
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEA 72
MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++ +EA
Sbjct: 1 MDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIM-LEA 59
Query: 73 LEPV 76
LE V
Sbjct: 60 LERV 63
>gi|151940745|gb|EDN59132.1| Sm G [Saccharomyces cerevisiae YJM789]
gi|190406555|gb|EDV09822.1| small nuclear ribonucleoprotein G [Saccharomyces cerevisiae
RM11-1a]
gi|256268877|gb|EEU04227.1| Smx2p [Saccharomyces cerevisiae JAY291]
gi|349577899|dbj|GAA23066.1| K7_Smx2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299654|gb|EIW10747.1| Smx2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 77
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE---KNDIGM-VVIR 63
P+LKKYMDKK+ + +N +R + G LRG+D F+N+V+D+ +E+NG + + +G+ VIR
Sbjct: 5 PELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEINGEDPANNHPLGLQTVIR 64
Query: 64 GNSVVTVEALEPV 76
GNS++++EAL+ +
Sbjct: 65 GNSIISLEALDAI 77
>gi|254583570|ref|XP_002497353.1| ZYRO0F03564p [Zygosaccharomyces rouxii]
gi|238940246|emb|CAR28420.1| ZYRO0F03564p [Zygosaccharomyces rouxii]
Length = 76
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 53/71 (74%), Gaps = 2/71 (2%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGN 65
P+LK+Y+DKK+ ++LN R + G LRG+D F+N+V+D+ VEV +G+ N V+RGN
Sbjct: 5 PELKRYVDKKVLLQLNGARKVAGVLRGYDLFLNVVLDDAVEVGKDGSHHNLGSQSVVRGN 64
Query: 66 SVVTVEALEPV 76
S+V++EAL+ V
Sbjct: 65 SIVSLEALDTV 75
>gi|156839006|ref|XP_001643199.1| hypothetical protein Kpol_1011p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113798|gb|EDO15341.1| hypothetical protein Kpol_1011p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 76
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-DIG-MVVIRGN 65
P+LKKYM+KK+ ++LN +R + G LRG+D F+N+VID+ +E++ + N +G VIRGN
Sbjct: 5 PELKKYMEKKVLLQLNGSRKVAGILRGYDIFLNVVIDDAIEISKDGTNIPLGSQTVIRGN 64
Query: 66 SVVTVEALEPVS 77
SVV++EAL+ ++
Sbjct: 65 SVVSLEALDSIA 76
>gi|67468165|ref|XP_650141.1| small nuclear ribonucleo protein G [Entamoeba histolytica
HM-1:IMSS]
gi|56466712|gb|EAL44755.1| small nuclear ribonucleo protein G, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407041678|gb|EKE40885.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449707868|gb|EMD47446.1| small nuclear ribonucleo protein G, putative [Entamoeba
histolytica KU27]
Length = 81
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---IGMVVIRG 64
P+LK Y++K++ +K++ R I+G L G+D++MNLV+D + + + + IGM++IRG
Sbjct: 6 PELKHYLEKRILVKIHGKRSIIGVLSGYDEYMNLVLDEAYDASNPDTDKHIPIGMIMIRG 65
Query: 65 NSVVTVEALEPVSKSQ 80
NS+++VE ++PV ++
Sbjct: 66 NSILSVETIDPVHTTK 81
>gi|403216098|emb|CCK70596.1| hypothetical protein KNAG_0E03380 [Kazachstania naganishii CBS
8797]
Length = 77
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 53/72 (73%), Gaps = 3/72 (4%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGM---VVIRG 64
P+LK+YMDKK+ +++N +R + GT+RGFD F+N+V+D+ VE+ E + VIRG
Sbjct: 5 PELKRYMDKKVVLQINGSRKVAGTMRGFDLFLNVVLDDAVELLQEEGKTSPLGSPTVIRG 64
Query: 65 NSVVTVEALEPV 76
NS+V++E+LE V
Sbjct: 65 NSIVSIESLETV 76
>gi|351714344|gb|EHB17263.1| Small nuclear ribonucleoprotein G, partial [Heterocephalus
glaber]
Length = 60
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ PP+LKK+MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGM
Sbjct: 1 MSKA-HPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGM 59
Query: 60 V 60
V
Sbjct: 60 V 60
>gi|70950373|ref|XP_744515.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524501|emb|CAH78948.1| hypothetical protein PC001427.02.0 [Plasmodium chabaudi chabaudi]
Length = 60
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 20 IKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVS 77
+ LN NR+IVG LRG+D FMNLV+DNTVE+ +E +IG+VVIRGNS+ E L+ V+
Sbjct: 1 VYLNGNRLIVGVLRGYDTFMNLVLDNTVEIKKDENIEIGIVVIRGNSISYWECLDKVN 58
>gi|343428207|emb|CBQ71737.1| probable SMX2-snRNP G protein [Sporisorium reilianum SRZ2]
Length = 87
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 9/78 (11%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV------NGNEKND---IG 58
P+LK+++DK++ + + R I GTLRGFD F+NLV+D+ VE N N +D G
Sbjct: 7 PELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDDAVEQVRPEAGNTNAWHDGDRCG 66
Query: 59 MVVIRGNSVVTVEALEPV 76
VV+RGNSV ++EALE V
Sbjct: 67 TVVVRGNSVTSLEALENV 84
>gi|410077765|ref|XP_003956464.1| hypothetical protein KAFR_0C03370 [Kazachstania africana CBS
2517]
gi|372463048|emb|CCF57329.1| hypothetical protein KAFR_0C03370 [Kazachstania africana CBS
2517]
Length = 76
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-DIG-MVVIRGN 65
P+LKKYMDKK+ +++N +R + G LRG+D F+N+V+D+ E++ N+ N +G VIRGN
Sbjct: 5 PELKKYMDKKVLLQINGSRKVAGILRGYDIFLNIVLDDAFELSKNDSNIPLGSQTVIRGN 64
Query: 66 SVVTVEALEPV 76
S+V +EAL+ +
Sbjct: 65 SIVAMEALDSI 75
>gi|440907817|gb|ELR57914.1| hypothetical protein M91_09610 [Bos grunniens mutus]
Length = 247
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 17 KLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEALEP 75
K +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++ +EALE
Sbjct: 187 KTGVKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEALER 246
Query: 76 V 76
V
Sbjct: 247 V 247
>gi|45199029|ref|NP_986058.1| AFR511Cp [Ashbya gossypii ATCC 10895]
gi|44985104|gb|AAS53882.1| AFR511Cp [Ashbya gossypii ATCC 10895]
gi|374109289|gb|AEY98195.1| FAFR511Cp [Ashbya gossypii FDAG1]
Length = 76
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIG-MVVIR 63
P+LKKYM++K+ ++LN R +VG LRG+D F+N+V+D+ VE+ K+ +G +IR
Sbjct: 3 STPELKKYMERKVFLQLNGARKVVGVLRGYDLFLNVVLDDAVEITRTGGKHGLGDHTIIR 62
Query: 64 GNSVVTVEALEPVS 77
GNS+V++E LE +S
Sbjct: 63 GNSIVSLELLESLS 76
>gi|148676870|gb|EDL08817.1| mCG2658 [Mus musculus]
Length = 64
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEA 72
MDKKL +KLN R + G L GFD FMNLV D VE+ ++N+I MVVIRGNS++ +EA
Sbjct: 1 MDKKLSLKLNGGRHVQGILLGFDPFMNLVTDECVEMATSGQQNNISMVVIRGNSIIKLEA 60
Query: 73 LEPV 76
LE V
Sbjct: 61 LERV 64
>gi|326936526|ref|XP_003214304.1| PREDICTED: small nuclear ribonucleoprotein G-like, partial
[Meleagris gallopavo]
Length = 60
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Query: 18 LQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNSVVTVEALEPV 76
L +KLN R + G LRGFD FMNLVID VE+ G ++N+IGMVVIRGNS++ +EALE V
Sbjct: 1 LVVKLNGGRHVQGILRGFDPFMNLVIDECVEMAPGGQQNNIGMVVIRGNSIIMLEALERV 60
>gi|395841395|ref|XP_003793525.1| PREDICTED: uncharacterized protein LOC100954411 [Otolemur
garnettii]
Length = 186
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVV 68
L K + + +KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++
Sbjct: 119 LLKLLFPFIIVKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSII 178
Query: 69 TVEALEPV 76
+EALE V
Sbjct: 179 MLEALERV 186
>gi|328770153|gb|EGF80195.1| hypothetical protein BATDEDRAFT_11709 [Batrachochytrium
dendrobatidis JAM81]
Length = 70
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVI-DNTVEVNGNEKNDIGMVVIRGNSVV 68
+ +YMD+KL ++LN NR + G LRG+D FMN+V+ D + E+ EKN +G +V+RGNS+
Sbjct: 1 MDRYMDRKLFVQLNGNRKVTGVLRGYDPFMNIVLEDASEELGDGEKNFLGSIVVRGNSIG 60
Query: 69 TVEALEPVS 77
+EA+E V+
Sbjct: 61 VLEAIEKVA 69
>gi|449267710|gb|EMC78623.1| Small nuclear ribonucleoprotein G, partial [Columba livia]
Length = 58
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 45/58 (77%), Gaps = 1/58 (1%)
Query: 20 IKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNSVVTVEALEPV 76
+KLN R + G LRGFD FMNLVID VE+ G ++N+IGMVVIRGNS++ +EALE V
Sbjct: 1 VKLNGGRHVQGILRGFDPFMNLVIDECVEMAPGGQQNNIGMVVIRGNSIIMLEALERV 58
>gi|344242125|gb|EGV98228.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 51
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN 52
MS++ PP+LKK MDKKL +KLN R + G LRGFD FMNLVID VE++GN
Sbjct: 1 MSKA-HPPELKKCMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEIDGN 51
>gi|302309677|ref|XP_002999529.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049117|emb|CAR58012.1| unnamed protein product [Candida glabrata]
Length = 76
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIG-MVVIRGN 65
P+LKKY+DKK+ ++LN +R + G LRG+D F+N+V+D+ +E + EK +G V+RG+
Sbjct: 5 PELKKYVDKKILLQLNGSRQVAGVLRGYDLFLNVVLDDAIELLKDGEKQKLGSQTVVRGS 64
Query: 66 SVVTVEALEPV 76
S++++EAL+ +
Sbjct: 65 SILSLEALDTI 75
>gi|395839861|ref|XP_003792793.1| PREDICTED: small nuclear ribonucleoprotein G-like [Otolemur
garnettii]
Length = 101
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 7 PPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGN 65
PP+LKK +DKKL +KL++ R + G L+ FD FMNLVID VE+ ++N+I M VI GN
Sbjct: 33 PPELKKIIDKKLWLKLSSGRYVQGILQRFDSFMNLVIDECVEMATSGQQNNIVMGVIGGN 92
Query: 66 SVVTVEALE 74
+ +EALE
Sbjct: 93 HITMLEALE 101
>gi|134083643|emb|CAK47035.1| unnamed protein product [Aspergillus niger]
Length = 105
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVV 68
++YM+K++ +LN NR ++G LRG+D FMN+V+D E G EK IGM+VIRGNSVV
Sbjct: 19 FQQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMIVIRGNSVV 78
Query: 69 TVE 71
+E
Sbjct: 79 MLE 81
>gi|126654168|ref|XP_001388399.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
gi|126117492|gb|EAZ51592.1| small nuclear ribonucleoprotein, putative [Cryptosporidium parvum
Iowa II]
Length = 62
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 18 LQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPV 76
L +KLN NR I+G+LRG+D FMNLV++NT EV + K IG VIRGNSV+ E ++ V
Sbjct: 2 LIVKLNGNRQIIGSLRGYDNFMNLVLENTTEVLDSTKKSIGTTVIRGNSVIMWECIDKV 60
>gi|71006012|ref|XP_757672.1| hypothetical protein UM01525.1 [Ustilago maydis 521]
gi|46097347|gb|EAK82580.1| hypothetical protein UM01525.1 [Ustilago maydis 521]
Length = 134
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 9/76 (11%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV------NGNEKND---IG 58
P+LK+++DK++ + + R I GTLRGFD F+NLV+D +E N N D G
Sbjct: 54 PELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDEAIEQVHPEAGNPNVWQDGDRCG 113
Query: 59 MVVIRGNSVVTVEALE 74
VV+RGNSV ++EALE
Sbjct: 114 TVVVRGNSVTSLEALE 129
>gi|448513188|ref|XP_003866888.1| Smx2 protein [Candida orthopsilosis Co 90-125]
gi|380351226|emb|CCG21450.1| Smx2 protein [Candida orthopsilosis Co 90-125]
Length = 90
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDIGMVVIRGN 65
P+LK Y+DKK+ ++LN +R ++G LRG+D F+N+ I + +E ++G EK +IG+ VIRGN
Sbjct: 6 PELKAYLDKKVSVQLNGSRKVIGILRGYDIFLNVTISDALEERIDG-EKLNIGITVIRGN 64
Query: 66 SVVTVEA 72
S+V++E
Sbjct: 65 SIVSLEV 71
>gi|388852751|emb|CCF53669.1| probable SMX2-snRNP G protein [Ustilago hordei]
Length = 87
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 9/78 (11%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV------NGNEKND---IG 58
P+LK+++DK++ + + R I GTLRGFD F+NLV+D+ +E N N D G
Sbjct: 7 PELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDDAIEQVHPEAGNPNVWQDGDRCG 66
Query: 59 MVVIRGNSVVTVEALEPV 76
VV+RGNSV ++EALE V
Sbjct: 67 TVVVRGNSVTSLEALENV 84
>gi|354546754|emb|CCE43486.1| hypothetical protein CPAR2_211300 [Candida parapsilosis]
Length = 73
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDIGMVVIRGN 65
P+LK Y+DKK+ ++LN +R ++G LRG+D F+N+ I + +E ++G EK +IG+ VIRGN
Sbjct: 6 PELKAYLDKKVSVQLNGSRKVIGILRGYDIFLNVTISDALEERIDG-EKLNIGITVIRGN 64
Query: 66 SVVTVEA 72
S+V++E
Sbjct: 65 SIVSLEV 71
>gi|148666747|gb|EDK99163.1| mCG130514, isoform CRA_c [Mus musculus]
gi|149036611|gb|EDL91229.1| rCG56468, isoform CRA_c [Rattus norvegicus]
Length = 58
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 20 IKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEALEPV 76
+KLN R + G LRGFD FMNLVID VE+ ++N+IGMVVIRGNS++ +EALE V
Sbjct: 1 MKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEALERV 58
>gi|367011365|ref|XP_003680183.1| hypothetical protein TDEL_0C00830 [Torulaspora delbrueckii]
gi|359747842|emb|CCE90972.1| hypothetical protein TDEL_0C00830 [Torulaspora delbrueckii]
Length = 76
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIR 63
P+LK+Y+DKK+ +++N +R + G LRG+D F+N+V+D+ VE+ +G+ V+R
Sbjct: 3 STPELKRYVDKKVVLQVNGSRKLAGVLRGYDVFLNVVLDDAVELLKDGSNHALGSQTVVR 62
Query: 64 GNSVVTVEALEPVS 77
GNS+V++EAL+ V+
Sbjct: 63 GNSIVSLEALDTVT 76
>gi|145516418|ref|XP_001444103.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411503|emb|CAK76706.1| unnamed protein product [Paramecium tetraurelia]
Length = 104
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 18/93 (19%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---NGNEKN--- 55
+ G DL KY K+L+IKLNA R I+GT+ GFD FMNLV+D+ E+ G E
Sbjct: 10 HKQGYQADLNKYFGKRLKIKLNAKRTIIGTVIGFDIFMNLVLDHCKELIPGQGAENKDNL 69
Query: 56 ------------DIGMVVIRGNSVVTVEALEPV 76
DIG ++RGNS++ E L+ V
Sbjct: 70 YPGFSNVTDQLVDIGQAIVRGNSIIMWECLDKV 102
>gi|443899154|dbj|GAC76485.1| hypothetical protein PANT_22d00050 [Pseudozyma antarctica T-34]
Length = 536
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 55/86 (63%), Gaps = 10/86 (11%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV------NGNEK 54
M++ QP +LK+++DK++ + + R + GTLRGFD F+NLV+D+ +E N N
Sbjct: 1 MAKVSQP-ELKRFLDKRIAVNIQGGRKVQGTLRGFDMFLNLVVDDAIEQVHPDAGNPNVW 59
Query: 55 ND---IGMVVIRGNSVVTVEALEPVS 77
D G VV+RGNSV ++EALE S
Sbjct: 60 QDGERCGTVVVRGNSVTSLEALENSS 85
>gi|71031248|ref|XP_765266.1| small nuclear ribonucleoprotein G [Theileria parva strain Muguga]
gi|68352222|gb|EAN32983.1| small nuclear ribonucleoprotein G, putative [Theileria parva]
Length = 86
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 20 IKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVS 77
+ LN +R +VG LRG+D FMN+V+DN +EV G ++ D+G+VV+RGNS++ E L+ V+
Sbjct: 27 VHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGEDQVDLGVVVVRGNSILYWECLDRVN 84
>gi|328872445|gb|EGG20812.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 125
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVV 61
Q PDL K +D+K+ ++LN NR +VG LRGFD FMN+V+ +TVE ++ E ++IGMVV
Sbjct: 7 QDPDLTKLLDRKMNVRLNGNRTVVGVLRGFDTFMNIVLKDTVEIISPTESHNIGMVV 63
>gi|403217282|emb|CCK71777.1| hypothetical protein KNAG_0H03630 [Kazachstania naganishii CBS
8797]
Length = 119
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 8/74 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV--------EVNGNEKNDIGMV 60
DL KY D K+++KL ++++VG L+G+DQ MNLV+D T E++ ++ D+G
Sbjct: 35 DLAKYKDSKVRVKLMGDKLVVGVLKGYDQLMNLVLDETAEYLKDANDEISRDKTRDLGFT 94
Query: 61 VIRGNSVVTVEALE 74
VIRGN +V++ LE
Sbjct: 95 VIRGNILVSISPLE 108
>gi|340505820|gb|EGR32114.1| small nuclear ribonucleoprotein, putative [Ichthyophthirius
multifiliis]
Length = 85
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEK-NDIGM 59
+ + G PDL+KY K+L + LN R + G ++G D +MN+V++N E+ G +K N+IG
Sbjct: 9 LHKQGYGPDLQKYNGKRLLVYLNGKRRVQGVVKGHDNYMNIVLENAQELIGKDKVNNIGK 68
Query: 60 VVIRGNSVVTVEALEPV 76
V+RGNS++ + L+ V
Sbjct: 69 AVVRGNSIIRWDCLDLV 85
>gi|83765541|dbj|BAE55684.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864814|gb|EIT74108.1| hypothetical protein Ao3042_09989 [Aspergillus oryzae 3.042]
Length = 122
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVE 71
M+K++ +LN NR ++G LRG+D FMN+V+D E G EK IGMVVIRGNSVV +E
Sbjct: 1 MEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMVVIRGNSVVMLE 59
>gi|393246263|gb|EJD53772.1| LSM-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 100
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNSVV 68
++MDKKL + + R + GTLRGFD F+NLV+D+ E +K +G VVIRGNSV
Sbjct: 32 FAQFMDKKLFVHIQGGRKVSGTLRGFDIFLNLVLDDAQDESVPAQKAPLGTVVIRGNSVT 91
Query: 69 TVEALEPV 76
++E LE +
Sbjct: 92 SMETLEAI 99
>gi|219119422|ref|XP_002180472.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407945|gb|EEC47880.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 87
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
+ R P DK+L++ LNANR ++GTLRG+D F+N+V+++ V +G V
Sbjct: 15 LERKLTCPYSNTQQDKRLRLSLNANRKVIGTLRGYDAFLNVVLED---VESETGQYLGQV 71
Query: 61 VIRGNSVVTVEALEPV 76
VIRGNS+V +E LE V
Sbjct: 72 VIRGNSIVQLEGLERV 87
>gi|402084831|gb|EJT79849.1| hypothetical protein GGTG_04932 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 143
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL +YMDK++Q+K N R + GTL+G+D MNLV+D+ E +GNE + +G+VVIR
Sbjct: 57 DLARYMDKEVQVKFNGGREVTGTLKGYDALMNLVLDDVKETMRDDDGNETSRPLGLVVIR 116
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V AL P S+
Sbjct: 117 GTLLV---ALSPTDGSE 130
>gi|58260010|ref|XP_567415.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229465|gb|AAW45898.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 71
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNSVVTV 70
++MD++L + L R I G LRG+D F+NLV+D+ E+ G ++ GMVVIRGNSV +
Sbjct: 4 EFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDSAFEELGGGQRKPCGMVVIRGNSVSAM 63
Query: 71 EALE 74
E L+
Sbjct: 64 ELLD 67
>gi|300123719|emb|CBK24991.2| unnamed protein product [Blastocystis hominis]
Length = 77
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNSV 67
+L YM K + +KLN NR++ G LRG+DQ MN+V+++ E VN NEK ++G VVIRGN +
Sbjct: 8 NLANYMGKVVTVKLNGNRIVEGVLRGYDQMMNIVLEDVYEVVNENEKQEMGRVVIRGNGI 67
Query: 68 VTVEA 72
+ ++
Sbjct: 68 IQMDC 72
>gi|303323787|ref|XP_003071885.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240111587|gb|EER29740.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 67
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVI 62
P+LKKYM+K+L I++N NR ++G LRG+D FMN+V+D +E G EK +GMV +
Sbjct: 6 PELKKYMEKRLLIQINGNRRVIGVLRGYDVFMNIVLDEAIEEKTGGEKVRLGMVAL 61
>gi|238492871|ref|XP_002377672.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
flavus NRRL3357]
gi|317156803|ref|XP_003190769.1| U6 snRNA-associated Sm-like protein LSm7 [Aspergillus oryzae RIB40]
gi|220696166|gb|EED52508.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
flavus NRRL3357]
Length = 133
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++++K N R +VGTL+GFDQ MNLV+D+ E GNE +G++V R
Sbjct: 49 DLSKYMDKEVRVKFNGGREVVGTLKGFDQLMNLVLDDVKESMRDDEGNENTRSLGLIVAR 108
Query: 64 GNSVVTV 70
G +V +
Sbjct: 109 GTIIVLI 115
>gi|384247364|gb|EIE20851.1| U6 snRNA-associated Sm-like protein LSm7 [Coccomyxa
subellipsoidea C-169]
Length = 99
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NG 51
MSR DL K++DK +++KL+ R + GTL+G+DQ +NLV+D TVE
Sbjct: 1 MSRKENALDLAKFIDKGVRVKLSGGREVEGTLKGYDQLLNLVLDETVEYLRDKEDMLRTT 60
Query: 52 NEKNDIGMVVIRGNSVVTV 70
NE +G+VV RG +V+ V
Sbjct: 61 NETRHLGLVVCRGTAVMMV 79
>gi|425783989|gb|EKV21800.1| Small nuclear ribonucleoprotein SmG, putative [Penicillium
digitatum Pd1]
Length = 104
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 27/97 (27%)
Query: 8 PDLKK-------YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
P+LKK YM+K++ +LN NR ++G LRG+D FMN+V+D E +G EK GM
Sbjct: 6 PELKKVSVSHLMYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKDGGEKVSAGM 65
Query: 60 V-------------------VIRGNSVVTVEALEPVS 77
V VIRGNS+V +EALE ++
Sbjct: 66 VVRSSLFTDAKNPANACRYQVIRGNSIVMLEALERIT 102
>gi|145524719|ref|XP_001448187.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415720|emb|CAK80790.1| unnamed protein product [Paramecium tetraurelia]
Length = 94
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 8/83 (9%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG--------NE 53
+ G DL KY K+L+IKLNA R I+GT+ GFD FMNL + +++ ++
Sbjct: 10 HKQGYQADLNKYFGKRLKIKLNAKRTIIGTVIGFDIFMNLDKEQKIKIICIQALSNVTDQ 69
Query: 54 KNDIGMVVIRGNSVVTVEALEPV 76
DIG ++RGNS++ E L+ V
Sbjct: 70 LVDIGQAIVRGNSIIMWECLDKV 92
>gi|425770497|gb|EKV08967.1| Small nuclear ribonucleoprotein (LSM7), putative [Penicillium
digitatum Pd1]
gi|425771863|gb|EKV10295.1| Small nuclear ribonucleoprotein (LSM7), putative [Penicillium
digitatum PHI26]
Length = 125
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND-----IGMVVIR 63
DL KYMDK++Q+K N R ++GTL+G+DQ MNLV+D+ E +E+ + +G++V R
Sbjct: 41 DLSKYMDKEVQVKFNGGREVIGTLKGYDQLMNLVLDDVKETMRDEEGNTTTRSMGLIVAR 100
Query: 64 GNSVVTV 70
G +V +
Sbjct: 101 GTLIVLI 107
>gi|389646277|ref|XP_003720770.1| hypothetical protein MGG_02938 [Magnaporthe oryzae 70-15]
gi|351638162|gb|EHA46027.1| hypothetical protein MGG_02938 [Magnaporthe oryzae 70-15]
gi|440483313|gb|ELQ63726.1| hypothetical protein OOW_P131scaffold00952g14 [Magnaporthe oryzae
P131]
Length = 146
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++Q+K N R ++GTL+G+D MNLV+D E GNE + +G+VV+R
Sbjct: 60 DLAKYMDKEVQVKFNGGREVIGTLKGYDALMNLVLDEVKETMRDEEGNESSRPLGLVVVR 119
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V A+ P S+
Sbjct: 120 GTLLV---AISPTDGSE 133
>gi|400600902|gb|EJP68570.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 255
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R ++GTL+GFD MNLV+D+ E GNE +G+VV+R
Sbjct: 170 DLTKYMDKQITVKFNGGREVMGTLKGFDALMNLVLDDVQETVRDEEGNESTRPLGLVVVR 229
Query: 64 GNSVVTVEALE 74
G +V + ++
Sbjct: 230 GTLLVLISPVD 240
>gi|321263328|ref|XP_003196382.1| hypothetical protein CGB_J0080C [Cryptococcus gattii WM276]
gi|317462858|gb|ADV24595.1| hypothetical protein CNJ03360 [Cryptococcus gattii WM276]
Length = 66
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGMVVIRGNSVVTVEA 72
MD++L + L R + G LRG+D F+NLV+DN E+ G ++ GMVVIRGNSV +E
Sbjct: 1 MDRRLFLHLQGGRQVSGVLRGYDMFLNLVVDNAFEELGGGQRKPCGMVVIRGNSVSAMEL 60
Query: 73 LE 74
L+
Sbjct: 61 LD 62
>gi|358057697|dbj|GAA96462.1| hypothetical protein E5Q_03129 [Mixia osmundae IAM 14324]
Length = 79
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGM---VVIRG 64
P+LKKYMDK++ + L NR I G LRGFD F+NLV+D + G VVIRG
Sbjct: 7 PELKKYMDKRIFVNLQGNRKISGVLRGFDIFLNLVLDEAKDETPGSAPLSGSSDGVVIRG 66
Query: 65 NSVVTVEALEPV 76
NSV ++E L+ +
Sbjct: 67 NSVSSIETLDRI 78
>gi|171676173|ref|XP_001903040.1| hypothetical protein [Podospora anserina S mat+]
gi|170936152|emb|CAP60812.1| unnamed protein product [Podospora anserina S mat+]
Length = 153
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DLKKYMDK++ +K N R + GTL+G+D MNLV+D E GNE +G+VV+R
Sbjct: 66 DLKKYMDKRITVKFNGGREVTGTLKGYDALMNLVLDEVQEAVRDDEGNETTRSLGLVVVR 125
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 126 GTLLVVI---SPVDGSE 139
>gi|444315628|ref|XP_004178471.1| hypothetical protein TBLA_0B01090 [Tetrapisispora blattae CBS 6284]
gi|387511511|emb|CCH58952.1| hypothetical protein TBLA_0B01090 [Tetrapisispora blattae CBS 6284]
Length = 142
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 13/82 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY D K+++KL R+++G L+G+DQ MNLV+D T+E + ++ ++G
Sbjct: 56 DLSKYKDSKVRVKLMGGRLVIGILKGYDQLMNLVLDETIEYIRDPTDPYVIQKDKTRNLG 115
Query: 59 MVVIRGNSVVTVEALEPVSKSQ 80
+ VIRGN ++T L PV S+
Sbjct: 116 LAVIRGNVLLT---LSPVDGSE 134
>gi|395834767|ref|XP_003790364.1| PREDICTED: small nuclear ribonucleoprotein G-like [Otolemur
garnettii]
Length = 64
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEA 72
MDKKL +KLNA R I G + F+NLVID VE+ ++N+IGMVVI+GN ++T+E
Sbjct: 1 MDKKLSLKLNAGRHIQRIWWGINPFLNLVIDECVEMATSGQQNNIGMVVIQGNGIITLEV 60
Query: 73 LEPV 76
L+ V
Sbjct: 61 LDQV 64
>gi|395818964|ref|XP_003782876.1| PREDICTED: uncharacterized protein LOC100942869 [Otolemur
garnettii]
Length = 450
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEA 72
MDKKL +KLN R + G RGFD +NLVID VE+ ++N I MVVI GN + +EA
Sbjct: 1 MDKKLSLKLNGGRHVQGISRGFDSSVNLVIDECVEMATSGQQNTIRMVVIGGNGISLLEA 60
Query: 73 LE 74
LE
Sbjct: 61 LE 62
>gi|302921652|ref|XP_003053324.1| hypothetical protein NECHADRAFT_59475 [Nectria haematococca mpVI
77-13-4]
gi|256734264|gb|EEU47611.1| hypothetical protein NECHADRAFT_59475 [Nectria haematococca mpVI
77-13-4]
Length = 133
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D+ EV GNE +G+VV+R
Sbjct: 48 DLAKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSLGLVVVR 107
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V V PV S+
Sbjct: 108 GTLLVLV---SPVDGSE 121
>gi|378730773|gb|EHY57232.1| small nuclear ribonucleoprotein [Exophiala dermatitidis NIH/UT8656]
Length = 138
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KY+DK++ +K N R IVGTL+G+DQ MNLV+D+ E GNE +G+VV R
Sbjct: 53 DLGKYVDKQITVKFNGGREIVGTLKGYDQLMNLVLDDVKETMRDDEGNETTRPLGLVVAR 112
Query: 64 GNSVVTVEALE 74
G +V + L+
Sbjct: 113 GTLLVLISPLD 123
>gi|402894927|ref|XP_003910591.1| PREDICTED: small nuclear ribonucleoprotein G-like protein-like
[Papio anubis]
Length = 75
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIR 63
P LKK MDK +KLN R + G LRG FMNL+ID V++ ++N+I V I
Sbjct: 4 AHSPKLKKRMDK-FSLKLNGGRYVQGILRGSSHFMNLMIDECVKMAISGQQNNIRTVEIE 62
Query: 64 GNSVVTVEALEPV 76
GNS++T++ALE V
Sbjct: 63 GNSIITLKALEQV 75
>gi|380491285|emb|CCF35428.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 144
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D EV GNE +G+VV R
Sbjct: 59 DLSKYMDKQITVKFNGGREVTGTLKGYDALMNLVLDEVQEVMRDEEGNETTRSLGLVVAR 118
Query: 64 GNSVV---TVEALEPVS 77
G +V V+ EP++
Sbjct: 119 GTLLVLVSPVDGSEPIA 135
>gi|310794009|gb|EFQ29470.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 143
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D EV GNE +G+VV R
Sbjct: 58 DLSKYMDKQITVKFNGGREVTGTLKGYDALMNLVLDEVQEVMRDEEGNETTRSLGLVVAR 117
Query: 64 GNSVV---TVEALEPVS 77
G +V V+ EP++
Sbjct: 118 GTLLVLVSPVDGSEPIA 134
>gi|401842941|gb|EJT44937.1| SMX2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 67
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 50/67 (74%), Gaps = 4/67 (5%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE---KNDIGM-VVIRGNSVVT 69
MDKK+ + +N +R I G LRG+D F+N+V+D+ +E+NG + + +G+ VIRGNS+++
Sbjct: 1 MDKKILLNINGSRKIAGVLRGYDIFLNVVLDDAMEINGKDPASNHPLGLQTVIRGNSIIS 60
Query: 70 VEALEPV 76
+EAL+ +
Sbjct: 61 LEALDTI 67
>gi|145230750|ref|XP_001389639.1| U6 snRNA-associated Sm-like protein LSm7 [Aspergillus niger CBS
513.88]
gi|134055758|emb|CAK44131.1| unnamed protein product [Aspergillus niger]
gi|350638639|gb|EHA26995.1| hypothetical protein ASPNIDRAFT_205537 [Aspergillus niger ATCC
1015]
Length = 136
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++++K N R ++GTL+G+DQ MNLV+D+ E GNE +G+VV R
Sbjct: 52 DLNKYMDKEVRVKFNGGREVIGTLKGYDQLMNLVLDDVKESMRDDEGNENTRSLGLVVAR 111
Query: 64 GNSVVTV 70
G +V +
Sbjct: 112 GTIIVLI 118
>gi|46130650|ref|XP_389105.1| hypothetical protein FG08929.1 [Gibberella zeae PH-1]
gi|408391559|gb|EKJ70933.1| hypothetical protein FPSE_08901 [Fusarium pseudograminearum CS3096]
Length = 131
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D+ EV GNE +G+VV+R
Sbjct: 46 DLGKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSLGLVVVR 105
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V V PV S+
Sbjct: 106 GTLLVLV---SPVDGSE 119
>gi|452845630|gb|EME47563.1| hypothetical protein DOTSEDRAFT_69495 [Dothistroma septosporum
NZE10]
Length = 133
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-----DIGMVVIR 63
DL KYMDK++ +K N R + GTL+G+DQ MNLV+DN E+ +++ ++G++V R
Sbjct: 46 DLAKYMDKEISVKFNGGREVTGTLKGYDQLMNLVLDNVKELTRDDEGNTSTRNLGLLVAR 105
Query: 64 GNSVVTVEALE 74
G +V + L+
Sbjct: 106 GTLLVLISPLD 116
>gi|71012485|ref|XP_758502.1| hypothetical protein UM02355.1 [Ustilago maydis 521]
gi|46098160|gb|EAK83393.1| hypothetical protein UM02355.1 [Ustilago maydis 521]
Length = 175
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-------GMVV 61
DL KYMD+K+++K R + GTL+GFDQ MNLV+D E +E+ ++ G+VV
Sbjct: 90 DLSKYMDQKIRVKFAGGREVFGTLKGFDQLMNLVMDEVTESVRDEEGNVTDKTRNLGLVV 149
Query: 62 IRGNSVVTV 70
+RG ++ +
Sbjct: 150 LRGTALTVI 158
>gi|443926894|gb|ELU45444.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 306
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGM 59
MS++ QP +LKK+MDK+L I L R I G LRGFD F+NLV+D+ VE EK+ IG
Sbjct: 1 MSKASQP-ELKKFMDKRLFIHLQGGRKISGVLRGFDIFLNLVVDDAVEETVPAEKHPIGQ 59
Query: 60 V 60
V
Sbjct: 60 V 60
>gi|342886030|gb|EGU85973.1| hypothetical protein FOXB_03482 [Fusarium oxysporum Fo5176]
Length = 133
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKND----IGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D+ E V +E ND +G+VV+R
Sbjct: 48 DLGKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNDSTRSLGLVVVR 107
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V V PV S+
Sbjct: 108 GTLLVLV---SPVDGSE 121
>gi|452986071|gb|EME85827.1| hypothetical protein MYCFIDRAFT_181789 [Pseudocercospora fijiensis
CIRAD86]
Length = 125
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-----DIGMVVIR 63
DL KYMDK + +K N R + GTL+G+DQ MNLV+DN E +E ++G++V R
Sbjct: 38 DLAKYMDKDITVKFNGGREVTGTLKGYDQLMNLVLDNVKETTRDEDGNTSTRNLGLLVAR 97
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 98 GTLLVLI---SPVDGSE 111
>gi|440634700|gb|ELR04619.1| hypothetical protein GMDG_06901 [Geomyces destructans 20631-21]
Length = 137
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + G L+G+D MNLV+D+ EV +GNE +G+VV R
Sbjct: 53 DLSKYMDKRITVKFNGGREVTGALKGYDALMNLVLDDVQEVLRDDDGNETTRSLGLVVAR 112
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V V PV S+
Sbjct: 113 GTLLVLV---SPVDGSE 126
>gi|226530574|ref|NP_001148733.1| LSM7-like [Zea mays]
gi|195621704|gb|ACG32682.1| LSM7-like [Zea mays]
gi|413919649|gb|AFW59581.1| LSM7-like protein [Zea mays]
Length = 156
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 11/72 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND----------IG 58
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE N E++D +G
Sbjct: 68 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-NEREQDDPLKLSGKTRQLG 126
Query: 59 MVVIRGNSVVTV 70
++V RG +V+ V
Sbjct: 127 LIVCRGTAVMLV 138
>gi|336463585|gb|EGO51825.1| hypothetical protein NEUTE1DRAFT_53111 [Neurospora tetrasperma FGSC
2508]
Length = 144
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DLKKYMD+++ +K N R + GTL+G+D MNLV+D+ E GNE +G+VV R
Sbjct: 58 DLKKYMDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQEAVRDEEGNETTRPLGLVVAR 117
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 118 GTLLVVI---SPVDGSE 131
>gi|255711522|ref|XP_002552044.1| KLTH0B05896p [Lachancea thermotolerans]
gi|238933422|emb|CAR21606.1| KLTH0B05896p [Lachancea thermotolerans CBS 6340]
Length = 111
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 10/76 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND----------IG 58
+L KY D K+++KL R++VG L+G+DQ MNLV+D TVE + ++D +G
Sbjct: 21 NLSKYADNKIRVKLAGGRLVVGVLKGYDQLMNLVLDETVEHLRDPEDDTVILEGQTRELG 80
Query: 59 MVVIRGNSVVTVEALE 74
+VVIRG ++T+ ++
Sbjct: 81 LVVIRGTMLLTLSPMD 96
>gi|358253136|dbj|GAA52245.1| small nuclear ribonucleoprotein G [Clonorchis sinensis]
Length = 75
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Query: 20 IKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNSVVTVEALEPV 76
IKLN NR ++GTLRGFD FMN+VI++ +E+ + ++ I M VIRGNS+ VEA++ V
Sbjct: 18 IKLNGNREVIGTLRGFDAFMNIVINDAMEITKDGQQLRIDMAVIRGNSINIVEAIDRV 75
>gi|258563080|ref|XP_002582285.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907792|gb|EEP82193.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 139
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKND----IGMVVIR 63
DL KYMDK++ +K + R + GTL+G+DQ MNLV+D+ E+ +E ND +G++V R
Sbjct: 54 DLTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDDVKEIMRDDEGNDSTRSLGLIVAR 113
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 114 GTLLVLI---SPVDGSE 127
>gi|452002106|gb|EMD94564.1| hypothetical protein COCHEDRAFT_1221931 [Cochliobolus
heterostrophus C5]
Length = 135
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIR 63
DL KYMDK++ +K + R ++GTL+G+DQ MNLV+D E +E +I G++V R
Sbjct: 51 DLSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDEHGNIRYRKLGLIVAR 110
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 111 GTLLVVI---SPVDGSE 124
>gi|255941628|ref|XP_002561583.1| Pc16g12840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586206|emb|CAP93954.1| Pc16g12840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 125
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND-----IGMVVIR 63
DL KYMDK++Q+K + R + GTL+G+DQ MNLV+D E +E+ + +G++V R
Sbjct: 41 DLNKYMDKEVQVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDEEGNTTTRSMGLIVAR 100
Query: 64 GNSVVTV 70
G +V +
Sbjct: 101 GTLIVLI 107
>gi|367021900|ref|XP_003660235.1| hypothetical protein MYCTH_2050348 [Myceliophthora thermophila ATCC
42464]
gi|347007502|gb|AEO54990.1| hypothetical protein MYCTH_2050348 [Myceliophthora thermophila ATCC
42464]
Length = 141
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNE-KNDIGMVVIRGNS 66
DLKKYMDK++ +K N R G L+G+D MNLV+D E + GNE +G+VV+RG
Sbjct: 59 DLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLDEVEELLRGNEMTRPLGLVVVRGTL 118
Query: 67 VVTVEALEPVSKSQ 80
+V + PV S+
Sbjct: 119 LVVI---SPVDGSE 129
>gi|346977239|gb|EGY20691.1| hypothetical protein VDAG_10320 [Verticillium dahliae VdLs.17]
Length = 140
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDKK+ +K N R + GTL+G+D MNLV+D+ EV G E +G+VV R
Sbjct: 55 DLGKYMDKKITVKFNGGREVTGTLKGYDALMNLVLDDVEEVMRDDEGKENTRSLGLVVAR 114
Query: 64 GNSVV---TVEALEPVS 77
G +V V+ EP++
Sbjct: 115 GTLLVLVSPVDGSEPIA 131
>gi|302419873|ref|XP_003007767.1| RH73529p [Verticillium albo-atrum VaMs.102]
gi|261353418|gb|EEY15846.1| RH73529p [Verticillium albo-atrum VaMs.102]
Length = 141
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDKK+ +K N R + GTL+G+D MNLV+D+ EV G E +G+VV R
Sbjct: 56 DLGKYMDKKITVKFNGGREVTGTLKGYDALMNLVLDDVEEVMRDDEGKENTRSLGLVVAR 115
Query: 64 GNSVV---TVEALEPVS 77
G +V V+ EP++
Sbjct: 116 GTLLVLVSPVDGSEPIA 132
>gi|426335864|ref|XP_004029426.1| PREDICTED: small nuclear ribonucleoprotein G [Gorilla gorilla
gorilla]
Length = 101
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTV 70
++MDKKL +KLN R + G LRGFD FMNLVID VE+ ++N+IGMV N V+
Sbjct: 16 EFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVDNIPNKAVSP 75
Query: 71 EALEPVSK 78
+ L+ V++
Sbjct: 76 KFLKKVNQ 83
>gi|161899457|ref|XP_001712962.1| mRNA splicing factor snRNPG [Bigelowiella natans]
gi|75756457|gb|ABA27350.1| mRNA splicing factor snRNPG [Bigelowiella natans]
Length = 71
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSV 67
PDLK +M++++QI+L + GTLRGFDQF+N+V++ + E N ++++RGNS+
Sbjct: 8 PDLKLFMEEEIQIQLKNKLCLKGTLRGFDQFLNIVLEKS--SYSKESNYFDILIVRGNSI 65
Query: 68 VTVEAL 73
++V L
Sbjct: 66 ISVSKL 71
>gi|358385010|gb|EHK22607.1| hypothetical protein TRIVIDRAFT_60544 [Trichoderma virens Gv29-8]
Length = 132
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D E GNE + +G+VV+R
Sbjct: 47 DLAKYMDKEITVKFNGGREVRGTLKGYDALMNLVLDEVQETLRDEEGNESSRPLGLVVVR 106
Query: 64 GNSVVTV 70
G +V +
Sbjct: 107 GTLLVLI 113
>gi|451845213|gb|EMD58526.1| hypothetical protein COCSADRAFT_194481 [Cochliobolus sativus
ND90Pr]
Length = 136
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIR 63
DL KYMDK++ +K + R ++GTL+G+DQ MNLV+D E +E +I G++V R
Sbjct: 52 DLSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDEDGNIRYRKLGLIVAR 111
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 112 GTLLVVI---SPVDGSE 125
>gi|158267618|ref|NP_014252.2| Lsm7p [Saccharomyces cerevisiae S288c]
gi|150421590|sp|P53905.2|LSM7_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|259149212|emb|CAY82454.1| Lsm7p [Saccharomyces cerevisiae EC1118]
gi|285814507|tpg|DAA10401.1| TPA: Lsm7p [Saccharomyces cerevisiae S288c]
gi|392296845|gb|EIW07946.1| Lsm7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 115
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 12/78 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND------------ 56
DL KY D K+++KL ++++G L+G+DQ MNLV+D+TVE N ++
Sbjct: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 88
Query: 57 IGMVVIRGNSVVTVEALE 74
+G+ VIRG +V++ + E
Sbjct: 89 LGLTVIRGTILVSLSSAE 106
>gi|116193791|ref|XP_001222708.1| hypothetical protein CHGG_06613 [Chaetomium globosum CBS 148.51]
gi|88182526|gb|EAQ89994.1| hypothetical protein CHGG_06613 [Chaetomium globosum CBS 148.51]
Length = 139
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNE-KNDIGMVVIR 63
DLKKYMDK++ +K N R G L+G+D MNLV+D E+ GNE +G+VV+R
Sbjct: 54 DLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLDEVEELLRDDEGNEMTRPLGLVVVR 113
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V L PV S+
Sbjct: 114 GTLLVV---LSPVDGSE 127
>gi|854491|emb|CAA86879.1| orf2 [Saccharomyces cerevisiae]
gi|1302101|emb|CAA96030.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190409133|gb|EDV12398.1| snRNP protein [Saccharomyces cerevisiae RM11-1a]
gi|349580792|dbj|GAA25951.1| K7_Lsm7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 107
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 12/78 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND------------ 56
DL KY D K+++KL ++++G L+G+DQ MNLV+D+TVE N ++
Sbjct: 21 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 80
Query: 57 IGMVVIRGNSVVTVEALE 74
+G+ VIRG +V++ + E
Sbjct: 81 LGLTVIRGTILVSLSSAE 98
>gi|388579558|gb|EIM19880.1| DUF21-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 625
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV-EVNGNEKNDIGM 59
MS P+LKKYMDK++ + L ANR + G LRGFD F+NLV+D+ E EK IG
Sbjct: 1 MSAKISNPELKKYMDKRVLVHLQANRKVTGQLRGFDLFLNLVLDDASDETFAGEKTRIGQ 60
Query: 60 V 60
+
Sbjct: 61 I 61
>gi|453087944|gb|EMF15985.1| U6 snRNA-associated Sm-like protein LSm7 [Mycosphaerella populorum
SO2202]
Length = 134
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-----DIGMVVIR 63
DL KY++K + +K N R + GTL+GFDQ MNLV+DN E +E+ ++G++V R
Sbjct: 47 DLSKYLEKGITVKFNGGREVTGTLKGFDQLMNLVLDNVKETTRDEEGNTSTRNLGLLVAR 106
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 107 GTLLVLI---SPVDGSE 120
>gi|256269021|gb|EEU04361.1| Lsm7p [Saccharomyces cerevisiae JAY291]
Length = 108
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 12/78 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND------------ 56
DL KY D K+++KL ++++G L+G+DQ MNLV+D+TVE N ++
Sbjct: 22 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 81
Query: 57 IGMVVIRGNSVVTVEALE 74
+G+ VIRG +V++ + E
Sbjct: 82 LGLTVIRGTILVSLSSAE 99
>gi|330917406|ref|XP_003297804.1| hypothetical protein PTT_08326 [Pyrenophora teres f. teres 0-1]
gi|311329333|gb|EFQ94110.1| hypothetical protein PTT_08326 [Pyrenophora teres f. teres 0-1]
Length = 131
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIR 63
DL KYMDK++ +K + R +VGTL+G+DQ MNLV+D E +++ +I G++V R
Sbjct: 47 DLSKYMDKQITVKFSGGREVVGTLKGYDQLMNLVLDEVKEALTDDQGNIRYRKLGLIVAR 106
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 107 GTLLVVI---SPVDGSE 120
>gi|119186309|ref|XP_001243761.1| hypothetical protein CIMG_03202 [Coccidioides immitis RS]
gi|392870472|gb|EAS32278.2| hypothetical protein CIMG_03202 [Coccidioides immitis RS]
Length = 144
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K + R + GTL+G+DQ MNLV+D E GNE +G++V R
Sbjct: 60 DLTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDDEGNETTRSLGLIVAR 119
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 120 GTLLVLI---SPVDGSE 133
>gi|410080426|ref|XP_003957793.1| hypothetical protein KAFR_0F00610 [Kazachstania africana CBS
2517]
gi|372464380|emb|CCF58658.1| hypothetical protein KAFR_0F00610 [Kazachstania africana CBS
2517]
Length = 110
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI--------GMV 60
DL KY D K+++KL R+++G L+G+DQ MNLV+D TVE + ++I G
Sbjct: 26 DLAKYKDSKVRVKLMGGRVVMGILKGYDQLMNLVLDETVEYIKDSNDEISRDRTRILGFT 85
Query: 61 VIRGNSVVTVEALE 74
VIRG +V++ LE
Sbjct: 86 VIRGPILVSISPLE 99
>gi|297268959|ref|XP_002799786.1| PREDICTED: small nuclear ribonucleoprotein G-like protein-like
[Macaca mulatta]
Length = 75
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIR 63
P LKK MDK +KLN R + G L G FMNL+ID V++ ++N+I V I
Sbjct: 4 AHSPKLKKRMDK-FSLKLNGGRYVQGILWGSSHFMNLMIDECVKMAISGQQNNIRTVEIE 62
Query: 64 GNSVVTVEALEPV 76
GNS++T++ALE V
Sbjct: 63 GNSIITLKALEQV 75
>gi|226530979|ref|NP_001152342.1| LSM7-like [Zea mays]
gi|195651475|gb|ACG45205.1| LSM7-like [Zea mays]
gi|195655329|gb|ACG47132.1| LSM7-like [Zea mays]
gi|414585245|tpg|DAA35816.1| TPA: LSM7-like protein [Zea mays]
Length = 98
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 11/72 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND----------IG 58
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE E++D +G
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEYE-REQDDPLKLSGKTRQLG 68
Query: 59 MVVIRGNSVVTV 70
++V RG +V+ V
Sbjct: 69 LIVCRGTAVMLV 80
>gi|322703623|gb|EFY95229.1| U6 snRNA-associated protein LSm7, putative [Metarhizium anisopliae
ARSEF 23]
Length = 134
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D E GNE +G+VV R
Sbjct: 50 DLAKYMDKEITVKFNGGREVTGTLKGYDALMNLVLDEVRETVRDEEGNESTRPLGLVVAR 109
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 110 GTLLVVI---APVDGSE 123
>gi|151944390|gb|EDN62668.1| snRNP protein [Saccharomyces cerevisiae YJM789]
Length = 107
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 12/78 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND---------- 56
DL KY D K+++KL ++++G L+G+DQ MNLV+D+TVE N +++N+
Sbjct: 21 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMTNPDDENNTELISKNARK 80
Query: 57 IGMVVIRGNSVVTVEALE 74
+G+ VIRG +V++ + E
Sbjct: 81 LGLTVIRGTILVSLSSAE 98
>gi|303317868|ref|XP_003068936.1| U6 snRNA-associated Sm-like protein LSm7, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240108617|gb|EER26791.1| U6 snRNA-associated Sm-like protein LSm7, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320038992|gb|EFW20927.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 144
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K + R + GTL+G+DQ MNLV+D E GNE +G++V R
Sbjct: 60 DLTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDDEGNETTRSLGLIVAR 119
Query: 64 GNSVVTV 70
G +V +
Sbjct: 120 GTLLVLI 126
>gi|344281116|ref|XP_003412326.1| PREDICTED: small nuclear ribonucleoprotein G-like [Loxodonta
africana]
Length = 74
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGM 59
MS++ P LKK MD+KL +KLN R G L G FMNLV D VEV +K +IGM
Sbjct: 1 MSKA-HLPKLKKIMDEKL-LKLNGGRHAQGILWGLGPFMNLVKDKCVEVATSGQKKEIGM 58
Query: 60 VVIRGNSVVTVEALEPV 76
VV +GNS + +EALE V
Sbjct: 59 VVTQGNSNM-LEALEQV 74
>gi|340975579|gb|EGS22694.1| hypothetical protein CTHT_0011670 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 148
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNE-KNDIGMVVIR 63
DLKKYMDK++ +K N R G L+G+D MNLV+D+ E+ GNE +G+VV+R
Sbjct: 64 DLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLDDVEELLRDDEGNEMTRPLGLVVVR 123
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V V PV S+
Sbjct: 124 GTLLVFV---SPVDGSE 137
>gi|343427570|emb|CBQ71097.1| related to snRNP protein [Sporisorium reilianum SRZ2]
Length = 143
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 7/69 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN------DIGMVV 61
DL KYMD+K+++K R + GTL+GFDQ MNLV+D E + +E N ++G+VV
Sbjct: 58 DLSKYMDQKIRVKFAGGREVFGTLKGFDQLMNLVMDEVTESLRDDEGNVTDKTRNLGLVV 117
Query: 62 IRGNSVVTV 70
+RG ++ +
Sbjct: 118 LRGTALTVI 126
>gi|115492179|ref|XP_001210717.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197577|gb|EAU39277.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 132
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++++K N R ++G L+G+DQ MNLV+D+ E GNE +G++V R
Sbjct: 48 DLTKYMDKEVRVKFNGGREVLGLLKGYDQLMNLVLDDVKETMRDDEGNETTRSLGLIVAR 107
Query: 64 GNSVVTV 70
G +V +
Sbjct: 108 GTLIVLI 114
>gi|240274594|gb|EER38110.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325090925|gb|EGC44235.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 169
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYM+K++ +K N R + GTL+G+DQ MNLV+D+ EV GN+ +G++V R
Sbjct: 84 DLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVAR 143
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 144 GTLLVLI---SPVDGSE 157
>gi|322694161|gb|EFY85998.1| U6 snRNA-associated protein LSm7, putative [Metarhizium acridum
CQMa 102]
Length = 135
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D E GNE +G+VV R
Sbjct: 51 DLAKYMDKEITVKFNGGREVTGTLKGYDALMNLVLDEVRETVRDEEGNESTRPLGLVVAR 110
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 111 GTLLVVI---TPVDGSE 124
>gi|225561488|gb|EEH09768.1| predicted protein [Ajellomyces capsulatus G186AR]
Length = 174
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYM+K++ +K N R + GTL+G+DQ MNLV+D+ EV GN+ +G++V R
Sbjct: 89 DLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVAR 148
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 149 GTLLVLI---SPVDGSE 162
>gi|357166207|ref|XP_003580635.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Brachypodium distachyon]
Length = 100
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 11/72 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND----------IG 58
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE E++D +G
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESE-REQDDPLKLSTKTRQLG 68
Query: 59 MVVIRGNSVVTV 70
++V RG +V+ V
Sbjct: 69 LIVCRGTAVMLV 80
>gi|1401208|gb|AAD05369.1| small nucleolar ribonucleoprotein E homolog [Bigelowiella natans]
Length = 71
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSV 67
PDLK +M++++QI+L + GTLRGFDQF+N+V++ + E N ++++RGNS+
Sbjct: 8 PDLKLFMEEEIQIQLKNKLCLKGTLRGFDQFLNIVLEKS--SYSKESNYFDILIVRGNSI 65
Query: 68 VTVEAL 73
++V L
Sbjct: 66 MSVSKL 71
>gi|115475055|ref|NP_001061124.1| Os08g0177700 [Oryza sativa Japonica Group]
gi|38636805|dbj|BAD03046.1| putative snRNP splicing factor -related [Oryza sativa Japonica
Group]
gi|38636982|dbj|BAD03242.1| putative snRNP splicing factor -related [Oryza sativa Japonica
Group]
gi|113623093|dbj|BAF23038.1| Os08g0177700 [Oryza sativa Japonica Group]
gi|218200565|gb|EEC82992.1| hypothetical protein OsI_28028 [Oryza sativa Indica Group]
Length = 98
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 11/72 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND----------IG 58
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE E++D +G
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFE-REQDDPLKLSGKTRQLG 68
Query: 59 MVVIRGNSVVTV 70
++V RG +V+ V
Sbjct: 69 LIVCRGTAVMLV 80
>gi|303278768|ref|XP_003058677.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459837|gb|EEH57132.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 106
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN---------GNEKNDIGM 59
DL K++DK +++KL+ R + GTL+GFDQ +NLV+D VE ++ +G+
Sbjct: 10 DLGKFIDKGVRVKLSGGREVTGTLKGFDQLLNLVLDECVESLRDPEDPLKISDKTRKLGL 69
Query: 60 VVIRGNSVVTVEALE 74
+V RG SV+ V L+
Sbjct: 70 IVCRGTSVMVVSGLD 84
>gi|295664210|ref|XP_002792657.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278771|gb|EEH34337.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 180
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND-----IGMVVIR 63
DL KYM+K++ +K N R + GTL+G+DQ MNLV+D+ EV +++++ +G+VV R
Sbjct: 95 DLAKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDEDNQTTRPLGLVVAR 154
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 155 GTLLVLI---SPVDGSE 168
>gi|225677618|gb|EEH15902.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 179
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND-----IGMVVIR 63
DL KYM+K++ +K N R + GTL+G+DQ MNLV+D+ EV +++++ +G+VV R
Sbjct: 94 DLAKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDEDNQTTRPLGLVVAR 153
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 154 GTLLVLI---SPVDGSE 167
>gi|242077336|ref|XP_002448604.1| hypothetical protein SORBIDRAFT_06g029950 [Sorghum bicolor]
gi|241939787|gb|EES12932.1| hypothetical protein SORBIDRAFT_06g029950 [Sorghum bicolor]
Length = 98
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 11/72 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND----------IG 58
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE E++D +G
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESE-REQDDPLKLSGKTRQLG 68
Query: 59 MVVIRGNSVVTV 70
++V RG +V+ V
Sbjct: 69 LIVCRGTAVMLV 80
>gi|189208804|ref|XP_001940735.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976828|gb|EDU43454.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 131
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIR 63
DL KYMDK++ +K + R ++GTL+G+DQ MNLV+D E +++ +I G++V R
Sbjct: 47 DLSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDDEGNIRYRKLGLIVAR 106
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 107 GTLLVVI---SPVDGSE 120
>gi|396489534|ref|XP_003843128.1| hypothetical protein LEMA_P088880.1 [Leptosphaeria maculans JN3]
gi|312219706|emb|CBX99649.1| hypothetical protein LEMA_P088880.1 [Leptosphaeria maculans JN3]
Length = 202
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIR 63
DL KYMDK++ +K + R ++GTL+G+DQ MNLV+D E +++ +I G++V R
Sbjct: 117 DLNKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDDEGNIRYRKLGLIVAR 176
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 177 GTLLVVI---SPVDGSE 190
>gi|357144783|ref|XP_003573412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Brachypodium distachyon]
Length = 101
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 11/76 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND----------IG 58
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D +E E++D +G
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEVIEFE-REQDDPLKLSAKTRQLG 68
Query: 59 MVVIRGNSVVTVEALE 74
++V RG +V+ V E
Sbjct: 69 LIVCRGTAVMLVSPTE 84
>gi|390349986|ref|XP_798585.3| PREDICTED: LSM7 homolog, U6 small nuclear RNA associated (S.
cerevisiae)-like [Strongylocentrotus purpuratus]
Length = 104
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN---------GNEKNDIGM 59
DL KY+DK++++K R + G L+GFD +NLV+D T E ++ ++G+
Sbjct: 16 DLSKYIDKQIRVKFQGGREVTGVLKGFDPLLNLVLDGTTEFMRDPDDPFKLTDDTRNLGL 75
Query: 60 VVIRGNSVVTV---EALEPVS 77
V RG SVV + E +EP++
Sbjct: 76 AVCRGTSVVLICPAEGMEPIA 96
>gi|154282731|ref|XP_001542161.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410341|gb|EDN05729.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 171
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYM+K++ +K N R + GTL+G+DQ MNLV+D+ EV GN+ +G++V R
Sbjct: 86 DLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSLGLIVAR 145
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 146 GTLLVLI---SPVDGSE 159
>gi|397600435|gb|EJK57654.1| hypothetical protein THAOC_22279 [Thalassiosira oceanica]
Length = 78
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 37/46 (80%)
Query: 2 SRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV 47
S+ + PDLK++MDK+L++ LN NR +VGTLRG+D F+N+V++ +
Sbjct: 4 SKHQKGPDLKRFMDKRLKLSLNGNRKVVGTLRGYDAFLNVVLEEAM 49
>gi|403418112|emb|CCM04812.1| predicted protein [Fibroporia radiculosa]
Length = 355
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDN-TVEVNGNEKNDIGM 59
MS++ QP +LKK+MDKKL + L R + GTLRG+D F+NLV+D+ T E +K+ IG
Sbjct: 1 MSKASQP-ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVLDDATEETTPAQKHPIGT 59
Query: 60 V 60
V
Sbjct: 60 V 60
>gi|145349929|ref|XP_001419379.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579610|gb|ABO97672.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 100
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 14/86 (16%)
Query: 7 PP-----DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN---------GN 52
PP DL +++D+ +++KL+ R + GTL+G+DQ +NLV+D +E +
Sbjct: 2 PPKETVLDLARFIDRGVRVKLSGGREVTGTLKGYDQLLNLVLDEAIEHLRDAEDALKISD 61
Query: 53 EKNDIGMVVIRGNSVVTVEALEPVSK 78
E +G++V RG SV+ V AL+ + +
Sbjct: 62 ETRALGLLVCRGTSVMVVSALDSMEE 87
>gi|301098772|ref|XP_002898478.1| U6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
gi|262104903|gb|EEY62955.1| U6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
Length = 106
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 9/79 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN---------GNEKNDIGM 59
DL KY+D+++++K + R + GTL+G+DQ +NLV+D+ VE +E +G+
Sbjct: 18 DLAKYIDQEVRVKFHGGREVTGTLKGYDQLVNLVLDDCVEFLRDPSDEYRITDETRKVGL 77
Query: 60 VVIRGNSVVTVEALEPVSK 78
VV RG SV+ V ++ ++
Sbjct: 78 VVCRGTSVMLVSPVDGTAE 96
>gi|449463763|ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Cucumis sativus]
gi|449463765|ref|XP_004149602.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Cucumis sativus]
gi|449530742|ref|XP_004172352.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Cucumis sativus]
gi|449530744|ref|XP_004172353.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Cucumis sativus]
Length = 99
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRPLGL 69
Query: 60 VVIRGNSVVTVEALE 74
+V RG +V+ V ++
Sbjct: 70 IVCRGTAVMLVSPVD 84
>gi|121701131|ref|XP_001268830.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
clavatus NRRL 1]
gi|119396973|gb|EAW07404.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
clavatus NRRL 1]
Length = 140
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++++K N R + G L+G+DQ MNLV+D+ E GNE +G++V R
Sbjct: 56 DLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRDDEGNETTRSLGLIVAR 115
Query: 64 GNSVVTV 70
G +V +
Sbjct: 116 GTLIVLI 122
>gi|388507056|gb|AFK41594.1| unknown [Medicago truncatula]
Length = 99
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRSLGL 69
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 70 IVCRGTAVMLV 80
>gi|449296389|gb|EMC92409.1| hypothetical protein BAUCODRAFT_287708 [Baudoinia compniacensis
UAMH 10762]
Length = 133
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND-----IGMVVIR 63
DL KYMDK + +K N R + G L+G+DQ MNLV+DN E+ +++ + +G++V R
Sbjct: 47 DLTKYMDKDITVKFNGGREVTGLLKGYDQLMNLVLDNVKEITRDDEGNLSTRSLGLLVAR 106
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 107 GTLLVLI---SPVDGSE 120
>gi|340519781|gb|EGR50019.1| predicted protein [Trichoderma reesei QM6a]
Length = 100
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D E GNE + +G+VV+R
Sbjct: 17 DLAKYMDKEIIVKFNGGREVRGTLKGYDALMNLVLDQVQETLRDDEGNESSRSLGLVVVR 76
Query: 64 GNSVVTV 70
G +V +
Sbjct: 77 GTLLVLI 83
>gi|345563731|gb|EGX46716.1| hypothetical protein AOL_s00097g464 [Arthrobotrys oligospora ATCC
24927]
Length = 168
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K + R + G L+G+DQ MNLV+D+ EV GNE+ ++G+VV R
Sbjct: 81 DLAKYMDKRIIVKFSGGREVTGALKGYDQLMNLVLDDVQEVMRDDEGNEQTRELGLVVAR 140
Query: 64 GNSVVTVEALE 74
G +V + ++
Sbjct: 141 GPLLVLISPVD 151
>gi|406861450|gb|EKD14504.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 133
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDKK+ +K R + GTL+G+D MNLV+D+ EV GN + +G+VV R
Sbjct: 49 DLGKYMDKKITVKFTGGREVTGTLKGYDALMNLVLDDVDEVLRDDEGNTSSRSLGLVVAR 108
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V V PV S+
Sbjct: 109 GTLLVLV---SPVDGSE 122
>gi|302308616|ref|NP_985600.2| AFR053Cp [Ashbya gossypii ATCC 10895]
gi|299790714|gb|AAS53424.2| AFR053Cp [Ashbya gossypii ATCC 10895]
gi|374108830|gb|AEY97736.1| FAFR053Cp [Ashbya gossypii FDAG1]
Length = 115
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN---------DIGM 59
DL KY D ++++KL R++ G L+G+DQ MNLV+D TVE +E++ +G+
Sbjct: 30 DLAKYQDTQVRVKLMGGRLVTGVLKGYDQLMNLVLDETVEYLRDEEDASVVTQRTRPLGL 89
Query: 60 VVIRGNSVVTV 70
+VIRG ++++
Sbjct: 90 IVIRGTILLSL 100
>gi|356512406|ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
max]
Length = 99
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ ++G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRNLGL 69
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 70 IVCRGTAVMLV 80
>gi|351720779|ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycine max]
gi|255628715|gb|ACU14702.1| unknown [Glycine max]
Length = 99
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ ++G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRNLGL 69
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 70 IVCRGTAVMLV 80
>gi|367041894|ref|XP_003651327.1| hypothetical protein THITE_2111451 [Thielavia terrestris NRRL 8126]
gi|346998589|gb|AEO64991.1| hypothetical protein THITE_2111451 [Thielavia terrestris NRRL 8126]
Length = 155
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND-----IGMVVIR 63
DLKKYMD+++ +K N R G L+G+D MNLV+D+ EV +++ + +G+VV+R
Sbjct: 70 DLKKYMDQRITVKFNGGREATGVLKGYDALMNLVLDDVEEVLRDDEGNTTTRPLGLVVVR 129
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V V PV+ S+
Sbjct: 130 GTLLVVV---SPVNGSE 143
>gi|119495066|ref|XP_001264327.1| small nuclear ribonucleoprotein (LSM7), putative [Neosartorya
fischeri NRRL 181]
gi|119412489|gb|EAW22430.1| small nuclear ribonucleoprotein (LSM7), putative [Neosartorya
fischeri NRRL 181]
Length = 138
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++++K N R + G L+G+DQ MNLV+D+ E GNE +G++V R
Sbjct: 54 DLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRDDEGNETTRSLGLIVAR 113
Query: 64 GNSVVTV 70
G +V +
Sbjct: 114 GTLIVLI 120
>gi|297736225|emb|CBI24863.3| unnamed protein product [Vitis vinifera]
Length = 107
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 18 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGL 77
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 78 IVCRGTAVMLV 88
>gi|15227722|ref|NP_178480.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|30678085|ref|NP_849931.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|4582434|gb|AAD24820.1| putative snRNP splicing factor [Arabidopsis thaliana]
gi|27765062|gb|AAO23652.1| At2g03870 [Arabidopsis thaliana]
gi|110742944|dbj|BAE99367.1| putative snRNP splicing factor [Arabidopsis thaliana]
gi|330250666|gb|AEC05760.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|330250667|gb|AEC05761.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
Length = 99
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKTTDQTRRLGL 69
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 70 IVCRGTAVMLV 80
>gi|297814702|ref|XP_002875234.1| hypothetical protein ARALYDRAFT_484298 [Arabidopsis lyrata subsp.
lyrata]
gi|297321072|gb|EFH51493.1| hypothetical protein ARALYDRAFT_484298 [Arabidopsis lyrata subsp.
lyrata]
Length = 99
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKTTDQTRRLGL 69
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 70 IVCRGTAVMLV 80
>gi|294463208|gb|ADE77140.1| unknown [Picea sitchensis]
Length = 98
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D +E ++ +G+
Sbjct: 10 DLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDQDDPLKTTDQTRPLGL 69
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 70 IVCRGTAVMLV 80
>gi|359487263|ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Vitis vinifera]
gi|359487265|ref|XP_003633552.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Vitis vinifera]
gi|359487267|ref|XP_003633553.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
3 [Vitis vinifera]
gi|359487269|ref|XP_003633554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
4 [Vitis vinifera]
Length = 99
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPQKTTDQTRRLGL 69
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 70 IVCRGTAVMLV 80
>gi|224059650|ref|XP_002299952.1| predicted protein [Populus trichocarpa]
gi|224104033|ref|XP_002313290.1| predicted protein [Populus trichocarpa]
gi|118483640|gb|ABK93714.1| unknown [Populus trichocarpa]
gi|222847210|gb|EEE84757.1| predicted protein [Populus trichocarpa]
gi|222849698|gb|EEE87245.1| predicted protein [Populus trichocarpa]
Length = 99
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKTTDQTRRLGL 69
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 70 IVCRGTAVMLV 80
>gi|241955785|ref|XP_002420613.1| U6 snRNA-associated Sm-like protein, putative [Candida dubliniensis
CD36]
gi|223643955|emb|CAX41695.1| U6 snRNA-associated Sm-like protein, putative [Candida dubliniensis
CD36]
Length = 122
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV---------EVNGNEKNDIGM 59
DL KY D+K+++K R IVG L+GFDQ MNLV++N E+ ++ D G+
Sbjct: 34 DLNKYKDQKIRVKFIGGREIVGILKGFDQLMNLVLENVTETLRDPEDDEILTDKTRDFGL 93
Query: 60 VVIRGNSVVTVEALE 74
VV+R S++T+ ++
Sbjct: 94 VVVRCTSLLTISPVD 108
>gi|196002890|ref|XP_002111312.1| hypothetical protein TRIADDRAFT_55150 [Trichoplax adhaerens]
gi|190585211|gb|EDV25279.1| hypothetical protein TRIADDRAFT_55150 [Trichoplax adhaerens]
Length = 102
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL+K++DKK+++K R +G L+G+D +NLV+DN VE NE +G+
Sbjct: 15 DLQKHIDKKVRVKFQGGREAIGILKGYDPLLNLVLDNAVENLRDFEDLSRISNETRQLGL 74
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 75 VVCRGTSVVVI 85
>gi|327351953|gb|EGE80810.1| U6 snRNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 165
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYM+K++ +K N R + GTL+G+DQ MNLV+D+ E GN+ +G++V R
Sbjct: 80 DLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKETMRDDEGNQTTRSLGLIVAR 139
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 140 GTLLVLI---SPVDGSE 153
>gi|239612791|gb|EEQ89778.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 164
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYM+K++ +K N R + GTL+G+DQ MNLV+D+ E GN+ +G++V R
Sbjct: 79 DLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKETMRDDEGNQTTRSLGLIVAR 138
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 139 GTLLVLI---SPVDGSE 152
>gi|261194282|ref|XP_002623546.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239588560|gb|EEQ71203.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 160
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYM+K++ +K N R + GTL+G+DQ MNLV+D+ E GN+ +G++V R
Sbjct: 75 DLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKETMRDDEGNQTTRSLGLIVAR 134
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V + PV S+
Sbjct: 135 GTLLVLI---SPVDGSE 148
>gi|255544228|ref|XP_002513176.1| conserved hypothetical protein [Ricinus communis]
gi|223547674|gb|EEF49167.1| conserved hypothetical protein [Ricinus communis]
Length = 99
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEYLRDPDDPLKTTDQTRRLGL 69
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 70 IVCRGTAVMLV 80
>gi|388499482|gb|AFK37807.1| unknown [Lotus japonicus]
Length = 99
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE + +G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTAQTRSLGL 69
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 70 IVCRGTAVMLV 80
>gi|358393465|gb|EHK42866.1| hypothetical protein TRIATDRAFT_300894 [Trichoderma atroviride IMI
206040]
Length = 139
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK + +K N R + GTL+G+D MNLV+D E GNE +G+VV+R
Sbjct: 54 DLAKYMDKAIIVKFNGGREVRGTLKGYDALMNLVLDEVQETLRDDQGNETTRSLGLVVVR 113
Query: 64 GNSVVTV 70
G +V +
Sbjct: 114 GTLLVLI 120
>gi|313213028|emb|CBY36907.1| unnamed protein product [Oikopleura dioica]
gi|313234529|emb|CBY10486.1| unnamed protein product [Oikopleura dioica]
Length = 106
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
+L KY+DK +++K R G L+GFDQ +NLVID+T E E ++G+
Sbjct: 20 ELNKYLDKAIRVKFQGGREASGILKGFDQLLNLVIDSTTEQLRDVDDPYRPSTESRNLGL 79
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 80 VVCRGTSVVLI 90
>gi|238882730|gb|EEQ46368.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 123
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN---------DIGM 59
DL KY D+K+++K R +VG L+GFDQ MNLV++N E + ++ D+G+
Sbjct: 35 DLNKYKDQKIRVKFIGGREVVGILKGFDQLMNLVLENVTETLRDPEDDETLTDKTRDLGL 94
Query: 60 VVIRGNSVVTVEALE 74
VV+R S++T+ ++
Sbjct: 95 VVVRCTSLLTISPVD 109
>gi|448090028|ref|XP_004196966.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
gi|448094405|ref|XP_004197997.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
gi|359378388|emb|CCE84647.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
gi|359379419|emb|CCE83616.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
Length = 127
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL KY +KK+++K R I+G L+GFDQ MNLV+ N E V EK + +
Sbjct: 39 DLNKYTEKKIRVKFIGGRQIIGELKGFDQLMNLVLKNVEETLRDPEDDHVLTKEKRNYDL 98
Query: 60 VVIRGNSVVTVEALE 74
VV+RG S++T+ L+
Sbjct: 99 VVVRGPSLLTISPLD 113
>gi|281350538|gb|EFB26122.1| hypothetical protein PANDA_000104 [Ailuropoda melanoleuca]
Length = 57
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 11 KKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE-KNDIGMVVIRGNS 66
KK+MDKKL +KLN R I G L+ F+ FMNLVID E+ +E +N+ GMVV GN+
Sbjct: 1 KKFMDKKLSLKLNGGRHIQGILQEFNPFMNLVIDECTEMATSEQQNNTGMVVTGGNN 57
>gi|157134384|ref|XP_001663270.1| SM protein G, putative [Aedes aegypti]
gi|108870499|gb|EAT34724.1| AAEL013061-PA [Aedes aegypti]
Length = 127
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--------NGNEKNDIGMV 60
DL KY++K +++K + R G L+G+D +NLV+DNTVE E +G+V
Sbjct: 40 DLSKYLEKTIRVKFSGGREAAGVLKGYDPLLNLVLDNTVEFLRDPDDYKLAEETRHLGLV 99
Query: 61 VIRGNSVVTV 70
V RG SVV +
Sbjct: 100 VCRGTSVVLI 109
>gi|348673388|gb|EGZ13207.1| hypothetical protein PHYSODRAFT_334991 [Phytophthora sojae]
Length = 106
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 9/79 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL KY+D+++++K + R + GTL+G+DQ +NLV+D+ VE + ++ +G+
Sbjct: 18 DLAKYIDQEVRVKFHGGREVTGTLKGYDQLVNLVLDDCVEFLRDPNDEYRITDDTRKVGL 77
Query: 60 VVIRGNSVVTVEALEPVSK 78
VV RG SV+ V ++ ++
Sbjct: 78 VVCRGTSVMLVSPVDGTAE 96
>gi|67516971|ref|XP_658371.1| hypothetical protein AN0767.2 [Aspergillus nidulans FGSC A4]
gi|40746253|gb|EAA65409.1| hypothetical protein AN0767.2 [Aspergillus nidulans FGSC A4]
gi|259488955|tpe|CBF88826.1| TPA: small nuclear ribonucleoprotein (LSM7), putative
(AFU_orthologue; AFUA_1G14290) [Aspergillus nidulans
FGSC A4]
Length = 136
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++++K N R + G L+G+DQ MNLV+D+ E GNE +G++V R
Sbjct: 52 DLTKYMDKEVRVKFNGGREVSGILKGYDQLMNLVLDDVKESMRDDEGNETTRALGLIVAR 111
Query: 64 GNSVVTV 70
G +V +
Sbjct: 112 GTLIVLI 118
>gi|302786868|ref|XP_002975205.1| hypothetical protein SELMODRAFT_415303 [Selaginella
moellendorffii]
gi|302791693|ref|XP_002977613.1| hypothetical protein SELMODRAFT_417493 [Selaginella
moellendorffii]
gi|300154983|gb|EFJ21617.1| hypothetical protein SELMODRAFT_417493 [Selaginella
moellendorffii]
gi|300157364|gb|EFJ23990.1| hypothetical protein SELMODRAFT_415303 [Selaginella
moellendorffii]
Length = 101
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK + +KL+ R ++GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 10 DLAKFIDKGVCVKLSGGRQVIGTLKGYDQLLNLVLDEAVEYLRDHDDPLKTTDQTRALGL 69
Query: 60 VVIRGNSVVTV 70
VV RG +V+ V
Sbjct: 70 VVCRGTAVMLV 80
>gi|367010644|ref|XP_003679823.1| hypothetical protein TDEL_0B04830 [Torulaspora delbrueckii]
gi|359747481|emb|CCE90612.1| hypothetical protein TDEL_0B04830 [Torulaspora delbrueckii]
Length = 117
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 13/82 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY D K+++KL R++ G L+G+DQ MNLV+D T+E + ++ ++G
Sbjct: 31 DLAKYKDSKVRVKLMGGRLVTGILKGYDQLMNLVLDETLEYMRDPEDPSVILKDKTRELG 90
Query: 59 MVVIRGNSVVTVEALEPVSKSQ 80
++VIRG +++ L P S+
Sbjct: 91 LIVIRGTVLLS---LSPCDGSE 109
>gi|50309941|ref|XP_454984.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644119|emb|CAH00071.1| KLLA0E22881p [Kluyveromyces lactis]
Length = 110
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 49/76 (64%), Gaps = 10/76 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
+L +Y D ++++K R++ G L+G+D+ MNLV+D TVE ++ ++ IG
Sbjct: 28 NLAQYKDTEVRVKFIGGRLVTGILKGYDELMNLVLDETVEYARDPEDETIIHKDQAKKIG 87
Query: 59 MVVIRGNSVVTVEALE 74
+VVIRG +++++ +LE
Sbjct: 88 LVVIRGTALLSLCSLE 103
>gi|412993861|emb|CCO14372.1| U6 snRNA-associated Sm-like protein LSm7 [Bathycoccus prasinos]
Length = 119
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN---------GNEKNDIGM 59
DL KY+DK +++KL+ R + G L+GFDQ +NLV+D T E +E ++G+
Sbjct: 29 DLGKYIDKGVRVKLSGGREVEGILKGFDQLLNLVLDETKEYLRDVDDPLRITDETRNLGL 88
Query: 60 VVIRGNSVVTVEALE 74
+V RG SV+ V L+
Sbjct: 89 IVTRGTSVMVVSPLD 103
>gi|296808563|ref|XP_002844620.1| U6 snRNA binding protein [Arthroderma otae CBS 113480]
gi|238844103|gb|EEQ33765.1| U6 snRNA binding protein [Arthroderma otae CBS 113480]
Length = 155
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIR 63
DL KYMDK++ +K N R I G L+G+DQ MNLV+D+ E ++ ++I G++V R
Sbjct: 70 DLTKYMDKEVNVKFNGGREITGVLKGYDQLMNLVLDDVKETMRDDNDNITTRSLGLIVAR 129
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V L P S+
Sbjct: 130 GTLLV---LLSPADGSE 143
>gi|170097019|ref|XP_001879729.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645132|gb|EDR09380.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 99
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNT-VEVNGNEK-NDIGMVVIRGNS 66
DL KY+++K+++K R + G L+G+DQ +NLV+D E +GN K +G+VV+RG
Sbjct: 19 DLSKYVNEKIRVKFTGGREVTGILKGYDQLLNLVLDEVEEEASGNPKPRQLGLVVLRGP- 77
Query: 67 VVTVEALEPVSKSQ 80
T+ L PV S+
Sbjct: 78 --TITILSPVDGSE 89
>gi|296411623|ref|XP_002835529.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629315|emb|CAZ79686.1| unnamed protein product [Tuber melanosporum]
Length = 136
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKN-DIGMVVIR 63
DL K+MDK + +K N R +VG L+G+DQ MNLV+D+ E +GNE ++G+VV R
Sbjct: 52 DLAKFMDKAITVKFNGGREVVGILKGYDQLMNLVLDDVKENLRDEDGNETTRELGLVVAR 111
Query: 64 GNSVVTVEALE 74
G + + ++
Sbjct: 112 GPMLTLISPMD 122
>gi|340368632|ref|XP_003382855.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Amphimedon queenslandica]
Length = 108
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN---------DIGM 59
+L KY+DK++++K R G L+G+DQ +NLV+D +E + K+ +G+
Sbjct: 19 ELGKYLDKRIRVKFQGGRETSGILKGYDQLLNLVLDGAIEYLQDPKDQFKLTDETRSLGL 78
Query: 60 VVIRGNSVVTV---EALEPVS 77
VV RG +VV + + +EP++
Sbjct: 79 VVCRGTAVVLICPADTMEPIA 99
>gi|213404126|ref|XP_002172835.1| U6 snRNP-associated protein Lsm7 [Schizosaccharomyces japonicus
yFS275]
gi|212000882|gb|EEB06542.1| U6 snRNP-associated protein Lsm7 [Schizosaccharomyces japonicus
yFS275]
Length = 112
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL +Y D+++Q KL R I G L+G+DQ MNLV+D+ VE N + D +G+
Sbjct: 27 DLSRYQDQRIQAKLTGGRQISGVLKGYDQLMNLVLDD-VEENLRDPEDGRVLDETRKLGL 85
Query: 60 VVIRGNSVVTVEALE 74
VV+RG ++V + ++
Sbjct: 86 VVVRGTTLVLLAPMD 100
>gi|156847090|ref|XP_001646430.1| hypothetical protein Kpol_1048p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156117107|gb|EDO18572.1| hypothetical protein Kpol_1048p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 126
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY D K+++KL R++ G L+G+D M LV+D TVE + ++ D+G
Sbjct: 40 DLAKYKDTKIRVKLMGGRLVTGVLKGYDPLMTLVLDETVEYLRDLEDSSIILKDQTRDLG 99
Query: 59 MVVIRGNSVVTVEALEPVSKSQ 80
+ VIRG ++ +L PV S+
Sbjct: 100 LTVIRGTVLL---SLSPVDGSE 118
>gi|363754719|ref|XP_003647575.1| hypothetical protein Ecym_6383 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891212|gb|AET40758.1| hypothetical protein Ecym_6383 [Eremothecium cymbalariae
DBVPG#7215]
Length = 119
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 15/80 (18%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----------VNGNEKNDI 57
DL KY D K+++K+ R+++G L+G+D+ MNLV+D TVE + G +N +
Sbjct: 33 DLAKYKDTKVRVKVMGGRLVIGILKGYDELMNLVLDETVEYLRDEDDSSVILEGKTRN-L 91
Query: 58 GMVVIRGNSVVTVEALEPVS 77
G++VIRG +++ L PV+
Sbjct: 92 GLIVIRGTILLS---LSPVA 108
>gi|254585355|ref|XP_002498245.1| ZYRO0G05720p [Zygosaccharomyces rouxii]
gi|238941139|emb|CAR29312.1| ZYRO0G05720p [Zygosaccharomyces rouxii]
Length = 116
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 10/71 (14%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIGM 59
L KY D K+++KL R++VG L+G+DQ MNLV+D T+E + ++ ++G+
Sbjct: 31 LAKYKDTKVRVKLMGGRLVVGVLKGYDQLMNLVLDETIEYMRDPEDSSFILKDKTRELGL 90
Query: 60 VVIRGNSVVTV 70
+VIRG ++++
Sbjct: 91 IVIRGTVLLSL 101
>gi|170037644|ref|XP_001846666.1| SM protein G [Culex quinquefasciatus]
gi|167880950|gb|EDS44333.1| SM protein G [Culex quinquefasciatus]
Length = 130
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--------NGNEKNDIGMV 60
DL KY++K +++K R G L+G+D +NLV+DNTVE E +G+V
Sbjct: 43 DLSKYLEKTIRVKFAGGREAAGVLKGYDPLLNLVLDNTVEFLRDPDDYKLAEESRHLGLV 102
Query: 61 VIRGNSVVTV 70
V RG SVV +
Sbjct: 103 VCRGTSVVLI 112
>gi|281354384|gb|EFB29968.1| hypothetical protein PANDA_005106 [Ailuropoda melanoleuca]
Length = 54
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV 49
PP+LK +M KKL +KLN R + G L+GFD FM+LVI+ VE+
Sbjct: 5 HPPELKAFMGKKLSLKLNGGRHVQGILQGFDPFMDLVIEECVEM 48
>gi|156031032|ref|XP_001584841.1| hypothetical protein SS1G_14124 [Sclerotinia sclerotiorum 1980]
gi|154700515|gb|EDO00254.1| hypothetical protein SS1G_14124 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 138
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKND----IGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D+ E + +E N+ +G+VV R
Sbjct: 54 DLGKYMDKQVTVKFNGGRHVKGTLKGYDALMNLVLDDVEEKLTDDEGNEAWRALGLVVAR 113
Query: 64 GNSVVTVEALEPVSKSQ 80
G ++ + PV S+
Sbjct: 114 GTLLI---GISPVDGSE 127
>gi|242773724|ref|XP_002478297.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
stipitatus ATCC 10500]
gi|218721916|gb|EED21334.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
stipitatus ATCC 10500]
Length = 144
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + G L+G+DQ MNLV+D+ E +GNE +G++V R
Sbjct: 60 DLTKYMDKEVNVKFNGGREVSGILKGYDQLMNLVLDDVKEKMRDESGNETTRSLGLIVAR 119
Query: 64 GNSVVTV 70
G +V +
Sbjct: 120 GTLLVLI 126
>gi|260795474|ref|XP_002592730.1| hypothetical protein BRAFLDRAFT_118403 [Branchiostoma floridae]
gi|229277953|gb|EEN48741.1| hypothetical protein BRAFLDRAFT_118403 [Branchiostoma floridae]
Length = 116
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K + R G L+G+D +NLV+DNT E + + +G+
Sbjct: 28 DLSKYLDKPIRVKFHGGREASGVLKGYDPLLNLVLDNTTEYQRDPDDPFKLTEDTRQLGL 87
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 88 VVCRGTSVVLI 98
>gi|312375289|gb|EFR22689.1| hypothetical protein AND_14337 [Anopheles darlingi]
Length = 169
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--------NGNEKNDIGMV 60
DL KY++K +++K R G L+G+D +NLV+DNT+E ++ +G+V
Sbjct: 82 DLSKYLEKTIRVKFAGGREAAGVLKGYDPLLNLVLDNTIEFLRDPDDYKLADDTRHLGLV 141
Query: 61 VIRGNSVVTV 70
V RG SVV +
Sbjct: 142 VCRGTSVVLI 151
>gi|299740998|ref|XP_001834148.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
gi|298404507|gb|EAU87644.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
Length = 107
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKNDIGMVVIRG 64
DL KY+++K+++K R ++G L+G+DQ +NLV+D E N +K +G+VV+RG
Sbjct: 25 DLSKYVNEKIRVKFTGGREVIGVLKGYDQLLNLVLDEVEEEVSASNPYKKRSLGLVVLRG 84
Query: 65 NSVVTVEALEPV 76
T+ L PV
Sbjct: 85 P---TITLLSPV 93
>gi|443895126|dbj|GAC72472.1| hypothetical protein PANT_7d00115 [Pseudozyma antarctica T-34]
Length = 117
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-------NGNEKNDIGMVV 61
DL KY+D K+++K R + G L+GFDQ MNLV+D+ E G + ++G+VV
Sbjct: 32 DLTKYIDTKIRVKFAGGREVFGVLKGFDQLMNLVMDDVHEALRDADGNVGEKTRNLGLVV 91
Query: 62 IRGNSVVTV 70
+RG ++ +
Sbjct: 92 LRGTALTVI 100
>gi|388854666|emb|CCF51823.1| related to snRNP protein [Ustilago hordei]
Length = 142
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-------GMVV 61
DL KY+D+K+++K R + G L+GFDQ MNLV+D E +E+ ++ G+VV
Sbjct: 60 DLTKYIDQKIRVKFAGGREVFGILKGFDQLMNLVMDEVTESLRDEEGNVTDKTRSLGLVV 119
Query: 62 IRGNSVVTV 70
+RG ++ +
Sbjct: 120 LRGTALTVI 128
>gi|156383890|ref|XP_001633065.1| predicted protein [Nematostella vectensis]
gi|156220130|gb|EDO41002.1| predicted protein [Nematostella vectensis]
Length = 102
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +++K R G L+GFD +NLV+DNT+E +E +G+
Sbjct: 14 DLSKFLDKGVRVKFQGGREASGVLKGFDALLNLVLDNTIEYLRDPDDPLKLSDETRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG +VV V
Sbjct: 74 VVCRGTAVVLV 84
>gi|255082277|ref|XP_002508357.1| predicted protein [Micromonas sp. RCC299]
gi|226523633|gb|ACO69615.1| predicted protein [Micromonas sp. RCC299]
Length = 104
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +++KL R + GTL+GFDQ +NLV+D E ++ +G+
Sbjct: 10 DLGKFIDKGVRVKLAGGREVTGTLKGFDQLLNLVLDECEEYLRDPEDPLKVTDQTRSLGL 69
Query: 60 VVIRGNSVVTVEALE 74
+V RG SV+ V L+
Sbjct: 70 IVARGTSVMVVSGLD 84
>gi|116783136|gb|ABK22805.1| unknown [Picea sitchensis]
Length = 172
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 11/85 (12%)
Query: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN 52
MS +G P D L Y+DKKL + L R ++G LR FDQF N V++N +E + G+
Sbjct: 45 MSWAG-PEDIFLSTSLASYLDKKLLVLLRDGRKLIGILRSFDQFANAVLENALERIIVGD 103
Query: 53 EKND--IGMVVIRGNSVVTVEALEP 75
D +G+ VIRG +VV + L+P
Sbjct: 104 LYCDLPLGLYVIRGENVVLIGELDP 128
>gi|392580035|gb|EIW73162.1| hypothetical protein TREMEDRAFT_24108, partial [Tremella
mesenterica DSM 1558]
Length = 79
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDIGMVVIRGNS 66
+L Y+DK +++K R + GTL+GFDQ MNLV+D+ VE NG +G+VV+RG +
Sbjct: 10 NLANYVDKSIRVKFMGAREVTGTLKGFDQLMNLVMDDVVEEFENGMPSRSLGLVVLRGPN 69
Query: 67 VVTV 70
+ +
Sbjct: 70 ITLI 73
>gi|164661255|ref|XP_001731750.1| hypothetical protein MGL_1018 [Malassezia globosa CBS 7966]
gi|159105651|gb|EDP44536.1| hypothetical protein MGL_1018 [Malassezia globosa CBS 7966]
Length = 130
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 48/74 (64%), Gaps = 8/74 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-----NGN---EKNDIGMV 60
+L KY+DK++++K R +VGTL+G+DQ M LV+D+ E+ NGN E+ +G+
Sbjct: 44 NLAKYVDKEIRVKFMGGREVVGTLKGYDQLMTLVMDDVEEIKHDPSNGNTTGERRTLGLA 103
Query: 61 VIRGNSVVTVEALE 74
V+RG ++ + ++
Sbjct: 104 VLRGTNLTLISPVD 117
>gi|17544592|ref|NP_502034.1| Protein LSM-7 [Caenorhabditis elegans]
gi|3881724|emb|CAA93428.1| Protein LSM-7 [Caenorhabditis elegans]
Length = 104
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL +++DK++++K R G LRGFDQ +N+V+D+ E V G+E +G+
Sbjct: 15 DLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVVGDETRQLGL 74
Query: 60 VVIRGNSVVTV 70
+V RG ++ V
Sbjct: 75 IVARGTAITVV 85
>gi|367004679|ref|XP_003687072.1| hypothetical protein TPHA_0I01310 [Tetrapisispora phaffii CBS 4417]
gi|357525375|emb|CCE64638.1| hypothetical protein TPHA_0I01310 [Tetrapisispora phaffii CBS 4417]
Length = 120
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY D +++++L R++ G L+G+D MNLVIDN +E V EK ++G
Sbjct: 34 DLGKYKDTEVRVELMGGRLVTGILKGYDSLMNLVIDNAIEYVKGLDDQVDVGKEEKRELG 93
Query: 59 MVVIRGNSVVTVEALEPVSKS 79
+ V+RG + ++ PV S
Sbjct: 94 LTVVRGT---VLSSISPVDGS 111
>gi|327294916|ref|XP_003232153.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326465325|gb|EGD90778.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 147
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIR 63
DL KYMDK++ +K N R + G L+G+DQ MNLV+D+ E ++ +++ G++V R
Sbjct: 62 DLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRDDNDNVTTRSLGLIVAR 121
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V L P S+
Sbjct: 122 GTLLV---LLSPADGSE 135
>gi|221219684|gb|ACM08503.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 126
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK++++K R G L+GFD +NLV+D+T+E + + +G+
Sbjct: 18 DLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQLGL 77
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 78 VVCRGTSVVLI 88
>gi|307107960|gb|EFN56201.1| hypothetical protein CHLNCDRAFT_22477 [Chlorella variabilis]
Length = 101
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +++KL R +VG L+G+DQ +NLV+D VE ++ +G+
Sbjct: 11 DLAKFVDKSIRVKLAGGREVVGVLKGYDQLLNLVLDEAVEYLRDPEDPMRVTDQTRPMGL 70
Query: 60 VVIRGNSVVTV 70
+V RG SV+ V
Sbjct: 71 IVCRGTSVMLV 81
>gi|119630086|gb|EAX09681.1| hCG1812837 [Homo sapiens]
Length = 56
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 20 IKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNSVVTVEALE 74
+K N R + G L G D FMNLVID VE++ + ++N IG VVI+GNS++ +E LE
Sbjct: 1 MKCNGGRHVQGILWGLDPFMNLVIDECVEMSTSWQQNSIGTVVIQGNSIIILETLE 56
>gi|326473412|gb|EGD97421.1| small nuclear ribonucleoprotein [Trichophyton tonsurans CBS 112818]
gi|326481892|gb|EGE05902.1| small nuclear ribonucleoprotein LSM7 [Trichophyton equinum CBS
127.97]
Length = 154
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIR 63
DL KYMDK++ +K N R + G L+G+DQ MNLV+D+ E ++ +++ G++V R
Sbjct: 69 DLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRDDNDNVTTRSLGLIVAR 128
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V L P S+
Sbjct: 129 GTLLV---LLSPADGSE 142
>gi|32401287|gb|AAP80816.1| U6 snRNA-associated Sm-like protein LSm7 [Griffithsia japonica]
Length = 110
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 11/80 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY DK + ++L R + G L+G+D +NLV+D VE ++G E+ +G
Sbjct: 21 DLSKYSDKDVIVRLAGGRQVRGVLKGWDPLLNLVLDEVVEQLRDVDDSYRLSGKERK-LG 79
Query: 59 MVVIRGNSVVTVEALEPVSK 78
+VV+RG SV+TV ++ V +
Sbjct: 80 LVVVRGTSVMTVSPVDGVEQ 99
>gi|294657422|ref|XP_459729.2| DEHA2E09724p [Debaryomyces hansenii CBS767]
gi|199432680|emb|CAG87965.2| DEHA2E09724p [Debaryomyces hansenii CBS767]
Length = 122
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL Y DK++++K R ++G L+GFDQ MNLV+++ E V ++ DIG
Sbjct: 34 DLNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENIRDPEDDNVLTDKTRDIGF 93
Query: 60 VVIRGNSVVTVEALE 74
VV+RG S++T+ ++
Sbjct: 94 VVVRGPSLLTISPVD 108
>gi|315043418|ref|XP_003171085.1| RH73529p [Arthroderma gypseum CBS 118893]
gi|311344874|gb|EFR04077.1| RH73529p [Arthroderma gypseum CBS 118893]
Length = 151
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIR 63
DL KYMDK++ +K N R + G L+G+DQ MNLV+D+ E ++ +++ G++V R
Sbjct: 66 DLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRDDNDNVTTRSLGLIVAR 125
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V L P S+
Sbjct: 126 GTLLV---LLSPADGSE 139
>gi|443684081|gb|ELT88113.1| hypothetical protein CAPTEDRAFT_124620, partial [Capitella
teleta]
Length = 100
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 14/82 (17%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND----------IG 58
DL KY+DK +++K + R G L+GFD +NLV+D E N + +D +G
Sbjct: 12 DLSKYLDKPVRVKFSGGREACGILKGFDPLLNLVLDGCTE-NLRDPDDPFKLTEDTRPLG 70
Query: 59 MVVIRGNSVVTV---EALEPVS 77
+VV RGNSVV + E +E ++
Sbjct: 71 LVVCRGNSVVLICPEEGMESIA 92
>gi|308491262|ref|XP_003107822.1| CRE-LSM-7 protein [Caenorhabditis remanei]
gi|308249769|gb|EFO93721.1| CRE-LSM-7 protein [Caenorhabditis remanei]
Length = 103
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL +++DK++++K R G LRGFDQ +N+V+D+ E V G+E +G+
Sbjct: 15 DLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVVGDETRPLGL 74
Query: 60 VVIRGNSVVTV 70
+V RG ++ V
Sbjct: 75 IVARGTAITVV 85
>gi|118789320|ref|XP_317337.3| AGAP008122-PA [Anopheles gambiae str. PEST]
gi|116123162|gb|EAA12576.3| AGAP008122-PA [Anopheles gambiae str. PEST]
Length = 126
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--------NGNEKNDIGMV 60
DL KY++K +++K R G L+G+D +NLV+DNT+E ++ +G+V
Sbjct: 39 DLSKYLEKTIRVKFAGGREAAGVLKGYDPLLNLVLDNTIEFLRDPDDYKLADDTRHLGLV 98
Query: 61 VIRGNSVVTV 70
V RG SVV +
Sbjct: 99 VCRGTSVVLI 108
>gi|268536210|ref|XP_002633240.1| C. briggsae CBR-LSM-7 protein [Caenorhabditis briggsae]
Length = 103
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL +++DK++++K R G LRGFDQ +N+V+D+ E V G+E +G+
Sbjct: 15 DLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVIGDETRPLGL 74
Query: 60 VVIRGNSVVTV 70
+V RG ++ V
Sbjct: 75 IVARGTAITVV 85
>gi|19075840|ref|NP_588340.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74626865|sp|O74499.1|LSM7_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|3581912|emb|CAA20851.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe]
Length = 113
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN--------DIGMV 60
DL +Y D+++Q R I G L+GFDQ MNLV+D+ E N ++ +G+V
Sbjct: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86
Query: 61 VIRGNSVVTVEALE 74
V+RG ++V + ++
Sbjct: 87 VVRGTTLVLIAPMD 100
>gi|86196664|gb|EAQ71302.1| hypothetical protein MGCH7_ch7g709 [Magnaporthe oryzae 70-15]
Length = 82
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 8/72 (11%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIRGNSVV 68
MDK++Q+K N R ++GTL+G+D MNLV+D E GNE + +G+VV+RG +V
Sbjct: 1 MDKEVQVKFNGGREVIGTLKGYDALMNLVLDEVKETMRDEEGNESSRPLGLVVVRGTLLV 60
Query: 69 TVEALEPVSKSQ 80
A+ P S+
Sbjct: 61 ---AISPTDGSE 69
>gi|430812263|emb|CCJ30291.1| unnamed protein product [Pneumocystis jirovecii]
Length = 121
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 10/79 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGN---EKNDIGMVV 61
DL KY D+K+++K R IVG L+G+D MNLV+D +E +GN +K +G+VV
Sbjct: 34 DLAKYKDQKVRVKFAGGREIVGILKGYDLLMNLVLDEVIENLRDEDGNITDQKRQLGLVV 93
Query: 62 IRGNSVVTVEALEPVSKSQ 80
IRG +++ P+ S+
Sbjct: 94 IRGTTLI---LFSPIDGSE 109
>gi|354459631|pdb|3SWN|C Chain C, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459634|pdb|3SWN|F Chain F, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459637|pdb|3SWN|O Chain O, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
gi|354459640|pdb|3SWN|R Chain R, Structure Of The Lsm657 Complex: An Assembly Intermediate
Of The Lsm1 7 And Lsm2 8 Rings
Length = 117
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 8/74 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN--------DIGMV 60
DL +Y D+++Q R I G L+GFDQ MNLV+D+ E N ++ +G+V
Sbjct: 31 DLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 90
Query: 61 VIRGNSVVTVEALE 74
V+RG ++V + ++
Sbjct: 91 VVRGTTLVLIAPMD 104
>gi|321464723|gb|EFX75729.1| hypothetical protein DAPPUDRAFT_306642 [Daphnia pulex]
Length = 116
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL +YMDK +++K R G L+G+D +N+V+DNTVE + ++ +G+
Sbjct: 29 DLSRYMDKLIRVKFTGGREAAGILKGYDPLLNIVLDNTVEYLRDSEDSFKLSEDTRQLGL 88
Query: 60 VVIRGNSVVTV 70
VV RG +VV +
Sbjct: 89 VVCRGTAVVLI 99
>gi|154288569|ref|XP_001545066.1| hypothetical protein BC1G_16433 [Botryotinia fuckeliana B05.10]
gi|347835616|emb|CCD50188.1| hypothetical protein [Botryotinia fuckeliana]
Length = 140
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEK-NDIGMVVIR 63
DL KYMDK++ +K N R + GTL+G+D MNLV+D+ E G E +G+VV R
Sbjct: 56 DLGKYMDKQVTVKFNGGRHVKGTLKGYDALMNLVLDDVEEKLTDDEGTEAWRSLGLVVAR 115
Query: 64 GNSVVTVEALEPVSKSQ 80
G ++ + PV S+
Sbjct: 116 GTLLI---GISPVDGSE 129
>gi|313223467|emb|CBY40440.1| unnamed protein product [Oikopleura dioica]
gi|313234485|emb|CBY10442.1| unnamed protein product [Oikopleura dioica]
Length = 106
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
+L KY++K +++K R G L+G+DQ +NLVID+T E +E ++G+
Sbjct: 20 ELNKYLEKAIRVKFQGGREASGILKGYDQLLNLVIDSTTEHLRDADDPFRPSSESRNLGL 79
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 80 VVCRGTSVVLI 90
>gi|395831650|ref|XP_003788908.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Otolemur
garnettii]
Length = 168
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 79 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 138
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 139 VVCRGTSVVLI 149
>gi|440467485|gb|ELQ36705.1| hypothetical protein OOU_Y34scaffold00645g12 [Magnaporthe oryzae
Y34]
Length = 191
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV 49
DL KYMDK++Q+K N R ++GTL+G+D MNLV+D E
Sbjct: 60 DLAKYMDKEVQVKFNGGREVIGTLKGYDALMNLVLDEVKET 100
>gi|221221276|gb|ACM09299.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 107
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK++++K R G L+GFD +NLV+D+T+E + + +G+
Sbjct: 18 DLSKYLDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQLGL 77
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 78 VVCRGTSVVLI 88
>gi|388580059|gb|EIM20377.1| U6 snRNA-associated Sm-like protein LSm7 [Wallemia sebi CBS
633.66]
Length = 98
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGNS 66
DL +++D+ L++K R G L+G+DQ MNLV+D+ VE+ +G+ + +G+VV+RG +
Sbjct: 20 DLSRFVDQSLRLKFQGGREATGILKGYDQLMNLVMDDVVEILQDGSSRT-LGLVVLRGPA 78
Query: 67 VVTV 70
+ +
Sbjct: 79 ITVI 82
>gi|66804897|ref|XP_636181.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74852197|sp|Q54HF6.1|LSM7_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm7
gi|60464543|gb|EAL62681.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 97
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 12/80 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL+K++ K++ +K R + G L+G+DQ +N+ +D T E + +EK +G+
Sbjct: 14 DLQKFLGKEICVKFTGGREVQGILKGYDQLVNITLDQTQEFIRDAEDPLITTDEKRFLGL 73
Query: 60 VVIRGNSVVTV---EALEPV 76
VV RG+SV+ V E EP+
Sbjct: 74 VVCRGSSVMMVCPTEGCEPI 93
>gi|325188073|emb|CCA22616.1| U6 snRNAassociated Smlike protein putative [Albugo laibachii Nc14]
Length = 119
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 20/92 (21%)
Query: 2 SRSGQPP---------DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN 52
S S PP DL KY+D + +K R + GTL+G+DQ +NLV+D +E
Sbjct: 15 SESNAPPFVVRKENILDLDKYIDHSVCVKFRGGRQVHGTLKGYDQLVNLVLDECIEF-LR 73
Query: 53 EKND----------IGMVVIRGNSVVTVEALE 74
E ND IG+VV RG +V+ + ++
Sbjct: 74 EDNDSYRLSDKTRSIGLVVCRGTTVMLISPVD 105
>gi|355702951|gb|EHH29442.1| U6 snRNA-associated Sm-like protein LSm7 [Macaca mulatta]
Length = 122
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 33 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 92
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 93 VVCRGTSVVLI 103
>gi|348549932|ref|XP_003460787.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Cavia
porcellus]
Length = 154
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 65 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 124
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 125 VVCRGTSVVLI 135
>gi|344301861|gb|EGW32166.1| hypothetical protein SPAPADRAFT_61256 [Spathaspora passalidarum
NRRL Y-27907]
Length = 129
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL KY +++++K R I G L+GFDQ MNLV++N E V E D+G+
Sbjct: 40 DLNKYKHQEIKVKFVGGRQITGVLKGFDQLMNLVLENVKEQLRDPEDDTVLTKETRDLGL 99
Query: 60 VVIRGNSVVTV 70
VV+R S++T+
Sbjct: 100 VVVRCTSLLTI 110
>gi|398407359|ref|XP_003855145.1| hypothetical protein MYCGRDRAFT_55886 [Zymoseptoria tritici
IPO323]
gi|339475029|gb|EGP90121.1| hypothetical protein MYCGRDRAFT_55886 [Zymoseptoria tritici
IPO323]
Length = 83
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND-----IGMVVIRGNSVV 68
MDK + +K N R + GTL+G+DQ MNLV+DN E+ +E+ + +G++V+RG +V
Sbjct: 1 MDKDINVKFNGGREVTGTLKGYDQLMNLVLDNVKEMTRDEEGNTSSRSLGLLVVRGTLLV 60
Query: 69 TVEALE 74
+ L+
Sbjct: 61 LISPLD 66
>gi|301781078|ref|XP_002925960.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Ailuropoda melanoleuca]
Length = 110
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D TVE + + +G+
Sbjct: 21 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTVEYMRDPDDQYKLTEDTRQLGL 80
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 81 VVCRGTSVVLI 91
>gi|402220188|gb|EJU00260.1| U6 snRNA-associated Sm-like protein LSm7 [Dacryopinax sp. DJM-731
SS1]
Length = 120
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE---KNDIGMVVIRGN 65
DL KY ++++K R + G L+GFDQ MNLV+D+ VE +E + ++G+VV+RG
Sbjct: 38 DLAKYESMRIRVKFQGGREVTGVLKGFDQLMNLVLDDVVENLSSEPPKQRNLGLVVLRGP 97
Query: 66 SVVTVEALEPV 76
T+ L PV
Sbjct: 98 ---TITLLSPV 105
>gi|449685039|ref|XP_004210789.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Hydra magnipapillata]
gi|449685041|ref|XP_004210790.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Hydra magnipapillata]
gi|449685043|ref|XP_004210791.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
3 [Hydra magnipapillata]
gi|449685045|ref|XP_004210792.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
4 [Hydra magnipapillata]
Length = 102
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL ++MDK +++K + R + G L+GFD +N+V+DN E + +G+
Sbjct: 14 DLTRFMDKAIRVKFSGGREVAGVLKGFDHLLNIVLDNCTEFIRDPDDPYKLSEDTRSLGI 73
Query: 60 VVIRGNSVV---TVEALEPVS 77
VV RG ++V VE +E ++
Sbjct: 74 VVCRGTAIVLICPVEGMEAIA 94
>gi|407919352|gb|EKG12602.1| hypothetical protein MPH_10268 [Macrophomina phaseolina MS6]
Length = 81
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIRGNSVV 68
MDK + +K N R + GTL+G+DQ MNLV+D+ EV GNE +G++V RG +V
Sbjct: 1 MDKGISVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDEGNETTRSLGLIVARGTLLV 60
Query: 69 TVEALE 74
+ L+
Sbjct: 61 LISPLD 66
>gi|340059633|emb|CCC54026.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma vivax Y486]
Length = 81
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 6/73 (8%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG------NEKNDIGMVV 61
P+L +M+K++ +KL R + G LRG DQFM++V+ + V+ + EK +G+ V
Sbjct: 8 PNLNHFMEKRVMLKLQGGRSVSGELRGVDQFMSVVLHDAVDESQRGSDSEGEKTPLGVAV 67
Query: 62 IRGNSVVTVEALE 74
IRG+ +V + LE
Sbjct: 68 IRGSMIVDIIGLE 80
>gi|221221360|gb|ACM09341.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|225705016|gb|ACO08354.1| U6 snRNA-associated Sm-like protein LSm7 [Oncorhynchus mykiss]
Length = 107
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK++++K R G L+GFD +NLV+D+T+E + + +G+
Sbjct: 18 DLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQLGL 77
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 78 VVCRGTSVVLI 88
>gi|212531689|ref|XP_002146001.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
marneffei ATCC 18224]
gi|210071365|gb|EEA25454.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
marneffei ATCC 18224]
Length = 150
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKN-DIGMVVIR 63
DL KYMDK++ +K N R + G L+G+DQ MNLV+D+ E +G E +G++V R
Sbjct: 66 DLTKYMDKEVIVKFNGGREVSGILKGYDQLMNLVLDDVKEKMRDESGKEATRSLGLIVAR 125
Query: 64 GNSVVTV 70
G +V +
Sbjct: 126 GTLLVLI 132
>gi|449682170|ref|XP_002165913.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Hydra
magnipapillata]
Length = 133
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL ++MDK +++K + R + G L+GFD +N+V+DN E + +G+
Sbjct: 45 DLTRFMDKAIRVKFSGGREVAGVLKGFDHLLNIVLDNCTEFIRDPDDPYKLSEDTRSLGI 104
Query: 60 VVIRGNSVVT---VEALEPVS 77
VV RG ++V VE +E ++
Sbjct: 105 VVCRGTAIVLICPVEGMEAIA 125
>gi|449018263|dbj|BAM81665.1| similar to Sm protein G [Cyanidioschyzon merolae strain 10D]
Length = 100
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVV 68
+L+ + +Q+ LNANR + G L GFD + NLV+ + ++ + +G V IRGNSVV
Sbjct: 10 ELEALLFHSVQVYLNANRCVRGKLSGFDHYANLVLSDALDCRTGAQ--LGQVWIRGNSVV 67
Query: 69 TVEALEPV 76
+V+ L V
Sbjct: 68 SVDLLRDV 75
>gi|405951657|gb|EKC19551.1| U6 snRNA-associated Sm-like protein LSm7 [Crassostrea gigas]
gi|405960030|gb|EKC25982.1| U6 snRNA-associated Sm-like protein LSm7 [Crassostrea gigas]
Length = 113
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K + R G L+G+D +NLV+D+T E + + +G+
Sbjct: 26 DLAKYLDKTIRVKFSGGREAAGVLKGYDPLLNLVLDDTTEYLRDPDDPYKLTEDTRTLGL 85
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 86 VVCRGTSVVLI 96
>gi|119589795|gb|EAW69389.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
Length = 128
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 39 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 98
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 99 VVCRGTSVVLI 109
>gi|393219456|gb|EJD04943.1| U6 snRNA-associated Sm-like protein LSm7 [Fomitiporia mediterranea
MF3/22]
Length = 134
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE----KNDIGMVVIRG 64
DL+KYM++++++K R + G L+G+DQ +NLV+D+ VE +E K +G+VV+RG
Sbjct: 52 DLQKYMNERIRVKFTGGREVTGILKGYDQLLNLVLDD-VEEQLHEPEPRKRSLGLVVLRG 110
Query: 65 NSVVTVEALEPV 76
T+ L PV
Sbjct: 111 P---TITLLNPV 119
>gi|391342642|ref|XP_003745625.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Metaseiulus occidentalis]
Length = 116
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R + G L+G+D +NLV+DNT E + + +G+
Sbjct: 31 DLSKYLDKLIRVKFQGGREVTGVLKGYDPLLNLVMDNTTEFLRDPDDHLKLTEDTRSLGL 90
Query: 60 VVIRGNSVVTVE 71
VV RG +++ V
Sbjct: 91 VVCRGPTIIIVH 102
>gi|344306981|ref|XP_003422161.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Loxodonta
africana]
Length = 132
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 43 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 102
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 103 VVCRGTSVVLI 113
>gi|387016782|gb|AFJ50510.1| u6 snRNA-associated Sm-like protein LSm7-like [Crotalus
adamanteus]
Length = 103
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D TVE + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTVEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|159490830|ref|XP_001703376.1| small nuclear riboprotein, U6 sm-like protein [Chlamydomonas
reinhardtii]
gi|158280300|gb|EDP06058.1| small nuclear riboprotein, U6 sm-like protein [Chlamydomonas
reinhardtii]
Length = 109
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL K++DK +++KL R + G L+G+DQ +NLVID VE +E +G+
Sbjct: 11 DLAKFIDKGVRVKLAGGREVQGILKGYDQLLNLVIDEAVEYLRDPEDPLTVTDETRSLGL 70
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 71 LVCRGTAVMLV 81
>gi|221221528|gb|ACM09425.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 111
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK++++K R G L+GFD +NLV+D+T+E + + +G+
Sbjct: 22 DLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQLGL 81
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 82 VVCRGTSVVLI 92
>gi|429847940|gb|ELA23485.1| u6 snrna-associated protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 136
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 10/77 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIR 63
DL KYMDK++ +K N + GTL+G+D MNLV+D EV GNE +G+VV R
Sbjct: 53 DLSKYMDKQITVKFNGG--LTGTLKGYDALMNLVLDEVQEVMRDEEGNETTRPLGLVVAR 110
Query: 64 GNSVVTVEALEPVSKSQ 80
G +V V PV S+
Sbjct: 111 GTLLVLV---SPVDGSE 124
>gi|148699535|gb|EDL31482.1| mCG12127, isoform CRA_c [Mus musculus]
Length = 139
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 50 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYKLTEDTRQLGL 109
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 110 VVCRGTSVVLI 120
>gi|213514586|ref|NP_001134195.1| LSM7 homolog, U6 small nuclear RNA associated [Salmo salar]
gi|209731384|gb|ACI66561.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|209732196|gb|ACI66967.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|209733656|gb|ACI67697.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|209737242|gb|ACI69490.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|225705702|gb|ACO08697.1| U6 snRNA-associated Sm-like protein LSm7 [Oncorhynchus mykiss]
gi|290563094|gb|ADD38941.1| U6 snRNA-associated Sm-like protein LSm7 [Lepeophtheirus
salmonis]
gi|303667107|gb|ADM16255.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 111
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK++++K R G L+GFD +NLV+D+T+E + + +G+
Sbjct: 22 DLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQLGL 81
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 82 VVCRGTSVVLI 92
>gi|284413764|ref|NP_001165133.1| LSM7 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
Length = 103
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKAIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|169647969|gb|ACA61986.1| CG13277 [Drosophila melanogaster]
gi|169647971|gb|ACA61987.1| CG13277 [Drosophila melanogaster]
gi|169647973|gb|ACA61988.1| CG13277 [Drosophila melanogaster]
gi|169647975|gb|ACA61989.1| CG13277 [Drosophila melanogaster]
gi|169647977|gb|ACA61990.1| CG13277 [Drosophila melanogaster]
gi|169647979|gb|ACA61991.1| CG13277 [Drosophila melanogaster]
gi|169647981|gb|ACA61992.1| CG13277 [Drosophila melanogaster]
gi|169647983|gb|ACA61993.1| CG13277 [Drosophila melanogaster]
gi|169647985|gb|ACA61994.1| CG13277 [Drosophila melanogaster]
gi|169647989|gb|ACA61996.1| CG13277 [Drosophila melanogaster]
gi|169647991|gb|ACA61997.1| CG13277 [Drosophila melanogaster]
gi|169647995|gb|ACA61999.1| CG13277 [Drosophila melanogaster]
gi|169647997|gb|ACA62000.1| CG13277 [Drosophila melanogaster]
gi|169647999|gb|ACA62001.1| CG13277 [Drosophila melanogaster]
gi|169648003|gb|ACA62003.1| CG13277 [Drosophila melanogaster]
gi|169648005|gb|ACA62004.1| CG13277 [Drosophila melanogaster]
gi|169648007|gb|ACA62005.1| CG13277 [Drosophila melanogaster]
gi|169648009|gb|ACA62006.1| CG13277 [Drosophila melanogaster]
gi|169648013|gb|ACA62008.1| CG13277 [Drosophila melanogaster]
gi|169648017|gb|ACA62010.1| CG13277 [Drosophila melanogaster]
gi|169648019|gb|ACA62011.1| CG13277 [Drosophila melanogaster]
gi|169648021|gb|ACA62012.1| CG13277 [Drosophila melanogaster]
gi|169648023|gb|ACA62013.1| CG13277 [Drosophila melanogaster]
gi|169648025|gb|ACA62014.1| CG13277 [Drosophila melanogaster]
gi|169648027|gb|ACA62015.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 11 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLG 70
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 71 LVVCRGTALVLI 82
>gi|225711338|gb|ACO11515.1| U6 snRNA-associated Sm-like protein LSm7 [Caligus rogercresseyi]
Length = 111
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK++++K R G L+GFD +NLV+D+T+E + + +G+
Sbjct: 22 DLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQLGL 81
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 82 VVCRGTSVVLI 92
>gi|169648001|gb|ACA62002.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 11 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLG 70
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 71 LVVCRGTALVLI 82
>gi|73987505|ref|XP_854995.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Canis lupus
familiaris]
gi|410949919|ref|XP_003981664.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Felis catus]
Length = 103
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D TVE + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTVEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|149034483|gb|EDL89220.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_e [Rattus norvegicus]
Length = 141
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 52 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 111
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 112 VVCRGTSVVLI 122
>gi|225717318|gb|ACO14505.1| U6 snRNA-associated Sm-like protein LSm7 [Esox lucius]
Length = 111
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK++++K R G L+GFD +NLV+D+T+E + + +G+
Sbjct: 22 DLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLRDPDDQFKLTEDTRQLGL 81
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 82 VVCRGTSVVLI 92
>gi|410921512|ref|XP_003974227.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Takifugu rubripes]
Length = 103
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQMKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|358370068|dbj|GAA86680.1| small nuclear ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 153
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 22/84 (26%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV------------------- 49
DL KYMDK++++K N R +VG L+G+DQ MNLV+D+ E
Sbjct: 52 DLNKYMDKEVRVKFNGGREVVGLLKGYDQLMNLVLDDVKESMRGKPLQQSPHYYSLLTLP 111
Query: 50 --NGNEKN-DIGMVVIRGNSVVTV 70
GNE +G+VV RG +V +
Sbjct: 112 DDEGNENTRSLGLVVARGTIIVLI 135
>gi|452822117|gb|EME29139.1| U6 snRNA-associated Sm-like protein LSm7 [Galdieria sulphuraria]
Length = 108
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
D+ KY+D ++ ++L R + G LRG+D +NLV+D VE +++ +G+
Sbjct: 20 DVSKYLDVRVYVRLLGGRQVSGILRGWDPLVNLVLDEAVEQLRDPEDPYKTTDKERKLGL 79
Query: 60 VVIRGNSVVTVEALE 74
VVIRG S+V+V +E
Sbjct: 80 VVIRGTSLVSVYPVE 94
>gi|47225688|emb|CAG08031.1| unnamed protein product [Tetraodon nigroviridis]
Length = 102
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQMKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|126137239|ref|XP_001385143.1| hypothetical protein PICST_46810 [Scheffersomyces stipitis CBS
6054]
gi|126092365|gb|ABN67114.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 109
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-------VNGNEKNDIGMVV 61
DL KY D+ +++K R + G LRGFDQ MNLV+D+ E + E +G VV
Sbjct: 23 DLNKYKDQVIRVKFIGGRHVTGVLRGFDQLMNLVLDDVTETLRDDDSILTKETRQLGFVV 82
Query: 62 IRGNSVVTV 70
+R S++T+
Sbjct: 83 VRCTSLLTI 91
>gi|332374862|gb|AEE62572.1| unknown [Dendroctonus ponderosae]
Length = 116
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL KY++K +++K R G L+G+D +NLV+DNT+E + ++G+
Sbjct: 29 DLSKYLEKTIRVKFAGGREASGILKGYDPLLNLVLDNTIEYLRDPDDPYKLAEDTRELGL 88
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 89 VVCRGTSVVLI 99
>gi|114158715|ref|NP_001041471.1| LSM7 homolog, U6 small nuclear RNA associated [Danio rerio]
gi|133778786|gb|AAI33958.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Danio rerio]
Length = 103
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|70996088|ref|XP_752799.1| small nuclear ribonucleoprotein (LSM7) [Aspergillus fumigatus
Af293]
gi|44890026|emb|CAF32144.1| u6 snrna-associated sm-like protein, putative [Aspergillus
fumigatus]
gi|66850434|gb|EAL90761.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
fumigatus Af293]
gi|159131553|gb|EDP56666.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
fumigatus A1163]
Length = 134
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNSV 67
DL KYMDK++++K N R + G L+G+DQ MNLV+D+ E + G NDI + NS
Sbjct: 54 DLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRGKSLNDITKLDEVSNSA 113
Query: 68 VTV 70
+ +
Sbjct: 114 IQM 116
>gi|432853545|ref|XP_004067760.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Oryzias
latipes]
Length = 103
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQLKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|148231641|ref|NP_001086126.1| LSM7 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|49522817|gb|AAH74231.1| MGC83430 protein [Xenopus laevis]
Length = 103
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|307111678|gb|EFN59912.1| hypothetical protein CHLNCDRAFT_132948 [Chlorella variabilis]
Length = 101
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKN 55
MS G L +Y+D + + N R IVGTLRG+DQ NL++D E NG E+
Sbjct: 1 MSAPGGDAGLAQYVDTTVSVITNDGRTIVGTLRGYDQATNLILDECHERVYSSKNGVEQL 60
Query: 56 DIGMVVIRGNSVVTVEALE 74
+G+ VIRG+++ + ++
Sbjct: 61 VLGLYVIRGDNIAVIGEID 79
>gi|431922251|gb|ELK19342.1| U6 snRNA-associated Sm-like protein LSm7 [Pteropus alecto]
Length = 103
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|224087215|ref|XP_002189612.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Taeniopygia
guttata]
Length = 115
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 26 DLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQFKLTEDTRQLGL 85
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 86 VVCRGTSVVLI 96
>gi|169647993|gb|ACA61998.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 11 DLSKYLEKQIRVKFAGGREAPGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLG 70
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 71 LVVCRGTALVLI 82
>gi|348504874|ref|XP_003439986.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Oreochromis niloticus]
Length = 103
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQLKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|242009022|ref|XP_002425292.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212509057|gb|EEB12554.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 109
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL KY++K +++K R G L+GFD +NLV+DNT E + + +G+
Sbjct: 21 DLSKYLEKSIRVKFAGGREAAGILKGFDPLLNLVLDNTTEFLRDPDDSYKLTVDTRMLGL 80
Query: 60 VVIRGNSVVTV---EALEPVS 77
VV RG SVV + + +E +S
Sbjct: 81 VVCRGTSVVLICPTDGMESIS 101
>gi|432116914|gb|ELK37501.1| U6 snRNA-associated Sm-like protein LSm7, partial [Myotis
davidii]
Length = 101
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 12 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 71
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 72 VVCRGTSVVLI 82
>gi|440912172|gb|ELR61764.1| U6 snRNA-associated Sm-like protein LSm7, partial [Bos grunniens
mutus]
Length = 113
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 24 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 83
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 84 VVCRGTSVVLI 94
>gi|354480892|ref|XP_003502637.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Cricetulus griseus]
gi|344243439|gb|EGV99542.1| U6 snRNA-associated Sm-like protein LSm7 [Cricetulus griseus]
Length = 104
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 15 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 74
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 75 VVCRGTSVVLI 85
>gi|169648011|gb|ACA62007.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 11 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLG 70
Query: 59 MVVIRGNSVVTV 70
+VV RG +++ +
Sbjct: 71 LVVCRGTALILI 82
>gi|7706423|ref|NP_057283.1| U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]
gi|219804601|ref|NP_001137334.1| U6 snRNA-associated Sm-like protein LSm7 [Bos taurus]
gi|114674535|ref|XP_512258.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Pan
troglodytes]
gi|311248306|ref|XP_003123072.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Sus
scrofa]
gi|332255874|ref|XP_003277052.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Nomascus
leucogenys]
gi|397496951|ref|XP_003819284.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Pan
paniscus]
gi|402903635|ref|XP_003914668.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Papio
anubis]
gi|403273733|ref|XP_003928656.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Saimiri
boliviensis boliviensis]
gi|426229199|ref|XP_004008679.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Ovis aries]
gi|426386553|ref|XP_004059748.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Gorilla
gorilla gorilla]
gi|10720075|sp|Q9UK45.1|LSM7_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|5919155|gb|AAD56231.1|AF182293_1 U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]
gi|12018382|gb|AAG45442.1|AC005258_2 U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]
gi|17391362|gb|AAH18621.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|123996969|gb|ABM86086.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|123997451|gb|ABM86327.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|157928972|gb|ABW03771.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|296485626|tpg|DAA27741.1| TPA: LSM7 homolog, U6 small nuclear RNA associated [Bos taurus]
gi|351703671|gb|EHB06590.1| U6 snRNA-associated Sm-like protein LSm7 [Heterocephalus glaber]
gi|383419119|gb|AFH32773.1| U6 snRNA-associated Sm-like protein LSm7 [Macaca mulatta]
gi|384940076|gb|AFI33643.1| U6 snRNA-associated Sm-like protein LSm7 [Macaca mulatta]
gi|410212872|gb|JAA03655.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410248364|gb|JAA12149.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410299120|gb|JAA28160.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410333089|gb|JAA35491.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
Length = 103
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|168012739|ref|XP_001759059.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689758|gb|EDQ76128.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 102
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 11/72 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND----------IG 58
DL K++D+ + +KL+ R + GTL+G+DQ +NLV+D E N + +D +G
Sbjct: 10 DLAKFVDRGVSVKLSGGRQVTGTLKGYDQLLNLVLDEATE-NLRDSDDPLKTTDQMRQLG 68
Query: 59 MVVIRGNSVVTV 70
++V RG +V+ V
Sbjct: 69 LIVCRGTAVMLV 80
>gi|108743721|gb|ABG02169.1| IP12320p [Drosophila melanogaster]
Length = 287
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 200 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLG 259
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 260 LVVCRGTALVLI 271
>gi|297703033|ref|XP_002828459.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Pongo
abelii]
Length = 103
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|326934238|ref|XP_003213199.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Meleagris gallopavo]
Length = 116
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 27 DLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 86
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 87 VVCRGTSVVLI 97
>gi|126323619|ref|XP_001372576.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Monodelphis domestica]
Length = 103
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|157823717|ref|NP_001102202.1| U6 snRNA-associated Sm-like protein LSm7 [Rattus norvegicus]
gi|149034482|gb|EDL89219.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_d [Rattus norvegicus]
Length = 103
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|365983778|ref|XP_003668722.1| hypothetical protein NDAI_0B04440 [Naumovozyma dairenensis CBS
421]
gi|343767489|emb|CCD23479.1| hypothetical protein NDAI_0B04440 [Naumovozyma dairenensis CBS
421]
Length = 121
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNS 66
DL KY D K+++KL +++ G L+G+DQ MNLV+D T++ N ++IG ++ S
Sbjct: 33 DLSKYKDSKVRVKLMGGKIVTGILKGYDQLMNLVLDETIDYLKNPDDEIGTASLKNKS 90
>gi|427784749|gb|JAA57826.1| Putative small nuclear ribonucleoprotein splicing factor
[Rhipicephalus pulchellus]
Length = 109
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL KY+DK +++K R G L+G+D +NLVIDN E ++ +G+
Sbjct: 21 DLSKYLDKAIRVKFQGGREATGILKGYDPLLNLVIDNATEFLRDPDDPYKLTDDTRTLGL 80
Query: 60 VVIRGNSVVTV 70
VV RG +VV +
Sbjct: 81 VVCRGTAVVVI 91
>gi|18400270|ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|21536995|gb|AAM61336.1| Sm protein, putative [Arabidopsis thaliana]
gi|27754337|gb|AAO22620.1| putative Sm protein [Arabidopsis thaliana]
gi|28393853|gb|AAO42334.1| putative Sm protein [Arabidopsis thaliana]
gi|332641944|gb|AEE75465.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|332641945|gb|AEE75466.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
Length = 128
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+D+KL + L R ++GTLR FDQF N V++ E + G + DI G+ VIRG
Sbjct: 15 LASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|240848877|ref|NP_001155739.1| LSM7 homolog, U6 small nuclear RNA associated (S.
cerevisiae)-like [Acyrthosiphon pisum]
gi|239790049|dbj|BAH71610.1| ACYPI008033 [Acyrthosiphon pisum]
Length = 107
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL +Y++K +++K + R + G L+GFD +NLV+DNT+E + + +G+
Sbjct: 20 DLTRYLEKAIRVKFSGGREVSGILKGFDPLVNLVLDNTLEYLRDPDEPMKLTEDTRTLGL 79
Query: 60 VVIRGNSVVTV 70
VV RG S+V +
Sbjct: 80 VVCRGTSIVLI 90
>gi|225442069|ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera]
gi|147803430|emb|CAN62239.1| hypothetical protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN 52
MS +G P D L Y+DKKL + L NR ++G LR FDQF N V++ E + G+
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGD 59
Query: 53 EKNDI--GMVVIRGNSVVTVEALE 74
DI G+ VIRG +VV + L+
Sbjct: 60 LYCDIPLGLYVIRGENVVLIGELD 83
>gi|258575703|ref|XP_002542033.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902299|gb|EEP76700.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 91
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 22/76 (28%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFD---------------------QFMNLVIDNT 46
P+LKKYM+K+L I++N NR ++G LRG+D FMN+V+D
Sbjct: 6 PELKKYMEKRLFIQINGNRKVIGVLRGYDVCHYPSSTCSELYSMPLTPIQVFMNIVLDEA 65
Query: 47 VEVN-GNEKNDIGMVV 61
VE G EK +GMVV
Sbjct: 66 VEEKAGGEKVRLGMVV 81
>gi|387915654|gb|AFK11436.1| u6 snRNA-associated Sm-like protein LSm7-like protein
[Callorhinchus milii]
gi|392880576|gb|AFM89120.1| u6 snRNA-associated Sm-like protein LSm7-like protein
[Callorhinchus milii]
Length = 103
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYVRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|357514091|ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 131
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+DKKL I L R ++GTLR FDQF N V++ E + G+ DI G+ VIRG
Sbjct: 15 LASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGE 74
Query: 66 SVVTV 70
+VV +
Sbjct: 75 NVVLI 79
>gi|351721438|ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
Length = 128
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN 52
MS +G P D L Y+DKKL + L R ++GTLR FDQF N V++ E + G+
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGD 59
Query: 53 EKNDI--GMVVIRGNSVVTVEALE 74
DI G+ VIRG +VV + L+
Sbjct: 60 LYCDIPLGLYVIRGENVVLIGELD 83
>gi|198436837|ref|XP_002127828.1| PREDICTED: similar to LSM7 homolog, U6 small nuclear RNA
associated isoform 2 [Ciona intestinalis]
Length = 99
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL KY+D+ +++K + R G L+GFD +NLV+D+T E ++ +G+
Sbjct: 12 DLSKYLDRPIRVKFHGGREASGVLKGFDPLLNLVLDSTTETLRDPDDPYKLSDDTRALGL 71
Query: 60 VVIRGNSVVTV 70
V RG SVV +
Sbjct: 72 TVCRGTSVVLI 82
>gi|124805657|ref|XP_001350501.1| lsm7 homologue, putative [Plasmodium falciparum 3D7]
gi|23496624|gb|AAN36181.1| lsm7 homologue, putative [Plasmodium falciparum 3D7]
Length = 108
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
D+KK+M++K+++K + R +VGTL G D NLV+D T E V ++ IG+
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGTLIGHDAIFNLVLDKTEEYIRDPNDSFVVTDKTRSIGL 79
Query: 60 VVIRGNSVVTVEALE 74
+V RG SV + +E
Sbjct: 80 IVARGTSVALITPVE 94
>gi|297829970|ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata]
gi|297328707|gb|EFH59126.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN 52
MS +G P D L Y+D+KL + L R ++GTLR FDQF N V++ E + G
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDRKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGE 59
Query: 53 EKNDI--GMVVIRGNSVVTVEALE 74
+ DI G+ VIRG +VV + L+
Sbjct: 60 QYCDIPLGLYVIRGENVVLIGELD 83
>gi|20129565|ref|NP_609807.1| LSm7, isoform A [Drosophila melanogaster]
gi|386769700|ref|NP_001246045.1| LSm7, isoform B [Drosophila melanogaster]
gi|194884417|ref|XP_001976253.1| GG20109 [Drosophila erecta]
gi|195344568|ref|XP_002038853.1| GM17159 [Drosophila sechellia]
gi|195484003|ref|XP_002090522.1| GE13166 [Drosophila yakuba]
gi|195579644|ref|XP_002079671.1| GD21898 [Drosophila simulans]
gi|7298334|gb|AAF53562.1| LSm7, isoform A [Drosophila melanogaster]
gi|21064825|gb|AAM29642.1| RH73529p [Drosophila melanogaster]
gi|190659440|gb|EDV56653.1| GG20109 [Drosophila erecta]
gi|194133983|gb|EDW55499.1| GM17159 [Drosophila sechellia]
gi|194176623|gb|EDW90234.1| GE13166 [Drosophila yakuba]
gi|194191680|gb|EDX05256.1| GD21898 [Drosophila simulans]
gi|383291517|gb|AFH03719.1| LSm7, isoform B [Drosophila melanogaster]
Length = 110
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 23 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLG 82
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 83 LVVCRGTALVLI 94
>gi|346470139|gb|AEO34914.1| hypothetical protein [Amblyomma maculatum]
Length = 107
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL KY+DK +++K R G L+G+D +NLVIDN E ++ +G+
Sbjct: 19 DLSKYLDKAIRVKFQGGREATGILKGYDPLLNLVIDNATEFLRDPDDPYKLTDDTRTLGL 78
Query: 60 VVIRGNSVVTV 70
VV RG +VV +
Sbjct: 79 VVCRGTAVVVI 89
>gi|302772304|ref|XP_002969570.1| hypothetical protein SELMODRAFT_146440 [Selaginella
moellendorffii]
gi|302774851|ref|XP_002970842.1| hypothetical protein SELMODRAFT_94071 [Selaginella
moellendorffii]
gi|300161553|gb|EFJ28168.1| hypothetical protein SELMODRAFT_94071 [Selaginella
moellendorffii]
gi|300163046|gb|EFJ29658.1| hypothetical protein SELMODRAFT_146440 [Selaginella
moellendorffii]
Length = 127
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 4 SGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND--IGM 59
S L +DKKL + L R +VGTLR FDQF NLV++ VE + G+ D +G+
Sbjct: 8 SFHTTSLADNLDKKLLVILRDGRKLVGTLRSFDQFANLVLEKAVERIIVGDLYCDLPLGL 67
Query: 60 VVIRGNSVVTVEALEPVSK 78
+IRG +VV V L+ K
Sbjct: 68 YIIRGENVVLVGELDQTKK 86
>gi|125985551|ref|XP_001356539.1| GA12164 [Drosophila pseudoobscura pseudoobscura]
gi|195147554|ref|XP_002014744.1| GL19334 [Drosophila persimilis]
gi|54644863|gb|EAL33603.1| GA12164 [Drosophila pseudoobscura pseudoobscura]
gi|194106697|gb|EDW28740.1| GL19334 [Drosophila persimilis]
Length = 110
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 23 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEDSTRSLG 82
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 83 LVVCRGTALVLI 94
>gi|195114518|ref|XP_002001814.1| GI14941 [Drosophila mojavensis]
gi|195386594|ref|XP_002051989.1| GJ24083 [Drosophila virilis]
gi|193912389|gb|EDW11256.1| GI14941 [Drosophila mojavensis]
gi|194148446|gb|EDW64144.1| GJ24083 [Drosophila virilis]
Length = 110
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 23 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEDSTRSLG 82
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 83 LVVCRGTALVLI 94
>gi|195035361|ref|XP_001989146.1| GH10206 [Drosophila grimshawi]
gi|193905146|gb|EDW04013.1| GH10206 [Drosophila grimshawi]
Length = 113
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 23 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEDSTRSLG 82
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 83 LVVCRGTALVLI 94
>gi|194759991|ref|XP_001962225.1| GF14546 [Drosophila ananassae]
gi|190615922|gb|EDV31446.1| GF14546 [Drosophila ananassae]
Length = 110
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 23 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEDSTRSLG 82
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 83 LVVCRGTALVLI 94
>gi|148699534|gb|EDL31481.1| mCG12127, isoform CRA_b [Mus musculus]
Length = 114
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 25 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYKLTEDTRQLGL 84
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 85 VVCRGTSVVLI 95
>gi|169648015|gb|ACA62009.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K+++ K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 11 DLSKYLEKQIRAKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLG 70
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 71 LVVCRGTALVLI 82
>gi|195436750|ref|XP_002066318.1| GK18159 [Drosophila willistoni]
gi|194162403|gb|EDW77304.1| GK18159 [Drosophila willistoni]
Length = 110
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTVE + + +G
Sbjct: 23 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEDSTRSLG 82
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 83 LVVCRGTALVLI 94
>gi|225705776|gb|ACO08734.1| U6 snRNA-associated Sm-like protein LSm7 [Oncorhynchus mykiss]
Length = 111
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK++++K R G L+GFD +NL +D+T+E + + +G+
Sbjct: 22 DLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLALDSTIEYLRDPDDQFKLTEDTRQLGL 81
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 82 VVCRGTSVVLI 92
>gi|13384714|ref|NP_079625.1| U6 snRNA-associated Sm-like protein LSm7 [Mus musculus]
gi|52783146|sp|Q9CQQ8.1|LSM7_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|12833484|dbj|BAB22540.1| unnamed protein product [Mus musculus]
gi|12841027|dbj|BAB25051.1| unnamed protein product [Mus musculus]
gi|12849195|dbj|BAB28245.1| unnamed protein product [Mus musculus]
gi|12850664|dbj|BAB28806.1| unnamed protein product [Mus musculus]
gi|20380289|gb|AAH27511.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|51980691|gb|AAH81444.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|148699536|gb|EDL31483.1| mCG12127, isoform CRA_d [Mus musculus]
gi|148699790|gb|EDL31737.1| mCG5973 [Mus musculus]
Length = 103
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|50291047|ref|XP_447956.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527267|emb|CAG60907.1| unnamed protein product [Candida glabrata]
Length = 117
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNT-------VEVNGNEK--NDIGM 59
DL KY D K+ +KL R++ G L+G+DQ MNLV++ T VE ++ +G+
Sbjct: 33 DLGKYKDSKVSVKLMGGRIVTGILKGYDQLMNLVLEETEETLKPEVETGATQQVTRQLGL 92
Query: 60 VVIRGNSVVTVEALE 74
VIRG ++++ L+
Sbjct: 93 TVIRGTILISLSPLD 107
>gi|321263450|ref|XP_003196443.1| U6 snRNA binding protein [Cryptococcus gattii WM276]
gi|317462919|gb|ADV24656.1| U6 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 111
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDIGMVVIRGNS 66
+L +++DK +++K R G L+G+DQ MNLV+D+ VE +G +G+VV+RG +
Sbjct: 28 NLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYEDGRPTRSLGLVVLRGPN 87
Query: 67 VVTV 70
+V V
Sbjct: 88 IVLV 91
>gi|291228609|ref|XP_002734270.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Saccoglossus kowalevskii]
Length = 116
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL K++DK +++K R G L+G+D +NLVID T E + E +G+
Sbjct: 28 DLSKFIDKPIRVKFQGGREASGILKGYDPLLNLVIDGTTEFVRDPDDPYKLLEETRQLGL 87
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 88 VVCRGTSVVLI 98
>gi|148699533|gb|EDL31480.1| mCG12127, isoform CRA_a [Mus musculus]
Length = 106
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 17 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRDPDDQYKLTEDTRQLGL 76
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 77 VVCRGTSVVLI 87
>gi|225706932|gb|ACO09312.1| U6 snRNA-associated Sm-like protein LSm7 [Osmerus mordax]
Length = 103
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK ++ K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKPIRAKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQFKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|405119724|gb|AFR94496.1| U6 snRNA binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 131
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDIGMVVIRGNS 66
+L +++DK +++K R G L+G+DQ MNLV+D+ VE +G +G+VV+RG +
Sbjct: 28 NLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYEDGRPTRSLGLVVLRGPN 87
Query: 67 VVTV 70
+V V
Sbjct: 88 IVLV 91
>gi|241244292|ref|XP_002402270.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|215496302|gb|EEC05942.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|442757953|gb|JAA71135.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
Length = 107
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K R G L+G+D +NLVIDN E + + +G+
Sbjct: 19 DLSKYLDKAIRVKFQGGREATGILKGYDPLLNLVIDNATEYLRDPDDPYKLTEDTRTLGL 78
Query: 60 VVIRGNSVVTV 70
VV RG +VV +
Sbjct: 79 VVCRGTAVVVI 89
>gi|58261590|ref|XP_568205.1| U6 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115921|ref|XP_773347.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255971|gb|EAL18700.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230287|gb|AAW46688.1| U6 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 131
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDIGMVVIRGNS 66
+L +++DK +++K R G L+G+DQ MNLV+D+ VE +G +G+VV+RG +
Sbjct: 28 NLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVEEYEDGRPTRSLGLVVLRGPN 87
Query: 67 VVTV 70
+V V
Sbjct: 88 IVLV 91
>gi|390981169|pdb|4EMK|C Chain C, Crystal Structure Of Splsm567
Length = 113
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN--------DIGMV 60
DL +Y D+++Q R I G L+GFDQ NLV+D+ E N ++ +G+V
Sbjct: 27 DLSRYQDQRIQATFTGGRQITGILKGFDQLXNLVLDDVEEQLRNPEDGKLTGAIRKLGLV 86
Query: 61 VIRGNSVVTV 70
V+RG ++V +
Sbjct: 87 VVRGTTLVLI 96
>gi|323650499|gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]
Length = 128
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+DKK+ + L NR ++G LR FDQF N+V++ E + G+ DI G+ VIRG
Sbjct: 15 LATYLDKKILVLLRDNRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|304323319|gb|ADM24796.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323321|gb|ADM24797.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323331|gb|ADM24802.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323333|gb|ADM24803.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323339|gb|ADM24806.1| putative small nuclear ribonucleoprotein [Sporidiobolus
johnsonii]
Length = 77
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 13 YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN----------DIGMVVI 62
Y+DKK+++K R +VGTL+G+DQ +NLV+D+ E + +G+ V+
Sbjct: 1 YVDKKIRVKFTGGREVVGTLKGYDQLLNLVMDDLEETLRDPDTGLPSIPPATRSLGLAVL 60
Query: 63 RGNSVVTVEALE 74
RG S+V + L+
Sbjct: 61 RGTSLVVLSPLD 72
>gi|320592629|gb|EFX05059.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 107
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKN-DIGMVVIRGNSVV 68
MD+++ IK N R + G L+GFD +N+V+DN E +G K+ +G+ VIRG +
Sbjct: 1 MDREIYIKFNGGREVSGVLKGFDPLLNMVLDNAQEKMRNADGETKSRSLGLAVIRGTHIT 60
Query: 69 TVEALEPVSKSQ 80
T L PV S+
Sbjct: 61 T---LHPVDGSE 69
>gi|114050803|ref|NP_001040136.1| U6 snRNA-associated Sm-like protein [Bombyx mori]
gi|87248171|gb|ABD36138.1| U6 snRNA-associated Sm-like protein [Bombyx mori]
Length = 118
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG---------NEKNDIGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E ++ +G+
Sbjct: 30 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 89
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 90 VVCRGTSVVLI 100
>gi|344232902|gb|EGV64775.1| U6 snRNA-associated Sm-like protein LSm7 [Candida tenuis ATCC
10573]
Length = 129
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL KY D +++++ R IVG L+GFDQ MNLV+++ E V + +G
Sbjct: 39 DLNKYKDTQIKVEFIGGRQIVGVLKGFDQLMNLVLESVEETLRDPEDPNVLTKDTRSLGR 98
Query: 60 VVIRGNSVVTVEALE 74
VV+RG S++T+ L+
Sbjct: 99 VVVRGPSLLTISPLD 113
>gi|209879165|ref|XP_002141023.1| U6 snRNA-associated Sm-like protein LSm7 [Cryptosporidium muris
RN66]
gi|209556629|gb|EEA06674.1| U6 snRNA-associated Sm-like protein LSm7, putative
[Cryptosporidium muris RN66]
Length = 95
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K+++K++++K+ R + G LRG+D N+V+D+T E +E+ D+G+
Sbjct: 8 DLSKFINKEIRVKICGGRDVTGILRGYDGVTNIVLDDTKEFLLDPEDLTNTTSEQRDLGL 67
Query: 60 VVIRGNSVVTVEALE 74
+V+RG S++ + L+
Sbjct: 68 LVVRGTSILMIAPLD 82
>gi|389611325|dbj|BAM19274.1| SM protein G, putative [Papilio polytes]
Length = 118
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG---------NEKNDIGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E ++ +G+
Sbjct: 30 DLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLLDDTRALGL 89
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 90 VVCRGTSVVLI 100
>gi|169647987|gb|ACA61995.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV----------EVNGNEKNDIG 58
DL KY++K++++K R G L+G+D +NLV+DNTV ++ + +G
Sbjct: 11 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVGYLRDSDEPYKLTEEQTRSLG 70
Query: 59 MVVIRGNSVVTV 70
+VV RG ++V +
Sbjct: 71 LVVCRGTALVLI 82
>gi|91089491|ref|XP_969723.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein
[Tribolium castaneum]
Length = 113
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY++K +++K R G L+G+D +NLV+DNT+E + + +G+
Sbjct: 26 DLSKYLEKTIRVKFAGGREASGILKGYDPLLNLVLDNTIEYLRDPDDPYKLTEDTRALGL 85
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 86 VVCRGTSVVLI 96
>gi|270012864|gb|EFA09312.1| hypothetical protein TcasGA2_TC030695, partial [Tribolium
castaneum]
Length = 104
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY++K +++K R G L+G+D +NLV+DNT+E + + +G+
Sbjct: 17 DLSKYLEKTIRVKFAGGREASGILKGYDPLLNLVLDNTIEYLRDPDDPYKLTEDTRALGL 76
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 77 VVCRGTSVVLI 87
>gi|356544192|ref|XP_003540538.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
max]
Length = 97
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 11/71 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL K++DK +Q+KL R GTL+G+DQ +NLV+D VE ++ +G+
Sbjct: 10 DLAKFVDKGVQVKLTGGRQ--GTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQNRSLGL 67
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 68 IVFRGTAVMLV 78
>gi|357613355|gb|EHJ68454.1| U6 snRNA-associated Sm-like protein [Danaus plexippus]
Length = 116
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG---------NEKNDIGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E ++ +G+
Sbjct: 29 DLSKYLEKCIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLRDPDDPYKLVDDTRALGL 88
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 89 VVCRGTSVVLI 99
>gi|255550399|ref|XP_002516250.1| lsm1, putative [Ricinus communis]
gi|223544736|gb|EEF46252.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN 52
MS +G P D L Y+DKKL + L R ++G LR FDQF N+V++ E + G+
Sbjct: 1 MSWAG-PDDIFLSTSLATYLDKKLLVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGD 59
Query: 53 EKNDI--GMVVIRGNSVVTVEALE 74
DI G+ VIRG +VV + L+
Sbjct: 60 LYCDILLGLYVIRGENVVLIGELD 83
>gi|328791249|ref|XP_003251537.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 isoform 2
[Apis mellifera]
gi|350407868|ref|XP_003488222.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Bombus
impatiens]
gi|380018582|ref|XP_003693206.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Apis florea]
Length = 113
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E + + +G+
Sbjct: 25 DLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDPYKLNQDTRMLGL 84
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 85 VVCRGTSVVLI 95
>gi|336363390|gb|EGN91783.1| hypothetical protein SERLA73DRAFT_148178 [Serpula lacrymans var.
lacrymans S7.3]
Length = 92
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN--DIGMVVIRGN 65
DL KY ++++++K R +VG L+G+DQ +NLV+D E +N E + +G+ V+RG
Sbjct: 11 DLSKYANERIRVKFTGGREVVGILKGYDQLLNLVLDEVEEQINEPEPHSRSLGLAVLRGP 70
Query: 66 SVVTV 70
++ V
Sbjct: 71 TITLV 75
>gi|388521873|gb|AFK48998.1| unknown [Lotus japonicus]
Length = 80
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN 52
MS +G P D L Y+DKKL + L R ++GTLR FDQF N V++ E + G+
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGD 59
Query: 53 EKNDI--GMVVIRGNSVVT 69
DI G+ VIRG +
Sbjct: 60 LYCDIPLGLYVIRGGECCS 78
>gi|294464784|gb|ADE77898.1| unknown [Picea sitchensis]
Length = 80
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE 48
DL K++DK +Q+KL R + GTL+G+DQ +NLV+D +E
Sbjct: 10 DLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIE 49
>gi|383847376|ref|XP_003699330.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Megachile rotundata]
Length = 115
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E + + +G+
Sbjct: 27 DLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDPYKLNQDTRMLGL 86
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 87 VVCRGTSVVLI 97
>gi|340721932|ref|XP_003399367.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like [Bombus
terrestris]
Length = 113
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E + + +G+
Sbjct: 25 DLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDPYKLNQDTRMLGL 84
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 85 VVCRGTSVVLI 95
>gi|328791247|ref|XP_001121212.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 isoform 1
[Apis mellifera]
gi|380018580|ref|XP_003693205.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Apis florea]
Length = 109
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E + + +G+
Sbjct: 21 DLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDPYKLNQDTRMLGL 80
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 81 VVCRGTSVVLI 91
>gi|326429750|gb|EGD75320.1| hypothetical protein PTSG_06970 [Salpingoeca sp. ATCC 50818]
Length = 107
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN---------GNEKNDIGM 59
DL+KY+DKKL++K + R +VG L+G+D NLV+ +T+E ++ +G+
Sbjct: 16 DLEKYVDKKLRVKFSGGREVVGVLQGYDPLSNLVLSDTIEFLRDPSDLSKITDKTRTLGL 75
Query: 60 VVIRGNSVVTVEALEPVSKSQ 80
V R S+V + E +++++
Sbjct: 76 CVCRHVSIVMIAPEEGMTETE 96
>gi|304323323|gb|ADM24798.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323325|gb|ADM24799.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323327|gb|ADM24800.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323329|gb|ADM24801.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323335|gb|ADM24804.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323337|gb|ADM24805.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323341|gb|ADM24807.1| putative small nuclear ribonucleoprotein [Sporidiobolus
johnsonii]
Length = 77
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 13 YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN----------DIGMVVI 62
Y+DKK+++K R +VGTL+G+DQ +NLV+D+ E + +G+ V+
Sbjct: 1 YVDKKIRVKFTGGREVVGTLKGYDQLLNLVMDDLEETLRDPDTGLPSIPPATRSLGLAVL 60
Query: 63 RGNSVVTVEALEPVSKS 79
RG S+V L PV S
Sbjct: 61 RGTSLV---VLSPVDGS 74
>gi|409043237|gb|EKM52720.1| hypothetical protein PHACADRAFT_261323 [Phanerochaete carnosa
HHB-10118-sp]
Length = 94
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEK----NDIGMVVIRG 64
DL KY+++++++K R + G L+GFDQ +NLV+D+ E E +G+VV+RG
Sbjct: 11 DLAKYVNERIRVKFTGGREVTGVLKGFDQLLNLVLDDVEEQLHTEPLPSTRQLGLVVLRG 70
Query: 65 NSVVTVEALEPV 76
T+ L PV
Sbjct: 71 P---TLTLLSPV 79
>gi|307194533|gb|EFN76825.1| U6 snRNA-associated Sm-like protein LSm7 [Harpegnathos saltator]
Length = 107
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E + + +G+
Sbjct: 19 DLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDPYKLIQDTRMLGL 78
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 79 VVCRGTSVVLI 89
>gi|302677314|ref|XP_003028340.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune H4-8]
gi|300102028|gb|EFI93437.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune H4-8]
Length = 118
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---VNGNEKNDIGMVVIRGN 65
DL KY+++++++K R + G L+G+DQ +NLV+D E + + +G+ V+RG
Sbjct: 37 DLSKYVNERIRVKFTGGREVTGLLKGYDQLLNLVLDEVTEDVLLPEPHQRSLGLAVLRGP 96
Query: 66 SVVTVEALEPVSKSQ 80
++ V PV S+
Sbjct: 97 TITLV---SPVDGSE 108
>gi|403169358|ref|XP_003328805.2| small nuclear ribonucleoprotein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167924|gb|EFP84386.2| small nuclear ribonucleoprotein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 125
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----------NGNEKNDIG 58
DL K+ DK++++K R I G L+G+DQ +NLV+D E+ + + +G
Sbjct: 37 DLAKFADKRVRVKFMGGREITGILKGYDQLLNLVMDEVEEILREPEGATVTSPPKTRSLG 96
Query: 59 MVVIRGNSVVTV 70
+ VIRG S+V +
Sbjct: 97 LAVIRGTSLVVI 108
>gi|257076617|ref|ZP_05570978.1| snRNP Sm-like protein [Ferroplasma acidarmanus fer1]
Length = 71
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVT 69
L++ ++KK+ + L NR +VGTL G+D++MN+ +D+ E NG + IG V+IRG++VV
Sbjct: 9 LEENLNKKVTLLLKDNRSLVGTLVGYDEYMNMTLDDA-EENGEVQRKIGKVIIRGSNVVR 67
Query: 70 V 70
+
Sbjct: 68 I 68
>gi|302840191|ref|XP_002951651.1| hypothetical protein VOLCADRAFT_109137 [Volvox carteri f.
nagariensis]
gi|300262899|gb|EFJ47102.1| hypothetical protein VOLCADRAFT_109137 [Volvox carteri f.
nagariensis]
Length = 108
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL K++DK +++KL R + G L+G+DQ +NLV+D VE +E +G+
Sbjct: 11 DLAKFVDKGVRVKLAGGREVQGILKGYDQLLNLVLDEAVEYLRDPEDPLTVTDETRLLGL 70
Query: 60 VVIRGNSVVTV 70
+V RG +V+ V
Sbjct: 71 MVCRGTAVMLV 81
>gi|357450125|ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355484387|gb|AES65590.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 128
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+DKKL + L R ++G LR FDQF N+V++ E + G+ D+ G+ VIRG
Sbjct: 15 LATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|156544990|ref|XP_001608041.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Nasonia
vitripennis]
Length = 115
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E + + +G+
Sbjct: 27 DLSKYLEKNIRVKFAGGREASGILKGYDPLLNLVLDNTTEYLRDPDDPYKLNQDTRMLGL 86
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 87 VVCRGTSVVLI 97
>gi|443924506|gb|ELU43510.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 129
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 35/111 (31%)
Query: 2 SRSGQPP------------DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV 49
SR G PP DL KY D+++++K R + G L+G+DQ +NLV+D+ E
Sbjct: 21 SRGGAPPGSADKPRREAILDLSKYQDERIRVKFTGGRQVTGVLKGYDQLLNLVLDDVQEE 80
Query: 50 ----------------NGNEKND----IGMVVIRGNSVVTVEALEPVSKSQ 80
+G E +G+ V+RG T+ L PV S+
Sbjct: 81 RQGTLSSNAPLGSILNSGPEPTPHTRALGLAVLRGP---TITILSPVDGSE 128
>gi|168045744|ref|XP_001775336.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673281|gb|EDQ59806.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 102
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND----------IG 58
DL K++D+ + +KL+ R + G L+G+DQ +NLV+D E N + +D +G
Sbjct: 10 DLAKFVDRGVSVKLSGGRQVTGILKGYDQLLNLVLDEATE-NLRDSDDPMKTTDQIRQLG 68
Query: 59 MVVIRGNSVVTV 70
++V RG +V+ V
Sbjct: 69 LIVCRGTAVMLV 80
>gi|224073612|ref|XP_002304120.1| predicted protein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN 52
MS +G P D L Y+DKKL + L R ++G LR FDQF N V++ E + G+
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGD 59
Query: 53 EKNDI--GMVVIRGNSVVTVEALE 74
DI G+ VIRG +VV + L+
Sbjct: 60 LYCDIHLGLYVIRGENVVLIGELD 83
>gi|48477793|ref|YP_023499.1| snRNP Sm-like protein [Picrophilus torridus DSM 9790]
gi|48430441|gb|AAT43306.1| snRNP Sm-like protein [Picrophilus torridus DSM 9790]
Length = 71
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVT 69
L++ ++KK+ + L NR++ GTL G+D++MN+ +D+ E +G + +G VVIRG++VV
Sbjct: 9 LEESLNKKVSLLLKDNRVLEGTLAGYDEYMNMTLDDA-EESGETQRKLGTVVIRGSNVVR 67
Query: 70 V 70
+
Sbjct: 68 I 68
>gi|57530588|ref|NP_001006337.1| U6 snRNA-associated Sm-like protein LSm7 [Gallus gallus]
gi|53130424|emb|CAG31541.1| hypothetical protein RCJMB04_7l22 [Gallus gallus]
Length = 116
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+ K +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 27 DLSKYIGKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 86
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 87 VVCRGTSVVLI 97
>gi|408404869|ref|YP_006862852.1| small nuclear ribonucleoprotein [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408365465|gb|AFU59195.1| putative small nuclear ribonucleoprotein [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 76
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVV 68
L + + K + IKL ++I G L GFDQ MNL+++++VE+ + ND+G +V+RG++VV
Sbjct: 10 LDESLGKVVLIKLKGGKVIRGNLHGFDQHMNLLLEDSVEILEEGKSNDLGTIVVRGDNVV 69
Query: 69 TV 70
+
Sbjct: 70 II 71
>gi|302499670|ref|XP_003011830.1| U6 snRNP-associated protein Lsm7 [Arthroderma benhamiae CBS 112371]
gi|291175384|gb|EFE31190.1| U6 snRNP-associated protein Lsm7 [Arthroderma benhamiae CBS 112371]
Length = 223
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV 49
DL KYMDK++ +K N R + G L+G+DQ MNLV+D+ E
Sbjct: 115 DLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKET 155
>gi|312068840|ref|XP_003137402.1| hypothetical protein LOAG_01816 [Loa loa]
Length = 130
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL +++DKK+++K R G L+G+D +NLV+DN VE + E +G+
Sbjct: 46 DLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVRDTEDPQKVTEETRQLGL 105
Query: 60 VVIRGNSVVTV 70
+V RG ++ V
Sbjct: 106 IVARGTAITVV 116
>gi|449544087|gb|EMD35061.1| hypothetical protein CERSUDRAFT_85794 [Ceriporiopsis
subvermispora B]
Length = 93
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNT---VEVNGNEKN-DIGMVVIRG 64
DL KY+++++++K R + G L+G+DQ +NLV+D ++ G K +G+VV+RG
Sbjct: 11 DLAKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVEEQLQTEGELKTRSLGLVVLRG 70
Query: 65 NSVVTVEALEPV 76
TV L PV
Sbjct: 71 P---TVTLLSPV 79
>gi|302838708|ref|XP_002950912.1| hypothetical protein VOLCADRAFT_109782 [Volvox carteri f.
nagariensis]
gi|300264029|gb|EFJ48227.1| hypothetical protein VOLCADRAFT_109782 [Volvox carteri f.
nagariensis]
Length = 127
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +D++L I L R ++G LR FDQF NLVI+ VE + G++ DI G+ VIRG
Sbjct: 15 LAEELDQRLLIVLRDGRKVLGVLRSFDQFANLVIEGAVERIIVGDQYGDIPLGLQVIRGE 74
Query: 66 SVVTV 70
+VV +
Sbjct: 75 NVVLL 79
>gi|393907574|gb|EFO26665.2| hypothetical protein LOAG_01816 [Loa loa]
Length = 101
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL +++DKK+++K R G L+G+D +NLV+DN VE + E +G+
Sbjct: 17 DLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVRDTEDPQKVTEETRQLGL 76
Query: 60 VVIRGNSVVTV 70
+V RG ++ V
Sbjct: 77 IVARGTAITVV 87
>gi|297844878|ref|XP_002890320.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
gi|297336162|gb|EFH66579.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+DKKL + L R ++G LR FDQF N VI+ E + G+ DI G+ +IRG
Sbjct: 15 LAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVIEEAYERVIVGDLYCDIPLGLYIIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|74025842|ref|XP_829487.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma brucei TREU927]
gi|9837172|gb|AAG00460.1|AF280392_1 Sm-G [Trypanosoma brucei]
gi|70834873|gb|EAN80375.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261335490|emb|CBH18484.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma brucei
gambiense DAL972]
Length = 82
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-------VNGNEKNDIGMV 60
+L +M+K++++KL + R I G LRG D+FM++V+ + V+ V +K +G
Sbjct: 8 ANLNHFMEKRVKVKLTSGRSISGELRGVDEFMSIVLYDAVDETPTSGTVENEDKTSLGTA 67
Query: 61 VIRGNSVVTVEALE 74
V+RG +V + LE
Sbjct: 68 VVRGAMIVDIVGLE 81
>gi|318054598|ref|NP_001187750.1| LSM7 homolog, U6 small nuclear RNA associated [Ictalurus
punctatus]
gi|308323873|gb|ADO29072.1| u6 snRNA-associated sm-like protein lsm7 [Ictalurus punctatus]
Length = 103
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY++K +++K R G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYINKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG +VV +
Sbjct: 74 VVCRGTAVVLI 84
>gi|299473000|emb|CBN77401.1| Sm-like protein LSm7 [Ectocarpus siliculosus]
Length = 102
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL+KY+D+ +++KL R + G L+GFD +N+V+D +E + E ++G+
Sbjct: 14 DLQKYLDQGVRVKLQGGREVHGVLKGFDPLVNVVLDECIEFIRDPTDPYKLTEETRELGL 73
Query: 60 VVIRGNSV 67
VV RG V
Sbjct: 74 VVCRGTQV 81
>gi|452824595|gb|EME31597.1| small nuclear ribonucleoprotein B and B' [Galdieria sulphuraria]
Length = 214
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 8/74 (10%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV------NGNEKNDIGMVVIR 63
L +Y++ +L++ L+ R+IVG L FD+ +NLV+++ E + EK +G+V++R
Sbjct: 9 LLQYINYRLRVSLDDQRVIVGQLLAFDKHLNLVLNDCEEFRKLKKQDKEEKRALGLVLLR 68
Query: 64 GNSVV--TVEALEP 75
G SV+ TVE+ P
Sbjct: 69 GESVITMTVESPPP 82
>gi|359484235|ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
vinifera]
gi|297738539|emb|CBI27784.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+DKKL + L R ++G LR FDQF N V++ E + G+ DI G+ VIRG
Sbjct: 15 LASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDIYCDIPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLLGELD 83
>gi|428181541|gb|EKX50404.1| hypothetical protein GUITHDRAFT_103637 [Guillardia theta
CCMP2712]
Length = 98
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL +++D+K+++K + R + G L+GFD +NLV+D +E NE +G+
Sbjct: 11 DLSRHVDQKVRVKFSGGREVEGRLKGFDTLVNLVLDECIEYIRDPDDPYKLTNETRQLGL 70
Query: 60 VVIRGNSVVTV 70
+V RG +V V
Sbjct: 71 IVCRGTAVTLV 81
>gi|255583960|ref|XP_002532727.1| lsm1, putative [Ricinus communis]
gi|223527535|gb|EEF29658.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN 52
MS +G P D L Y+DKKL + L R ++G LR FDQF N V++ E + G+
Sbjct: 1 MSWAG-PEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGD 59
Query: 53 EKNDI--GMVVIRGNSVVTVEALE 74
DI G+ +IRG +VV + L+
Sbjct: 60 LYCDIPLGLYIIRGENVVLIGELD 83
>gi|401883959|gb|EJT48139.1| RNA cap binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 147
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 7/84 (8%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKN--D 56
+ SG DL +DKK+ + L R ++G LR +DQF N ++++TVE NG E D
Sbjct: 7 FTTSGSLVDL---VDKKVLVVLRDGRKLIGVLRSYDQFANFLLESTVERLYNGFEFADID 63
Query: 57 IGMVVIRGNSVVTVEALEPVSKSQ 80
IG+++IRG +VV + ++ +++ +
Sbjct: 64 IGVLLIRGENVVALGEIDLIAEDE 87
>gi|393228545|gb|EJD36188.1| U6 snRNA-associated Sm-like protein LSm7 [Auricularia delicata
TFB-10046 SS5]
Length = 116
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEK---NDIGMVVIRGN 65
DL KY ++++++K R + G L+G+DQ +NLV+D+ EV + +G+ V+RG
Sbjct: 35 DLSKYQNERIRVKFTGGREVTGILKGYDQLLNLVLDDVEEVIQEPEPRTRKLGLAVLRGP 94
Query: 66 SVVTVEALEPVSKSQ 80
TV L PV ++
Sbjct: 95 ---TVTLLSPVDGAE 106
>gi|85107508|ref|XP_962388.1| hypothetical protein NCU06354 [Neurospora crassa OR74A]
gi|28923993|gb|EAA33152.1| predicted protein [Neurospora crassa OR74A]
Length = 96
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 47/74 (63%), Gaps = 13/74 (17%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-------NGNEKNDIG 58
Q ++ ++ ++L I+ I+GT+RGFD+FMNLVIDN +EV E+ ++G
Sbjct: 26 QHSTVQIWLYEQLHIR------IIGTIRGFDEFMNLVIDNAIEVKLVSKTNETEERRELG 79
Query: 59 MVVIRGNSVVTVEA 72
++++G++V +++
Sbjct: 80 QILLKGDNVSLIQS 93
>gi|118794287|ref|XP_321407.3| AGAP001686-PA [Anopheles gambiae str. PEST]
gi|116116223|gb|EAA00900.3| AGAP001686-PA [Anopheles gambiae str. PEST]
Length = 134
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L+ R ++G LR DQF NLV+ T+E GNE DI G+V+IRG +VV
Sbjct: 15 VDKKLMVLLHDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVVIIRGENVVL 74
Query: 70 V 70
+
Sbjct: 75 L 75
>gi|170585954|ref|XP_001897746.1| U6 snRNA-associated Sm-like protein LSm7 [Brugia malayi]
gi|158594770|gb|EDP33349.1| U6 snRNA-associated Sm-like protein LSm7, putative [Brugia
malayi]
Length = 101
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL +++DKK+++K R G L+G+D +NLV+DN VE + E +G+
Sbjct: 17 DLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVRDTEDPQKMTEETRQLGL 76
Query: 60 VVIRGNSVVTV 70
+V RG ++ V
Sbjct: 77 IVARGTAITVV 87
>gi|350297191|gb|EGZ78168.1| U6 snRNA-associated Sm-like protein LSm7 [Neurospora tetrasperma
FGSC 2509]
Length = 82
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKN-DIGMVVIRGNSVV 68
MD+++ +K N R + GTL+G+D MNLV+D+ E GNE +G+VV RG +V
Sbjct: 1 MDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQEAVRDEEGNETTRPLGLVVARGTLLV 60
Query: 69 TVEALEPVSKSQ 80
+ PV S+
Sbjct: 61 VI---SPVDGSE 69
>gi|402589800|gb|EJW83731.1| hypothetical protein WUBG_05358 [Wuchereria bancrofti]
Length = 101
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL +++DKK+++K R G L+G+D +NLV+DN VE + E +G+
Sbjct: 17 DLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVRDTEDPQKMTEETRQLGL 76
Query: 60 VVIRGNSVVTV 70
+V RG ++ V
Sbjct: 77 IVARGTAITVV 87
>gi|226295235|gb|EEH50655.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb18]
Length = 81
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND-----IGMVVIRGNSVV 68
M+K++ +K N R + GTL+G+DQ MNLV+D+ EV +++++ +G+VV RG +V
Sbjct: 1 MEKEVCVKFNGAREVTGTLKGYDQLMNLVLDDVKEVMRDDEDNQTTRPLGLVVARGTLLV 60
Query: 69 TVEALEPVSKSQ 80
+ PV S+
Sbjct: 61 LI---SPVDGSE 69
>gi|324541578|gb|ADY49622.1| U6 snRNA-associated Sm-like protein LSm7 [Ascaris suum]
Length = 101
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL +++DKK+++K R G L+G+D +NLV+DN VE + E +G+
Sbjct: 17 DLSRFIDKKIRVKFQGGREASGILKGYDALINLVLDNAVEYVRDSEDPQKITEETRPLGL 76
Query: 60 VVIRGNSVVTV 70
+V RG ++ V
Sbjct: 77 IVARGTAITVV 87
>gi|148675990|gb|EDL07937.1| mCG17287 [Mus musculus]
Length = 103
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K G L+GFD +NLV+D T+E + + +G+
Sbjct: 14 DLSKYIDKTIRVKFQGGWETSGILKGFDPLLNLVLDGTMEYMRDPDDQYKLTEDTRQLGL 73
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 74 VVCRGTSVVLI 84
>gi|324523853|gb|ADY48312.1| U6 snRNA-associated Sm-like protein LSm7 [Ascaris suum]
Length = 101
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL +++DKK+++K R G L+G+D +NLV+DN VE + E +G+
Sbjct: 17 DLSRFIDKKIRVKFQGGREASGILKGYDALINLVLDNAVEYVRDSEDPQKITEETRALGL 76
Query: 60 VVIRGNSVVTV 70
+V RG ++ V
Sbjct: 77 IVARGTAITVV 87
>gi|424513743|emb|CCO66365.1| U6 snRNA-associated Sm-like protein LSm1 [Bathycoccus prasinos]
Length = 124
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 8/69 (11%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKK+ + L N IVGTLR FDQF N+V++N VE + G +D+ G+ ++RG +VV
Sbjct: 17 IDKKILVVLRDNSNIVGTLRSFDQFANIVLENAVERMIVGTHYSDVPLGLYIVRGENVVL 76
Query: 70 V----EALE 74
+ EA+E
Sbjct: 77 MGDVDEAIE 85
>gi|224119520|ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222873302|gb|EEF10433.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 11/84 (13%)
Query: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN 52
MS +G P D L Y+DKKL + L R ++G LR FDQF N V++ E + G+
Sbjct: 1 MSWAG-PEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGD 59
Query: 53 EKNDI--GMVVIRGNSVVTVEALE 74
DI G+ VIRG +VV + L+
Sbjct: 60 LYCDIHLGLYVIRGENVVLIGELD 83
>gi|440804396|gb|ELR25273.1| u6 snrnaassociated sm-like protein lsm8, putative [Acanthamoeba
castellanii str. Neff]
Length = 94
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 10 LKKY--MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKNDIGMVVIR 63
L+ Y +D+ + I + R IVGTLRGFDQF N++++++ E G EK +G+ VIR
Sbjct: 2 LRTYNEIDRTVSIITSDARSIVGTLRGFDQFANVIVEDSHERVYSAQGMEKVPLGLYVIR 61
Query: 64 GNSVVTVEAL 73
G+++ + L
Sbjct: 62 GDNIAVIGEL 71
>gi|389585573|dbj|GAB68303.1| U6 snRNA-associated Sm-like protein LSm7 [Plasmodium cynomolgi
strain B]
Length = 114
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
D+KK+M++K+++K + R +VG L G D NLV+D T E V + IG+
Sbjct: 19 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEYIRDPNDSFVITEKTRSIGL 78
Query: 60 VVIRGNSVVT----VEALEPVSKSQ 80
VV RG SV++ + + PV +Q
Sbjct: 79 VVARGTSVLSFFRHIALITPVDGTQ 103
>gi|336270688|ref|XP_003350103.1| hypothetical protein SMAC_00994 [Sordaria macrospora k-hell]
gi|380095497|emb|CCC06970.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 96
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 47/74 (63%), Gaps = 13/74 (17%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-------NGNEKNDIG 58
Q ++ ++ ++L I+ I+GT+RGFD+FMNLVIDN +EV E+ ++G
Sbjct: 26 QHSTVQIWLYEQLHIR------IIGTIRGFDEFMNLVIDNAIEVKLVSKTNEKEERRELG 79
Query: 59 MVVIRGNSVVTVEA 72
++++G++V +++
Sbjct: 80 QILLKGDNVSLIQS 93
>gi|406696065|gb|EKC99361.1| RNA cap binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 113
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 7/84 (8%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKN--D 56
+ SG DL +DKK+ + L R ++G LR +DQF N ++++TVE NG E D
Sbjct: 7 FTTSGSLVDL---VDKKVLVVLRDGRKLIGVLRSYDQFANFLLESTVERLYNGFEFADID 63
Query: 57 IGMVVIRGNSVVTVEALEPVSKSQ 80
IG+++IRG +VV + ++ +++ +
Sbjct: 64 IGVLLIRGENVVALGEIDLIAEDE 87
>gi|209738386|gb|ACI70062.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-----NGNEKNDIGMVVIRG 64
L+ Y+++ + I + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHECVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTV 70
++V +
Sbjct: 65 DNVAVI 70
>gi|401426935|ref|XP_003877951.1| putative small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494198|emb|CBZ29495.1| putative small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 81
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE------VNGNEKNDIGMVV 61
P+L +M+K++ +K+ R I G LRG D+ M++V+ + ++ V+G + +G V
Sbjct: 8 PNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRNAAVSGEARMALGTTV 67
Query: 62 IRGNSVVTV 70
IRG+++V +
Sbjct: 68 IRGSAIVEI 76
>gi|343426809|emb|CBQ70337.1| probable U6 snRNA-associated Sm-like protein LSm6 [Sporisorium
reilianum SRZ2]
Length = 80
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 3 RSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMV 60
++G P D LK + K + ++LN+ G L D +MN+ ++ TVE V+G +KN G
Sbjct: 6 KAGSPNDFLKGVIGKSVNVRLNSGIDYRGVLSCLDGYMNIALEQTVEYVDGVQKNSYGDA 65
Query: 61 VIRGNSVVTVEALE 74
IRGN+V+ + ALE
Sbjct: 66 FIRGNNVMYITALE 79
>gi|388508644|gb|AFK42388.1| unknown [Medicago truncatula]
Length = 128
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+DKKL + L R ++G LR FDQF N+V+ E + G+ D+ G+ VIRG
Sbjct: 15 LATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLKGACERVIVGDLYCDVPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|71026359|ref|XP_762856.1| U6 snRNA-associated protein [Theileria parva strain Muguga]
gi|68349808|gb|EAN30573.1| U6 snRNA-associated protein, putative [Theileria parva]
Length = 104
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
+L K+++K++ +K + R + G LRG D NLV+D+TVE + EK ++G+
Sbjct: 16 NLNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEYLKDSSDSSKLTGEKRNLGL 75
Query: 60 VVIRGNSVVTVEALEPVSK 78
+V RG SV V +E K
Sbjct: 76 LVARGTSVTVVYPVEGTEK 94
>gi|389738918|gb|EIM80113.1| U6 snRNA-associated Sm-like protein LSm7, partial [Stereum
hirsutum FP-91666 SS1]
Length = 99
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNT---VEVNGNEKNDIGMVVIRGN 65
DL KY+++++++K R + G L+G+DQ +NLV+D V+ +G+ V+RG
Sbjct: 18 DLSKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVQEEVQEPTPHTRSLGLTVLRGP 77
Query: 66 SVV---TVEALEPVS 77
++ V+ LE ++
Sbjct: 78 TITLLSPVDGLEEIA 92
>gi|386875009|ref|ZP_10117213.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
gi|386807169|gb|EIJ66584.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
Length = 74
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGNSV 67
L + +D+ + IKL ++ I GTL GFDQ MNL++D++ E+ G+ K+ +G +V+RG++V
Sbjct: 6 LDESIDQVVLIKLKGSKTIRGTLLGFDQHMNLLLDSSEEIPAEGDSKS-LGTIVVRGDNV 64
Query: 68 VTV 70
V +
Sbjct: 65 VMI 67
>gi|154421794|ref|XP_001583910.1| Sm protein [Trichomonas vaginalis G3]
gi|121918154|gb|EAY22924.1| Sm protein [Trichomonas vaginalis G3]
Length = 81
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 1 MSRSGQP-PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGM 59
M+++ P P+LK ++ K+++I LN +R + G L GFD FMNL I + +K +
Sbjct: 5 MTQAQPPYPELKGHLQKQVKIMLNKDREVSGILTGFDHFMNLTIRDAQIKTPYDKAPVFC 64
Query: 60 --VVIRGNSVVTVEAL 73
VIRG +++VE L
Sbjct: 65 NSCVIRGTMILSVETL 80
>gi|281207655|gb|EFA81835.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 110
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL+K++ K L +K R + G L+G+D +N+ +DN E + EK +G+
Sbjct: 14 DLQKFLGKGLTVKFTGGREVQGILKGYDPLVNITLDNCEEFIRDPQDPLSLTGEKRYLGL 73
Query: 60 VVIRGNSVVTVEALE 74
VV RG+SV+ V +E
Sbjct: 74 VVCRGSSVMMVCPME 88
>gi|18394697|ref|NP_564072.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
gi|15724180|gb|AAL06482.1|AF411792_1 At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|20334848|gb|AAM16180.1| At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|332191686|gb|AEE29807.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
Length = 128
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+DKKL + L R ++G LR FDQF N V++ E + G+ DI G+ +IRG
Sbjct: 15 LAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDLYCDIPLGLYIIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|241956256|ref|XP_002420848.1| small nuclear ribonucleoprotein E (snRNP-E), putative [Candida
dubliniensis CD36]
gi|223644191|emb|CAX41000.1| small nuclear ribonucleoprotein E (snRNP-E), putative [Candida
dubliniensis CD36]
Length = 86
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 38/47 (80%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMN+VID+ VE++ +K+++G ++++G+++ + +L+
Sbjct: 39 IQGKIRGFDEFMNIVIDDAVELSNGKKSELGRILLKGDNITLISSLD 85
>gi|353234457|emb|CCA66482.1| related to snRNP protein [Piriformospora indica DSM 11827]
Length = 158
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN--DIGMVVIRGN 65
DL KY+ K+++ R + G L+GFDQ +NLV+D E V+ ++N +G+ V+RG
Sbjct: 78 DLSKYVGSKVRVTFTGGRQVTGILKGFDQLLNLVLDQVEEQVSELQQNPRQLGLAVVRGP 137
Query: 66 SVVTV 70
+V +
Sbjct: 138 TVTLI 142
>gi|189028854|sp|Q4PG71.2|LSM6_USTMA RecName: Full=U6 snRNA-associated Sm-like protein LSm6
Length = 85
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 2 SRSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
+++G P D LK + K + ++LN+ G L D +MN+ ++ TVE V+G +KN G
Sbjct: 10 AKAGSPNDFLKGVIGKNVNVRLNSGIDYRGVLSCLDGYMNIALEQTVEYVDGIKKNSYGD 69
Query: 60 VVIRGNSVVTVEALE 74
IRGN+V+ + ALE
Sbjct: 70 AFIRGNNVMYITALE 84
>gi|71663496|ref|XP_818740.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma cruzi strain CL
Brener]
gi|70884008|gb|EAN96889.1| small nuclear ribonucleoprotein Sm-G, putative [Trypanosoma
cruzi]
Length = 82
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-------EKNDIG 58
PP+L +M+K++ +KL R I G LRG D F+ +V+ + + + EK +G
Sbjct: 6 SPPNLNHFMEKRVVVKLQGGRSISGELRGVDNFLGVVLFDATDERPSFNNEENMEKVALG 65
Query: 59 MVVIRGNSVVTVEALE 74
VIRG ++V + LE
Sbjct: 66 TTVIRGTAIVEIVGLE 81
>gi|21537395|gb|AAM61736.1| unknown [Arabidopsis thaliana]
Length = 128
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+DKKL + L R ++G LR FDQF N V++ E + G+ DI G+ +IRG
Sbjct: 15 LAPYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDLYCDIPLGLYIIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|307177329|gb|EFN66502.1| U6 snRNA-associated Sm-like protein LSm7 [Camponotus floridanus]
Length = 111
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E + + +G+
Sbjct: 23 DLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNTKEYLRDPDDPYKLNQDTRMLGL 82
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 83 VVCRGTSVVLI 93
>gi|119872206|ref|YP_930213.1| like-Sm ribonucleoprotein, core [Pyrobaculum islandicum DSM 4184]
gi|119673614|gb|ABL87870.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
islandicum DSM 4184]
Length = 86
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN--GNEKNDIGMVVIRGNSV 67
L K ++K++ +L + GTL +D MNLV+DN E+N G G +V+RG+ V
Sbjct: 17 LTKMLNKEIVARLKGGVAVKGTLTAYDGCMNLVLDNAAELNNSGEPVTRYGRIVVRGSQV 76
Query: 68 VTVEALE 74
+ V ALE
Sbjct: 77 IYVSALE 83
>gi|449447922|ref|XP_004141715.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cucumis
sativus]
gi|449480489|ref|XP_004155908.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cucumis
sativus]
Length = 128
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+DKK+ + L R ++G LR FDQF N V++ + E + G+ +DI G+ VIRG
Sbjct: 15 LANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLLGELD 83
>gi|328875018|gb|EGG23383.1| hypothetical protein DFA_05515 [Dictyostelium fasciculatum]
Length = 897
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGMVVI 62
+Y++ +++I +N R+IVG FD+ MN+V+ + E + EK +GM+VI
Sbjct: 690 QYINYRMKITINDGRIIVGRFLAFDKHMNIVVCDAEEFRRIKQKGKEDREEKRTLGMLVI 749
Query: 63 RGNSVVTVEALEP 75
RG +V+++ A P
Sbjct: 750 RGETVISLSAESP 762
>gi|388851483|emb|CCF54885.1| probable U6 snRNA-associated Sm-like protein LSm6 [Ustilago
hordei]
Length = 85
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 3 RSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMV 60
++G P D LK + K + ++LN+ G L D +MN+ ++ TVE V+G +KN G
Sbjct: 11 KTGSPNDFLKGVIGKNVNVRLNSGIDYRGVLSCLDGYMNIALEQTVEYVDGVQKNSYGDA 70
Query: 61 VIRGNSVVTVEALE 74
IRGN+V+ + ALE
Sbjct: 71 FIRGNNVMYITALE 84
>gi|320169252|gb|EFW46151.1| LSM1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 137
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR FDQF NLV+ +T+E G+ DI G+ +IRG +VV
Sbjct: 16 LDKKLMVVLRDGRKLIGFLRSFDQFANLVLQDTIERIYVGDAYGDIPRGIFLIRGENVVL 75
Query: 70 V 70
+
Sbjct: 76 L 76
>gi|294941880|ref|XP_002783286.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239895701|gb|EER15082.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 139
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL++ M +++ +KL R + G L+GFD NLV+D ++E ++G +N +G
Sbjct: 50 DLERLMHQRVTVKLTGGREVSGVLKGFDPVPNLVLDESIEYLRDPEDPYKLSGKTRN-LG 108
Query: 59 MVVIRGNSVVTV 70
++V RG SVV V
Sbjct: 109 LLVARGTSVVLV 120
>gi|281346695|gb|EFB22279.1| hypothetical protein PANDA_002886 [Ailuropoda melanoleuca]
Length = 50
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 20 IKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVV 68
+KLN R + G LRGFD FMNLVID VE+ ++N+IGMVV + S +
Sbjct: 1 VKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVSKDRSFL 50
>gi|145349245|ref|XP_001419048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579279|gb|ABO97341.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 97
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVI 62
P L +D ++ + N R IVGTLRGFDQ N+++++ E +G E+ +G+ +I
Sbjct: 4 PTLTNMLDARVSVITNDGRHIVGTLRGFDQVTNVILEDCAERVYSSESGVEEAPLGVYMI 63
Query: 63 RGNSVVTV 70
RG++V V
Sbjct: 64 RGDNVALV 71
>gi|384249031|gb|EIE22514.1| hypothetical protein COCSUDRAFT_83471 [Coccomyxa subellipsoidea
C-169]
Length = 125
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 1 MSRSGQPPD---LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNG--NE 53
MS PP L + +DK+L ++L R IVG LR FDQF NLV++ VE + G
Sbjct: 1 MSLDEVPPPGAALVEELDKRLLVQLRDGRKIVGILRSFDQFANLVLEGAVERIIVGILYA 60
Query: 54 KNDIGMVVIRGNSVVTV 70
++ +G+ V+RG +VV +
Sbjct: 61 EDPLGLYVVRGENVVLL 77
>gi|294886585|ref|XP_002771771.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239875533|gb|EER03587.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 129
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
DL++ M +++ +KL R + G L+GFD NLV+D ++E ++G +N +G
Sbjct: 35 DLERLMHQRVTVKLTGGREVSGVLKGFDPVPNLVLDESIEYLRDPEDPYKLSGKTRN-LG 93
Query: 59 MVVIRGNSVVTV 70
++V RG SVV V
Sbjct: 94 LLVARGTSVVLV 105
>gi|348521232|ref|XP_003448130.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oreochromis niloticus]
gi|410918466|ref|XP_003972706.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Takifugu rubripes]
gi|432943853|ref|XP_004083300.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oryzias latipes]
Length = 96
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + I + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDS 79
>gi|326666504|ref|XP_694374.3| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Danio rerio]
Length = 96
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+ + + I + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LESYIHRTVAIVTSDGRMIVGTLKGFDQAINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDS 79
>gi|294901650|ref|XP_002777457.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239885093|gb|EER09273.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 125
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 11/72 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----------NGNEKNDIG 58
DL++ M +++ +KL R + G L+GFD NLV+D ++E +G +N +G
Sbjct: 36 DLERLMHQRVTVKLTGGREVSGVLKGFDPVPNLVLDESIEYLRDPEDPYKPSGKTRN-LG 94
Query: 59 MVVIRGNSVVTV 70
++V RG SVV V
Sbjct: 95 LLVARGTSVVLV 106
>gi|448515624|ref|XP_003867376.1| Lsm7 protein [Candida orthopsilosis Co 90-125]
gi|380351715|emb|CCG21938.1| Lsm7 protein [Candida orthopsilosis]
Length = 124
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE------VNG---NEKNDIGM 59
DL KY D++++++ R + G L+G+DQ MNLV+++ E + G ++ ++G+
Sbjct: 37 DLNKYKDEEIRVRFVGGRKVTGILKGYDQLMNLVLEDVQEQLRDPVIEGRYLDKTRELGL 96
Query: 60 VVIRGNSVVTVEALEPVSKSQ 80
VV+R S++T+ PV S+
Sbjct: 97 VVVRCTSLLTI---SPVKGSE 114
>gi|402864615|ref|XP_003896552.1| PREDICTED: ankyrin repeat and KH domain-containing protein
mask-like [Papio anubis]
Length = 504
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 249 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 308
Query: 65 NSV 67
++V
Sbjct: 309 DNV 311
>gi|354547245|emb|CCE43979.1| hypothetical protein CPAR2_502040 [Candida parapsilosis]
Length = 124
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN---------DIGM 59
DL KY +++++++ R + G L+G+DQ MNLV+++ E + +N D+G+
Sbjct: 37 DLNKYKNEEIRVRFVGGRQVTGVLKGYDQLMNLVLEDVKEQFRDPENEGKYLDKTRDLGL 96
Query: 60 VVIRGNSVVTVEALEPVSKSQ 80
VV+R S++T+ PV S+
Sbjct: 97 VVVRCTSLLTI---SPVKGSE 114
>gi|209736546|gb|ACI69142.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + I + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTV 70
++V +
Sbjct: 65 DNVAVI 70
>gi|339237711|ref|XP_003380410.1| putative fibronectin type III domain protein [Trichinella
spiralis]
gi|316976745|gb|EFV59974.1| putative fibronectin type III domain protein [Trichinella
spiralis]
Length = 2755
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKN 55
+L Y++K L++K R I G L+G+DQ +NLV+DNT E V+GN N
Sbjct: 14 NLSNYIEKALRVKFQGGREITGILKGYDQLLNLVLDNTTEYLPDFVDGNLVN 65
>gi|213513122|ref|NP_001135313.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Salmo
salar]
gi|209731702|gb|ACI66720.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732172|gb|ACI66955.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732248|gb|ACI66993.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|303665717|gb|ADM16200.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + I + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTV 70
++V +
Sbjct: 65 DNVAVI 70
>gi|154343057|ref|XP_001567474.1| putative small nuclear ribonucleoprotein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064806|emb|CAM42912.1| putative small nuclear ribonucleoprotein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 82
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKND---IGMV 60
P+L +M+K++ +K+ R I G LRG D+ M++V+ N ++ NG+++ +G
Sbjct: 8 PNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHNAMDETRNANGSDEGTMTALGTT 67
Query: 61 VIRGNSVVTVEALE 74
VIRG++VV + + +
Sbjct: 68 VIRGSAVVEITSAD 81
>gi|254565605|ref|XP_002489913.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029709|emb|CAY67632.1| hypothetical protein PAS_chr1-1_0487 [Komagataella pastoris GS115]
gi|328350324|emb|CCA36724.1| U6 snRNA-associated Sm-like protein LSm7 [Komagataella pastoris CBS
7435]
Length = 156
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 9 DLKKYMDKKLQIKLNA---NRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRG 64
+L Y DK++++ + +R ++G L+G+DQ MNLV+D+ E+ EK +G V++RG
Sbjct: 67 NLANYKDKQIRLTFSGVHDSREVIGCLKGYDQLMNLVLDDAEEILKSTEKRTLGRVIVRG 126
Query: 65 NSVVTV 70
+V++
Sbjct: 127 PKLVSL 132
>gi|328858404|gb|EGG07517.1| hypothetical protein MELLADRAFT_35470 [Melampsora larici-populina
98AG31]
Length = 108
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN----DIGMVVIRG 64
DL KY+++++ +K R I G L+G+D +NLV+D E E+ +G+ VIRG
Sbjct: 26 DLSKYVNQRVIVKFMGGRQITGILKGYDGLLNLVMDEVEESLKPEETTKTRSLGLAVIRG 85
Query: 65 NSVVTVEALE 74
S+V + +E
Sbjct: 86 TSLVVISPVE 95
>gi|225708270|gb|ACO09981.1| U6 snRNA-associated Sm-like protein LSm8 [Osmerus mordax]
Length = 96
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + I + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LETYINRTVAIITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDS 79
>gi|145592526|ref|YP_001154528.1| like-Sm ribonucleoprotein, core [Pyrobaculum arsenaticum DSM
13514]
gi|379005495|ref|YP_005261167.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
gi|145284294|gb|ABP51876.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
arsenaticum DSM 13514]
gi|375160948|gb|AFA40560.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
Length = 86
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN--GNEKNDIGMVVIRGNSV 67
L K ++K++ KL I G L +D MNLV+D+ E++ G K G +V+RG+ V
Sbjct: 17 LTKMLNKEIVAKLKGGVAIKGVLTAYDGCMNLVLDSAAELDNSGEPKTRYGRIVVRGSQV 76
Query: 68 VTVEALE 74
+ V ALE
Sbjct: 77 IYVSALE 83
>gi|225709346|gb|ACO10519.1| U6 snRNA-associated Sm-like protein LSm7 [Caligus rogercresseyi]
Length = 112
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
+L KY++K +++K R GTL+G+D +NLV+DN E + + +G+
Sbjct: 25 ELAKYLEKDIRVKFIGGRECSGTLKGYDPLLNLVLDNVTEYLRDPDDPYKLTEDTRPLGL 84
Query: 60 VVIRGNSVVTV---EALEPVS 77
VV RG +V + E +E +S
Sbjct: 85 VVCRGTGIVLICPQEGMESIS 105
>gi|68062334|ref|XP_673172.1| u6 snRNA-associated Sm-like protein [Plasmodium berghei strain
ANKA]
gi|56490825|emb|CAH96266.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium
berghei]
Length = 108
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
D+KK+M++K+++K + R +VG L G D NLV+D T E V + +IG+
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEFIRDPNDSYVITEKSRNIGL 79
Query: 60 VVIRGNSVVTVEALEPVSKSQ 80
+V RG SV + PV+ +Q
Sbjct: 80 IVARGTSVALI---TPVNGTQ 97
>gi|332024943|gb|EGI65130.1| U6 snRNA-associated Sm-like protein LSm7 [Acromyrmex echinatior]
Length = 123
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND---------IGM 59
DL KY++K +++K R G L+G+D +NLV+DNT E + + +G+
Sbjct: 35 DLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNTKEYLRDPDDPYKLNQDTRMLGL 94
Query: 60 VVIRGNSVVTV 70
VV RG SVV +
Sbjct: 95 VVCRGTSVVLI 105
>gi|221059904|ref|XP_002260597.1| u6 snrna-associated sm-like protein [Plasmodium knowlesi strain
H]
gi|193810671|emb|CAQ42569.1| u6 snrna-associated sm-like protein [Plasmodium knowlesi strain
H]
Length = 107
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
D+KK+M++K+++K + R +VG L G D NLV+D T E V + IG+
Sbjct: 19 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEYIRDPNDSLVITEKTRSIGL 78
Query: 60 VVIRGNSVVTVEALEPVSKSQ 80
VV RG S+ + PV +Q
Sbjct: 79 VVARGTSIALI---TPVDGTQ 96
>gi|156101744|ref|XP_001616565.1| U6 snRNA-associated Sm-like protein LSm7 [Plasmodium vivax Sal-1]
gi|148805439|gb|EDL46838.1| U6 snRNA-associated Sm-like protein LSm7, putative [Plasmodium
vivax]
Length = 107
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
D+KK+M++K+++K + R +VG L G D NLV+D T E V + IG+
Sbjct: 19 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEYIRDPNDSFVITEKTRSIGL 78
Query: 60 VVIRGNSVVTVEALEPVSKSQ 80
VV RG S+ + PV +Q
Sbjct: 79 VVARGTSIALI---TPVDGTQ 96
>gi|414587041|tpg|DAA37612.1| TPA: hypothetical protein ZEAMMB73_983155 [Zea mays]
Length = 120
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L ++DKKL + L R ++GTL FDQF N+V+ E + G + D+ G+ VIRG
Sbjct: 15 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|257076591|ref|ZP_05570952.1| small nuclear ribonucleoprotein [Ferroplasma acidarmanus fer1]
Length = 84
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 2 SRSGQPP----DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE-KND 56
+RSG P LK ++K + I + NRM G L G+D +MNLV+ N E NE K
Sbjct: 5 NRSGYVPKPMETLKNSLEKNIMIDVKGNRMYSGILEGYDIYMNLVLKNATETINNENKGT 64
Query: 57 IGMVVIRGNSVVTV 70
M+++RG++++ V
Sbjct: 65 FSMMLLRGDNIIFV 78
>gi|13541906|ref|NP_111594.1| small nuclear ribonucleoprotein (snRNP)-like protein
[Thermoplasma volcanium GSS1]
gi|14325338|dbj|BAB60242.1| small nuclear ribonucleoprotein [Thermoplasma volcanium GSS1]
Length = 71
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVT 69
L++ ++K++ + L NR++ GTL G+D +MN+V+D+ E + N +G VVIRG++VV
Sbjct: 8 LEESVNKRVSLLLKDNRVLEGTLTGYDDYMNMVLDDVDENSENVSRKLGTVVIRGSNVVR 67
Query: 70 V 70
+
Sbjct: 68 I 68
>gi|388582146|gb|EIM22452.1| RNA cap binding protein [Wallemia sebi CBS 633.66]
Length = 146
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNG-NEKNDI- 57
+ SGQ L +DKK+ + L R I+G LR FDQF NLV+++ VE ++ NE DI
Sbjct: 7 FTTSGQ---LLNCVDKKMLVALRDGRKIIGVLRSFDQFANLVLNDAVERIHALNEYADIP 63
Query: 58 -GMVVIRGNSVV 68
G+ +IRG +VV
Sbjct: 64 RGIFLIRGENVV 75
>gi|358058374|dbj|GAA95893.1| hypothetical protein E5Q_02551 [Mixia osmundae IAM 14324]
Length = 197
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 10/72 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
+L KY D+++++K R + G L+G DQ MN+V+D+ E ++ + +G
Sbjct: 108 ELSKYRDQRIRVKFLGGREVTGVLKGSDQLMNMVLDDVQELVRDPDTLAPLDPAQYRSLG 167
Query: 59 MVVIRGNSVVTV 70
+ VIRG ++V +
Sbjct: 168 LTVIRGTAIVVI 179
>gi|238882171|gb|EEQ45809.1| predicted protein [Candida albicans WO-1]
Length = 68
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG-NEKNDIGMVV 61
MDKKL I+LN +R I+G LRG+D F+N+ + + +EV+ EK +IG V
Sbjct: 1 MDKKLSIQLNGSRKIIGILRGYDIFLNITLTDALEVDSKGEKMNIGATV 49
>gi|255724404|ref|XP_002547131.1| predicted protein [Candida tropicalis MYA-3404]
gi|240135022|gb|EER34576.1| predicted protein [Candida tropicalis MYA-3404]
Length = 62
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG-NEKNDIGMVVIR 63
MDKK+ ++LN +R I+G L+G+D F+N+ + N +EV+ E +IG+ V R
Sbjct: 1 MDKKISVQLNGSRKIIGILKGYDIFLNITVTNALEVDSKGEHLNIGVTVCR 51
>gi|123340850|ref|XP_001294570.1| Sm protein [Trichomonas vaginalis G3]
gi|121872657|gb|EAX81640.1| Sm protein [Trichomonas vaginalis G3]
Length = 81
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 1 MSRSGQP-PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGM 59
M+++ P P+LK ++ KK++I N +R + G L GFD FMNL I + +K +
Sbjct: 5 MTQAQPPYPELKGHLQKKVKIMSNKDREVSGILTGFDHFMNLTIRDAQIKTPYDKAPVFC 64
Query: 60 --VVIRGNSVVTVEAL 73
VIRG +++VE L
Sbjct: 65 NSCVIRGTMILSVETL 80
>gi|159469406|ref|XP_001692854.1| Sm protein LSm1 [Chlamydomonas reinhardtii]
gi|158277656|gb|EDP03423.1| Sm protein LSm1 [Chlamydomonas reinhardtii]
Length = 126
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +D++L + L R ++GTLR FDQF NLVI+ VE + G + DI G+ +IR
Sbjct: 14 LAEELDQRLLVVLRDGRKLLGTLRSFDQFANLVIEGAVERIIVGEQFGDIPMGLQIIRAE 73
Query: 66 SVVTV 70
+VV +
Sbjct: 74 NVVLL 78
>gi|238007068|gb|ACR34569.1| unknown [Zea mays]
gi|414587040|tpg|DAA37611.1| TPA: hypothetical protein ZEAMMB73_983155 [Zea mays]
Length = 102
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 4 SGQPPD-------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEK 54
S PD L ++DKKL + L R ++GTL FDQF N+V+ E + G +
Sbjct: 2 SWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQY 61
Query: 55 NDI--GMVVIRGNSVVTVEAL 73
D+ G+ VIRG +VV + L
Sbjct: 62 CDVPLGLYVIRGENVVLIGEL 82
>gi|225713984|gb|ACO12838.1| U6 snRNA-associated Sm-like protein LSm7 [Lepeophtheirus salmonis]
gi|290563008|gb|ADD38898.1| U6 snRNA-associated Sm-like protein LSm7 [Lepeophtheirus salmonis]
Length = 111
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
+L +Y++K +++K R GTL+G+D +NLV+DN E + + +G+
Sbjct: 24 ELARYLEKDIRVKFIGGRECSGTLKGYDPLLNLVLDNVTEYLRDPDDPYKLTEDTRPLGL 83
Query: 60 VVIRGNSVVTV---EALEPVS 77
VV RG +V + E +E +S
Sbjct: 84 VVCRGTGIVLICPQEGMESIS 104
>gi|209731736|gb|ACI66737.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y ++ + I + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LESYTNRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTV 70
++V +
Sbjct: 65 DNVAVI 70
>gi|109139334|gb|ABE96774.2| U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
Length = 126
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 35 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 94
Query: 65 NSVVTV 70
++V +
Sbjct: 95 DNVAVI 100
>gi|312380092|gb|EFR26184.1| hypothetical protein AND_26313 [Anopheles darlingi]
Length = 134
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L+ R ++G LR DQF NLV+ T+E GNE DI G+ +IRG +VV
Sbjct: 15 VDKKLMVLLHDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVL 74
Query: 70 V 70
+
Sbjct: 75 L 75
>gi|225716368|gb|ACO14030.1| U6 snRNA-associated Sm-like protein LSm8 [Esox lucius]
Length = 96
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LESYINRTVAVVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTV 70
++V +
Sbjct: 65 DNVAVI 70
>gi|449481053|ref|XP_004177250.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 96
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LETYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDS 79
>gi|167043902|gb|ABZ08590.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG3H9]
gi|167044597|gb|ABZ09270.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG7F11]
Length = 76
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVV 68
L + ++K + IKL N+ I G L GFDQ MNL++D E+ + + N +G +V+RG++VV
Sbjct: 10 LDESINKTVLIKLKGNKTIRGNLLGFDQHMNLLLDQAEEILSDGDSNSLGSLVVRGDNVV 69
Query: 69 TVE 71
+
Sbjct: 70 MIS 72
>gi|328869356|gb|EGG17734.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 106
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
DL+K++ K + +K R + G L+G+D +N+ +D E NEK +G+
Sbjct: 12 DLQKFLGKGISVKFTGGREVQGILKGYDPLVNITLDQCEEYIRDPQDPLNVTNEKRYLGL 71
Query: 60 VVIRGNSVVTVEALE 74
VV RG+SV+ V +E
Sbjct: 72 VVCRGSSVMMVCPME 86
>gi|119719338|ref|YP_919833.1| like-Sm ribonucleoprotein, core [Thermofilum pendens Hrk 5]
gi|119524458|gb|ABL77830.1| Like-Sm ribonucleoprotein, core [Thermofilum pendens Hrk 5]
Length = 73
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVT 69
L + ++K + +KL R I G L+ +D +NLV++N E+ G +G +++RG++V+
Sbjct: 9 LAESLEKNVLVKLKGGREIRGQLKSYDYHLNLVLENAEEIRGTRTRQLGTIIVRGDNVIL 68
Query: 70 V 70
V
Sbjct: 69 V 69
>gi|388508020|gb|AFK42076.1| unknown [Medicago truncatula]
Length = 99
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L Y+DKKL + L R ++G LR FDQF N+V++ E + G+ D+ G+ VIRG
Sbjct: 15 LATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRGG 74
Query: 66 SVV 68
Sbjct: 75 ECC 77
>gi|355706179|gb|AES02561.1| LSM8-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
Length = 99
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 9 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 68
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 69 DNVAVIGEIDEETDS 83
>gi|323448125|gb|EGB04028.1| hypothetical protein AURANDRAFT_33181 [Aureococcus
anophagefferens]
Length = 103
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 15/81 (18%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNG--------------NE 53
DL+K +DK++++K R + G L+GFDQ +N+V+DN VE ++G ++
Sbjct: 8 DLEKCIDKEVRVKFQGGREVRGVLKGFDQLVNIVLDNCVESMHGASARAHPDDPYRLTDK 67
Query: 54 KNDIGMVVIRGNSVVTVEALE 74
+G+VV RG V V ++
Sbjct: 68 TRKLGLVVCRGLQVSLVSPVD 88
>gi|291238793|ref|XP_002739308.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8-like
[Saccoglossus kowalevskii]
Length = 96
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ +IRG
Sbjct: 5 LEGYINHTISVVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIIRG 64
Query: 65 NSVVTV 70
+++ V
Sbjct: 65 DNIAVV 70
>gi|297275718|ref|XP_001117654.2| PREDICTED: hypothetical protein LOC721486 [Macaca mulatta]
Length = 151
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE 48
DL KY+DK +++K R G L+GFD +NLV+D T+E
Sbjct: 42 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIE 81
>gi|413918441|gb|AFW58373.1| hypothetical protein ZEAMMB73_585309 [Zea mays]
Length = 100
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 4 SGQPPD-------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEK 54
S PD L ++DKKL + L R ++GTL FDQF N+V+ E + G +
Sbjct: 2 SWSAPDDILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQY 61
Query: 55 NDI--GMVVIRGNSVVTVEAL 73
D+ G+ VIRG +VV + L
Sbjct: 62 CDVPLGLYVIRGENVVLIGEL 82
>gi|7706425|ref|NP_057284.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Homo
sapiens]
gi|19527156|ref|NP_598700.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Mus
musculus]
gi|77736425|ref|NP_001029912.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos taurus]
gi|157819253|ref|NP_001100055.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Rattus
norvegicus]
gi|197102128|ref|NP_001125239.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Pongo
abelii]
gi|388453491|ref|NP_001253526.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|57096120|ref|XP_532529.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Canis lupus familiaris]
gi|126340603|ref|XP_001364736.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Monodelphis domestica]
gi|194209825|ref|XP_001501036.2| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Equus caballus]
gi|291391224|ref|XP_002712161.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8 [Oryctolagus
cuniculus]
gi|296210100|ref|XP_002751829.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Callithrix jacchus]
gi|301764070|ref|XP_002917457.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ailuropoda melanoleuca]
gi|311275562|ref|XP_003134801.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|332224269|ref|XP_003261290.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Nomascus leucogenys]
gi|332869198|ref|XP_001141412.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan troglodytes]
gi|344270905|ref|XP_003407282.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Loxodonta africana]
gi|345783317|ref|XP_003432400.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Canis lupus familiaris]
gi|348578839|ref|XP_003475189.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cavia porcellus]
gi|350595285|ref|XP_003484077.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|395539266|ref|XP_003771593.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sarcophilus harrisii]
gi|395738892|ref|XP_003777165.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Pongo abelii]
gi|395833654|ref|XP_003789838.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Otolemur garnettii]
gi|397474452|ref|XP_003808693.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan paniscus]
gi|410952710|ref|XP_003983022.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
gi|426227909|ref|XP_004008057.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Ovis aries]
gi|426357668|ref|XP_004046156.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Gorilla gorilla gorilla]
gi|10720071|sp|O95777.3|NAA38_HUMAN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|52783125|sp|Q6ZWM4.3|NAA38_MOUSE RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|75055136|sp|Q5RCP3.3|NAA38_PONAB RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|115312132|sp|Q3ZCE0.3|NAA38_BOVIN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|5919157|gb|AAD56232.1|AF182294_1 U6 snRNA-associated Sm-like protein LSm8 [Homo sapiens]
gi|4309884|gb|AAD15542.1| similar to Schizosaccharomyces pombe splicing factor; similar to
PID:3395591 [Homo sapiens]
gi|12803805|gb|AAH02742.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|18044123|gb|AAH19458.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|18490261|gb|AAH22440.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|26353716|dbj|BAC40488.1| unnamed protein product [Mus musculus]
gi|51095108|gb|EAL24351.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|55727417|emb|CAH90464.1| hypothetical protein [Pongo abelii]
gi|73586551|gb|AAI02500.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|74198481|dbj|BAE39723.1| unnamed protein product [Mus musculus]
gi|90080802|dbj|BAE89882.1| unnamed protein product [Macaca fascicularis]
gi|119603943|gb|EAW83537.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
gi|148681914|gb|EDL13861.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|149065053|gb|EDM15129.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
gi|187469565|gb|AAI67094.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Rattus norvegicus]
gi|189065154|dbj|BAG34877.1| unnamed protein product [Homo sapiens]
gi|296488327|tpg|DAA30440.1| TPA: U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
gi|355747958|gb|EHH52455.1| hypothetical protein EGM_12900 [Macaca fascicularis]
gi|380813674|gb|AFE78711.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|383419121|gb|AFH32774.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|410208824|gb|JAA01631.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410256304|gb|JAA16119.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410288376|gb|JAA22788.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410353357|gb|JAA43282.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|431911774|gb|ELK13922.1| U6 snRNA-associated Sm-like protein LSm8 [Pteropus alecto]
gi|432103158|gb|ELK30417.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Myotis
davidii]
gi|440909990|gb|ELR59832.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos
grunniens mutus]
Length = 96
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDS 79
>gi|145489729|ref|XP_001430866.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397967|emb|CAK63468.1| unnamed protein product [Paramecium tetraurelia]
Length = 77
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVT 69
L K + ++ I + +R GTLRGFD F N+V++N +E++G +KN + +++ G +
Sbjct: 10 LDKAISSRVWILMKDDREFEGTLRGFDDFFNMVLENVIELDGGKKNKLESILLNGTQICL 69
Query: 70 V 70
+
Sbjct: 70 I 70
>gi|392563452|gb|EIW56631.1| U6 snRNA-associated Sm-like protein LSm7 [Trametes versicolor
FP-101664 SS1]
Length = 94
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKN-DIGMVVIR 63
DL KY+++++++K R + G L+G+DQ +NLV+D E +G ++G+VV+R
Sbjct: 11 DLAKYVNERIRVKFTGGREVTGILKGYDQLLNLVLDEVQENLQTPDGESTTRNLGLVVLR 70
Query: 64 GNSVVTVEALEPV 76
G T+ L PV
Sbjct: 71 GP---TITLLSPV 80
>gi|255727532|ref|XP_002548692.1| small nuclear ribonucleoprotein E [Candida tropicalis MYA-3404]
gi|240134616|gb|EER34171.1| small nuclear ribonucleoprotein E [Candida tropicalis MYA-3404]
Length = 86
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 35/47 (74%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMN+VID+ VE+ K ++G ++++G+++ + +L+
Sbjct: 39 IQGKIRGFDEFMNIVIDDAVEICNGNKEELGRILLKGDNITLISSLD 85
>gi|71027525|ref|XP_763406.1| small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|85000711|ref|XP_955074.1| small nuclear ribonucleoprotein (E) [Theileria annulata strain
Ankara]
gi|65303220|emb|CAI75598.1| small nuclear ribonucleoprotein (E), putative [Theileria
annulata]
gi|68350359|gb|EAN31123.1| small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 91
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 4/60 (6%)
Query: 17 KLQIKL--NANRMIVGTLRGFDQFMNLVIDNTVEVN--GNEKNDIGMVVIRGNSVVTVEA 72
++QI L N I GT+RGFD++MN+V+DN EV+ N K D+G ++++G+ + + A
Sbjct: 28 RVQIWLFDQPNTKIEGTIRGFDEYMNMVLDNATEVHVKKNVKKDVGRILLKGDCMTLISA 87
>gi|414587042|tpg|DAA37613.1| TPA: small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L ++DKKL + L R ++GTL FDQF N+V+ E + G + D+ G+ VIRG
Sbjct: 15 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|242073224|ref|XP_002446548.1| hypothetical protein SORBIDRAFT_06g017930 [Sorghum bicolor]
gi|195605684|gb|ACG24672.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|195619498|gb|ACG31579.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|241937731|gb|EES10876.1| hypothetical protein SORBIDRAFT_06g017930 [Sorghum bicolor]
gi|413918442|gb|AFW58374.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L ++DKKL + L R ++GTL FDQF N+V+ E + G + D+ G+ VIRG
Sbjct: 15 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|294659407|ref|XP_461772.2| DEHA2G05192p [Debaryomyces hansenii CBS767]
gi|199433937|emb|CAG90229.2| DEHA2G05192p [Debaryomyces hansenii CBS767]
Length = 90
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNE--KNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMN+VID+ +EVN N+ K ++G ++++G+++ + +L+
Sbjct: 41 IQGKIRGFDEFMNVVIDDAMEVNTNDGSKEELGRILLKGDNITLISSLD 89
>gi|330835854|ref|YP_004410582.1| like-Sm ribonucleoprotein, core [Metallosphaera cuprina Ar-4]
gi|329567993|gb|AEB96098.1| like-Sm ribonucleoprotein, core [Metallosphaera cuprina Ar-4]
Length = 75
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 20 IKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVVTVEALE 74
+KL N+ + G L+ +DQ MNLV+ ++VE+ N N++ +G +VIRG++V+ + ++
Sbjct: 19 VKLKGNKEVRGYLKSYDQHMNLVLSDSVEIQNNNDEKKMGTIVIRGDNVILISPIQ 74
>gi|226509658|ref|NP_001146909.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|195605102|gb|ACG24381.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L ++DKKL + L R ++GTL FDQF N+V+ E + G + D+ G+ VIRG
Sbjct: 15 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGGQYCDVPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|118082191|ref|XP_416009.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 2 [Gallus gallus]
gi|326911334|ref|XP_003202015.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Meleagris gallopavo]
Length = 96
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDS 79
>gi|402871713|ref|XP_003899798.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Papio anubis]
Length = 96
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+D+ + + + RMIVGTL+GFDQ +NL++D + E G ++ +G+ ++RG
Sbjct: 5 LENYVDRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVKQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDS 79
>gi|320170227|gb|EFW47126.1| hypothetical protein CAOG_05070 [Capsaspora owczarzaki ATCC
30864]
Length = 95
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIRG 64
L++ + K+ + R+ VGTLRGFDQ N+++++TVE N + + G+ +I+G
Sbjct: 4 LEELLQSKVLVATTDGRIFVGTLRGFDQMCNIILEHTVEREFNAQRGVVIVALGLYIIKG 63
Query: 65 NSVVTVEALEP 75
++ V +++P
Sbjct: 64 ENIAVVGSVDP 74
>gi|219117519|ref|XP_002179554.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409445|gb|EEC49377.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 165
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 15/83 (18%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDN-----TVEVNGN--------EKND 56
L +Y++ +L++ L+ R IVGT FD+ +NLV+ T++ G EK
Sbjct: 9 LLRYVEHRLRVTLHDGRSIVGTFLAFDKHLNLVLSEAEEFRTLKSKGGAALLEERTEKRS 68
Query: 57 IGMVVIRGNSVVT--VEALEPVS 77
+G+V+IRG +VV+ VE P S
Sbjct: 69 LGLVLIRGENVVSLAVEGPPPPS 91
>gi|353228992|emb|CCD75163.1| family S9 non-peptidase homologue (S09 family) [Schistosoma
mansoni]
Length = 105
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK++++K + R VG L+G D N+VID T E + + ++ +
Sbjct: 18 DLNKYIDKRIRVKFSGGREAVGILKGCDNLQNMVIDCTTEFLRDPDDPHRLTEDTRELAL 77
Query: 60 VVIRGNSVVTV 70
VV RG SV V
Sbjct: 78 VVCRGPSVELV 88
>gi|16081975|ref|NP_394385.1| hypothetical protein Ta0927 [Thermoplasma acidophilum DSM 1728]
gi|10640204|emb|CAC12056.1| hypothetical protein [Thermoplasma acidophilum]
Length = 67
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 43/61 (70%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVT 69
L++ ++K++ + L NR++ G L GFD++MN+V+D+ E + N +G VV+RG++VV
Sbjct: 4 LEESVNKRVSLLLKDNRVLEGVLTGFDEYMNMVLDDVDENSENVSRKLGTVVVRGSNVVR 63
Query: 70 V 70
+
Sbjct: 64 I 64
>gi|300175124|emb|CBK20435.2| unnamed protein product [Blastocystis hominis]
Length = 82
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 11/69 (15%)
Query: 22 LNANRMIVGTLRGFDQFMNLVIDNTV----------EVNGNEKNDIGMVVIRGNSVVTVE 71
+ R IVG L+GFD MN+V+D V E+NG E+ +GMV+ RG +++TV
Sbjct: 1 MQGGREIVGILKGFDSLMNIVLDEAVEYMRELDDPYELNG-EQRTLGMVICRGTTIMTVN 59
Query: 72 ALEPVSKSQ 80
+E +++ Q
Sbjct: 60 PVEGMTEIQ 68
>gi|84995270|ref|XP_952357.1| small nuclear ribonucleoprotein associated protein b [Theileria
annulata strain Ankara]
gi|65302518|emb|CAI74625.1| small nuclear ribonucleoprotein associated protein b, putative
[Theileria annulata]
Length = 155
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN---GNEKN------DIGMV 60
++ ++ +++ L NR VGTL FD++MNLV+ + E G +KN +G V
Sbjct: 8 MQHWLQYNVRVTLKDNRKFVGTLVAFDKYMNLVLSDCEEFRMTLGKDKNRTEVKRTLGFV 67
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
++RG ++V+ A PV+ Q
Sbjct: 68 LLRGENIVSFTAKSPVNVPQ 87
>gi|66770685|gb|AAY54654.1| IP04948p [Drosophila melanogaster]
Length = 137
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF NLV+ T+E GNE DI G+ +IRG
Sbjct: 13 LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGE 72
Query: 66 SVVTV 70
+VV +
Sbjct: 73 NVVLL 77
>gi|409076181|gb|EKM76554.1| hypothetical protein AGABI1DRAFT_131111 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 130
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGN 52
DL KY+++ +++K R +VGTL+G+DQ +NLV+D+ E + GN
Sbjct: 45 DLAKYVNEPIRVKFMGGREVVGTLKGYDQLLNLVLDDVQEQIQGN 89
>gi|412991296|emb|CCO16141.1| U6 snRNA-associated Sm-like protein LSm8 [Bathycoccus prasinos]
Length = 96
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
LK +++ + I N R IVG LRGFDQ NL+++N E NG E +G+ V+RG
Sbjct: 5 LKPFLNSVISIITNDGRHIVGHLRGFDQQTNLIVENCHERVYSMENGVEMAPLGLYVVRG 64
Query: 65 NSVVTV 70
++V V
Sbjct: 65 DNVALV 70
>gi|330806057|ref|XP_003290991.1| hypothetical protein DICPUDRAFT_38323 [Dictyostelium purpureum]
gi|325078869|gb|EGC32498.1| hypothetical protein DICPUDRAFT_38323 [Dictyostelium purpureum]
Length = 98
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL++++ K++ +K R + G L+G+DQ +N+ +D T E + +E +G+
Sbjct: 15 DLQRFLGKEICVKFTGGREVQGILKGYDQLVNITLDQTKEFIRDPIDPLIVTDETRFLGL 74
Query: 60 VVIRGNSVVTVEALE 74
VV RG+SV+ V E
Sbjct: 75 VVCRGSSVMMVCPTE 89
>gi|395327701|gb|EJF60098.1| LSM-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 96
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 9/74 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN-----DIGMVVI 62
DL KY+++++++K R + G L+G+DQ +NLV+D E + G + ++G+VV+
Sbjct: 11 DLAKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVQENLQGLPEGQPTTRNLGLVVL 70
Query: 63 RGNSVVTVEALEPV 76
RG T+ L PV
Sbjct: 71 RGP---TITLLSPV 81
>gi|195025615|ref|XP_001986091.1| GH21171 [Drosophila grimshawi]
gi|193902091|gb|EDW00958.1| GH21171 [Drosophila grimshawi]
Length = 137
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF NLV+ T+E GNE DI G+ +IRG
Sbjct: 13 LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGE 72
Query: 66 SVVTV 70
+VV +
Sbjct: 73 NVVLL 77
>gi|426193423|gb|EKV43356.1| hypothetical protein AGABI2DRAFT_121482 [Agaricus bisporus var.
bisporus H97]
Length = 127
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGN 52
DL KY+++ +++K R +VGTL+G+DQ +NLV+D+ E + GN
Sbjct: 45 DLAKYVNEPIRVKFMGGREVVGTLKGYDQLLNLVLDDVQEQIQGN 89
>gi|195429567|ref|XP_002062829.1| GK19486 [Drosophila willistoni]
gi|194158914|gb|EDW73815.1| GK19486 [Drosophila willistoni]
Length = 137
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF NLV+ T+E GNE DI G+ +IRG
Sbjct: 13 LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGE 72
Query: 66 SVVTV 70
+VV +
Sbjct: 73 NVVLL 77
>gi|194881822|ref|XP_001975020.1| GG20797 [Drosophila erecta]
gi|190658207|gb|EDV55420.1| GG20797 [Drosophila erecta]
Length = 137
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF NLV+ T+E GNE DI G+ +IRG
Sbjct: 13 LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGE 72
Query: 66 SVVTV 70
+VV +
Sbjct: 73 NVVLL 77
>gi|24656769|ref|NP_611559.1| LSm1 [Drosophila melanogaster]
gi|195346337|ref|XP_002039722.1| GM15742 [Drosophila sechellia]
gi|195486602|ref|XP_002091574.1| GE13737 [Drosophila yakuba]
gi|195585326|ref|XP_002082440.1| GD25220 [Drosophila simulans]
gi|7291257|gb|AAF46688.1| LSm1 [Drosophila melanogaster]
gi|66770707|gb|AAY54665.1| IP04848p [Drosophila melanogaster]
gi|194135071|gb|EDW56587.1| GM15742 [Drosophila sechellia]
gi|194177675|gb|EDW91286.1| GE13737 [Drosophila yakuba]
gi|194194449|gb|EDX08025.1| GD25220 [Drosophila simulans]
gi|220951410|gb|ACL88248.1| CG4279-PA [synthetic construct]
Length = 137
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF NLV+ T+E GNE DI G+ +IRG
Sbjct: 13 LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGE 72
Query: 66 SVVTV 70
+VV +
Sbjct: 73 NVVLL 77
>gi|194754723|ref|XP_001959644.1| GF12971 [Drosophila ananassae]
gi|195123083|ref|XP_002006039.1| GI18766 [Drosophila mojavensis]
gi|190620942|gb|EDV36466.1| GF12971 [Drosophila ananassae]
gi|193911107|gb|EDW09974.1| GI18766 [Drosophila mojavensis]
Length = 137
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF NLV+ T+E GNE DI G+ +IRG
Sbjct: 13 LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGE 72
Query: 66 SVVTV 70
+VV +
Sbjct: 73 NVVLL 77
>gi|219127194|ref|XP_002183825.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404548|gb|EEC44494.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 100
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 45/70 (64%), Gaps = 10/70 (14%)
Query: 13 YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG--NEKNDIGMVVIRGNSVVTV 70
Y D +LQI+ G + GFD++MN+V+D+ VE++ N + ++G ++++G++V +
Sbjct: 32 YEDSRLQIE--------GQIIGFDEYMNMVMDDAVEIDSKKNVRQEVGRILLKGDAVTMI 83
Query: 71 EALEPVSKSQ 80
+ +PV ++
Sbjct: 84 QEAQPVRPAE 93
>gi|242002636|ref|XP_002435961.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|215499297|gb|EEC08791.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|442754057|gb|JAA69188.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
gi|442754059|gb|JAA69189.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
Length = 96
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y++ + I R IVGTL+GFDQ +NL++D + E +G E+ +G+ ++RG
Sbjct: 5 LENYVNHTVSIITADGRHIVGTLKGFDQTINLILDESHERVYSSAHGVEQVLLGLYIVRG 64
Query: 65 NSVVTV 70
++VV V
Sbjct: 65 DNVVLV 70
>gi|170047804|ref|XP_001851399.1| CaSm [Culex quinquefasciatus]
gi|167870086|gb|EDS33469.1| CaSm [Culex quinquefasciatus]
Length = 134
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQF NLV+ T+E GNE DI G+ +IRG +VV
Sbjct: 15 VDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVL 74
Query: 70 V 70
+
Sbjct: 75 L 75
>gi|209731758|gb|ACI66748.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + I + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++ G
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVGG 64
Query: 65 NSVVTVEALEPVSKSQ 80
++VV + ++ + S
Sbjct: 65 DNVVVIGEIDEDTDSS 80
>gi|403256938|ref|XP_003921099.1| PREDICTED: ankyrin repeat domain-containing protein 7 [Saimiri
boliviensis boliviensis]
Length = 260
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSV 67
++V
Sbjct: 65 DNV 67
>gi|452077675|gb|AGF93625.1| like-Sm ribonucleoprotein, eukaryotic and archaea-type, core
[uncultured organism]
Length = 73
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVT 69
L + +D ++++ L ++ GTL GFD MNLV+++T E + + IG +++RGN+VVT
Sbjct: 10 LNENLDTEVELLLKDGSILKGTLIGFDDHMNLVLEDTEEKKEDSRRRIGTIILRGNNVVT 69
Query: 70 V 70
+
Sbjct: 70 L 70
>gi|260814225|ref|XP_002601816.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
gi|229287118|gb|EEN57828.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-----NGNEKNDIGMVVIRG 64
L+ Y++K + + + RMIVGTL+GFDQ NL++D + E G E+ +G+ +IRG
Sbjct: 5 LEDYVNKTVSVITSDGRMIVGTLKGFDQTTNLILDESHERVFSSGQGVEQVVLGLYIIRG 64
Query: 65 NSVVTV 70
+++ V
Sbjct: 65 DNIAVV 70
>gi|346470191|gb|AEO34940.1| hypothetical protein [Amblyomma maculatum]
gi|346470193|gb|AEO34941.1| hypothetical protein [Amblyomma maculatum]
gi|427786053|gb|JAA58478.1| Putative small nuclear ribonucleoprotein splicing factor
[Rhipicephalus pulchellus]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-----NGNEKNDIGMVVIRG 64
L+ Y++ + I R IVGTL+GFDQ +NL++D + E +G E+ +G+ ++RG
Sbjct: 5 LEGYVNHTVSIITADGRHIVGTLKGFDQTINLILDESHERVYSSDHGVEQVPLGLYIVRG 64
Query: 65 NSVVTV 70
++VV V
Sbjct: 65 DNVVVV 70
>gi|157136994|ref|XP_001656966.1| Sm protein G, putative [Aedes aegypti]
gi|108884233|gb|EAT48458.1| AAEL000478-PA [Aedes aegypti]
Length = 160
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQF NLV+ T+E GNE DI G+ +IRG +VV
Sbjct: 41 VDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVL 100
Query: 70 V 70
+
Sbjct: 101 L 101
>gi|333449461|gb|AEF33416.1| U6 snRNA-associated Sm-like protein LSm8 [Crassostrea ariakensis]
Length = 96
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + I R+IVGTL+GFDQ +NL++D + E G E+ +G+ +IRG
Sbjct: 5 LESYVNRTVSIVTADGRIIVGTLKGFDQTINLILDESHERVFSTTQGVEQVILGLYIIRG 64
Query: 65 NSVVTV 70
++V +
Sbjct: 65 DNVAVI 70
>gi|167520007|ref|XP_001744343.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777429|gb|EDQ91046.1| predicted protein [Monosiga brevicollis MX1]
Length = 126
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND--IGMVVIRGNSVV 68
+DKKL L R ++G LR DQF NLV+ +TVE GNE D +G+ +IRG +V
Sbjct: 20 LDKKLICVLRDGRKLIGYLRSVDQFANLVLQDTVERYYVGNEYGDVPVGIYIIRGENVA 78
>gi|302348719|ref|YP_003816357.1| hypothetical protein ASAC_0920 [Acidilobus saccharovorans 345-15]
gi|302329131|gb|ADL19326.1| hypothetical protein ASAC_0920 [Acidilobus saccharovorans 345-15]
Length = 78
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVT 69
+ +Y++ + +KL + G L+ FDQ +NLV++N E+ +G V++RG+S+V
Sbjct: 14 MNEYLNASVYVKLKGGEGVKGVLKSFDQHLNLVLENAEELTERGSRSLGTVLVRGDSIV- 72
Query: 70 VEALEPV 76
A+ PV
Sbjct: 73 --AISPV 77
>gi|290562435|gb|ADD38614.1| U6 snRNA-associated Sm-like protein LSm1 [Lepeophtheirus
salmonis]
Length = 138
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQ+ NLV+ +E GN+ DI G+ V+RG +VV
Sbjct: 16 LDKKLMVLLRDGRTLIGILRSVDQYANLVLHRAIERIHVGNDYGDIPRGIFVVRGENVVL 75
Query: 70 VEALEPVSKSQ 80
+ ++ V +S+
Sbjct: 76 LGEIDEVRESE 86
>gi|440294421|gb|ELP87438.1| snrnp sm protein, putative [Entamoeba invadens IP1]
Length = 79
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 2 SRSGQPPDLKKY-MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60
++ +P DL K +D+ + +KL NR + G LR FDQ +NLV+ E + D ++
Sbjct: 4 TKVEEPIDLVKLSLDEVVLVKLRGNRQLKGKLRAFDQHLNLVLTEVTETYNSVSRDFPVL 63
Query: 61 VIRGNSVVTV 70
IRG+ VV V
Sbjct: 64 YIRGDLVVIV 73
>gi|149034481|gb|EDL89218.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 91
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE 48
DL KY+DK +++K R G L+GFD +NLV+D T+E
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIE 53
>gi|118398961|ref|XP_001031807.1| Sm protein [Tetrahymena thermophila]
gi|89286141|gb|EAR84144.1| Sm protein [Tetrahymena thermophila SB210]
Length = 159
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG-----------NEKNDIGMV 60
+++D ++++ + RM+VGT FD+ +NLV+ T E K +G+V
Sbjct: 9 QWIDYRVRVTIQDGRMLVGTFLAFDKHLNLVLSETEEFRPIKPKTKGEPERQTKRILGLV 68
Query: 61 VIRGNSVVTVEALEPVSK 78
+IRG ++V++ A P S+
Sbjct: 69 IIRGENIVSINAEAPPSQ 86
>gi|209881614|ref|XP_002142245.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209557851|gb|EEA07896.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 155
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN---------DIGMV 60
++KY++ ++++ + +RM+VG L FD+ MN+V+ + E +K +G +
Sbjct: 1 MQKYINYRVRVTVQDDRMLVGNLMAFDKHMNVVLSDCQEYRSIKKKGEDLKEVKRSLGFI 60
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
V+RG ++VT+ A P KSQ
Sbjct: 61 VLRGENIVTITAEAP-PKSQ 79
>gi|221504537|gb|EEE30210.1| lsm1, putative [Toxoplasma gondii VEG]
Length = 335
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 4 SGQP---PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND-- 56
SG P L++ +DKKL + L R ++G LR FDQF NLV++ TV+ V N D
Sbjct: 213 SGMPNWITALEEELDKKLLVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLY 272
Query: 57 IGMVVIRGNSVVTVEALE 74
+G +++RG++++ A++
Sbjct: 273 LGCMIVRGDNMILFGAVD 290
>gi|209733618|gb|ACI67678.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LESYINRTVATVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKSQ 80
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEDTDSS 80
>gi|147904722|ref|NP_001084715.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Xenopus
laevis]
gi|46329906|gb|AAH68881.1| MGC82379 protein [Xenopus laevis]
Length = 96
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LENYINRTVAVITADGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKSQ 80
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDSS 80
>gi|344231123|gb|EGV63005.1| LSM-domain-containing protein [Candida tenuis ATCC 10573]
Length = 90
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNE--KNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMN+V+D+ +EV+ + K D+G ++++G+++ + +LE
Sbjct: 41 IEGKIRGFDEFMNIVLDDAIEVSTKDGSKEDLGRIMLKGDNITLISSLE 89
>gi|119569838|gb|EAW49453.1| hCG2041295 [Homo sapiens]
Length = 107
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIG 58
MDKKL +KLN R + G L+GFD F NLVID VE +++N IG
Sbjct: 1 MDKKL-LKLNGGRHVKGILQGFDHFTNLVIDECVEMATSDQQNKIG 45
>gi|300176167|emb|CBK23478.2| unnamed protein product [Blastocystis hominis]
Length = 234
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 17/76 (22%)
Query: 13 YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE------------VNG-----NEKN 55
Y++ ++++ + NR++VGTL FD+ MNL++ + E VNG EKN
Sbjct: 4 YVNYRMRVVIRENRVLVGTLMAFDKHMNLILGDCEEFRKIRSKSGVAVVNGVIEEREEKN 63
Query: 56 DIGMVVIRGNSVVTVE 71
+G+V++RG ++V+++
Sbjct: 64 TLGLVLLRGENIVSLQ 79
>gi|91093274|ref|XP_971370.1| PREDICTED: similar to LSM1-like protein [Tribolium castaneum]
gi|270016827|gb|EFA13273.1| hypothetical protein TcasGA2_TC001544 [Tribolium castaneum]
Length = 136
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQF NLV+ +T+E G E DI G+ ++RG +VV
Sbjct: 16 LDKKLMVLLRDGRTLIGYLRSVDQFANLVLHHTIERIHVGKEYGDIPRGVFIVRGENVVL 75
Query: 70 VEALEPVSKSQ 80
+ ++ +++
Sbjct: 76 LGEIDAEKEAE 86
>gi|221482497|gb|EEE20845.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 335
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 4 SGQP---PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND-- 56
SG P L++ +DKKL + L R ++G LR FDQF NLV++ TV+ V N D
Sbjct: 213 SGMPNWITALEEELDKKLLVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLY 272
Query: 57 IGMVVIRGNSVVTVEALE 74
+G +++RG++++ A++
Sbjct: 273 LGCMIVRGDNMILFGAVD 290
>gi|237841501|ref|XP_002370048.1| U6 snRNA-associated Sm-like protein LSm1, putative [Toxoplasma
gondii ME49]
gi|211967712|gb|EEB02908.1| U6 snRNA-associated Sm-like protein LSm1, putative [Toxoplasma
gondii ME49]
Length = 335
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
Query: 4 SGQP---PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND-- 56
SG P L++ +DKKL + L R ++G LR FDQF NLV++ TV+ V N D
Sbjct: 213 SGMPNWITALEEELDKKLLVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLY 272
Query: 57 IGMVVIRGNSVVTVEALE 74
+G +++RG++++ A++
Sbjct: 273 LGCMIVRGDNMILFGAVD 290
>gi|171186416|ref|YP_001795335.1| like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
gi|170935628|gb|ACB40889.1| Like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
Length = 86
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN--GNEKNDIGMVVIRGNSV 67
L K ++K++ +L + GTL +D MNLV+DN E++ G G +VIRG+ V
Sbjct: 17 LTKMLNKEVVARLKGGVAVRGTLTAYDGCMNLVLDNAAELDKAGEPVARYGRIVIRGSQV 76
Query: 68 VTVEALE 74
+ V A+E
Sbjct: 77 IYVSAIE 83
>gi|429966424|gb|ELA48421.1| hypothetical protein VCUG_00030 [Vavraia culicis 'floridensis']
Length = 89
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV------NGNEKNDIGMVVIR 63
KK++ K++I+L R +G L D+F+N+V+++T E G E ++G+ V R
Sbjct: 5 FKKFLKCKVKIELEDRRFFIGNLLAIDEFLNIVLNDTEEHRKYKNKKGYETRNLGLCVFR 64
Query: 64 GNSVVTVEALEPVSKS 79
G+ V+ ++ ++ +K+
Sbjct: 65 GSKVIGIKTVDKTTKN 80
>gi|71030572|ref|XP_764928.1| small nuclear ribonucleoprotein B [Theileria parva strain Muguga]
gi|68351884|gb|EAN32645.1| small nuclear ribonucleoprotein B, putative [Theileria parva]
Length = 155
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN---GNEKN------DIGMV 60
++ ++ +++ L NR VGTL +D++MNLV+ + E G +KN +G V
Sbjct: 8 MQHWLQYNVRVTLKDNRKFVGTLVAYDKYMNLVLSDCEEFRMTLGKDKNRTEVKRTLGFV 67
Query: 61 VIRGNSVVTVEALEPVSKSQ 80
++RG ++V+ A PV+ Q
Sbjct: 68 LLRGENIVSFTAKSPVNVPQ 87
>gi|85001411|ref|XP_955424.1| u6 snrna-associated sm-like protein [Theileria annulata strain
Ankara]
gi|65303570|emb|CAI75948.1| u6 snrna-associated sm-like protein, putative [Theileria
annulata]
Length = 87
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 9/68 (13%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
+L K+++K++ +K + R + G LRG D NLV+D+TVE + EK ++G+
Sbjct: 16 NLNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEFLKDSSDSSKLTGEKRNLGL 75
Query: 60 VVIRGNSV 67
+V RG SV
Sbjct: 76 LVARGTSV 83
>gi|429216595|ref|YP_007174585.1| small nuclear ribonucleoprotein [Caldisphaera lagunensis DSM
15908]
gi|429133124|gb|AFZ70136.1| small nuclear ribonucleoprotein [Caldisphaera lagunensis DSM
15908]
Length = 79
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 37/58 (63%)
Query: 13 YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTV 70
Y++ + +K+ NR + G L +DQ +NL+++ E+ G +G+V++RG++V+ V
Sbjct: 18 YLNSSVLVKMKGNREVKGILTSYDQHLNLILEKAEELEGKVSRPLGLVLLRGDNVIAV 75
>gi|327272990|ref|XP_003221266.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 67
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSV 67
++V
Sbjct: 65 DNV 67
>gi|293355277|ref|XP_001074288.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Rattus
norvegicus]
gi|392334395|ref|XP_003753162.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Rattus
norvegicus]
Length = 108
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK +++K G +GFD +NLV+D T+E + + +G+
Sbjct: 19 DLPKYIDKTIRVKFQGGWEASGISKGFDSLLNLVLDGTIEYRRDPDDQHKLTEDARQLGL 78
Query: 60 VVIRGNSVVTV 70
+V G SVV +
Sbjct: 79 IVCPGTSVVLI 89
>gi|221129197|ref|XP_002167435.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Hydra
magnipapillata]
Length = 140
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DK+L + L R ++G LR DQF N+V++NT+E GN+ DI G+ ++RG+++V
Sbjct: 19 LDKRLLVVLRDGRTLIGELRSVDQFANVVLENTIERIHVGNKYGDISRGVFIVRGDNIVL 78
Query: 70 VEALEPVSK 78
+ ++ + +
Sbjct: 79 LGEMDALKE 87
>gi|403416516|emb|CCM03216.1| predicted protein [Fibroporia radiculosa]
Length = 110
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 24/93 (25%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------------- 52
DL KY ++++++K R + G L+GFDQ +NLV+D E N
Sbjct: 11 DLSKYANERIRVKFTGGREVTGILKGFDQLLNLVLDEVEEQFQNGEDSKFTIGLISSTNF 70
Query: 53 -----EKNDIGMVVIRGNSVVTVEALEPVSKSQ 80
+ +G+VV+RG T+ L PV S+
Sbjct: 71 AEAQLQTRSLGLVVLRGP---TITLLSPVDGSE 100
>gi|452824963|gb|EME31962.1| U6 snRNA-associated Sm-like protein LSm8 [Galdieria sulphuraria]
Length = 95
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGN----EKNDIGMVVIRG 64
L Y+DK + + N R+++G L+GFDQ N+++++TVE + G ++ +G+ V+RG
Sbjct: 4 LSSYVDKTVSVVTNDGRILIGILKGFDQSCNVILESTVERIFGTDVAMQEVAVGLYVLRG 63
Query: 65 NSVVTVEALEPVSKSQ 80
+ + + L+ +S+
Sbjct: 64 DDIAILGELDAEKESE 79
>gi|148699537|gb|EDL31484.1| mCG12127, isoform CRA_e [Mus musculus]
Length = 78
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI 57
DL KY+DK +++K R G L+GFD +NLV+D T+E E ++
Sbjct: 14 DLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRGEPAEV 62
>gi|393232628|gb|EJD40208.1| LSM-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 95
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-----NGNEKNDIGMVVIRG 64
L+ Y+D ++ + L R I+GTLRG+DQ N+V+ +VE +G ++ +G+ +++G
Sbjct: 4 LQGYVDHRVYLVLTDGRSIIGTLRGYDQKSNIVLSESVERIYSADSGVDEAQLGLYLVKG 63
Query: 65 NSVVTVEALE 74
+++ + L+
Sbjct: 64 DTIALIGELD 73
>gi|399216804|emb|CCF73491.1| unnamed protein product [Babesia microti strain RI]
Length = 102
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG---------NEKNDIGM 59
+L KY++K +++K N R + G L+GFD NLV+D E E +G+
Sbjct: 16 NLNKYLNKYIRVKFNGGREVRGLLKGFDVMSNLVLDEAEEFKCESESFYSFDEESRPLGL 75
Query: 60 VVIRGNSVVTV 70
VV RG SV +
Sbjct: 76 VVARGTSVALI 86
>gi|432328294|ref|YP_007246438.1| small nuclear ribonucleoprotein [Aciduliprofundum sp. MAR08-339]
gi|432135003|gb|AGB04272.1| small nuclear ribonucleoprotein [Aciduliprofundum sp. MAR08-339]
Length = 72
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVV 68
L+ +M+K++ + L NR++ G L GFD +MN+V+ +T E +G V++RGN+VV
Sbjct: 8 LENFMNKRISLLLKDNRVLEGKLVGFDDYMNMVLMDTEEKTEEMTRRLGTVILRGNNVV 66
>gi|161527729|ref|YP_001581555.1| like-Sm ribonucleoprotein core [Nitrosopumilus maritimus SCM1]
gi|160339030|gb|ABX12117.1| Like-Sm ribonucleoprotein core [Nitrosopumilus maritimus SCM1]
Length = 78
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG-NEKNDIGMVVIRGNSVV 68
L + +++ + IKL N+ I G L GFDQ MNL++D++ E+ E +G +V+RG++VV
Sbjct: 10 LDESINQIVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEEIPAEGEAKGLGSIVVRGDNVV 69
Query: 69 TV 70
+
Sbjct: 70 MI 71
>gi|406866709|gb|EKD19748.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 95
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 6/52 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEV------NGNEKNDIGMVVIRGNSVVTVEAL 73
I G +RGFD+FMNLVID+ VEV + + D+G ++++G++V +++L
Sbjct: 42 IEGKIRGFDEFMNLVIDDAVEVKQATKTSAESRRDLGQILLKGDNVSLIQSL 93
>gi|402217673|gb|EJT97752.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 135
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
+DKK+ I L R +VG LR +DQF NLV++++ E +G E D+ G+ VIRG +VV
Sbjct: 17 VDKKVLIVLRDGRKLVGVLRSYDQFANLVLEDSYERIFHGLEYADVWKGVFVIRGENVV 75
>gi|149638763|ref|XP_001516404.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ornithorhynchus anatinus]
Length = 96
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ ++++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LENFINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDS 79
>gi|115458610|ref|NP_001052905.1| Os04g0445800 [Oryza sativa Japonica Group]
gi|113564476|dbj|BAF14819.1| Os04g0445800 [Oryza sativa Japonica Group]
gi|218194932|gb|EEC77359.1| hypothetical protein OsI_16058 [Oryza sativa Indica Group]
gi|222628944|gb|EEE61076.1| hypothetical protein OsJ_14946 [Oryza sativa Japonica Group]
Length = 129
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L ++DKKL + L R ++GTL FDQF N+V+ E + G D+ G+ VIRG
Sbjct: 16 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGE 75
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 76 NVVLIGELD 84
>gi|20093660|ref|NP_613507.1| small nuclear ribonucleoprotein (snRNP)-like protein
[Methanopyrus kandleri AV19]
gi|19886535|gb|AAM01437.1| Small nuclear ribonucleoprotein (snRNP) homolog [Methanopyrus
kandleri AV19]
Length = 73
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 6 QPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRG 64
+P D L+ ++D + ++L + + G L FD +NLV+D+ VE++ + + +G V+IRG
Sbjct: 2 RPHDCLRDFLDDIVIVELKTGKTLRGRLVSFDGHLNLVLDDCVEIDEDSEVRLGRVLIRG 61
Query: 65 NSVVTVEALE 74
+SV + E
Sbjct: 62 DSVTLISPAE 71
>gi|225713684|gb|ACO12688.1| U6 snRNA-associated Sm-like protein LSm1 [Lepeophtheirus
salmonis]
Length = 138
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQ+ NLV+ +E GN+ DI G+ V+RG +VV
Sbjct: 16 LDKKLMVLLRDGRTLIGILRPVDQYANLVLHRAIERIHVGNDYGDIPRGIFVVRGENVVL 75
Query: 70 VEALEPVSKSQ 80
+ ++ V +S+
Sbjct: 76 LGEIDEVRESE 86
>gi|125811580|ref|XP_001361929.1| GA18077 [Drosophila pseudoobscura pseudoobscura]
gi|195170162|ref|XP_002025882.1| GL10169 [Drosophila persimilis]
gi|54637105|gb|EAL26508.1| GA18077 [Drosophila pseudoobscura pseudoobscura]
gi|194110746|gb|EDW32789.1| GL10169 [Drosophila persimilis]
Length = 137
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG
Sbjct: 13 LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNQYGDIPRGVFIIRGE 72
Query: 66 SVVTV 70
+VV +
Sbjct: 73 NVVLL 77
>gi|340369040|ref|XP_003383057.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Amphimedon queenslandica]
Length = 97
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
++ Y+++ + I R+IVGTL+GFDQ +N+++ N+ E +G E+ +G+ +IRG
Sbjct: 6 IEPYVNRSVSIITGDGRVIVGTLKGFDQTVNIILSNSHERVYSSSSGVEQVQLGLYIIRG 65
Query: 65 NSVVTVEALE 74
+++ + L+
Sbjct: 66 DNIAVIGELD 75
>gi|357149636|ref|XP_003575180.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Brachypodium distachyon]
Length = 128
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L ++DKKL + L R ++GTL FDQF N+V+ E + G D+ G+ VIRG
Sbjct: 15 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|326500218|dbj|BAK06198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326503284|dbj|BAJ99267.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 128
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L ++DKKL + L R ++GTL FDQF N+V+ E + G D+ G+ VIRG
Sbjct: 15 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|363727561|ref|XP_003640398.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Gallus gallus]
Length = 80
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64
Query: 65 NSV 67
++V
Sbjct: 65 DNV 67
>gi|357163727|ref|XP_003579826.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Brachypodium distachyon]
Length = 128
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L ++DKKL + L R ++GTL FDQF N+V+ E + G D+ G+ VIRG
Sbjct: 15 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGE 74
Query: 66 SVVTVEALE 74
+VV + L+
Sbjct: 75 NVVLIGELD 83
>gi|146096397|ref|XP_001467793.1| putative small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
gi|157873845|ref|XP_001685423.1| putative small nuclear ribonucleoprotein [Leishmania major strain
Friedlin]
gi|398020732|ref|XP_003863529.1| small nuclear ribonucleoprotein, putative [Leishmania donovani]
gi|68128495|emb|CAJ08627.1| putative small nuclear ribonucleoprotein [Leishmania major strain
Friedlin]
gi|134072159|emb|CAM70860.1| putative small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
gi|322501762|emb|CBZ36844.1| small nuclear ribonucleoprotein, putative [Leishmania donovani]
Length = 81
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE------VNGNEKNDIGMVV 61
P+L +M+K++ +K+ R I G LRG D+ M++V+ + ++ V+ + +G V
Sbjct: 8 PNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRNAAVSEEARLALGTTV 67
Query: 62 IRGNSVVTV 70
IRG+++V +
Sbjct: 68 IRGSAIVEI 76
>gi|303310042|ref|XP_003065034.1| Small nuclear ribonucleoprotein E , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240104693|gb|EER22889.1| Small nuclear ribonucleoprotein E , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320033257|gb|EFW15206.1| hypothetical protein CPSG_08394 [Coccidioides posadasii str.
Silveira]
gi|392867032|gb|EAS29780.2| LSM domain-containing protein [Coccidioides immitis RS]
Length = 94
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEV------NGNEKNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLVID+ VEV ++ +G ++++G++V ++AL+
Sbjct: 42 IEGKIRGFDEFMNLVIDDAVEVRVPTKDQEEQRRQLGQILLKGDNVSLIQALQ 94
>gi|38344547|emb|CAD40963.2| OSJNBa0027P08.15 [Oryza sativa Japonica Group]
gi|116310232|emb|CAH67241.1| OSIGBa0140O07.9 [Oryza sativa Indica Group]
Length = 136
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L ++DKKL + L R ++GTL FDQF N+V+ E + G D+ G+ VIRG
Sbjct: 16 LAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGE 75
Query: 66 SVVTV 70
+VV +
Sbjct: 76 NVVLI 80
>gi|219852145|ref|YP_002466577.1| Sm ribonucleoprotein-like protein [Methanosphaerula palustris
E1-9c]
gi|219546404|gb|ACL16854.1| Like-Sm ribonucleoprotein core [Methanosphaerula palustris E1-9c]
Length = 77
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 14 MDKKLQIKL-NANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTV 70
+D K+ +++ + R++ G L D+++N+ +D T+E+N +K ++G VVIRGN+++T+
Sbjct: 16 VDSKISVEIKDEGRILEGRLVAVDEYLNIHMDETIELNAAQKRNLGTVVIRGNNILTI 73
>gi|260791583|ref|XP_002590808.1| hypothetical protein BRAFLDRAFT_125735 [Branchiostoma floridae]
gi|229276005|gb|EEN46819.1| hypothetical protein BRAFLDRAFT_125735 [Branchiostoma floridae]
Length = 81
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 1 MSRSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIG 58
MSR P D LK+ + + + +KLN+ G L D +MN+ ++ T E VNG KN G
Sbjct: 1 MSRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYG 60
Query: 59 MVVIRGNSVVTVEALEPVSKS 79
IRGN+V+ + + V ++
Sbjct: 61 DAFIRGNNVLYISTQKAVRRA 81
>gi|70986850|ref|XP_748912.1| small nuclear ribonucleoprotein SmE [Aspergillus fumigatus Af293]
gi|66846542|gb|EAL86874.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus
fumigatus Af293]
gi|159123319|gb|EDP48439.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus
fumigatus A1163]
Length = 95
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND------IGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLVID+ VEV K D +G ++++G++V ++A++
Sbjct: 43 IEGKIRGFDEFMNLVIDDAVEVKMATKTDEEKRRPLGQILLKGDNVSLIQAVQ 95
>gi|301610947|ref|XP_002935003.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like, partial [Xenopus (Silurana) tropicalis]
Length = 89
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 13 YMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRGNSV 67
Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ ++RG++V
Sbjct: 1 YLNRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 60
Query: 68 VTVEALEPVSKS 79
+ ++ + S
Sbjct: 61 AVIGEIDEETDS 72
>gi|195382173|ref|XP_002049805.1| GJ21790 [Drosophila virilis]
gi|194144602|gb|EDW60998.1| GJ21790 [Drosophila virilis]
Length = 137
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG
Sbjct: 13 LLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNQYGDIPRGVFIIRGE 72
Query: 66 SVVTV 70
+VV +
Sbjct: 73 NVVLL 77
>gi|119483034|ref|XP_001261545.1| LSM domain protein [Neosartorya fischeri NRRL 181]
gi|119409700|gb|EAW19648.1| LSM domain protein [Neosartorya fischeri NRRL 181]
Length = 95
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND------IGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLVID+ VEV K D +G ++++G++V ++A++
Sbjct: 43 IEGKIRGFDEFMNLVIDDAVEVRMATKTDEEKRRPLGQILLKGDNVSLIQAVQ 95
>gi|66814660|ref|XP_641509.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74856091|sp|Q54W83.1|LSM1_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm1
gi|60469541|gb|EAL67532.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 129
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%), Gaps = 4/71 (5%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND--IGMVVIRGNSVVT 69
+DKKL + L R +G +R FDQF N+V+ +T+E G+ +D +G+ IRG++VV
Sbjct: 9 VDKKLIVVLRDGRKFIGIMRTFDQFANIVLQDTIERIYVGDCYSDKNLGLFFIRGDNVVI 68
Query: 70 VEALEPVSKSQ 80
+ ++P + Q
Sbjct: 69 LGEIDPDKEVQ 79
>gi|295667135|ref|XP_002794117.1| hypothetical protein PAAG_03710 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286223|gb|EEH41789.1| hypothetical protein PAAG_03710 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 155
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEV------NGNEKNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLV+D+ VEV +K +G ++++G++V ++AL+
Sbjct: 103 IEGKIRGFDEFMNLVVDDAVEVRLATKTEEEKKRQLGQILLKGDNVSLIQALQ 155
>gi|425766459|gb|EKV05069.1| Small nuclear ribonucleoprotein SmE, putative [Penicillium
digitatum PHI26]
gi|425781600|gb|EKV19555.1| Small nuclear ribonucleoprotein SmE, putative [Penicillium
digitatum Pd1]
Length = 87
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 6/52 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND------IGMVVIRGNSVVTVEAL 73
I GT+RGFD+FMNLVI+N VEV K + +G ++++G++V ++A+
Sbjct: 36 IEGTIRGFDEFMNLVIENAVEVRLATKTEEEKRRPLGQILLKGDNVSLIQAM 87
>gi|15920992|ref|NP_376661.1| small nuclear ribonucleoprotein [Sulfolobus tokodaii str. 7]
gi|342306290|dbj|BAK54379.1| archaeal Sm protein [Sulfolobus tokodaii str. 7]
Length = 79
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVV 68
L + + + +KL ++++ GTL+ +D MNLV++N+ EV + +G ++IRG++V+
Sbjct: 13 LAESLGSTVLVKLKGDKIVRGTLKSYDMHMNLVLENSEEVMSDGSTRKVGTIIIRGDNVI 72
Query: 69 TVEALEP 75
V + P
Sbjct: 73 LVSPMSP 79
>gi|336272660|ref|XP_003351086.1| hypothetical protein SMAC_05965 [Sordaria macrospora k-hell]
Length = 189
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVV- 68
+ Y++ ++++ LN R + G + FD+ MNLV+ + E EK +G+ +IRG ++
Sbjct: 10 MAGYINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADAEEFR-QEKRTLGLTIIRGAHIIS 68
Query: 69 -TVEALEPVSKS 79
+VE+ P S
Sbjct: 69 LSVESPPPADPS 80
>gi|397641777|gb|EJK74845.1| hypothetical protein THAOC_03454 [Thalassiosira oceanica]
Length = 1567
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 4 SGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG------------ 51
SG+ L +Y++ +L+I L R IVGT FD+ +NLV+ + E
Sbjct: 1259 SGKGSKLLRYVEHRLRISLADGRTIVGTFLAFDKHLNLVLVDAEEFRTLKSSRAAILEER 1318
Query: 52 NEKNDIGMVVIRGNSVVTVEALEP 75
EK +G++++RG +VV++ P
Sbjct: 1319 VEKRSLGLIILRGENVVSMAVEGP 1342
>gi|326427782|gb|EGD73352.1| LSM domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 77
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 4 SGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVV 61
S +P D LKK +K+ +KLN+ G L D FMN+ +++T E VNG + G
Sbjct: 2 SDKPSDFLKKIHRQKVVVKLNSGITFTGRLAALDAFMNVALEDTEEYVNGKQTAKYGDAF 61
Query: 62 IRGNSVVTVEALE 74
+RGN+V+ + E
Sbjct: 62 VRGNNVLYISPAE 74
>gi|443898710|dbj|GAC76044.1| UDP-glucose pyrophosphorylase [Pseudozyma antarctica T-34]
Length = 148
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
+DKK+ + L + ++G LR +DQF NLV+ +TVE GN DI G+ ++RG +VV
Sbjct: 22 VDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIARGVFLVRGENVV 80
>gi|407464058|ref|YP_006774940.1| like-Sm ribonucleoprotein core [Candidatus Nitrosopumilus sp.
AR2]
gi|407047246|gb|AFS81998.1| like-Sm ribonucleoprotein core [Candidatus Nitrosopumilus sp.
AR2]
Length = 78
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGNSV 67
L + +++ + IKL N+ I G L GFDQ MNL++D++ E+ G+ K+ +G +V+RG++V
Sbjct: 10 LDESINQVVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEEIPAEGDSKS-LGSIVVRGDNV 68
Query: 68 VTV 70
V +
Sbjct: 69 VMI 71
>gi|224164763|ref|XP_002189792.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Taeniopygia guttata]
Length = 96
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL++D + E G E+ +G+ + RG
Sbjct: 5 LETYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIERG 64
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDS 79
>gi|386002644|ref|YP_005920943.1| Small nuclear ribonucleoprotein, LSM family [Methanosaeta
harundinacea 6Ac]
gi|357210700|gb|AET65320.1| Small nuclear ribonucleoprotein, LSM family [Methanosaeta
harundinacea 6Ac]
Length = 72
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 4 SGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVV 61
S +P D L + ++ + +KL R G L+G+D MNLV+DNT E+ G + +G VV
Sbjct: 2 SQRPLDILNESLNGPVIVKLKDGRAFRGELQGYDIHMNLVLDNTEEIREGEDSKKLGTVV 61
Query: 62 IRGNSVVTV 70
+RG++VV +
Sbjct: 62 VRGDNVVYI 70
>gi|315425372|dbj|BAJ47038.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426552|dbj|BAJ48182.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426610|dbj|BAJ48238.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|343485302|dbj|BAJ50956.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
Length = 74
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNSVV 68
L K + + ++L +++ G L+G+DQ MN+V+++T E ++ N +N +G +V+RG+S+V
Sbjct: 10 LSKSVGSTVLVRLRNGKVLRGLLKGYDQHMNIVLEDTDELIDENTQNKLGTIVVRGDSIV 69
Query: 69 TVE 71
+
Sbjct: 70 MIS 72
>gi|384487006|gb|EIE79186.1| hypothetical protein RO3G_03891 [Rhizopus delemar RA 99-880]
Length = 96
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 24/85 (28%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN----------------------- 50
M+KK++++ N R +VGTL G+D +NLV+DNT E
Sbjct: 1 MEKKIRVRFNGGREVVGTLMGYDPLLNLVLDNTTEYQKGLCYLYVKVANLLPSVDLETGY 60
Query: 51 -GNEKNDIGMVVIRGNSVVTVEALE 74
K ++G+ V+RG +++ + +
Sbjct: 61 ITENKRELGLSVLRGTAIILISPFD 85
>gi|343429796|emb|CBQ73368.1| related to LSM1-Sm-like (Lsm) protein [Sporisorium reilianum
SRZ2]
Length = 148
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
+DKK+ + L + ++G LR +DQF NLV+ +TVE GN DI G+ ++RG +VV
Sbjct: 22 VDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIARGVFLVRGENVV 80
>gi|227827656|ref|YP_002829436.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.14.25]
gi|227830352|ref|YP_002832132.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
L.S.2.15]
gi|229579169|ref|YP_002837567.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
Y.G.57.14]
gi|229582076|ref|YP_002840475.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
Y.N.15.51]
gi|229584860|ref|YP_002843362.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.27]
gi|238619824|ref|YP_002914650.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.4]
gi|284997857|ref|YP_003419624.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|385773326|ref|YP_005645892.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
gi|385775964|ref|YP_005648532.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|227456800|gb|ACP35487.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus L.S.2.15]
gi|227459452|gb|ACP38138.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.14.25]
gi|228009883|gb|ACP45645.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.G.57.14]
gi|228012792|gb|ACP48553.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.N.15.51]
gi|228019910|gb|ACP55317.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.27]
gi|238380894|gb|ACR41982.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.4]
gi|284445752|gb|ADB87254.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|323474712|gb|ADX85318.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|323477440|gb|ADX82678.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
Length = 76
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 20 IKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNSVVTVEALE 74
+KL N+ + GTLR +DQ MNLV+ ++ E+ + +G +VIRG++V+ + L+
Sbjct: 19 VKLKGNKEVRGTLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILISPLQ 74
>gi|150865716|ref|XP_001385048.2| hypothetical protein PICST_47366 [Scheffersomyces stipitis CBS
6054]
gi|149386972|gb|ABN67019.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 90
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNE--KNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMN+VID+ VE++ + K ++G ++++G+++ + +L+
Sbjct: 41 IQGKIRGFDEFMNIVIDDAVEISTKDGSKEELGRILLKGDNITLISSLD 89
>gi|147921633|ref|YP_684550.1| small nuclear ribonucleoprotein [Methanocella arvoryzae MRE50]
gi|121685694|sp|Q0W8R9.1|RUXX_UNCMA RecName: Full=Putative snRNP Sm-like protein
gi|110619946|emb|CAJ35224.1| putative small nuclear ribonucleoprotein (snRNP) Sm-like protein
[Methanocella arvoryzae MRE50]
Length = 72
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 4 SGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-DIGMVV 61
S +P D L + ++ + ++L R G L+G+D MNLV+DN E+ NE + +G ++
Sbjct: 2 SQRPLDVLNEALNSPVIVRLKGGREFRGELQGYDMHMNLVLDNAEELKENEASRKLGTII 61
Query: 62 IRGNSVVTV 70
+RG++VV V
Sbjct: 62 VRGDTVVYV 70
>gi|388853835|emb|CCF52556.1| related to LSM1-Sm-like (Lsm) protein [Ustilago hordei]
Length = 148
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
+DKK+ + L + ++G LR +DQF NLV+ +TVE GN DI G+ ++RG +VV
Sbjct: 22 VDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIVRGVFLVRGENVV 80
>gi|256075162|ref|XP_002573889.1| family S9 non-peptidase homologue (S09 family) [Schistosoma
mansoni]
Length = 664
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGM 59
DL KY+DK++++K + R VG L+G D N+VID T E + + ++ +
Sbjct: 577 DLNKYIDKRIRVKFSGGREAVGILKGCDNLQNMVIDCTTEFLRDPDDPHRLTEDTRELAL 636
Query: 60 VVIRGNSVVTV 70
VV RG SV V
Sbjct: 637 VVCRGPSVELV 647
>gi|407461730|ref|YP_006773047.1| like-Sm ribonucleoprotein core [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045352|gb|AFS80105.1| like-Sm ribonucleoprotein core [Candidatus Nitrosopumilus
koreensis AR1]
Length = 78
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGNSV 67
L + +++ + IKL N+ I G L GFDQ MNL++D++ E+ G+ K +G +V+RG++V
Sbjct: 10 LDESINQVVLIKLKGNKTIRGNLLGFDQHMNLLLDSSEEIPAEGDSKG-LGTIVVRGDNV 68
Query: 68 VTV 70
V +
Sbjct: 69 VMI 71
>gi|223995851|ref|XP_002287599.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976715|gb|EED95042.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 113
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 21/92 (22%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----------NGN-- 52
G+ L +Y++ +L++ L+ R I+GT FD+ +NLV+ +T E NG
Sbjct: 1 GKGSKLLRYIEHRLRVSLSDGRTIIGTFLAFDKHLNLVLVDTEEFRTLRSSNSKSNGGAG 60
Query: 53 ---------EKNDIGMVVIRGNSVVTVEALEP 75
EK +G++++RG +VV++ P
Sbjct: 61 RAAIVEERQEKRSLGLIILRGENVVSIAVEGP 92
>gi|291228074|ref|XP_002734007.1| PREDICTED: Lsm1 protein-like [Saccoglossus kowalevskii]
Length = 134
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF NLV+ T+E G E DI G+ V+RG
Sbjct: 10 LIQEIDKKLLVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKEYGDIPRGVFVVRGE 69
Query: 66 SVVTV 70
+VV +
Sbjct: 70 NVVLL 74
>gi|145352933|ref|XP_001420788.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581023|gb|ABO99081.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 126
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DK+L + L I+GTLR FDQF N+V+++ VE + G +DI G+ ++RG
Sbjct: 13 LVENLDKRLLVALRDGSNIIGTLRSFDQFANIVLESAVERIIVGKMFSDIPLGLYIVRGE 72
Query: 66 SVV 68
+VV
Sbjct: 73 NVV 75
>gi|71001662|ref|XP_755512.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus fumigatus
Af293]
gi|66853150|gb|EAL93474.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
fumigatus Af293]
gi|159129580|gb|EDP54694.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
fumigatus A1163]
Length = 177
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 15 DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVTV 70
DKKL + L R ++G LR +DQF NLV+ +T+E GN DI G+ ++RG +V+ +
Sbjct: 58 DKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLL 117
>gi|196009920|ref|XP_002114825.1| hypothetical protein TRIADDRAFT_58702 [Trichoplax adhaerens]
gi|190582887|gb|EDV22959.1| hypothetical protein TRIADDRAFT_58702 [Trichoplax adhaerens]
Length = 137
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL I L R ++G LR DQF NLV+ +T+E G + DI G+ VIRG++V
Sbjct: 18 IDKKLMIVLKDGRTLIGFLRSVDQFANLVLQDTIERIHVGKQYGDIPRGLFVIRGDNVAI 77
Query: 70 V 70
+
Sbjct: 78 L 78
>gi|426370124|ref|XP_004052022.1| PREDICTED: small nuclear ribonucleoprotein G-like [Gorilla
gorilla gorilla]
Length = 85
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 23 NANRMIVGTLRGFDQFMNLVIDNTVEVN-GNEKNDIGMVVIRGNSVVTVEALEPV 76
N R + G L GF FMNL+I+ V++ ++N+I V I GNS++T++ALE V
Sbjct: 31 NGGRCVQGILWGFSHFMNLMINECVKMAISGQQNNIRTVEIGGNSIITLKALEQV 85
>gi|308477573|ref|XP_003101000.1| CRE-LSM-8 protein [Caenorhabditis remanei]
gi|308264344|gb|EFP08297.1| CRE-LSM-8 protein [Caenorhabditis remanei]
Length = 98
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIRG 64
L+ YM++ + + R+IVG L+GFDQ +NLVI++ E + +E + G+ +IRG
Sbjct: 5 LESYMNRMVNVVTGDGRIIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRG 64
Query: 65 NSVVTV 70
+V +
Sbjct: 65 ENVAII 70
>gi|167527011|ref|XP_001747838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773587|gb|EDQ87225.1| predicted protein [Monosiga brevicollis MX1]
Length = 126
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGM 59
+L ++ DK++++K R + G L+G DQ +N+V+D+ E +E +G+
Sbjct: 38 ELDRFTDKRIRVKFAGGREVTGILKGHDQLLNMVLDDAQEYLRDATDPTRLTDETRTLGL 97
Query: 60 VVIRGNSVVTV 70
+V R +S+V +
Sbjct: 98 IVCRSSSIVVI 108
>gi|329765899|ref|ZP_08257464.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795327|ref|ZP_10378691.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329137605|gb|EGG41876.1| like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 78
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDIGMVVIRGNSV 67
L + +++ + IKL + I G L GFDQ MNL++D++ E V GN K+ +G +V+RG++V
Sbjct: 10 LDESINQIVLIKLKGGKTIRGNLLGFDQHMNLLLDSSEEIPVEGNSKS-LGTIVVRGDNV 68
Query: 68 VTV 70
V +
Sbjct: 69 VMI 71
>gi|281210655|gb|EFA84821.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 132
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND--IGMVVIRGNSVVT 69
+DKKL + L + +G +R FDQF N+++ +T+E G++ +D +G+ IRG++VV
Sbjct: 12 VDKKLIVVLRDGKKFIGVMRTFDQFANIILQDTIERIYVGDKYSDKHLGVFFIRGDTVVI 71
Query: 70 VEALEP 75
+ ++P
Sbjct: 72 LGEIDP 77
>gi|170114328|ref|XP_001888361.1| predicted protein [Laccaria bicolor S238N-H82]
gi|189028838|sp|B0DWN3.1|LSM6_LACBS RecName: Full=U6 snRNA-associated Sm-like protein LSm6
gi|164636673|gb|EDR00966.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 99
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 2 SRSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
+ +G P D LK + K++ ++L + G L D +MN+ ++ T E VNG N G
Sbjct: 23 THTGSPTDFLKGVVGKRVIVRLTSGVDYRGLLSCLDGYMNIALEQTEEHVNGVVTNRYGD 82
Query: 60 VVIRGNSVVTVEALEPV 76
IRGN+V+ + A EP+
Sbjct: 83 AFIRGNNVLYISAAEPI 99
>gi|134056432|emb|CAL00599.1| unnamed protein product [Aspergillus niger]
Length = 143
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 15 DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVTV 70
DKKL + L R ++G LR +DQF NLV+ +T+E GN DI G+ ++RG +V+ +
Sbjct: 24 DKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLL 83
>gi|119481233|ref|XP_001260645.1| small nuclear ribonucleoprotein (LSM1), putative [Neosartorya
fischeri NRRL 181]
gi|119408799|gb|EAW18748.1| small nuclear ribonucleoprotein (LSM1), putative [Neosartorya
fischeri NRRL 181]
Length = 177
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 15 DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVTV 70
DKKL + L R ++G LR +DQF NLV+ +T+E GN DI G+ ++RG +V+ +
Sbjct: 58 DKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLL 117
>gi|156553084|ref|XP_001600131.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Nasonia
vitripennis]
Length = 134
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF NLV+ T+E G E DI G+ ++RG
Sbjct: 10 LLEELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIPRGVFIVRGE 69
Query: 66 SVVTV 70
+VV +
Sbjct: 70 NVVLL 74
>gi|71017769|ref|XP_759115.1| hypothetical protein UM02968.1 [Ustilago maydis 521]
gi|46098907|gb|EAK84140.1| hypothetical protein UM02968.1 [Ustilago maydis 521]
Length = 148
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
+DKK+ + L + ++G LR +DQF NLV+ +TVE GN D+ G+ ++RG +VV
Sbjct: 22 VDKKMLVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDVARGIFLVRGENVV 80
>gi|340960769|gb|EGS21950.1| small nuclear ribonucleoprotein E-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 98
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%), Gaps = 7/53 (13%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND-------IGMVVIRGNSVVTVEAL 73
I G +RGFD+FMNLVID+ VE+ + K + +G ++++G+++ ++AL
Sbjct: 42 ITGVIRGFDEFMNLVIDDAVEIKLSPKTNEPESKRPLGQILLKGDNISLIQAL 94
>gi|156405763|ref|XP_001640901.1| predicted protein [Nematostella vectensis]
gi|156228037|gb|EDO48838.1| predicted protein [Nematostella vectensis]
Length = 96
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-----NGNEKNDIGMVVIRG 64
L+ Y++ + + RMIVGTL+GFDQ +N+++D++ E +G E+ +G+ +IRG
Sbjct: 5 LESYVNHTVAVITQDGRMIVGTLKGFDQTVNVILDDSHERVFSSGSGVEQVVLGLYIIRG 64
Query: 65 NSVVTVEALE 74
+++ + ++
Sbjct: 65 DNIAVIGEID 74
>gi|19112516|ref|NP_595724.1| Sm snRNP core protein Sme1 [Schizosaccharomyces pombe 972h-]
gi|74638881|sp|Q9USZ3.1|RUXE_SCHPO RecName: Full=Small nuclear ribonucleoprotein E; Short=snRNP-E;
AltName: Full=Sm protein E; Short=Sm-E; Short=SmE
gi|6165482|emb|CAB59808.1| Sm snRNP core protein Sme1 [Schizosaccharomyces pombe]
Length = 84
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 30 GTLRGFDQFMNLVIDNTVEVNG-NEKNDIGMVVIRGNSVVTVEAL 73
G +RGFD+FMN+V+D+ V+V+ N K ++G ++++G+++ ++A+
Sbjct: 40 GQIRGFDEFMNIVLDDAVQVDAKNNKRELGRILLKGDNITLIQAI 84
>gi|145491875|ref|XP_001431936.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399043|emb|CAK64538.1| unnamed protein product [Paramecium tetraurelia]
Length = 126
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE--------KNDIGMVVIR 63
+++D +++I L RM+VGT FD+ +N+++ E + K +GM+++R
Sbjct: 9 QWIDYRVRITLGDGRMLVGTFLAFDKHLNVILSECEEYRIRKQGIHEIETKRTLGMIIVR 68
Query: 64 GNSVVTVEALEP 75
G++++++ A P
Sbjct: 69 GDNIISLSAEAP 80
>gi|148298867|ref|NP_001091827.1| LSM1-like protein [Bombyx mori]
gi|95102704|gb|ABF51290.1| LSM1-like protein [Bombyx mori]
Length = 138
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQF NLV+ T+E G E DI G+ ++RG +VV
Sbjct: 18 LDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIVRGENVVL 77
Query: 70 V 70
+
Sbjct: 78 L 78
>gi|393247771|gb|EJD55278.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 136
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
+DKK+ + L R +VG LR +DQF NLV+++T+E +G ++ G+ +IRG +VV
Sbjct: 17 VDKKMLVVLRDGRKLVGVLRSYDQFANLVLEDTIERFYHGQNYGEVRRGVFLIRGENVV 75
>gi|340344088|ref|ZP_08667220.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519229|gb|EGP92952.1| Like-Sm ribonucleoprotein core [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 78
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGNSV 67
L + +++ + IKL + I G L GFDQ MNL++D++ E+ GN K+ +G +V+RG++V
Sbjct: 10 LDESINQIVLIKLKGGKTIRGNLLGFDQHMNLLLDSSEEIPTEGNSKS-LGTIVVRGDNV 68
Query: 68 VTV 70
V +
Sbjct: 69 VMI 71
>gi|282164954|ref|YP_003357339.1| putative small nucleolar RNP Sm protein [Methanocella paludicola
SANAE]
gi|282157268|dbj|BAI62356.1| putative small nucleolar RNP Sm protein [Methanocella paludicola
SANAE]
Length = 72
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 4 SGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-DIGMVV 61
S +P D L ++ + ++L R G L+G+D MNLV+DN E+ NE++ +G ++
Sbjct: 2 SQRPLDVLNDALNSPVIVRLKGGREFRGELQGYDMHMNLVLDNAEELKENEESKKLGTII 61
Query: 62 IRGNSVVTV 70
+RG++VV V
Sbjct: 62 VRGDTVVYV 70
>gi|121711637|ref|XP_001273434.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus
clavatus NRRL 1]
gi|119401585|gb|EAW12008.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus
clavatus NRRL 1]
Length = 95
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND------IGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLV+D+ VEV K D +G ++++G++V ++A++
Sbjct: 43 IEGKIRGFDEFMNLVVDDAVEVRMATKTDEEKRRPLGQILLKGDNVSLIQAVQ 95
>gi|428672291|gb|EKX73205.1| small nuclear ribonucleoprotein G, putative [Babesia equi]
Length = 104
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN---------EKNDIGMV 60
L K+++K++ +K + R + GTL+G D NLV+D+T E + E ++G++
Sbjct: 17 LNKHLNKQVYVKFSGGREVQGTLKGHDAMSNLVLDDTKEFLKDPDDPEKLTGETRELGLL 76
Query: 61 VIRGNSVVTVEALEPVSK 78
V RG SV + ++ K
Sbjct: 77 VARGTSVTVIYPIDGTEK 94
>gi|425774010|gb|EKV12333.1| hypothetical protein PDIG_44610 [Penicillium digitatum PHI26]
gi|425782493|gb|EKV20399.1| hypothetical protein PDIP_16600 [Penicillium digitatum Pd1]
Length = 172
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 15/85 (17%)
Query: 1 MSRSGQPPDLKKYM-----------DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE- 48
+ +G PP L M DKKL + L R ++G LR +DQF NLV +TVE
Sbjct: 28 LGPAGGPPQLPPQMFTTAAQLLDLTDKKLVLILRDGRKLIGVLRSWDQFANLVFQDTVER 87
Query: 49 -VNGNEKNDI--GMVVIRGNSVVTV 70
G+ D+ G+ ++RG +V+ +
Sbjct: 88 VYAGHLFADVPRGIFIVRGENVLLL 112
>gi|168017010|ref|XP_001761041.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687727|gb|EDQ74108.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 127
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 1 MSRSGQPPD------LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN 52
MS SG PD L +DKKL + L R ++G LR FDQF N+V++ +E G
Sbjct: 1 MSWSG--PDNFPATSLADNLDKKLLVILRDGRKLIGVLRSFDQFANVVLEGALERITVGE 58
Query: 53 EKND--IGMVVIRGNSVVTVEALE 74
D +G+ +IRG +VV + L+
Sbjct: 59 LYCDLPLGLYIIRGENVVLIGELD 82
>gi|255079102|ref|XP_002503131.1| like-sm protein [Micromonas sp. RCC299]
gi|226518397|gb|ACO64389.1| like-sm protein [Micromonas sp. RCC299]
Length = 127
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKK+ + L I+G LR FDQF N+V++N E + G +DI G+ ++RG
Sbjct: 17 LVEELDKKILVVLRDGSKIIGFLRSFDQFANIVLENACERIIVGTSFSDIPLGLYIVRGE 76
Query: 66 SVV 68
+VV
Sbjct: 77 NVV 79
>gi|198428544|ref|XP_002121997.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8
[Ciona intestinalis]
Length = 96
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ +++ + I RMIVGTL+GFDQ +NL++D + E +G E+ +G+ +IRG
Sbjct: 5 LEPLVNRIVSIVTADGRMIVGTLKGFDQTVNLILDESHERVFSSSHGVEQVMLGLYIIRG 64
Query: 65 NSVVTV 70
++V V
Sbjct: 65 DNVAVV 70
>gi|170083973|ref|XP_001873210.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650762|gb|EDR15002.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 136
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN--EKNDIGMVVIRGNSVVT 69
+D+K+ + L R + G LR +DQF NLV+++TVE +GN +N G+ +IRG +VV
Sbjct: 17 VDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAENWHGLFLIRGENVVL 76
Query: 70 V 70
+
Sbjct: 77 L 77
>gi|443895494|dbj|GAC72840.1| small nuclear ribonucleoprotein F [Pseudozyma antarctica T-34]
Length = 90
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 2 SRSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
S++G P D LK + K + ++LN+ G L D +MN+ ++NT E V+G +KN+ G
Sbjct: 7 SKAGSPNDFLKGVIGKSVNVRLNSGIDYQGVLSCLDGYMNIALENTTEYVDGVKKNNYGD 66
Query: 60 VVIRGNSVVTVEAL-EPVSKSQ 80
IRGN+ + L +P ++
Sbjct: 67 AFIRGNNGTFSKQLGDPACRNH 88
>gi|341882643|gb|EGT38578.1| hypothetical protein CAEBREN_11633 [Caenorhabditis brenneri]
gi|341899974|gb|EGT55909.1| hypothetical protein CAEBREN_04439 [Caenorhabditis brenneri]
Length = 98
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIRG 64
L+ YM++ + + R+IVG L+GFDQ +NLVI++ E + +E + G+ +IRG
Sbjct: 5 LESYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRG 64
Query: 65 NSVVTV 70
+V +
Sbjct: 65 ENVAII 70
>gi|145499845|ref|XP_001435907.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403043|emb|CAK68510.1| unnamed protein product [Paramecium tetraurelia]
Length = 138
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE--------KNDIGMVVIR 63
+++D +++I L RM+VGT FD+ +N+++ E + K +GM+++R
Sbjct: 9 QWIDYRVRITLGDGRMLVGTFLAFDKHLNVILSECEEYRIRKQGIHEIETKRTLGMIIVR 68
Query: 64 GNSVVTVEALEP 75
G++++++ A P
Sbjct: 69 GDNIISLSAEAP 80
>gi|225679918|gb|EEH18202.1| hypothetical protein PABG_00765 [Paracoccidioides brasiliensis
Pb03]
gi|226291688|gb|EEH47116.1| hypothetical protein PADG_03214 [Paracoccidioides brasiliensis
Pb18]
Length = 94
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEV------NGNEKNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLV+D+ VEV K +G ++++G++V ++AL+
Sbjct: 42 IEGKIRGFDEFMNLVVDDAVEVRLATKTEEERKRQLGQILLKGDNVSLIQALQ 94
>gi|345567352|gb|EGX50284.1| hypothetical protein AOL_s00076g48 [Arthrobotrys oligospora ATCC
24927]
Length = 86
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 18 LQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNSVVTVEA 72
+ +KLN+ G L+ D +MN+ ++NT E VNG KN G V IRGN+V+ + A
Sbjct: 29 ITVKLNSGVEYKGELQSVDGYMNIALENTEEYVNGERKNRYGDVFIRGNNVLYISA 84
>gi|242810005|ref|XP_002485492.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
stipitatus ATCC 10500]
gi|218716117|gb|EED15539.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
stipitatus ATCC 10500]
Length = 166
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 15 DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN--EKNDIGMVVIRGNSVVTV 70
DKKL + L R ++G LR +DQF NLV+ +TVE GN + +G+ ++RG +V+ +
Sbjct: 47 DKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTVERIYAGNLYAEEHVGLYLVRGENVLLL 106
>gi|344299952|gb|EGW30292.1| hypothetical protein SPAPADRAFT_63138 [Spathaspora passalidarum
NRRL Y-27907]
Length = 87
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVN--GNEKNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMN+VID+ VE++ K+++G ++++G+++ + +L+
Sbjct: 38 IQGKIRGFDEFMNIVIDDAVEISTVTGRKDELGRILLKGDNITLISSLD 86
>gi|169620926|ref|XP_001803874.1| hypothetical protein SNOG_13667 [Phaeosphaeria nodorum SN15]
gi|111057994|gb|EAT79114.1| hypothetical protein SNOG_13667 [Phaeosphaeria nodorum SN15]
Length = 97
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 8/55 (14%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEV--------NGNEKNDIGMVVIRGNSVVTVEALE 74
I G LRGFD+FMNLVID+ VEV E+ IG ++++G+++ ++ L+
Sbjct: 43 IEGKLRGFDEFMNLVIDDAVEVTLANAKKETPEERRSIGQILLKGDNISLIQQLQ 97
>gi|317026774|ref|XP_001399521.2| small nuclear ribonucleoprotein (LSM1) [Aspergillus niger CBS
513.88]
gi|350634459|gb|EHA22821.1| hypothetical protein ASPNIDRAFT_174735 [Aspergillus niger ATCC
1015]
gi|358365679|dbj|GAA82301.1| small nuclear ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 174
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 15 DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVTV 70
DKKL + L R ++G LR +DQF NLV+ +T+E GN DI G+ ++RG +V+ +
Sbjct: 55 DKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLL 114
>gi|115465821|ref|NP_001056510.1| Os05g0594900 [Oryza sativa Japonica Group]
gi|55733874|gb|AAV59381.1| unknown protein [Oryza sativa Japonica Group]
gi|113580061|dbj|BAF18424.1| Os05g0594900 [Oryza sativa Japonica Group]
Length = 99
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 7/75 (9%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKN 55
M+ +G P L+ +D+ + + N R IVGTLRGFDQ N+++D + E G ++
Sbjct: 1 MASAG--PGLESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTREGVQQL 58
Query: 56 DIGMVVIRGNSVVTV 70
+G+ +IRG+++ V
Sbjct: 59 VLGLYIIRGDNISVV 73
>gi|322786976|gb|EFZ13200.1| hypothetical protein SINV_03814 [Solenopsis invicta]
Length = 116
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 21/83 (25%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----------VNGNEKND- 56
DL KY++K +++K R G L+G+D +NLV+DNT E N + +D
Sbjct: 17 DLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNTKEYLRGVRYLNNFFNYIDPDDP 76
Query: 57 ---------IGMVVIRGNSVVTV 70
+G+VV RG SVV +
Sbjct: 77 YKLNQDTRMLGLVVCRGTSVVLI 99
>gi|443703278|gb|ELU00915.1| hypothetical protein CAPTEDRAFT_152822 [Capitella teleta]
Length = 79
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 1 MSRSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIG 58
MSR P D LK+ + + + +KLN+ G L D +MN+ +++T E VNG KN G
Sbjct: 1 MSRKQTPSDFLKQIIGRTVVVKLNSGVDYRGVLACLDGYMNIALEHTEEYVNGQLKNKYG 60
Query: 59 MVVIRGNSVVTVEA 72
IRGN+V+ +
Sbjct: 61 DAFIRGNNVLYIST 74
>gi|357132320|ref|XP_003567778.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Brachypodium distachyon]
Length = 99
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKN 55
M+ +G P L+ +D+ + + N R IVGTLRGFDQ N+++D + E G ++
Sbjct: 1 MASAG--PTLESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQL 58
Query: 56 DIGMVVIRGNSV 67
+G+ +IRG+++
Sbjct: 59 VLGLYIIRGDNI 70
>gi|357609556|gb|EHJ66513.1| LSM1-like protein [Danaus plexippus]
Length = 138
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQF NLV+ T+E G E DI G+ ++RG +VV
Sbjct: 18 LDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGREYGDIPRGIFIVRGENVVL 77
Query: 70 V 70
+
Sbjct: 78 L 78
>gi|213408613|ref|XP_002175077.1| U6 snRNP-associated protein Lsm6 [Schizosaccharomyces japonicus
yFS275]
gi|212003124|gb|EEB08784.1| U6 snRNP-associated protein Lsm6 [Schizosaccharomyces japonicus
yFS275]
Length = 75
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNSVV 68
L K + K + I+LN+ G L D +MNL ++NT E VNG + N+ G IRGN+V+
Sbjct: 9 LNKVIGKPVFIRLNSGVDYKGILSCLDGYMNLALENTEEYVNGKKTNEYGDAFIRGNNVL 68
Query: 69 TVEAL 73
V A+
Sbjct: 69 YVSAI 73
>gi|156391102|ref|XP_001635608.1| predicted protein [Nematostella vectensis]
gi|156222703|gb|EDO43545.1| predicted protein [Nematostella vectensis]
Length = 138
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L K +DKKL + L R ++G LR DQF NLV+ T+E G+ DI G+ ++RG
Sbjct: 10 LIKEIDKKLLVLLRDGRTLIGYLRSIDQFANLVLQETIERIYVGDRYGDIPRGIFLVRGE 69
Query: 66 SVVTV 70
++V +
Sbjct: 70 NLVLL 74
>gi|449297252|gb|EMC93270.1| hypothetical protein BAUCODRAFT_76081 [Baudoinia compniacensis
UAMH 10762]
Length = 97
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 9/55 (16%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNG---------NEKNDIGMVVIRGNSVVTVEAL 73
I G +RGFD+FMNLVID VEV N + ++G ++++G++V +++L
Sbjct: 42 IEGKIRGFDEFMNLVIDEAVEVKQPTKADPEPENPRRELGQILLKGDNVCLIQSL 96
>gi|399949677|gb|AFP65335.1| putative small nuclear ribonucleoprotein G [Chroomonas
mesostigmatica CCMP1168]
Length = 75
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVT 69
+K + KK+ I + + + G L GFDQFMNL + N N +K IG ++RG+ V++
Sbjct: 10 IKSLIGKKVYIYIQSRIKLEGILCGFDQFMNLSVKNLRLFNKKKKKKIGTSLVRGHLVIS 69
Query: 70 VEALEP 75
+EA E
Sbjct: 70 IEASES 75
>gi|302695391|ref|XP_003037374.1| hypothetical protein SCHCODRAFT_64638 [Schizophyllum commune
H4-8]
gi|300111071|gb|EFJ02472.1| hypothetical protein SCHCODRAFT_64638 [Schizophyllum commune
H4-8]
Length = 136
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKNDIGMVVIRGNSVV 68
+D+K+ + L R +VG LR +DQF NLV+++T E N + +G+ +IRG +VV
Sbjct: 17 VDRKMLVVLRDGRKLVGVLRSYDQFANLVLEDTWEKIYHSNLWAEKHVGLFLIRGENVV 75
>gi|242016169|ref|XP_002428708.1| lsm1, putative [Pediculus humanus corporis]
gi|212513379|gb|EEB15970.1| lsm1, putative [Pediculus humanus corporis]
Length = 96
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y++ + I + R VGTLRGFDQ +NL++D + E G E+ +G+ +IRG
Sbjct: 5 LESYVNHTVSIITSDGRNFVGTLRGFDQTINLILDESHERVYSQTQGIEQVVLGLHIIRG 64
Query: 65 NSVVTV 70
++V +
Sbjct: 65 DNVAVI 70
>gi|212537161|ref|XP_002148736.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
marneffei ATCC 18224]
gi|210068478|gb|EEA22569.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
marneffei ATCC 18224]
Length = 169
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Query: 15 DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN--EKNDIGMVVIRGNSVV 68
DKKL + L R ++G LR +DQF NLV+ +TVE GN + +G+ ++RG +V+
Sbjct: 50 DKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTVERIYAGNLYAEEHVGLYLVRGENVL 107
>gi|401397747|ref|XP_003880128.1| hypothetical protein NCLIV_005690 [Neospora caninum Liverpool]
gi|325114537|emb|CBZ50093.1| hypothetical protein NCLIV_005690 [Neospora caninum Liverpool]
Length = 174
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNEKNDIGMVVIRGN 65
L++ +DKKL + L R ++G LR FDQF N+V++ TV+ N +G +++RG+
Sbjct: 61 LEEELDKKLLVVLRDGRKLIGYLRTFDQFGNIVLEGTVQRLLVDNAYADLYVGCMIVRGD 120
Query: 66 SVVTVEALE 74
+++ A++
Sbjct: 121 NMILFGAVD 129
>gi|115399850|ref|XP_001215514.1| small nuclear ribonucleoprotein E [Aspergillus terreus NIH2624]
gi|114191180|gb|EAU32880.1| small nuclear ribonucleoprotein E [Aspergillus terreus NIH2624]
Length = 94
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND------IGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLV+D+ VEV K D +G ++++G++V ++A++
Sbjct: 42 IEGKIRGFDEFMNLVVDDAVEVRMATKTDEEKRRPLGQILLKGDNVSLIQAVQ 94
>gi|328771114|gb|EGF81154.1| hypothetical protein BATDEDRAFT_7306, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 104
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---------VNGNEKNDIGM 59
DL KY +KK+ ++ R + G L+G+D NLV+D+ E V E IG+
Sbjct: 17 DLTKYSNKKIIVQFQGGRQVAGILKGYDPLSNLVLDDAEEFIRDSSDPSVLTGETRKIGL 76
Query: 60 VVIRGNSVVTVEALEPVSKSQ 80
VV R +V + + +++
Sbjct: 77 VVTRAPPMVLISPFDGTEETE 97
>gi|389609539|dbj|BAM18381.1| Sm protein G, putative [Papilio xuthus]
Length = 138
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQF NLV+ T+E G E DI G+ ++RG +VV
Sbjct: 18 LDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIVRGENVVL 77
Query: 70 V 70
+
Sbjct: 78 L 78
>gi|50309253|ref|XP_454633.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643768|emb|CAG99720.1| KLLA0E15159p [Kluyveromyces lactis]
Length = 179
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---VNGNEKN---DIGMVVIRGNSV 67
+D+K+ + L RM G LR FDQ+ NL++ +TVE + G K D G+ +IRG +V
Sbjct: 57 VDRKIFVLLRDGRMFFGVLRTFDQYANLILQHTVERIYIEGENKYGECDRGVFMIRGENV 116
Query: 68 V 68
V
Sbjct: 117 V 117
>gi|255946201|ref|XP_002563868.1| Pc20g13900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588603|emb|CAP86719.1| Pc20g13900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 177
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 4 SGQPPDLKKYM-----------DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VN 50
+G PP L M DKKL + L R ++G LR +DQF NLV +TVE
Sbjct: 36 TGGPPQLPPQMFTTAAQLLDLTDKKLVLILRDGRKLIGVLRSWDQFANLVFQDTVERVYA 95
Query: 51 GNEKNDI--GMVVIRGNSVV 68
G D+ G+ ++RG +V+
Sbjct: 96 GQLYADVPRGIFIVRGENVL 115
>gi|115383876|ref|XP_001208485.1| hypothetical protein ATEG_01120 [Aspergillus terreus NIH2624]
gi|114196177|gb|EAU37877.1| hypothetical protein ATEG_01120 [Aspergillus terreus NIH2624]
Length = 171
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 15 DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVTV 70
DKKL + L R ++G LR +DQF NLV+ +T+E GN DI G+ ++RG +V+ +
Sbjct: 52 DKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERMYAGNLYADIPRGIFLVRGENVLLL 111
>gi|430813791|emb|CCJ28894.1| unnamed protein product [Pneumocystis jirovecii]
Length = 92
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKN---DIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLVID VE+ G +KN +G ++++G+++ ++A +
Sbjct: 43 IEGKIRGFDEFMNLVIDEAVEI-GQKKNSSRSLGRILLKGDNITLIQAAQ 91
>gi|392586650|gb|EIW75986.1| LSM-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 98
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 5 GQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVI 62
G P D LK + K++ ++L + G L D +MN+ ++ T E VNG+ N G I
Sbjct: 25 GSPTDFLKGVVGKRVIVRLTSGVDYRGILSCLDGYMNIALEQTEEHVNGSVTNRYGDAFI 84
Query: 63 RGNSVVTVEALEPV 76
RGN+V+ + A EP+
Sbjct: 85 RGNNVLYISAAEPL 98
>gi|357631258|gb|EHJ78848.1| hypothetical protein KGM_10301 [Danaus plexippus]
Length = 463
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 6 QPPDLK-KYMDKKLQIKL----NANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN--DIG 58
QP +L +Y+ + ++++ N N I G + GFD++MN+V+D EV+ KN IG
Sbjct: 15 QPINLIFRYLQNRSRVQIWLYENVNLRIEGHIVGFDEYMNIVLDEAEEVHMKTKNRKQIG 74
Query: 59 MVVIRGNSVVTVEALEP 75
++++G+++ ++ + P
Sbjct: 75 RIMMKGDNITLIQNVNP 91
>gi|5870130|gb|AAD54489.1| small nuclear ribonucleoprotein B' [Homo sapiens]
Length = 243
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 13/89 (14%)
Query: 5 GQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVI-----------DNTVEVNGNE 53
G+ + +++D +++ L R+ +GT + FD+ MNL++ N+ + E
Sbjct: 4 GKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREE 63
Query: 54 KNDIGMVVIRGNSVV--TVEALEPVSKSQ 80
K +G+V++RG ++V TVE P SQ
Sbjct: 64 KRVLGLVLLRGENLVSMTVEGPPPKDVSQ 92
>gi|268536916|ref|XP_002633593.1| C. briggsae CBR-LSM-8 protein [Caenorhabditis briggsae]
Length = 98
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIRG 64
L+ YM++ + + R+IVG L+GFDQ +NLVI++ E +E + + G+ +IRG
Sbjct: 5 LESYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHERCYSETDGVLITPLGLYIIRG 64
Query: 65 NSVVTV 70
+V +
Sbjct: 65 ENVAII 70
>gi|330842218|ref|XP_003293079.1| hypothetical protein DICPUDRAFT_157882 [Dictyostelium purpureum]
gi|325076610|gb|EGC30382.1| hypothetical protein DICPUDRAFT_157882 [Dictyostelium purpureum]
Length = 131
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND--IGMVVIRGNSVVT 69
+DKKL + L R +G +R FDQF N+V+ +T+E G+ +D +G+ IRG++VV
Sbjct: 11 VDKKLIVVLRDGRKFIGMMRTFDQFANIVLQDTIERIYVGDCYSDKNLGVFFIRGDNVVI 70
Query: 70 VEALEP 75
+ ++P
Sbjct: 71 LGEIDP 76
>gi|392578215|gb|EIW71343.1| hypothetical protein TREMEDRAFT_60273 [Tremella mesenterica DSM
1558]
Length = 135
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE----KND 56
+ SG DL +DKK+ + L R I+G R +DQF N ++++ VE ++ D
Sbjct: 7 FTTSGSLVDL---VDKKVLVILRDGRKIIGVFRSYDQFANFLMESVVERLYHKMEYADRD 63
Query: 57 IGMVVIRGNSVVTVEALEPVSK 78
IG++++RG +VV V ++ +++
Sbjct: 64 IGILLVRGENVVAVGEIDLIAE 85
>gi|126644035|ref|XP_001388176.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117253|gb|EAZ51353.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
Length = 139
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNE----KNDIGMVV 61
++KY++ ++++ + +R++VG L FD+ MNLV+ + E G E K +G+++
Sbjct: 1 MQKYINYRIRVTVQDDRVMVGNLMAFDRHMNLVLSDCQEYRRVKKGEESKELKRSLGLIM 60
Query: 62 IRGNSVVTVEALEP 75
+RG ++VT A P
Sbjct: 61 LRGENIVTFVAEAP 74
>gi|443727637|gb|ELU14316.1| hypothetical protein CAPTEDRAFT_142894, partial [Capitella
teleta]
Length = 56
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE 48
DL KY+DK +++K + R G L+GFD +NLV+D E
Sbjct: 12 DLSKYLDKPVRVKFSGGREACGILKGFDPLLNLVLDGCTE 51
>gi|383861132|ref|XP_003706040.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Megachile rotundata]
Length = 134
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF N+V+ T+E G E DI G+ ++RG
Sbjct: 10 LLEELDKKLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGE 69
Query: 66 SVVTV 70
+VV +
Sbjct: 70 NVVLL 74
>gi|307212313|gb|EFN88119.1| U6 snRNA-associated Sm-like protein LSm1 [Harpegnathos saltator]
Length = 134
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQF N+V+ T+E G E DI G+ ++RG +VV
Sbjct: 14 LDKKLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGENVVL 73
Query: 70 V 70
+
Sbjct: 74 L 74
>gi|66823569|ref|XP_645139.1| hypothetical protein DDB_G0272320 [Dictyostelium discoideum AX4]
gi|74857874|sp|Q55A45.1|RSMB_DICDI RecName: Full=Small nuclear ribonucleoprotein-associated protein
B; Short=snRNP-B; AltName: Full=Sm protein B;
Short=Sm-B; Short=SmB
gi|60473366|gb|EAL71312.1| hypothetical protein DDB_G0272320 [Dictyostelium discoideum AX4]
Length = 274
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
Query: 4 SGQPPDLK--KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGN 52
SG P K +Y++ ++++ + R+IVG FD+ MN+VI + E +
Sbjct: 2 SGMPKSSKMLQYINYRMRVTIQDGRVIVGRFLAFDKHMNVVICDAEEFRRIRQKGKEDRE 61
Query: 53 EKNDIGMVVIRGNSVV--TVEALEP 75
EK +GM++IRG +VV +VEA P
Sbjct: 62 EKRTLGMILIRGETVVSMSVEAPPP 86
>gi|344303705|gb|EGW33954.1| hypothetical protein SPAPADRAFT_59353 [Spathaspora passalidarum
NRRL Y-27907]
Length = 80
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 1 MSRSGQPPDLKKY-MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKND--- 56
MS +P DL ++ +D+ + IKL R I G L+G+D N+V+ E N+ ND
Sbjct: 1 MSTKEEPLDLIRFHLDEFVLIKLRGAREIKGKLQGYDSHCNMVLSEAEEYIYNDSNDDVE 60
Query: 57 ---IGMVVIRGNSVVTV 70
MV +RG+SV+ +
Sbjct: 61 TKKTEMVFVRGDSVILI 77
>gi|145237192|ref|XP_001391243.1| small nuclear ribonucleoprotein E [Aspergillus niger CBS 513.88]
gi|134075709|emb|CAK96601.1| unnamed protein product [Aspergillus niger]
gi|350635406|gb|EHA23767.1| hypothetical protein ASPNIDRAFT_40173 [Aspergillus niger ATCC
1015]
gi|358369432|dbj|GAA86046.1| small nuclear ribonucleoprotein SmE [Aspergillus kawachii IFO
4308]
Length = 95
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND------IGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLVID+ VEV K++ +G ++++G++V ++A++
Sbjct: 43 IEGKIRGFDEFMNLVIDDAVEVRMATKSEEEKRRPLGQILLKGDNVSLIQAVQ 95
>gi|145492122|ref|XP_001432059.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145499004|ref|XP_001435488.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399168|emb|CAK64662.1| unnamed protein product [Paramecium tetraurelia]
gi|124402621|emb|CAK68091.1| unnamed protein product [Paramecium tetraurelia]
Length = 95
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 23 NANRMIVGTLRGFDQFMNLVIDNTVEVNGNEK--NDIGMVVIRGNSVVTVEALEPVS 77
N N I G L GFD+++NLV+D VE + K ++G ++++G ++V V LE V
Sbjct: 38 NDNLRIQGKLAGFDEYLNLVLDRAVEYDRKTKATKELGKILLKGENIVLVRTLEDVK 94
>gi|321249860|ref|XP_003191600.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus gattii
WM276]
gi|317458067|gb|ADV19813.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
gattii WM276]
Length = 95
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
++ Y+D +Q+ L R+IVG L+G+D NL++ ++VE G E +G+ VI+G
Sbjct: 4 IESYVDHTVQVILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMEQGVEMVPLGLYVIKG 63
Query: 65 NSVVTVEALE 74
++V V L+
Sbjct: 64 DNVAVVAELD 73
>gi|67623475|ref|XP_668020.1| small nuclear ribonucleoprotein [Cryptosporidium hominis TU502]
gi|54659204|gb|EAL37793.1| similar to small nuclear ribonucleoprotein [Cryptosporidium
hominis]
Length = 139
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV----NGNE----KNDIGMVV 61
++KY++ ++++ + +R++VG L FD+ MNLV+ + E G E K +G+++
Sbjct: 1 MQKYINYRIRVTVQDDRVMVGNLMAFDRHMNLVLSDCQEYRRVKKGEEPKELKRSLGLIM 60
Query: 62 IRGNSVVTVEALEP 75
+RG ++VT A P
Sbjct: 61 LRGENIVTFVAEAP 74
>gi|320165888|gb|EFW42787.1| hypothetical protein CAOG_07919 [Capsaspora owczarzaki ATCC
30864]
Length = 85
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVIRGNS 66
P L K + +KL + GTL D +MNL + NT+E V+G E + +G V+IR N+
Sbjct: 11 PFLASLSGKPIIVKLKWGQEYHGTLLASDGYMNLQLGNTIEHVDGEETHRLGEVLIRCNN 70
Query: 67 VVTVEALEPVSKSQ 80
V+ V+A E + Q
Sbjct: 71 VLYVKAGEEQAAMQ 84
>gi|9294633|dbj|BAB02972.1| unnamed protein product [Arabidopsis thaliana]
Length = 118
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 17 KLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVTVEA 72
KL + L R ++GTLR FDQF N V++ E + G + DI G+ VIRG +VV +
Sbjct: 12 KLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIGE 71
Query: 73 LE 74
L+
Sbjct: 72 LD 73
>gi|66529526|ref|XP_624639.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Apis
mellifera]
gi|340709308|ref|XP_003393252.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Bombus
terrestris]
gi|350425090|ref|XP_003494008.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Bombus
impatiens]
gi|380023316|ref|XP_003695469.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Apis
florea]
Length = 134
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGN 65
L + +DKKL + L R ++G LR DQF N+V+ T+E G E DI G+ ++RG
Sbjct: 10 LLEELDKKLMVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGE 69
Query: 66 SVVTV 70
+VV +
Sbjct: 70 NVVLL 74
>gi|323337049|gb|EGA78305.1| Lsm1p [Saccharomyces cerevisiae Vin13]
Length = 172
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN-----DIGMVVIRGNSV 67
+D+K+ + L RM+ G LR FDQ+ NL++ + VE + +E+N D G+ +IRG +V
Sbjct: 50 VDRKIXVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 109
Query: 68 VTV 70
V +
Sbjct: 110 VML 112
>gi|405117913|gb|AFR92688.1| hypothetical protein CNAG_00557 [Cryptococcus neoformans var.
grubii H99]
Length = 95
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
++ Y+D +Q+ L R+IVG L+G+D NL++ ++VE G E +G+ VI+G
Sbjct: 4 IESYVDHTVQVILQDGRIIVGKLKGYDPRTNLILSDSVEREFSMEQGVEMIPLGLYVIKG 63
Query: 65 NSVVTVEALE 74
++V V L+
Sbjct: 64 DNVAVVAELD 73
>gi|261204379|ref|XP_002629403.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis
SLH14081]
gi|239587188|gb|EEQ69831.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis
SLH14081]
gi|239614272|gb|EEQ91259.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis ER-3]
gi|327356357|gb|EGE85214.1| small nuclear ribonucleoprotein E [Ajellomyces dermatitidis ATCC
18188]
Length = 94
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND------IGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLV+D+ VEV K + +G ++++G++V ++AL+
Sbjct: 42 IEGKIRGFDEFMNLVVDDAVEVRLATKTEEEKRRQLGQILLKGDNVSLIQALQ 94
>gi|226529351|ref|NP_001150391.1| LOC100284021 [Zea mays]
gi|194699348|gb|ACF83758.1| unknown [Zea mays]
gi|195638896|gb|ACG38916.1| LSM Sm-like protein family member [Zea mays]
gi|195642734|gb|ACG40835.1| LSM Sm-like protein family member [Zea mays]
gi|413946381|gb|AFW79030.1| LSM Sm-like protein family member [Zea mays]
Length = 99
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-----NGNEKNDIGMVVI 62
P L+ +D+ + + N R IVGTLRGFDQ N+++D + E G ++ +G+ +I
Sbjct: 6 PALEPLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSRKEGVQQLVLGLYII 65
Query: 63 RGNSVVTV 70
RG+++ V
Sbjct: 66 RGDNISVV 73
>gi|302790966|ref|XP_002977250.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
gi|300155226|gb|EFJ21859.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
Length = 103
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 1 MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKN 55
M+ + + L+ +++ + + N R IVG L+G+DQ NL+ID + E G E++
Sbjct: 1 MASANKDTGLEYLVNQLISVITNDGRNIVGMLKGYDQATNLIIDESHERVYSTTTGVEQH 60
Query: 56 DIGMVVIRGNSVVTVEALE 74
+G+ +IRG+++ V L+
Sbjct: 61 VLGLYIIRGDNIAVVGELD 79
>gi|401889144|gb|EJT53084.1| hypothetical protein A1Q1_00091 [Trichosporon asahii var. asahii
CBS 2479]
Length = 82
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE 53
+L +Y+D+ +++K R + G L+G+DQ MNLV+D VE +E
Sbjct: 31 NLAQYVDQSIRVKFLGGREVTGVLKGYDQLMNLVMDEVVETYESE 75
>gi|396458899|ref|XP_003834062.1| similar to small nuclear ribonucleoprotein E [Leptosphaeria
maculans JN3]
gi|312210611|emb|CBX90697.1| similar to small nuclear ribonucleoprotein E [Leptosphaeria
maculans JN3]
Length = 94
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 23 NANRMIVGTLRGFDQFMNLVIDNTVEVN------GNEKNDIGMVVIRGNSVVTVEAL 73
N I G LRGFD+FMNLVID+ VEV E+ +G ++++G+++ ++ L
Sbjct: 37 NLGLRIEGKLRGFDEFMNLVIDDAVEVTLAKKDAPEERRKVGQILLKGDNISLIQQL 93
>gi|451995795|gb|EMD88263.1| hypothetical protein COCHEDRAFT_15041 [Cochliobolus
heterostrophus C5]
Length = 92
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 23 NANRMIVGTLRGFDQFMNLVIDNTVEVN------GNEKNDIGMVVIRGNSVVTVEALE 74
N I G LRGFD+FMNLVID+ +EV E+ +G ++++G+++ ++ L+
Sbjct: 35 NLGMRIEGKLRGFDEFMNLVIDDAIEVTLAKKDAPEERRKVGQILLKGDNISLIQQLQ 92
>gi|190346690|gb|EDK38837.2| hypothetical protein PGUG_02935 [Meyerozyma guilliermondii ATCC
6260]
Length = 84
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 35/47 (74%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMN+VID+ VE+ + + +G ++++G+++ + ++E
Sbjct: 37 IQGRIRGFDEFMNIVIDDAVEILKDSEVPLGRILLKGDNITLISSVE 83
>gi|161527857|ref|YP_001581683.1| like-Sm ribonucleoprotein core [Nitrosopumilus maritimus SCM1]
gi|160339158|gb|ABX12245.1| Like-Sm ribonucleoprotein core [Nitrosopumilus maritimus SCM1]
Length = 80
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 38/56 (67%)
Query: 15 DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTV 70
DK + ++L N+ + GTL+ FD MNL ++N +V+ + N IG V++RG++++ +
Sbjct: 17 DKVVLLRLRNNKTVQGTLKDFDIHMNLTLENAEDVSEEKPNPIGKVLLRGDNILAI 72
>gi|213404570|ref|XP_002173057.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
gi|212001104|gb|EEB06764.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
Length = 94
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI---GMVVIRG 64
L +++++++++ N R ++G+LRGFDQ NL++ N+ E ++ +++ ++ G+ +IRG
Sbjct: 3 LAEFVEQQVEVITNDGRCVLGSLRGFDQTTNLILSNSKERLISWDQETEVIPLGLYIIRG 62
Query: 65 NSVVTV 70
+V V
Sbjct: 63 ENVAMV 68
>gi|146418481|ref|XP_001485206.1| hypothetical protein PGUG_02935 [Meyerozyma guilliermondii ATCC
6260]
Length = 84
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 35/47 (74%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEALE 74
I G +RGFD+FMN+VID+ VE+ + + +G ++++G+++ + ++E
Sbjct: 37 IQGRIRGFDEFMNIVIDDAVEILKDSEVPLGRILLKGDNITLISSVE 83
>gi|317139460|ref|XP_003189167.1| small nuclear ribonucleoprotein E [Aspergillus oryzae RIB40]
Length = 95
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 37/53 (69%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEV-----NGNEKND-IGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLV+D+ VEV G EK +G ++++G++V ++A++
Sbjct: 43 IEGKIRGFDEFMNLVVDDAVEVRLATKTGEEKRRPLGQILLKGDNVSLIQAVQ 95
>gi|401404091|ref|XP_003881646.1| putative u6 snRNA-associated Sm-like protein [Neospora caninum
Liverpool]
gi|325116059|emb|CBZ51613.1| putative u6 snRNA-associated Sm-like protein [Neospora caninum
Liverpool]
Length = 99
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 12/81 (14%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN---------DIGM 59
DL K++++++++K + R I G L+G D NLV+D T E + ++ +G+
Sbjct: 11 DLNKFLNQRVRVKFSGGREITGVLKGHDAVSNLVLDETEEFLRDPEDPYKLLDQTRTLGL 70
Query: 60 VVIRGNSVVTVEALEPVSKSQ 80
+V RG +VV + PV+ ++
Sbjct: 71 IVARGTAVVLI---SPVAGTE 88
>gi|17544148|ref|NP_500964.1| Protein LSM-8 [Caenorhabditis elegans]
gi|351059336|emb|CCD74179.1| Protein LSM-8 [Caenorhabditis elegans]
Length = 98
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDI-----GMVVIRG 64
L YM++ + + R+IVG L+GFDQ +NLVI++ E + +E + G+ +IRG
Sbjct: 5 LDAYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRG 64
Query: 65 NSVVTV 70
+V +
Sbjct: 65 ENVAII 70
>gi|169598900|ref|XP_001792873.1| hypothetical protein SNOG_02259 [Phaeosphaeria nodorum SN15]
gi|160704495|gb|EAT90471.2| hypothetical protein SNOG_02259 [Phaeosphaeria nodorum SN15]
Length = 163
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 39/108 (36%)
Query: 9 DLKKYMDKKLQIKLNANRM-------------------------------IVGTLRGFDQ 37
DL KYMDK+L +K + R ++GTL+G+DQ
Sbjct: 48 DLSKYMDKQLTVKFSGGREERKTNGVMVAMFALGNRKILWKERHPLTHPPVIGTLKGYDQ 107
Query: 38 FMNLVIDNTVEVNGNEKNDI-----GMVVIRGNSVVTVEALEPVSKSQ 80
MNLV+D E +++ +I G++V RG +V + PV S+
Sbjct: 108 LMNLVLDEVKEALTDDEGNIRYRKLGLIVARGTLLVVI---SPVDGSE 152
>gi|399949646|gb|AFP65304.1| small nuclear ribonucleoprotein E [Chroomonas mesostigmatica
CCMP1168]
Length = 82
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 21 KLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-DIGMVVIRGNSVVTVEALEPVS 77
KLN I+G + GFD+FMN+V++N E+N + KN +G ++I+G+ + + L +S
Sbjct: 27 KLNT---IIGIILGFDEFMNIVLENAFEINSSGKNIFLGHIMIKGDCIAIISDLSKLS 81
>gi|355571637|ref|ZP_09042865.1| Like-Sm ribonucleoprotein core [Methanolinea tarda NOBI-1]
gi|354825270|gb|EHF09500.1| Like-Sm ribonucleoprotein core [Methanolinea tarda NOBI-1]
Length = 75
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 20 IKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTV 70
+ L R + G L+G+D MNLV+D E+ G + +G +++RG++V+ +
Sbjct: 20 VSLKGGRELRGVLQGYDVHMNLVLDKAEEIEGGQSRSVGTLIVRGDNVIYI 70
>gi|259480327|tpe|CBF71356.1| TPA: small nuclear ribonucleoprotein SmE, putative
(AFU_orthologue; AFUA_7G05980) [Aspergillus nidulans
FGSC A4]
Length = 94
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND------IGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLVID+ VEV K++ +G ++++G++V ++A++
Sbjct: 42 IEGKIRGFDEFMNLVIDDAVEVRLATKSEEEKRRPLGQILLKGDNVSLIQAVQ 94
>gi|336376345|gb|EGO04680.1| hypothetical protein SERLA73DRAFT_173904 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389388|gb|EGO30531.1| hypothetical protein SERLADRAFT_454838 [Serpula lacrymans var.
lacrymans S7.9]
Length = 136
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNE----KNDIGMVVIRGNSVV 68
+D+K+ + L R + G LR +DQF NLV+++TVE +E +N G+ VIRG +VV
Sbjct: 17 VDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERLYHENTFAENWHGIFVIRGENVV 75
>gi|296411223|ref|XP_002835333.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629111|emb|CAZ79490.1| unnamed protein product [Tuber melanosporum]
Length = 93
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 6/52 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKN------DIGMVVIRGNSVVTVEAL 73
I G +RGFD+FMNLVID+ VEV K+ ++G ++++G++V +++L
Sbjct: 42 IEGKIRGFDEFMNLVIDDAVEVKLKTKDEEESRRELGQILLKGDNVSLIQSL 93
>gi|156551834|ref|XP_001604291.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Nasonia vitripennis]
Length = 96
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y++ + I + R +GTL+GFDQ +NL++D + E G E+ +G+ +IRG
Sbjct: 5 LESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLHIIRG 64
Query: 65 NSVVTVEALE 74
++V + L+
Sbjct: 65 DNVAVIGELD 74
>gi|58258887|ref|XP_566856.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus neoformans
var. neoformans JEC21]
gi|134107025|ref|XP_777825.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260523|gb|EAL23178.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222993|gb|AAW41037.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 95
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN-----GNEKNDIGMVVIRG 64
++ Y+D +Q+ L R+IVG L+G+D NL++ ++VE G E +G+ VI+G
Sbjct: 4 IESYVDHTVQVILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMDQGVEMIPLGLYVIKG 63
Query: 65 NSVVTVEALE 74
++V V L+
Sbjct: 64 DNVAVVAELD 73
>gi|405968315|gb|EKC33396.1| Nucleolar protein 6 [Crassostrea gigas]
Length = 1150
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 1 MSRSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIG 58
MSR P + LK+ + + + +KLN+ G L D +MN+ ++ T E VNG KN G
Sbjct: 1072 MSRKQTPSEFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYG 1131
Query: 59 MVVIRGNSVVTV 70
IRGN+V+ +
Sbjct: 1132 DAFIRGNNVLYI 1143
>gi|390939095|ref|YP_006402833.1| Sm ribonucleoprotein-like protein [Desulfurococcus fermentans DSM
16532]
gi|390192202|gb|AFL67258.1| Like-Sm ribonucleoprotein core [Desulfurococcus fermentans DSM
16532]
Length = 75
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGNSV 67
L++ + K++ IK N + G LR FDQ +N+V+D+ E+ NG+ + +G VVIRG++V
Sbjct: 9 LEENLGKQVLIKTKDNIPLRGKLRSFDQHLNIVLDDAEEILSNGSTRK-LGTVVIRGDTV 67
Query: 68 VTVEAL 73
V + L
Sbjct: 68 VLISPL 73
>gi|281200299|gb|EFA74520.1| putative small nuclear ribonucleoparticle-associated protein
[Polysphondylium pallidum PN500]
Length = 250
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGMVVI 62
++++ ++++ + R+IVG FD+ MN+VI + E + EK +GMV+I
Sbjct: 11 QFINWRIRVTIQDGRVIVGRFLAFDKHMNVVICDAEEFRRIKQKGKEDREEKRTLGMVLI 70
Query: 63 RGNSVVTVEALEP 75
RG +VV++ A P
Sbjct: 71 RGETVVSLSAESP 83
>gi|124485152|ref|YP_001029768.1| hypothetical protein Mlab_0325 [Methanocorpusculum labreanum Z]
gi|124362693|gb|ABN06501.1| Like-Sm ribonucleoprotein, core [Methanocorpusculum labreanum Z]
Length = 77
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 30 GTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEAL 73
G L D+++NL ++ TVE+ N + +IG VVIRGN+++T+ L
Sbjct: 33 GRLVAMDEYLNLHLEETVEITANGRRNIGTVVIRGNNILTISPL 76
>gi|291225628|ref|XP_002732802.1| PREDICTED: Sm protein F-like [Saccoglossus kowalevskii]
Length = 79
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 1 MSRSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIG 58
MSR P D LK+ + + + +KLN+ G L D +MN+ ++ T E VNG KN G
Sbjct: 1 MSRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYG 60
Query: 59 MVVIRGNSVVTVEA 72
IRGN+V+ +
Sbjct: 61 DAFIRGNNVLYIST 74
>gi|302422556|ref|XP_003009108.1| small nuclear ribonucleoprotein E [Verticillium albo-atrum
VaMs.102]
gi|261352254|gb|EEY14682.1| small nuclear ribonucleoprotein E [Verticillium albo-atrum
VaMs.102]
gi|346970265|gb|EGY13717.1| LSM domain-containing protein [Verticillium dahliae VdLs.17]
Length = 94
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 13/75 (17%)
Query: 6 QPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV------NGNE-KNDIG 58
Q ++ ++ ++L I++ G +RGFD+FMNLVIDN VEV N E + +G
Sbjct: 26 QQATVQVWLYEQLSIRIE------GKIRGFDEFMNLVIDNAVEVKQITKTNKEETRRSLG 79
Query: 59 MVVIRGNSVVTVEAL 73
++++G++V +++L
Sbjct: 80 QILLKGDNVSLIQSL 94
>gi|189210563|ref|XP_001941613.1| small nuclear ribonucleoprotein E [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330923223|ref|XP_003300153.1| hypothetical protein PTT_11315 [Pyrenophora teres f. teres 0-1]
gi|187977706|gb|EDU44332.1| small nuclear ribonucleoprotein E [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325858|gb|EFQ91754.1| hypothetical protein PTT_11315 [Pyrenophora teres f. teres 0-1]
Length = 93
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 23 NANRMIVGTLRGFDQFMNLVIDNTVEVN------GNEKNDIGMVVIRGNSVVTVEAL 73
N I G LRGFD+FMNLVID+ +EV E+ +G ++++G+++ ++ L
Sbjct: 37 NLGMRIEGKLRGFDEFMNLVIDDAIEVKLAKKDAPEERRKVGQILLKGDNISLIQQL 93
>gi|323447461|gb|EGB03380.1| hypothetical protein AURANDRAFT_72740 [Aureococcus
anophagefferens]
Length = 129
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 12/79 (15%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKN-------DIGMVVI 62
+DKK+ I L R +VG +R FDQF N+V+++T E + +E +G+ VI
Sbjct: 20 LDKKVLIILRDGRNLVGVMRSFDQFSNVVLEDTYERRVVIPDDESQPAVYGDVPLGLYVI 79
Query: 63 RGNSVVTV-EALEPVSKSQ 80
RG+SVV + E E + S+
Sbjct: 80 RGDSVVLLGEVAEELEASE 98
>gi|242021605|ref|XP_002431235.1| lsm1, putative [Pediculus humanus corporis]
gi|212516484|gb|EEB18497.1| lsm1, putative [Pediculus humanus corporis]
Length = 139
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQF NLV+ T+E G E DI G+ ++RG ++V
Sbjct: 19 LDKKLMVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGKEYGDIYRGVFIVRGENMVL 78
Query: 70 V 70
+
Sbjct: 79 L 79
>gi|366990971|ref|XP_003675253.1| hypothetical protein NCAS_0B07980 [Naumovozyma castellii CBS 4309]
gi|342301117|emb|CCC68882.1| hypothetical protein NCAS_0B07980 [Naumovozyma castellii CBS 4309]
Length = 175
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV------EVNGNEKNDIGMVVIRGNSV 67
+D+K+ + L +++ G LR FDQ+ NL++ + V E N +N++G+ +IRG +V
Sbjct: 53 VDRKIFVLLRDGKLLFGILRTFDQYANLILQHCVERIYLTEENKYAENELGIFMIRGENV 112
Query: 68 VTV 70
V +
Sbjct: 113 VML 115
>gi|237839969|ref|XP_002369282.1| u6 snRNA-associated Sm-like protein, putative [Toxoplasma gondii
ME49]
gi|211966946|gb|EEB02142.1| u6 snRNA-associated Sm-like protein, putative [Toxoplasma gondii
ME49]
gi|221484662|gb|EEE22956.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221504848|gb|EEE30513.1| small nuclear ribonucleoprotein G, putative [Toxoplasma gondii
VEG]
Length = 99
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN---------DIGM 59
DL K++++++++K + R I G L+G D NLV+D T E + ++ +G+
Sbjct: 11 DLNKFLNQRVRVKFSGGREITGVLKGHDAVSNLVLDETEEFLRDPEDPYKLLDQTRTLGL 70
Query: 60 VVIRGNSVVTVEALE 74
+V RG +VV + ++
Sbjct: 71 IVARGTAVVLISPVD 85
>gi|224010870|ref|XP_002294392.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969887|gb|EED88226.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 131
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN---------GNEKNDIGM 59
+L K +D +++K R + G LRG+D+ +NLV+D+ E N+ +G+
Sbjct: 37 ELAKLVDSSVRVKCLGGRELRGALRGYDELVNLVLDDCEEFMRDPEDPETITNQTRKLGL 96
Query: 60 VVIRGNSVVTV 70
VVIRG V V
Sbjct: 97 VVIRGTQVSLV 107
>gi|403222744|dbj|BAM40875.1| U6 snRNA-associated sm-like protein [Theileria orientalis strain
Shintoku]
Length = 89
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 11/69 (15%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----------VNGNEKNDIG 58
+L K+++K++ +K + R + G L+G D NLV+D+TVE ++G +N +G
Sbjct: 16 NLNKHLNKEVYVKFSGGREVKGVLKGHDAMSNLVLDDTVELLRSIDDPSTLSGETRN-LG 74
Query: 59 MVVIRGNSV 67
++V RG SV
Sbjct: 75 LLVARGTSV 83
>gi|403223071|dbj|BAM41202.1| small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 94
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEV--NGNEKNDIGMVVIRGNSVVTVEA 72
I GT+RGFD++MN+V+D+ EV N K D+G ++++G+ + + A
Sbjct: 44 IEGTIRGFDEYMNMVLDDAQEVYMKKNLKKDVGRILLKGDCMTLITA 90
>gi|254166807|ref|ZP_04873661.1| hypothetical protein ABOONEI_1899 [Aciduliprofundum boonei T469]
gi|254167437|ref|ZP_04874289.1| hypothetical protein ABOONEI_2250 [Aciduliprofundum boonei T469]
gi|289596330|ref|YP_003483026.1| Like-Sm ribonucleoprotein core [Aciduliprofundum boonei T469]
gi|197623700|gb|EDY36263.1| hypothetical protein ABOONEI_2250 [Aciduliprofundum boonei T469]
gi|197624417|gb|EDY36978.1| hypothetical protein ABOONEI_1899 [Aciduliprofundum boonei T469]
gi|289534117|gb|ADD08464.1| Like-Sm ribonucleoprotein core [Aciduliprofundum boonei T469]
Length = 72
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVV 68
L+ +++K++ + L NR++ G L G+D +MN+V+ +T E +G V++RGN+VV
Sbjct: 8 LENFLNKRISLLLKDNRVLEGKLVGYDDYMNMVLMDTEEKTEEMTRRLGTVILRGNNVV 66
>gi|123486864|ref|XP_001324817.1| Sm protein [Trichomonas vaginalis G3]
gi|121907706|gb|EAY12594.1| Sm protein [Trichomonas vaginalis G3]
Length = 76
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 8 PDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG---NEKNDIGMVVIRG 64
P++K + K+++I +N R +GTL G DQFMNL + V++ + + VIRG
Sbjct: 7 PEMKSLLQKQVRITINQKREAIGTLVGIDQFMNLSLRR-VQIKAPFDPKPVVVDSCVIRG 65
Query: 65 NSVVTVEAL 73
SV+++EA+
Sbjct: 66 ASVLSLEAI 74
>gi|323332984|gb|EGA74386.1| Lsm1p [Saccharomyces cerevisiae AWRI796]
Length = 167
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN-----DIGMVVIRGNSV 67
+D+K+ + L RM+ G LR FDQ+ NL++ + VE + +E+N D G+ +IRG +V
Sbjct: 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 109
Query: 68 VTV 70
V +
Sbjct: 110 VML 112
>gi|384494127|gb|EIE84618.1| hypothetical protein RO3G_09328 [Rhizopus delemar RA 99-880]
Length = 125
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---VNGNEKNDI--GMVVIRGNSVV 68
+DKKL + L R ++G LR FDQF NLV+ +T+E V G DI G+ +IRG +VV
Sbjct: 19 IDKKLMVVLRDGRKLIGILRSFDQFANLVLQDTIERIYVRGC-YGDIPRGVFLIRGENVV 77
>gi|47210706|emb|CAF89998.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 8/78 (10%)
Query: 10 LKKYMDK---KLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVV 61
L+ Y+++ + I + RMIVGTL+GFDQ +NL++D + E G E+ +G+ +
Sbjct: 5 LESYINRDSGTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYI 64
Query: 62 IRGNSVVTVEALEPVSKS 79
+RG++V + ++ + S
Sbjct: 65 VRGDNVAVIGEIDEETDS 82
>gi|5870129|gb|AAD54488.1| small nuclear ribonucleoprotein B [Homo sapiens]
Length = 234
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVI-----------DNTVEVNGNEKNDIGMV 60
+++D +++ L R+ +GT + FD+ MNL++ N+ + EK +G+V
Sbjct: 11 QHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLV 70
Query: 61 VIRGNSVV--TVEALEPVSKSQ 80
++RG ++V TVE P SQ
Sbjct: 71 LLRGENLVSMTVEGPPPKDVSQ 92
>gi|403221959|dbj|BAM40091.1| small nuclear ribonucleoprotein associated protein b [Theileria
orientalis strain Shintoku]
Length = 153
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVN---GNEKN------DIGMV 60
++ ++ +++ L NR VGTL FD+ MNLV+ + E G +KN +G V
Sbjct: 8 MQHWLQYNVRVTLKDNRKFVGTLVAFDRHMNLVLSDCEEFRMTLGKDKNRTEIKRTLGFV 67
Query: 61 VIRGNSVVTVEALEPV 76
++RG ++V+ A P
Sbjct: 68 LLRGENIVSFTAKSPA 83
>gi|384492879|gb|EIE83370.1| U6 snRNA-associated Sm-like protein LSm6 [Rhizopus delemar RA
99-880]
Length = 79
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 2 SRSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGM 59
++S P D L + + +++KLN+ GTL D +MN+ ++NT E V+G KN G
Sbjct: 5 TKSRTPTDFLGTVLGQTVKVKLNSGIDYKGTLACLDGYMNIALENTEEYVDGRLKNKYGD 64
Query: 60 VVIRGNSVVTVEA 72
IRGN+V+ + A
Sbjct: 65 TFIRGNNVLYISA 77
>gi|255943851|ref|XP_002562693.1| Pc20g01340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587428|emb|CAP85463.1| Pc20g01340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 100
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND------IGMVVIRGNSVVTVEAL 73
I G +RGFD+FMNLVID+ VEV K + +G ++++G++V ++A+
Sbjct: 49 IEGKIRGFDEFMNLVIDDAVEVRLATKTEEEKRRPLGQILLKGDNVSLIQAV 100
>gi|281354201|gb|EFB29785.1| hypothetical protein PANDA_009291 [Ailuropoda melanoleuca]
Length = 56
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 16 KKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVTVEAL 73
KKL+ +LN R G LRG F NL++D +V + + N++G++ + GNS +EAL
Sbjct: 1 KKLRSQLNGGRHGQGLLRGLGPFTNLLMDESVGM--TQPNNVGLMGMGGNSTTIIEAL 56
>gi|449298949|gb|EMC94963.1| hypothetical protein BAUCODRAFT_34961 [Baudoinia compniacensis UAMH
10762]
Length = 198
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 15 DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKNDIGMVVIRGNSV 67
DKKL + L R ++G LR +DQF NLV+ +TVE N D G+ ++RG +V
Sbjct: 79 DKKLMVALRDGRKLIGVLRSWDQFGNLVLQDTVERLFVQNVYADIDRGLFLVRGENV 135
>gi|303277307|ref|XP_003057947.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460604|gb|EEH57898.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIR 63
+L + +D + + + R IVG LRGFDQ NL++D E +G E+ +G+ +IR
Sbjct: 4 ELTELVDTLISVITSDGRNIVGVLRGFDQTTNLILDECFERVYSASSGVEEAPLGLYIIR 63
Query: 64 GNSVVTV 70
G+++ +
Sbjct: 64 GDNIAVI 70
>gi|392341147|ref|XP_003754265.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
gi|392348918|ref|XP_003750235.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
Length = 132
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV------NGNEKNDIGMVVIR 63
L+ Y+++ + + ++ R IVGTL+GFDQ +NL +D + E G E+ +G+ ++R
Sbjct: 40 LENYINRIVDVIISDVRTIVGTLKGFDQTINLTLDESHEWLVFSSSQGVEQVVLGLYIVR 99
Query: 64 GNSVVTV 70
G++V +
Sbjct: 100 GDNVAVI 106
>gi|323354402|gb|EGA86241.1| Lsm1p [Saccharomyces cerevisiae VL3]
Length = 167
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN-----DIGMVVIRGNSV 67
+D+K+ + L RM+ G LR FDQ+ NL++ + VE + +E+N D G+ +IRG +V
Sbjct: 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 109
Query: 68 VTV 70
V +
Sbjct: 110 VML 112
>gi|330802101|ref|XP_003289059.1| hypothetical protein DICPUDRAFT_88331 [Dictyostelium purpureum]
gi|325080893|gb|EGC34430.1| hypothetical protein DICPUDRAFT_88331 [Dictyostelium purpureum]
Length = 250
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
Query: 12 KYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGMVVI 62
+Y++ ++++ + R+IVG FD+ MN+VI + E + EK +GM++I
Sbjct: 12 QYINYRMKVTIQDGRVIVGRFLAFDKHMNVVICDAEEFRRIKQKGKEDREEKRTLGMLLI 71
Query: 63 RGNSVV--TVEALEP 75
RG +VV +VEA P
Sbjct: 72 RGETVVSMSVEAPPP 86
>gi|183232189|ref|XP_001913674.1| U6 snRNA-associated Sm-like protein LSm8 [Entamoeba histolytica
HM-1:IMSS]
gi|169802157|gb|EDS89550.1| U6 snRNA-associated Sm-like protein LSm8, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407034977|gb|EKE37474.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449708988|gb|EMD48345.1| U6 snrnaassociated Sm family LSm8 protein [Entamoeba histolytica
KU27]
Length = 94
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN----DIGMVVIRGN 65
+K+Y++KK+++ ++ +G L G+D FMN+V+ N++E +++ G++++RG+
Sbjct: 4 VKEYINKKVEVVTTLGKVYIGILTGYDNFMNIVLKNSIERTFSKEGVSNISCGLLILRGD 63
Query: 66 SVVTVEALEPVSKSQ 80
++ + L +Q
Sbjct: 64 EIMVIGGLNEEKDTQ 78
>gi|170785183|pdb|3BW1|A Chain A, Crystal Structure Of Homomeric Yeast Lsm3 Exhibiting
Novel Octameric Ring Organisation
gi|170785184|pdb|3BW1|B Chain B, Crystal Structure Of Homomeric Yeast Lsm3 Exhibiting
Novel Octameric Ring Organisation
Length = 96
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 7 PPDLKKY-MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKND----I 57
P DL K +D+++ IKL R +VGTL+ FD N+V+ + VE +N E ++
Sbjct: 11 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 70
Query: 58 GMVVIRGNSVVTV 70
MV IRG++V +
Sbjct: 71 EMVFIRGDTVTLI 83
>gi|156087671|ref|XP_001611242.1| LSM domain containing protein [Babesia bovis]
gi|154798496|gb|EDO07674.1| LSM domain containing protein [Babesia bovis]
Length = 103
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV---------NGNEKNDIGMV 60
L Y++KK+ +K + R + G LRG D NLV+D T E ++ +G++
Sbjct: 17 LDAYLNKKVYVKFSGGREVQGILRGHDVMSNLVLDETEEFLRDPDDLDRVTDKTRQLGLL 76
Query: 61 VIRGNSVVTVEALEPVSK 78
V RG SV + +E K
Sbjct: 77 VARGTSVTVIHPVEGAEK 94
>gi|398366287|ref|NP_013543.3| Lsm3p [Saccharomyces cerevisiae S288c]
gi|12230246|sp|P57743.1|LSM3_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm3; AltName:
Full=SmX4 protein
gi|151940954|gb|EDN59336.1| snRNP protein [Saccharomyces cerevisiae YJM789]
gi|190405474|gb|EDV08741.1| snRNP protein [Saccharomyces cerevisiae RM11-1a]
gi|256271118|gb|EEU06213.1| Lsm3p [Saccharomyces cerevisiae JAY291]
gi|259148415|emb|CAY81662.1| Lsm3p [Saccharomyces cerevisiae EC1118]
gi|285813843|tpg|DAA09739.1| TPA: Lsm3p [Saccharomyces cerevisiae S288c]
gi|349580131|dbj|GAA25292.1| K7_Lsm3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297940|gb|EIW09039.1| Lsm3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 89
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 7 PPDLKKY-MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE----VNGNEKND----I 57
P DL K +D+++ IKL R +VGTL+ FD N+V+ + VE +N E ++
Sbjct: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63
Query: 58 GMVVIRGNSVVTV 70
MV IRG++V +
Sbjct: 64 EMVFIRGDTVTLI 76
>gi|452980005|gb|EME79767.1| hypothetical protein MYCFIDRAFT_81234 [Pseudocercospora fijiensis
CIRAD86]
Length = 100
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 11/57 (19%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVN-----------GNEKNDIGMVVIRGNSVVTVEAL 73
I G +RGFD+FMNLVID+ VEV +++ ++G ++++G++V +++L
Sbjct: 43 IEGKIRGFDEFMNLVIDDAVEVKQPGKGETEEDVKDQRREVGQILLKGDNVCLIQSL 99
>gi|116753552|ref|YP_842670.1| small nuclear ribonucleoprotein [Methanosaeta thermophila PT]
gi|116665003|gb|ABK14030.1| Small nuclear ribonucleoprotein, LSM family [Methanosaeta
thermophila PT]
Length = 71
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVVT 69
L + ++ + ++L R G L+G+D MNLV++NT E+ IG V++RG++VV
Sbjct: 9 LNESLNSPVIVRLKDGRAFRGELQGYDIHMNLVLENTEEIAEGTARKIGAVIVRGDNVVY 68
Query: 70 V 70
+
Sbjct: 69 I 69
>gi|383320750|ref|YP_005381591.1| Small nuclear ribonucleoprotein, LSM family [Methanocella
conradii HZ254]
gi|379322120|gb|AFD01073.1| Small nuclear ribonucleoprotein, LSM family [Methanocella
conradii HZ254]
Length = 72
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 4 SGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKN-DIGMVV 61
S +P D L ++ + ++L R G L+G+D MNLV++N E+ NE++ +G ++
Sbjct: 2 SQRPLDVLNDALNSPVIVRLKGGREFRGELQGYDMHMNLVLENAEELKENEESRKLGTII 61
Query: 62 IRGNSVVTV 70
+RG++VV V
Sbjct: 62 VRGDTVVYV 70
>gi|363748022|ref|XP_003644229.1| hypothetical protein Ecym_1162 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887861|gb|AET37412.1| hypothetical protein Ecym_1162 [Eremothecium cymbalariae
DBVPG#7215]
Length = 83
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 4 SGQPPDLKKY-MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGN---EK 54
S P DL + +D+K+ +KL R + GTL+ FD N+V+ + E V+GN E
Sbjct: 2 SDTPLDLLRLNLDEKVYVKLRGARKLTGTLQAFDSHCNIVLSDAEETIYELVDGNLRFET 61
Query: 55 NDIGMVVIRGNSVVTVEA 72
M+ +RG+SV V A
Sbjct: 62 KTSEMIFVRGDSVTLVTA 79
>gi|355560937|gb|EHH17623.1| hypothetical protein EGK_14070 [Macaca mulatta]
Length = 96
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y+++ + + + RMIVGTL+GFDQ +NL+++ + E G ++ +G+ ++RG
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILNESHERVFSSSQGVKQVVLGLYIVRG 64
Query: 65 NSVVTVEALEPVSKS 79
++V + ++ + S
Sbjct: 65 DNVAVIGEIDEETDS 79
>gi|307596528|ref|YP_003902845.1| Sm ribonucleoprotein-like protein [Vulcanisaeta distributa DSM
14429]
gi|307551729|gb|ADN51794.1| Like-Sm ribonucleoprotein core [Vulcanisaeta distributa DSM
14429]
Length = 77
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMVVIRGNSVV 68
+L+K ++K + +KL I G L G+DQ +NL++ NT EVN G+++IRG++V+
Sbjct: 11 ELQKSLNKVILVKLRNGTEIRGVLVGYDQHLNLLLTNTEEVNPKGGVKGGLMIIRGDTVL 70
Query: 69 TV 70
+
Sbjct: 71 FI 72
>gi|356560171|ref|XP_003548368.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Glycine
max]
Length = 121
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
M +KL + L R ++GTLR FDQF N V++ E + G+ DI G+ VIRG +VV
Sbjct: 12 MLEKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVL 71
Query: 70 VEALE 74
+ L+
Sbjct: 72 IGELD 76
>gi|322784412|gb|EFZ11383.1| hypothetical protein SINV_13023 [Solenopsis invicta]
Length = 102
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y++ + I + R +GTL+GFDQ +N+++D + E G E+ +G+ +IRG
Sbjct: 11 LESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRG 70
Query: 65 NSVVTVEALE 74
++V V L+
Sbjct: 71 DNVAIVGELD 80
>gi|6322337|ref|NP_012411.1| Lsm1p [Saccharomyces cerevisiae S288c]
gi|1353009|sp|P47017.1|LSM1_YEAST RecName: Full=Sm-like protein LSm1; AltName: Full=SPB8 protein
gi|1008320|emb|CAA89419.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270504|gb|AAS56633.1| YJL124C [Saccharomyces cerevisiae]
gi|151945004|gb|EDN63259.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190409383|gb|EDV12648.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|256272133|gb|EEU07133.1| Lsm1p [Saccharomyces cerevisiae JAY291]
gi|285812780|tpg|DAA08678.1| TPA: Lsm1p [Saccharomyces cerevisiae S288c]
gi|323304441|gb|EGA58212.1| Lsm1p [Saccharomyces cerevisiae FostersB]
gi|349579079|dbj|GAA24242.1| K7_Lsm1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298642|gb|EIW09739.1| Lsm1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 172
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN-----DIGMVVIRGNSV 67
+D+K+ + L RM+ G LR FDQ+ NL++ + VE + +E+N D G+ +IRG +V
Sbjct: 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 109
Query: 68 VTV 70
V +
Sbjct: 110 VML 112
>gi|365760012|gb|EHN01761.1| Lsm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401839808|gb|EJT42849.1| LSM1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 172
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN-----DIGMVVIRGNSV 67
+D+K+ + L RM+ G LR FDQ+ NL++ + VE + +E+N D G+ +IRG +V
Sbjct: 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 109
Query: 68 VTV 70
V +
Sbjct: 110 VML 112
>gi|332024909|gb|EGI65097.1| U6 snRNA-associated Sm-like protein LSm8 [Acromyrmex echinatior]
Length = 96
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L+ Y++ + I + R +GTL+GFDQ +NL++D + E G E+ +G+ +IRG
Sbjct: 5 LESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLHIIRG 64
Query: 65 NSVVTV 70
++V V
Sbjct: 65 DNVAIV 70
>gi|405961598|gb|EKC27377.1| U6 snRNA-associated Sm-like protein LSm1 [Crassostrea gigas]
Length = 133
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVT 69
+DKKL + L R ++G LR DQF NLV+ T+E G + DI G+ V+RG +VV
Sbjct: 14 IDKKLLVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKKYGDIPRGIFVVRGENVVL 73
Query: 70 V 70
+
Sbjct: 74 L 74
>gi|321471964|gb|EFX82935.1| hypothetical protein DAPPUDRAFT_100799 [Daphnia pulex]
Length = 96
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-----VNGNEKNDIGMVVIRG 64
L Y+++ + + + R +G L+GFDQ +NL+ID++ E G E+ +G+ +IRG
Sbjct: 5 LDSYVNRSVCVITSDGRNFIGILKGFDQTINLIIDDSHERVFSSTQGVEQVQLGLHIIRG 64
Query: 65 NSVVTV 70
++VV +
Sbjct: 65 DNVVLI 70
>gi|449067225|ref|YP_007434307.1| hypothetical protein SacN8_05970 [Sulfolobus acidocaldarius N8]
gi|449069496|ref|YP_007436577.1| hypothetical protein SacRon12I_05965 [Sulfolobus acidocaldarius
Ron12/I]
gi|449035733|gb|AGE71159.1| hypothetical protein SacN8_05970 [Sulfolobus acidocaldarius N8]
gi|449038004|gb|AGE73429.1| hypothetical protein SacRon12I_05965 [Sulfolobus acidocaldarius
Ron12/I]
Length = 73
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-NGNEKNDIGMVVIRGNSVV 68
L + + + +KL +++ GTL+ +D MNLV++N+ E+ N +G +VIRG++V+
Sbjct: 9 LAESLGSTVLVKLKGEKIVRGTLKSYDMHMNLVLENSEEIMNDGSTRKVGTIVIRGDNVI 68
Query: 69 TV 70
V
Sbjct: 69 LV 70
>gi|168038612|ref|XP_001771794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676925|gb|EDQ63402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 127
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND--IGMVVIRGNSVVT 69
+DKKL + L + I+G LR FDQF N+V++ +E G D +G+ +IRG +VV
Sbjct: 18 LDKKLLVILRDGKKIIGILRSFDQFANVVLEGALERITVGELYCDLPLGLYIIRGENVVL 77
Query: 70 VEALE 74
+ L+
Sbjct: 78 IGELD 82
>gi|389860536|ref|YP_006362775.1| Like-Sm ribonucleoprotein, core [Thermogladius cellulolyticus
1633]
gi|388525439|gb|AFK50637.1| Like-Sm ribonucleoprotein, core [Thermogladius cellulolyticus
1633]
Length = 76
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGN-EKNDIGMVVIRGNSVV 68
L++ + K + IK+ I G LR +DQ +N+V+D+ EV G+ +G +VIRG++VV
Sbjct: 10 LEENVGKIVLIKMKGEVSIRGKLRSYDQHLNIVLDDAEEVRGDGSSRKLGTLVIRGDTVV 69
Query: 69 TVEALEP 75
+ L+
Sbjct: 70 LISPLQA 76
>gi|403157835|ref|XP_003307220.2| small nuclear ribonucleoprotein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163571|gb|EFP74214.2| small nuclear ribonucleoprotein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 96
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 5 GQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVI 62
G P D LK+ + ++ ++LN+ G L D +MN+ ++NT E VNG ++N G +
Sbjct: 25 GTPSDFLKQVVGHQVTVRLNSGVDYRGILSCLDGYMNIALENTEEYVNGIKRNSYGDAFL 84
Query: 63 RGNSVVTVEALE 74
RGN+V+ + +E
Sbjct: 85 RGNNVLYISRVE 96
>gi|290771110|emb|CAY80661.2| Lsm1p [Saccharomyces cerevisiae EC1118]
gi|323347940|gb|EGA82199.1| Lsm1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764929|gb|EHN06447.1| Lsm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 172
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN-----DIGMVVIRGNSV 67
+D+K+ + L RM+ G LR FDQ+ NL++ + VE + +E+N D G+ +IRG +V
Sbjct: 50 VDRKIVVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 109
Query: 68 V 68
V
Sbjct: 110 V 110
>gi|392597347|gb|EIW86669.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 136
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGN--EKNDIGMVVIRGNSVVT 69
+D+K+ + L R + G LR +DQF NLV+++TVE +GN ++ G+ +IRG +VV
Sbjct: 17 VDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAEHWHGLFLIRGENVVL 76
Query: 70 V 70
+
Sbjct: 77 L 77
>gi|291001357|ref|XP_002683245.1| predicted protein [Naegleria gruberi]
gi|284096874|gb|EFC50501.1| predicted protein [Naegleria gruberi]
Length = 103
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 18/87 (20%)
Query: 9 DLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV------NGNEKND------ 56
DL +Y+ K++ +K R + GTLRGFD +NLV+++ E + N + D
Sbjct: 9 DLNQYISKQVLVKFIGGREVYGTLRGFDNMINLVLEDCYEFIRDLQDHHNRQTDENNKQY 68
Query: 57 ---IGMVVIRGNSVVTVEALEPVSKSQ 80
+G+V+ RG S++ L PV ++
Sbjct: 69 VRKLGIVICRGTSLM---HLCPVDGTE 92
>gi|323308589|gb|EGA61833.1| Lsm1p [Saccharomyces cerevisiae FostersO]
Length = 143
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 6/63 (9%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKN-----DIGMVVIRGNSV 67
+D+K+ + L RM+ G LR FDQ+ NL++ + VE + +E+N D G+ +IRG +V
Sbjct: 50 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 109
Query: 68 VTV 70
V +
Sbjct: 110 VML 112
>gi|430813865|emb|CCJ28830.1| unnamed protein product [Pneumocystis jirovecii]
Length = 129
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE------VNGNEKNDIGMVVIR 63
L +DKKL + L + ++G LR FDQ+ NLV+ TVE V G+ G+ +IR
Sbjct: 16 LHSCLDKKLMVILRDGKKLIGILRSFDQYANLVLQGTVERIYVDQVYGDIPR--GVFIIR 73
Query: 64 GNSVVTV 70
G +VV V
Sbjct: 74 GENVVLV 80
>gi|428178017|gb|EKX46894.1| hypothetical protein GUITHDRAFT_152240 [Guillardia theta CCMP2712]
Length = 210
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKND--IGMVVIRGNSVVT 69
+DK++ + L R VG +R FDQ+ N+V+++ E V GN D +G+ VIRG ++V
Sbjct: 94 LDKRVLVTLRDGRHFVGFMRSFDQYGNVVLEDAFERHVVGNSFADERMGLYVIRGENLVL 153
Query: 70 VEALE 74
+ L+
Sbjct: 154 LAELD 158
>gi|238482745|ref|XP_002372611.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus flavus
NRRL3357]
gi|220700661|gb|EED56999.1| small nuclear ribonucleoprotein SmE, putative [Aspergillus flavus
NRRL3357]
Length = 95
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKND------IGMVVIRGNSVVTVEALE 74
I G +RGFD+FMNLV+D+ VEV K + +G ++++G++V ++A++
Sbjct: 43 IEGKIRGFDEFMNLVVDDAVEVRLATKTEEEKRRPLGQILLKGDNVSLIQAVQ 95
>gi|452820116|gb|EME27163.1| U6 snRNA-associated Sm-like protein LSm1 [Galdieria sulphuraria]
Length = 153
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE---VNGNEKND-IGMVVIRGN 65
L +++D+++ + R IVG LR +DQ+ NLV++NT E +N + ++ +G+ +IRG
Sbjct: 34 LVEHIDRQILVLQRDGRYIVGLLRSYDQYANLVLENTFERFVLNDSYCDEPLGVFIIRGE 93
Query: 66 SVVTVEALEPVSKSQ 80
+V + ++ +SQ
Sbjct: 94 NVALLGEVDGEKESQ 108
>gi|319411566|emb|CBQ73610.1| related to LSM8-Component of small nuclear ribonucleoprotein
complexes involved in RNA processing and splicing
[Sporisorium reilianum SRZ2]
Length = 96
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEV-----NGNEKNDIGMVVIRG 64
L++Y+D+ + + R+IVGTLRG D ++++ ++VE G E+ +G+ ++RG
Sbjct: 4 LQQYLDQHVLVITQDGRVIVGTLRGSDAVGSIILASSVERIFSADEGVEEVPLGLYILRG 63
Query: 65 NSVVTV 70
+S+ V
Sbjct: 64 DSICLV 69
>gi|336368839|gb|EGN97181.1| hypothetical protein SERLA73DRAFT_92211 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381639|gb|EGO22790.1| hypothetical protein SERLADRAFT_471211 [Serpula lacrymans var.
lacrymans S7.9]
Length = 98
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 1 MSRSGQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIG 58
++ SG P D LK + K++ ++L + G L D +MN+ ++ T E VNG N G
Sbjct: 21 ITTSGSPTDFLKGVVGKRVIVRLTSGVDYRGVLSCLDGYMNIALEQTEEHVNGTLTNRYG 80
Query: 59 MVVIRGNSVVTVEALEPV 76
+RGN+V+ + A E +
Sbjct: 81 DAFVRGNNVLYISAAEAL 98
>gi|238496495|ref|XP_002379483.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
gi|317147143|ref|XP_003189890.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus oryzae RIB40]
gi|220694363|gb|EED50707.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
Length = 174
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 15 DKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVTV 70
DKKL + L R ++G LR +DQF NLV+ +T+E GN +I G+ ++RG +V+ +
Sbjct: 55 DKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYAEISRGIFLVRGENVLLL 114
>gi|365983954|ref|XP_003668810.1| hypothetical protein NDAI_0B05340 [Naumovozyma dairenensis CBS 421]
gi|343767577|emb|CCD23567.1| hypothetical protein NDAI_0B05340 [Naumovozyma dairenensis CBS 421]
Length = 183
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 14 MDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTV------EVNGNEKNDIGMVVIRGNSV 67
+D+K+ + L R++ G LR FDQ+ NL++ + V E N + ++G+ +IRG +V
Sbjct: 61 VDRKIFVLLRDGRLLFGVLRTFDQYANLILQHCVERIYLSEENKYAEQELGIFMIRGENV 120
Query: 68 VTV 70
V +
Sbjct: 121 VML 123
>gi|453085619|gb|EMF13662.1| LSM-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 99
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 11/57 (19%)
Query: 28 IVGTLRGFDQFMNLVIDNTVEVNGNEKN-----------DIGMVVIRGNSVVTVEAL 73
I G +RGFD+FMNLVID+ VEV + K ++G ++++G++V +++L
Sbjct: 42 IEGKIRGFDEFMNLVIDDAVEVQQSAKGETNEDSKEGRRELGQILLKGDNVCLIQSL 98
>gi|340375810|ref|XP_003386427.1| PREDICTED: small nuclear ribonucleoprotein-associated protein
B'-like [Amphimedon queenslandica]
Length = 223
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 10 LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNG-----------NEKNDIG 58
L ++M ++++ L RM VGT FDQ +NLV+ + E EK +G
Sbjct: 8 LLQHMHHRIRVTLLDGRMFVGTFMAFDQHLNLVLADCEEFRKIRPKNQKLPEREEKRTLG 67
Query: 59 MVVIRGNSVV--TVEALEP 75
+V++RG ++V T+E P
Sbjct: 68 LVLLRGMNLVSLTIEGPPP 86
>gi|328854944|gb|EGG04073.1| hypothetical protein MELLADRAFT_72433 [Melampsora larici-populina
98AG31]
Length = 93
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 5 GQPPD-LKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVVI 62
G P D LK+ + ++ ++LN+ G L D +MN+ ++NT E VNG ++N G +
Sbjct: 22 GTPADFLKQVVGHEVVVRLNSGVDYRGILSCLDGYMNIALENTEEYVNGIKRNSYGDAFV 81
Query: 63 RGNSVVTVEALE 74
RGN+V+ + +E
Sbjct: 82 RGNNVLYISRVE 93
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,151,645,114
Number of Sequences: 23463169
Number of extensions: 37550844
Number of successful extensions: 71099
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 1416
Number of HSP's that attempted gapping in prelim test: 68660
Number of HSP's gapped (non-prelim): 2898
length of query: 80
length of database: 8,064,228,071
effective HSP length: 51
effective length of query: 29
effective length of database: 6,867,606,452
effective search space: 199160587108
effective search space used: 199160587108
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)