BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034894
MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQAC
SLFSSFHICFLFLLTSSENL

High Scoring Gene Products

Symbol, full name Information P value
AT1G10865 protein from Arabidopsis thaliana 5.3e-24
Y18D10A.16 gene from Caenorhabditis elegans 7.0e-06
PET191
Protein required for assembly of cytochrome c oxidase
gene from Saccharomyces cerevisiae 8.1e-05
COA5
Uncharacterized protein
protein from Sus scrofa 0.00013
COA5
Cytochrome c oxidase assembly factor 5
protein from Bos taurus 0.00021
COA5
Cytochrome c oxidase assembly factor 5
protein from Homo sapiens 0.00021

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034894
        (80 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4010713430 - symbol:AT1G10865 "AT1G10865" spec...   275  5.3e-24   1
POMBASE|SPBC16A3.16 - symbol:SPBC16A3.16 "mitochondrial i...   130  1.2e-08   1
WB|WBGene00012483 - symbol:Y18D10A.16 species:6239 "Caeno...   104  7.0e-06   1
UNIPROTKB|E1C792 - symbol:COA5 "Uncharacterized protein" ...    99  2.4e-05   1
SGD|S000003795 - symbol:PET191 "Protein required for asse...    94  8.1e-05   1
UNIPROTKB|F1STD9 - symbol:COA5 "Uncharacterized protein" ...    92  0.00013   1
UNIPROTKB|Q3ZCK8 - symbol:COA5 "Cytochrome c oxidase asse...    90  0.00021   1
UNIPROTKB|Q86WW8 - symbol:COA5 "Cytochrome c oxidase asse...    90  0.00021   1


>TAIR|locus:4010713430 [details] [associations]
            symbol:AT1G10865 "AT1G10865" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 GenomeReviews:CT485782_GR
            InterPro:IPR018793 Pfam:PF10203 HOGENOM:HOG000243245 OMA:PCIPSEC
            EMBL:AK118760 IPI:IPI00516995 RefSeq:NP_001077513.1
            UniGene:At.16752 UniGene:At.64974 PRIDE:Q8GWM1
            EnsemblPlants:AT1G10865.1 GeneID:5007681 KEGG:ath:AT1G10865
            TAIR:At1g10865 PhylomeDB:Q8GWM1 ProtClustDB:CLSN2697857
            Genevestigator:Q8GWM1 Uniprot:Q8GWM1
        Length = 71

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 51/58 (87%), Positives = 53/58 (91%)

Query:     1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKRGQ 58
             M+KSCKGLA ELVKCLSES CVK EKRS R+C GEKSPCIPSECVGLRETYFNCKRGQ
Sbjct:     1 MAKSCKGLAEELVKCLSESICVKGEKRSIRDCTGEKSPCIPSECVGLRETYFNCKRGQ 58


>POMBASE|SPBC16A3.16 [details] [associations]
            symbol:SPBC16A3.16 "mitochondrial inner membrane protein
            involved in cytochrome c oxidase assembly Pet191 (predicted)"
            species:4896 "Schizosaccharomyces pombe" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005829
            "cytosol" evidence=IDA] [GO:0007005 "mitochondrion organization"
            evidence=IC] [GO:0008535 "respiratory chain complex IV assembly"
            evidence=ISO] PomBase:SPBC16A3.16 GO:GO:0005829 GO:GO:0005739
            GO:GO:0005634 EMBL:CU329671 GO:GO:0007005 GO:GO:0008535
            eggNOG:NOG284465 InterPro:IPR018793 Pfam:PF10203 PIR:T39536
            RefSeq:NP_596773.1 STRING:O42921 EnsemblFungi:SPBC16A3.16.1
            GeneID:2539684 KEGG:spo:SPBC16A3.16 HOGENOM:HOG000243245
            OMA:KKSAREC OrthoDB:EOG441TN0 NextBio:20800838 Uniprot:O42921
        Length = 85

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 26/56 (46%), Positives = 33/56 (58%)

Query:     1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKR 56
             M +SCK +  +L  CL  SDC+ V+K+S REC   K   +P EC  L E Y  CKR
Sbjct:     1 MGRSCKVIREDLANCLLHSDCMFVKKKSARECLKNKDE-LPEECKNLIEAYGECKR 55


>WB|WBGene00012483 [details] [associations]
            symbol:Y18D10A.16 species:6239 "Caenorhabditis elegans"
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            GO:GO:0040010 EMBL:AL034393 eggNOG:NOG284465 InterPro:IPR018793
            Pfam:PF10203 HOGENOM:HOG000243245 PIR:T26525 RefSeq:NP_493253.1
            STRING:Q9XW18 PaxDb:Q9XW18 EnsemblMetazoa:Y18D10A.16 GeneID:173157
            KEGG:cel:CELE_Y18D10A.16 UCSC:Y18D10A.16 CTD:173157
            WormBase:Y18D10A.16 InParanoid:Q9XW18 OMA:PCIPSEC NextBio:878509
            Uniprot:Q9XW18
        Length = 96

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSP-CIPSECVGLRETYFNCKR 56
             SC  L   L KC+  S CV+V+ RS +EC   +    +P +C  + + + +CKR
Sbjct:    27 SCDRLRQALKKCIKNSHCVQVQARSAKECIDARGDGSVPDKCFAVLQNFTDCKR 80


>UNIPROTKB|E1C792 [details] [associations]
            symbol:COA5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
            CTD:493753 GeneTree:ENSGT00390000005548 OMA:MRYEGNE
            InterPro:IPR018793 Pfam:PF10203 EMBL:AADN02017688 IPI:IPI00684281
            RefSeq:XP_001232442.1 UniGene:Gga.12244 Ensembl:ENSGALT00000030248
            GeneID:769722 KEGG:gga:769722 NextBio:20919949 Uniprot:E1C792
        Length = 75

 Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 22/54 (40%), Positives = 31/54 (57%)

Query:     3 KSCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKR 56
             ++C G+  +L +CL ES CV  E +S R+C  E        C GL+ T+F CKR
Sbjct:    13 QACSGVREDLRQCLLESPCVLQENKSPRQCLRE------GHCKGLQLTFFACKR 60


>SGD|S000003795 [details] [associations]
            symbol:PET191 "Protein required for assembly of cytochrome c
            oxidase" species:4932 "Saccharomyces cerevisiae" [GO:0003674
            "molecular_function" evidence=ND] [GO:0033617 "mitochondrial
            respiratory chain complex IV assembly" evidence=IMP] [GO:0005758
            "mitochondrial intermembrane space" evidence=IDA] [GO:0005739
            "mitochondrion" evidence=IEA;IDA] [GO:0031305 "integral to
            mitochondrial inner membrane" evidence=IDA] SGD:S000003795
            EMBL:BK006943 GO:GO:0005758 GO:GO:0031305 GO:GO:0033617 EMBL:L36344
            InterPro:IPR018793 Pfam:PF10203 EMBL:X81635 OrthoDB:EOG441TN0
            EMBL:L06067 EMBL:X70013 EMBL:Z49534 EMBL:AY558310 PIR:S28924
            RefSeq:NP_012568.1 ProteinModelPortal:Q02772 DIP:DIP-1619N
            IntAct:Q02772 MINT:MINT-403632 STRING:Q02772 PaxDb:Q02772
            PeptideAtlas:Q02772 EnsemblFungi:YJR034W GeneID:853491
            KEGG:sce:YJR034W CYGD:YJR034w eggNOG:NOG328441 HOGENOM:HOG000173745
            OMA:ICLQRSP NextBio:974122 Genevestigator:Q02772 GermOnline:YJR034W
            Uniprot:Q02772
        Length = 108

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query:     1 MSKSCKGLAMELVKCLSESDCVKVEKRSFRECAG--EKSPCIPSECVGLRETYFNCKRG 57
             M  SCK     +  CL  S CV +E+ + +EC    E +  +P  C+   + + +CKRG
Sbjct:     1 MVASCKDQKKAVAICLQRSPCVMIERHNPQECLDNPELNKDLPELCIAQMKAFLDCKRG 59


>UNIPROTKB|F1STD9 [details] [associations]
            symbol:COA5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
            GeneTree:ENSGT00390000005548 OMA:MRYEGNE InterPro:IPR018793
            Pfam:PF10203 EMBL:CU694916 Ensembl:ENSSSCT00000026882
            Uniprot:F1STD9
        Length = 74

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 21/53 (39%), Positives = 30/53 (56%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKR 56
             +C G+  +L  CL +SDCV  E +S R+C  E S      C  L+ ++F CKR
Sbjct:    13 ACAGVKEDLGACLLQSDCVLQEGKSPRQCLKEGS------CKALQYSFFECKR 59


>UNIPROTKB|Q3ZCK8 [details] [associations]
            symbol:COA5 "Cytochrome c oxidase assembly factor 5"
            species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
            GO:GO:0005739 EMBL:BC102104 IPI:IPI00690682 RefSeq:NP_001181953.1
            UniGene:Bt.54038 Ensembl:ENSBTAT00000019802 GeneID:614794
            KEGG:bta:614794 CTD:493753 eggNOG:NOG284465
            GeneTree:ENSGT00390000005548 HOVERGEN:HBG107093 InParanoid:Q3ZCK8
            OMA:MRYEGNE OrthoDB:EOG49ZXQX NextBio:20899292 InterPro:IPR018793
            Pfam:PF10203 Uniprot:Q3ZCK8
        Length = 74

 Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
 Identities = 20/53 (37%), Positives = 29/53 (54%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKR 56
             +C G+  +L  CL +SDCV  E +S R+C  E        C  L+ ++F CKR
Sbjct:    13 ACAGVKEDLGLCLLQSDCVLKEGKSPRQCLKE------GNCKALKYSFFECKR 59


>UNIPROTKB|Q86WW8 [details] [associations]
            symbol:COA5 "Cytochrome c oxidase assembly factor 5"
            species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
            evidence=IEA] GO:GO:0005739 EMBL:CH471127 Orphanet:70474 CTD:493753
            eggNOG:NOG284465 HOVERGEN:HBG107093 OMA:MRYEGNE OrthoDB:EOG49ZXQX
            InterPro:IPR018793 Pfam:PF10203 EMBL:AC010134 EMBL:BC047722
            IPI:IPI00400948 RefSeq:NP_001008216.1 UniGene:Hs.596537
            ProteinModelPortal:Q86WW8 DMDM:74727729 PaxDb:Q86WW8
            PeptideAtlas:Q86WW8 PRIDE:Q86WW8 DNASU:493753
            Ensembl:ENST00000328709 GeneID:493753 KEGG:hsa:493753
            UCSC:uc002syz.3 GeneCards:GC02M099216 HGNC:HGNC:33848 MIM:220110
            MIM:613920 neXtProt:NX_Q86WW8 Orphanet:254905 PharmGKB:PA162379390
            InParanoid:Q86WW8 PhylomeDB:Q86WW8 GenomeRNAi:493753 NextBio:111737
            ArrayExpress:Q86WW8 Bgee:Q86WW8 CleanEx:HS_C2orf64
            Genevestigator:Q86WW8 Uniprot:Q86WW8
        Length = 74

 Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
 Identities = 21/53 (39%), Positives = 28/53 (52%)

Query:     4 SCKGLAMELVKCLSESDCVKVEKRSFRECAGEKSPCIPSECVGLRETYFNCKR 56
             +C GL  +L  CL +SDCV  E +S R+C  E        C  L+  +F CKR
Sbjct:    13 ACAGLKEDLGACLLQSDCVVQEGKSPRQCLKE------GYCNSLKYAFFECKR 59


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.135   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       80        80   0.00091  102 3  11 22  0.50    28
                                                     29  0.41    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  539 (57 KB)
  Total size of DFA:  107 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.40u 0.25s 9.65t   Elapsed:  00:00:01
  Total cpu time:  9.40u 0.25s 9.65t   Elapsed:  00:00:01
  Start:  Fri May 10 03:12:57 2013   End:  Fri May 10 03:12:58 2013

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